Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:10:36 (3160388): wrapper (7.7.26015): starting
15:10:36 (3160388): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 15:10:36] Arguments: --nthreads 12
[2025-07-27 15:10:36] Threads: 12
[2025-07-27 15:10:36] Checking for CVMFS
[2025-07-27 15:10:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 15:10:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 15:10:36] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 15:10:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 15:10:36] 2.13.1.0 95439 8717 101608 148812 2 57 2611396 4097025 0 130560 0 7218982 99.990 327444 6296 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-07-27 15:10:36] CVMFS is ok
[2025-07-27 15:10:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 15:10:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 15:10:36] Further information can be found at the LHC@home message board.
[2025-07-27 15:10:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 15:10:36] Checking for apptainer binary...
[2025-07-27 15:10:36] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-07-27 15:10:36] apptainer is not installed, using version from CVMFS
[2025-07-27 15:10:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 15:10:36] pckelar5.cern.ch
[2025-07-27 15:10:36] apptainer works
[2025-07-27 15:10:37] Set ATHENA_PROC_NUMBER=12
[2025-07-27 15:10:37] Set ATHENA_CORE_NUMBER=12
[2025-07-27 15:10:37] Starting ATLAS job with PandaID=6745965831
[2025-07-27 15:10:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 16:37:19]  *** The last 200 lines of the pilot log: ***
[2025-07-27 16:37:19]  is_altstaged=None
[2025-07-27 16:37:19]  is_tar=False
[2025-07-27 16:37:19]  lfn=log.45758829._000042.job.log.tgz.1
[2025-07-27 16:37:19]  mtime=0
[2025-07-27 16:37:19]  protocol_id=None
[2025-07-27 16:37:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 16:37:19]  replicas=None
[2025-07-27 16:37:19]  scope=mc23_13p6TeV
[2025-07-27 16:37:19]  status=None
[2025-07-27 16:37:19]  status_code=0
[2025-07-27 16:37:19]  storage_token=
[2025-07-27 16:37:19]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6745965831/log.45758829._000042.job.log.tgz.1
[2025-07-27 16:37:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b2/66/log.45758829._000042.job.log.tgz.1
[2025-07-27 16:37:19]  workdir=None
[2025-07-27 16:37:19] ]
[2025-07-27 16:37:19] 2025-07-27 14:36:41,646 | INFO     | transferring file log.45758829._000042.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6745965831/log.45758829._000042.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-27 16:37:19] 2025-07-27 14:36:41,647 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6745965831/log.45758829._000042.job.log.tgz.1 /var/lib/boinc/slots/0/log.45758829._000042.job
[2025-07-27 16:37:19] 2025-07-27 14:36:41,662 | INFO     | adding to output.list: log.45758829._000042.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b2/66/log.45758829._000042.job.log.tg
[2025-07-27 16:37:19] 2025-07-27 14:36:41,663 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 16:37:19] 2025-07-27 14:36:41,663 | INFO     | summary of transferred files:
[2025-07-27 16:37:19] 2025-07-27 14:36:41,663 | INFO     |  -- lfn=log.45758829._000042.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 16:37:19] 2025-07-27 14:36:41,663 | INFO     | stage-out finished correctly
[2025-07-27 16:37:19] 2025-07-27 14:36:42,916 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 16:37:19] 2025-07-27 14:36:42,981 | INFO     | job 6745965831 has state=finished
[2025-07-27 16:37:19] 2025-07-27 14:36:42,981 | INFO     | preparing for final server update for job 6745965831 in state='finished'
[2025-07-27 16:37:19] 2025-07-27 14:36:42,982 | INFO     | this job has now completed (state=finished)
[2025-07-27 16:37:19] 2025-07-27 14:36:42,982 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 16:37:19] 2025-07-27 14:36:42,982 | INFO     | log transfer has been attempted: DONE
[2025-07-27 16:37:19] 2025-07-27 14:36:42,982 | INFO     | job 6745965831 has finished - writing final server update
[2025-07-27 16:37:19] 2025-07-27 14:36:42,982 | INFO     | total number of processed events: 400 (read)
[2025-07-27 16:37:19] 2025-07-27 14:36:42,984 | INFO     | executing command: lscpu
[2025-07-27 16:37:19] 2025-07-27 14:36:43,003 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 16:37:19] 2025-07-27 14:36:43,409 | WARNING  | process 3171192 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 16:37:19] 2025-07-27 14:36:43,409 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6745965831/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 16:37:19] 2025-07-27 14:36:43,484 | INFO     | number of running child processes to parent process 3171192: 1
[2025-07-27 16:37:19] 2025-07-27 14:36:43,485 | INFO     | maximum number of monitored processes: 6
[2025-07-27 16:37:19] 2025-07-27 14:36:45,988 | INFO     | monitor loop #382: job 0:6745965831 is in state 'finished'
[2025-07-27 16:37:19] 2025-07-27 14:36:45,988 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:37:19] 2025-07-27 14:36:47,196 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 16:37:19] 2025-07-27 14:36:47,198 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2231.7659166666667
[2025-07-27 16:37:19] 2025-07-27 14:36:47,199 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6745965831/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 16:37:19] 2025-07-27 14:36:47,200 | INFO     | extracted standard info from prmon json
[2025-07-27 16:37:19] 2025-07-27 14:36:47,200 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 16:37:19] 2025-07-27 14:36:47,200 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 16:37:19] 2025-07-27 14:36:47,200 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 16:37:19] 2025-07-27 14:36:47,200 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 16:37:19] 2025-07-27 14:36:47,202 | INFO     | fitting pss+swap vs Time
[2025-07-27 16:37:19] 2025-07-27 14:36:47,202 | INFO     | sum of square deviations: 147126479.5
[2025-07-27 16:37:19] 2025-07-27 14:36:47,203 | INFO     | sum of deviations: -2322420182.0
[2025-07-27 16:37:19] 2025-07-27 14:36:47,203 | INFO     | mean x: 1753624519.5
[2025-07-27 16:37:19] 2025-07-27 14:36:47,203 | INFO     | mean y: 2827607.846153846
[2025-07-27 16:37:19] 2025-07-27 14:36:47,203 | INFO     | -- intersect: 27684132764.99737
[2025-07-27 16:37:19] 2025-07-27 14:36:47,203 | INFO     | intersect: 27684132764.99737
[2025-07-27 16:37:19] 2025-07-27 14:36:47,203 | INFO     | chi2: 0.05932223755903758
[2025-07-27 16:37:19] 2025-07-27 14:36:47,203 | INFO     | -- intersect: 27684132764.99737
[2025-07-27 16:37:19] 2025-07-27 14:36:47,204 | INFO     | current memory leak: -15.79 B/s (using 78 data points, chi2=0.06)
[2025-07-27 16:37:19] 2025-07-27 14:36:47,204 | INFO     | could have reported an average CPU frequency of 2496 MHz (6 samples)
[2025-07-27 16:37:19] 2025-07-27 14:36:47,204 | INFO     | ..............................
[2025-07-27 16:37:19] 2025-07-27 14:36:47,204 | INFO     | . Timing measurements:
[2025-07-27 16:37:19] 2025-07-27 14:36:47,204 | INFO     | . get job = 0 s
[2025-07-27 16:37:19] 2025-07-27 14:36:47,204 | INFO     | . initial setup = 1 s
[2025-07-27 16:37:19] 2025-07-27 14:36:47,204 | INFO     | . payload setup = 5 s
[2025-07-27 16:37:19] 2025-07-27 14:36:47,204 | INFO     | . stage-in = 0 s
[2025-07-27 16:37:19] 2025-07-27 14:36:47,204 | INFO     | . payload execution = 5133 s
[2025-07-27 16:37:19] 2025-07-27 14:36:47,205 | INFO     | . stage-out = 0 s
[2025-07-27 16:37:19] 2025-07-27 14:36:47,205 | INFO     | . log creation = 0 s
[2025-07-27 16:37:19] 2025-07-27 14:36:47,205 | INFO     | ..............................
[2025-07-27 16:37:19] 2025-07-27 14:36:47,273 | INFO     | 
[2025-07-27 16:37:19] 2025-07-27 14:36:47,273 | INFO     | job summary report
[2025-07-27 16:37:19] 2025-07-27 14:36:47,273 | INFO     | --------------------------------------------------
[2025-07-27 16:37:19] 2025-07-27 14:36:47,274 | INFO     | PanDA job id: 6745965831
[2025-07-27 16:37:19] 2025-07-27 14:36:47,274 | INFO     | task id: 45758829
[2025-07-27 16:37:19] 2025-07-27 14:36:47,274 | INFO     | errors: (none)
[2025-07-27 16:37:19] 2025-07-27 14:36:47,274 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 16:37:19] 2025-07-27 14:36:47,274 | INFO     | pilot state: finished 
[2025-07-27 16:37:19] 2025-07-27 14:36:47,274 | INFO     | transexitcode: 0
[2025-07-27 16:37:19] 2025-07-27 14:36:47,274 | INFO     | exeerrorcode: 0
[2025-07-27 16:37:19] 2025-07-27 14:36:47,274 | INFO     | exeerrordiag: 
[2025-07-27 16:37:19] 2025-07-27 14:36:47,274 | INFO     | exitcode: 0
[2025-07-27 16:37:19] 2025-07-27 14:36:47,274 | INFO     | exitmsg: OK
[2025-07-27 16:37:19] 2025-07-27 14:36:47,274 | INFO     | cpuconsumptiontime: 56112 s
[2025-07-27 16:37:19] 2025-07-27 14:36:47,274 | INFO     | nevents: 400
[2025-07-27 16:37:19] 2025-07-27 14:36:47,274 | INFO     | neventsw: 0
[2025-07-27 16:37:19] 2025-07-27 14:36:47,275 | INFO     | pid: 3171192
[2025-07-27 16:37:19] 2025-07-27 14:36:47,275 | INFO     | pgrp: 3171192
[2025-07-27 16:37:19] 2025-07-27 14:36:47,275 | INFO     | corecount: 12
[2025-07-27 16:37:19] 2025-07-27 14:36:47,275 | INFO     | event service: False
[2025-07-27 16:37:19] 2025-07-27 14:36:47,275 | INFO     | sizes: {0: 2397461, 3: 2397723, 11: 2397751, 5143: 2424152, 5144: 2433150, 5146: 2433206, 5150: 2433528}
[2025-07-27 16:37:19] 2025-07-27 14:36:47,275 | INFO     | --------------------------------------------------
[2025-07-27 16:37:19] 2025-07-27 14:36:47,275 | INFO     | 
[2025-07-27 16:37:19] 2025-07-27 14:36:47,275 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-27 16:37:19] 2025-07-27 14:36:47,294 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 16:37:19] 2025-07-27 14:36:47,294 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 16:37:19] 2025-07-27 14:36:47,294 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 16:37:19] 2025-07-27 14:36:47,294 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 16:37:19] 2025-07-27 14:36:47,294 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 16:37:19] 2025-07-27 14:36:47,295 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 16:37:19] 2025-07-27 14:36:47,295 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 16:37:19] 2025-07-27 14:36:47,295 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 16:37:19] 2025-07-27 14:36:47,295 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 16:37:19] 2025-07-27 14:36:47,295 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 16:37:19] 2025-07-27 14:36:47,295 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 16:37:19] 2025-07-27 14:36:47,295 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 16:37:19] 2025-07-27 14:36:47,295 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 16:37:19] 2025-07-27 14:36:47,295 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 16:37:19] 2025-07-27 14:36:47,295 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 16:37:19] 2025-07-27 14:36:47,295 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 16:37:19] 2025-07-27 14:36:47,296 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 16:37:19] 2025-07-27 14:36:47,296 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 16:37:19] 2025-07-27 14:36:47,296 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 16:37:19] 2025-07-27 14:36:47,296 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 16:37:19] 2025-07-27 14:36:47,296 | INFO     | job 6745965831 has completed (purged errors)
[2025-07-27 16:37:19] 2025-07-27 14:36:47,296 | INFO     | overall cleanup function is called
[2025-07-27 16:37:19] 2025-07-27 14:36:48,303 | INFO     | --- collectZombieJob: --- 10, [3171192]
[2025-07-27 16:37:19] 2025-07-27 14:36:48,303 | INFO     | zombie collector waiting for pid 3171192
[2025-07-27 16:37:19] 2025-07-27 14:36:48,303 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 16:37:19] 2025-07-27 14:36:48,303 | INFO     | collected zombie processes
[2025-07-27 16:37:19] 2025-07-27 14:36:48,303 | INFO     | will attempt to kill all subprocesses of pid=3171192
[2025-07-27 16:37:19] 2025-07-27 14:36:48,378 | INFO     | process IDs to be killed: [3171192] (in reverse order)
[2025-07-27 16:37:19] 2025-07-27 14:36:48,413 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 16:37:19] 2025-07-27 14:36:48,413 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 16:37:19] 2025-07-27 14:36:48,415 | INFO     | did not find any defunct processes belonging to 3171192
[2025-07-27 16:37:19] 2025-07-27 14:36:48,417 | INFO     | did not find any defunct processes belonging to 3171192
[2025-07-27 16:37:19] 2025-07-27 14:36:48,417 | INFO     | ready for new job
[2025-07-27 16:37:19] 2025-07-27 14:36:48,417 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 16:37:19] 2025-07-27 14:36:48,418 | INFO     | ***************************************
[2025-07-27 16:37:19] 2025-07-27 14:36:48,418 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 16:37:19] 2025-07-27 14:36:48,418 | INFO     | ***************************************
[2025-07-27 16:37:19] 2025-07-27 14:36:48,419 | INFO     | 
[2025-07-27 16:37:19] 2025-07-27 14:36:48,419 | INFO     | architecture information:
[2025-07-27 16:37:19] 2025-07-27 14:36:48,419 | INFO     | executing command: cat /etc/os-release
[2025-07-27 16:37:19] 2025-07-27 14:36:48,430 | INFO     | cat /etc/os-release:
[2025-07-27 16:37:19] NAME="CentOS Linux"
[2025-07-27 16:37:19] VERSION="7 (Core)"
[2025-07-27 16:37:19] ID="centos"
[2025-07-27 16:37:19] ID_LIKE="rhel fedora"
[2025-07-27 16:37:19] VERSION_ID="7"
[2025-07-27 16:37:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 16:37:19] ANSI_COLOR="0;31"
[2025-07-27 16:37:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 16:37:19] HOME_URL="https://www.centos.org/"
[2025-07-27 16:37:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 16:37:19] 
[2025-07-27 16:37:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 16:37:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 16:37:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 16:37:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 16:37:19] 
[2025-07-27 16:37:19] 2025-07-27 14:36:48,430 | INFO     | ***************************************
[2025-07-27 16:37:19] 2025-07-27 14:36:48,933 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-27 16:37:19] 2025-07-27 14:36:48,947 | INFO     | sufficient remaining disk space (1817256656896 B)
[2025-07-27 16:37:19] 2025-07-27 14:36:48,947 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 16:37:19] 2025-07-27 14:36:48,947 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 16:37:19] 2025-07-27 14:36:48,947 | INFO     | update_server=False
[2025-07-27 16:37:19] 2025-07-27 14:36:48,947 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 16:37:19] 2025-07-27 14:36:48,948 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:37:19] 2025-07-27 14:36:48,987 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 16:37:19] 2025-07-27 14:36:49,391 | INFO     | all payload control threads have been joined
[2025-07-27 16:37:19] 2025-07-27 14:36:49,496 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:37:19] 2025-07-27 14:36:49,496 | INFO     | aborting loop
[2025-07-27 16:37:19] 2025-07-27 14:36:49,727 | INFO     | all data control threads have been joined
[2025-07-27 16:37:19] 2025-07-27 14:36:49,747 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 16:37:19] 2025-07-27 14:36:49,953 | INFO     | [job] retrieve thread has finished
[2025-07-27 16:37:19] 2025-07-27 14:36:49,953 | INFO     | [job] queue monitor thread has finished
[2025-07-27 16:37:19] 2025-07-27 14:36:49,955 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 16:37:19] 2025-07-27 14:36:50,012 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 16:37:19] 2025-07-27 14:36:50,108 | INFO     | [data] copytool_in thread has finished
[2025-07-27 16:37:19] 2025-07-27 14:36:50,119 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 16:37:19] 2025-07-27 14:36:50,157 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 16:37:19] 2025-07-27 14:36:50,396 | INFO     | [payload] control thread has finished
[2025-07-27 16:37:19] 2025-07-27 14:36:50,501 | INFO     | [job] job monitor thread has finished
[2025-07-27 16:37:19] 2025-07-27 14:36:50,617 | INFO     | [payload] validate_post thread has finished
[2025-07-27 16:37:19] 2025-07-27 14:36:50,650 | INFO     | all job control threads have been joined
[2025-07-27 16:37:19] 2025-07-27 14:36:50,733 | INFO     | [data] control thread has finished
[2025-07-27 16:37:19] 2025-07-27 14:36:50,945 | INFO     | [payload] failed_post thread has finished
[2025-07-27 16:37:19] 2025-07-27 14:36:51,128 | INFO     | [job] validate thread has finished
[2025-07-27 16:37:19] 2025-07-27 14:36:51,655 | INFO     | [job] control thread has finished
[2025-07-27 16:37:19] 2025-07-27 14:36:51,753 | INFO     | [data] copytool_out thread has finished
[2025-07-27 16:37:19] 2025-07-27 14:36:52,993 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 16:37:19] 2025-07-27 14:36:54,226 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140328691119936)>', '<ExcThread(monitor, started 140328157820672)>']
[2025-07-27 16:37:19] 2025-07-27 14:36:59,252 | INFO     | all workflow threads have been joined
[2025-07-27 16:37:19] 2025-07-27 14:36:59,252 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 16:37:19] 2025-07-27 14:36:59,252 | INFO     | traces error code: 0
[2025-07-27 16:37:19] 2025-07-27 14:36:59,252 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 16:37:19] 2025-07-27 14:37:18,893 | INFO     | PID=3164067 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 16:37:19] 2025-07-27 14:37:18,894 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 16:37:19] 2025-07-27 14:37:18,894 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 16:37:19] 2025-07-27 14:37:18,894 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 16:37:19] 2025-07-27 14:37:18,894 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 16:37:19] 2025-07-27 14:37:18,894 | INFO     | [monitor] control thread has ended
[2025-07-27 16:37:19] 2025-07-27 14:37:18,965 [wrapper] ==== pilot stdout END ====
[2025-07-27 16:37:19] 2025-07-27 14:37:18,968 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 16:37:19] 2025-07-27 14:37:18,970 [wrapper] pilotpid: 3164067
[2025-07-27 16:37:19] 2025-07-27 14:37:18,973 [wrapper] Pilot exit status: 0
[2025-07-27 16:37:19] 2025-07-27 14:37:18,982 [wrapper] pandaids: 6745965831
[2025-07-27 16:37:19] 2025-07-27 14:37:19,001 [wrapper] cleanup supervisor_pilot 3187653 3164068
[2025-07-27 16:37:19] 2025-07-27 14:37:19,003 [wrapper] Test setup, not cleaning
[2025-07-27 16:37:19] 2025-07-27 14:37:19,005 [wrapper] apfmon messages muted
[2025-07-27 16:37:19] 2025-07-27 14:37:19,007 [wrapper] ==== wrapper stdout END ====
[2025-07-27 16:37:19] 2025-07-27 14:37:19,009 [wrapper] ==== wrapper stderr END ====
[2025-07-27 16:37:19]  *** Error codes and diagnostics ***
[2025-07-27 16:37:19]     "exeErrorCode": 0,
[2025-07-27 16:37:19]     "exeErrorDiag": "",
[2025-07-27 16:37:19]     "pilotErrorCode": 0,
[2025-07-27 16:37:19]     "pilotErrorDiag": "",
[2025-07-27 16:37:19]  *** Listing of results directory ***
[2025-07-27 16:37:19] total 405884
[2025-07-27 16:37:19] -rw-r--r-- 1 boinc boinc    530466 Jul 27 04:22 pilot3.tar.gz
[2025-07-27 16:37:19] -rw-r--r-- 1 boinc boinc      5112 Jul 27 04:28 queuedata.json
[2025-07-27 16:37:19] -rwx------ 1 boinc boinc     36292 Jul 27 04:28 runpilot2-wrapper.sh
[2025-07-27 16:37:19] -rw-r--r-- 1 boinc boinc       100 Jul 27 15:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 16:37:19] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 15:10 run_atlas
[2025-07-27 16:37:19] -rw-r--r-- 1 boinc boinc       105 Jul 27 15:10 job.xml
[2025-07-27 16:37:19] -rw-r--r-- 2 boinc boinc 244833535 Jul 27 15:10 EVNT.45758827._000002.pool.root.1
[2025-07-27 16:37:19] -rw-r--r-- 2 boinc boinc     15095 Jul 27 15:10 start_atlas.sh
[2025-07-27 16:37:19] drwxrwx--x 2 boinc boinc        68 Jul 27 15:10 shared
[2025-07-27 16:37:19] -rw-r--r-- 2 boinc boinc    542874 Jul 27 15:10 input.tar.gz
[2025-07-27 16:37:19] -rw-r--r-- 1 boinc boinc      6294 Jul 27 15:10 init_data.xml
[2025-07-27 16:37:19] -rw-r--r-- 1 boinc boinc         0 Jul 27 15:10 boinc_lockfile
[2025-07-27 16:37:19] -rw-r--r-- 1 boinc boinc      2554 Jul 27 15:10 pandaJob.out
[2025-07-27 16:37:19] -rw------- 1 boinc boinc    980117 Jul 27 15:10 agis_schedconf.cvmfs.json
[2025-07-27 16:37:19] -rw------- 1 boinc boinc   1593052 Jul 27 15:10 agis_ddmendpoints.agis.ALL.json
[2025-07-27 16:37:19] drwx------ 4 boinc boinc      4096 Jul 27 15:10 pilot3
[2025-07-27 16:37:19] -rw------- 1 boinc boinc 165214534 Jul 27 16:36 HITS.45758829._000042.pool.root.1
[2025-07-27 16:37:19] -rw-r--r-- 1 boinc boinc       529 Jul 27 16:36 boinc_task_state.xml
[2025-07-27 16:37:19] -rw------- 1 boinc boinc      1017 Jul 27 16:36 memory_monitor_summary.json
[2025-07-27 16:37:19] -rw------- 1 boinc boinc    370826 Jul 27 16:36 log.45758829._000042.job.log.tgz.1
[2025-07-27 16:37:19] -rw------- 1 boinc boinc        95 Jul 27 16:36 pilot_heartbeat.json
[2025-07-27 16:37:19] -rw------- 1 boinc boinc      7776 Jul 27 16:36 heartbeat.json
[2025-07-27 16:37:19] -rw-r--r-- 1 boinc boinc      8192 Jul 27 16:36 boinc_mmap_file
[2025-07-27 16:37:19] -rw-r--r-- 1 boinc boinc        27 Jul 27 16:36 wrapper_checkpoint.txt
[2025-07-27 16:37:19] -rw------- 1 boinc boinc       747 Jul 27 16:37 pilotlog.txt
[2025-07-27 16:37:19] -rw------- 1 boinc boinc    487264 Jul 27 16:37 log.45758829._000042.job.log.1
[2025-07-27 16:37:19] -rw------- 1 boinc boinc       357 Jul 27 16:37 output.list
[2025-07-27 16:37:19] -rw-r--r-- 1 boinc boinc       620 Jul 27 16:37 runtime_log
[2025-07-27 16:37:19] -rw------- 1 boinc boinc    880640 Jul 27 16:37 result.tar.gz
[2025-07-27 16:37:19] -rw-r--r-- 1 boinc boinc      8684 Jul 27 16:37 runtime_log.err
[2025-07-27 16:37:19] -rw------- 1 boinc boinc       656 Jul 27 16:37 KjpNDmwI6z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmpn1KDmt28Okn.diag
[2025-07-27 16:37:19] -rw-r--r-- 1 boinc boinc     21635 Jul 27 16:37 stderr.txt
[2025-07-27 16:37:19] HITS file was successfully produced:
[2025-07-27 16:37:19] -rw------- 1 boinc boinc 165214534 Jul 27 16:36 shared/HITS.pool.root.1
[2025-07-27 16:37:19]  *** Contents of shared directory: ***
[2025-07-27 16:37:19] total 401848
[2025-07-27 16:37:19] -rw-r--r-- 2 boinc boinc 244833535 Jul 27 15:10 ATLAS.root_0
[2025-07-27 16:37:19] -rw-r--r-- 2 boinc boinc     15095 Jul 27 15:10 start_atlas.sh
[2025-07-27 16:37:19] -rw-r--r-- 2 boinc boinc    542874 Jul 27 15:10 input.tar.gz
[2025-07-27 16:37:19] -rw------- 1 boinc boinc 165214534 Jul 27 16:36 HITS.pool.root.1
[2025-07-27 16:37:19] -rw------- 1 boinc boinc    880640 Jul 27 16:37 result.tar.gz
16:37:20 (3160388): run_atlas exited; CPU time 56152.816168
16:37:20 (3160388): called boinc_finish(0)

</stderr_txt>
]]>

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