Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
02:18:49 (2146983): wrapper (7.7.26015): starting
02:18:49 (2146983): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 02:18:49] Arguments: --nthreads 12
[2025-07-28 02:18:49] Threads: 12
[2025-07-28 02:18:49] Checking for CVMFS
[2025-07-28 02:18:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 02:18:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 02:18:49] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 02:18:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 02:18:49] 2.13.1.0 50093 8463 75860 148832 3 187 3501776 4096001 1264 130560 0 17055853 99.996 308442 288 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-28 02:18:49] CVMFS is ok
[2025-07-28 02:18:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 02:18:49] Checking for apptainer binary...
[2025-07-28 02:18:49] apptainer is not installed, using version from CVMFS
[2025-07-28 02:18:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 02:18:49] ryzen7
[2025-07-28 02:18:49] apptainer works
[2025-07-28 02:18:49] Set ATHENA_PROC_NUMBER=12
[2025-07-28 02:18:49] Set ATHENA_CORE_NUMBER=12
[2025-07-28 02:18:49] Starting ATLAS job with PandaID=6745950258
[2025-07-28 02:18:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 03:55:22]  *** The last 200 lines of the pilot log: ***
[2025-07-28 03:55:22]  status=None
[2025-07-28 03:55:22]  status_code=0
[2025-07-28 03:55:22]  storage_token=
[2025-07-28 03:55:22]  surl=/opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6745950258/log.45759738._000029.job.log.tgz.1
[2025-07-28 03:55:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9d/b4/log.45759738._000029.job.log.tgz.1
[2025-07-28 03:55:22]  workdir=None
[2025-07-28 03:55:22] ]
[2025-07-28 03:55:22] 2025-07-28 03:54:45,159 | INFO     | transferring file log.45759738._000029.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6745950258/log.45759738._000029.job.log.tgz.1 t
[2025-07-28 03:55:22] 2025-07-28 03:54:45,159 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6745950258/log.45759738._000029.job.log.tgz.1 /opt/boinc/instance_home
[2025-07-28 03:55:22] 2025-07-28 03:54:45,168 | INFO     | adding to output.list: log.45759738._000029.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9d/b4/log.45759738._000029.job.log.tg
[2025-07-28 03:55:22] 2025-07-28 03:54:45,169 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-28 03:55:22] 2025-07-28 03:54:45,169 | INFO     | summary of transferred files:
[2025-07-28 03:55:22] 2025-07-28 03:54:45,169 | INFO     |  -- lfn=log.45759738._000029.job.log.tgz.1, status_code=0, status=transferred
[2025-07-28 03:55:22] 2025-07-28 03:54:45,169 | INFO     | stage-out finished correctly
[2025-07-28 03:55:22] 2025-07-28 03:54:45,307 | WARNING  | process 2157300 can no longer be monitored (due to stat problems) - aborting
[2025-07-28 03:55:22] 2025-07-28 03:54:45,307 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6745950258/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 03:55:22] 2025-07-28 03:54:45,360 | INFO     | number of running child processes to parent process 2157300: 1
[2025-07-28 03:55:22] 2025-07-28 03:54:45,360 | INFO     | maximum number of monitored processes: 6
[2025-07-28 03:55:22] 2025-07-28 03:54:47,862 | INFO     | monitor loop #424: job 0:6745950258 is in state 'finished'
[2025-07-28 03:55:22] 2025-07-28 03:54:47,863 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 03:55:22] 2025-07-28 03:54:48,024 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-28 03:55:22] 2025-07-28 03:54:48,481 | INFO     | PID=2150698 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 03:55:22] 2025-07-28 03:54:48,483 | INFO     | .. there are 3 such processes running
[2025-07-28 03:55:22] 2025-07-28 03:54:48,792 | INFO     | job 6745950258 has state=finished
[2025-07-28 03:55:22] 2025-07-28 03:54:48,792 | INFO     | preparing for final server update for job 6745950258 in state='finished'
[2025-07-28 03:55:22] 2025-07-28 03:54:48,792 | INFO     | this job has now completed (state=finished)
[2025-07-28 03:55:22] 2025-07-28 03:54:48,792 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-28 03:55:22] 2025-07-28 03:54:48,792 | INFO     | log transfer has been attempted: DONE
[2025-07-28 03:55:22] 2025-07-28 03:54:48,792 | INFO     | job 6745950258 has finished - writing final server update
[2025-07-28 03:55:22] 2025-07-28 03:54:48,793 | INFO     | total number of processed events: 400 (read)
[2025-07-28 03:55:22] 2025-07-28 03:54:48,793 | INFO     | executing command: lscpu
[2025-07-28 03:55:22] 2025-07-28 03:54:48,826 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-28 03:55:22] 2025-07-28 03:54:50,365 | INFO     | monitor loop #425: job 0:6745950258 is in state 'finished'
[2025-07-28 03:55:22] 2025-07-28 03:54:50,365 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-28 03:55:22] 2025-07-28 03:54:50,857 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-28 03:55:22] 2025-07-28 03:54:50,859 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4094.2979375
[2025-07-28 03:55:22] 2025-07-28 03:54:50,861 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6745950258/memory_monitor_summary.json (trf name=prmon)
[2025-07-28 03:55:22] 2025-07-28 03:54:50,861 | INFO     | extracted standard info from prmon json
[2025-07-28 03:55:22] 2025-07-28 03:54:50,862 | INFO     | extracted standard memory fields from prmon json
[2025-07-28 03:55:22] 2025-07-28 03:54:50,862 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 03:55:22] 2025-07-28 03:54:50,862 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 03:55:22] 2025-07-28 03:54:50,862 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 03:55:22] 2025-07-28 03:54:50,863 | INFO     | fitting pss+swap vs Time
[2025-07-28 03:55:22] 2025-07-28 03:54:50,863 | INFO     | sum of square deviations: 204163828.0
[2025-07-28 03:55:22] 2025-07-28 03:54:50,864 | INFO     | sum of deviations: -7352935181.000002
[2025-07-28 03:55:22] 2025-07-28 03:54:50,864 | INFO     | mean x: 1753672083.0
[2025-07-28 03:55:22] 2025-07-28 03:54:50,864 | INFO     | mean y: 2769100.6091954024
[2025-07-28 03:55:22] 2025-07-28 03:54:50,864 | INFO     | -- intersect: 63161053706.38302
[2025-07-28 03:55:22] 2025-07-28 03:54:50,864 | INFO     | intersect: 63161053706.38302
[2025-07-28 03:55:22] 2025-07-28 03:54:50,864 | INFO     | chi2: 0.015702400538736064
[2025-07-28 03:55:22] 2025-07-28 03:54:50,864 | INFO     | -- intersect: 63161053706.38302
[2025-07-28 03:55:22] 2025-07-28 03:54:50,864 | INFO     | current memory leak: -36.01 B/s (using 87 data points, chi2=0.02)
[2025-07-28 03:55:22] 2025-07-28 03:54:50,864 | INFO     | could have reported an average CPU frequency of 4164 MHz (7 samples)
[2025-07-28 03:55:22] 2025-07-28 03:54:50,865 | INFO     | ..............................
[2025-07-28 03:55:22] 2025-07-28 03:54:50,865 | INFO     | . Timing measurements:
[2025-07-28 03:55:22] 2025-07-28 03:54:50,865 | INFO     | . get job = 0 s
[2025-07-28 03:55:22] 2025-07-28 03:54:50,865 | INFO     | . initial setup = 1 s
[2025-07-28 03:55:22] 2025-07-28 03:54:50,865 | INFO     | . payload setup = 3 s
[2025-07-28 03:55:22] 2025-07-28 03:54:50,865 | INFO     | . stage-in = 0 s
[2025-07-28 03:55:22] 2025-07-28 03:54:50,865 | INFO     | . payload execution = 5729 s
[2025-07-28 03:55:22] 2025-07-28 03:54:50,865 | INFO     | . stage-out = 0 s
[2025-07-28 03:55:22] 2025-07-28 03:54:50,865 | INFO     | . log creation = 0 s
[2025-07-28 03:55:22] 2025-07-28 03:54:50,865 | INFO     | ..............................
[2025-07-28 03:55:22] 2025-07-28 03:54:50,930 | INFO     | 
[2025-07-28 03:55:22] 2025-07-28 03:54:50,930 | INFO     | job summary report
[2025-07-28 03:55:22] 2025-07-28 03:54:50,930 | INFO     | --------------------------------------------------
[2025-07-28 03:55:22] 2025-07-28 03:54:50,930 | INFO     | PanDA job id: 6745950258
[2025-07-28 03:55:22] 2025-07-28 03:54:50,930 | INFO     | task id: 45759738
[2025-07-28 03:55:22] 2025-07-28 03:54:50,930 | INFO     | errors: (none)
[2025-07-28 03:55:22] 2025-07-28 03:54:50,930 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 03:55:22] 2025-07-28 03:54:50,930 | INFO     | pilot state: finished 
[2025-07-28 03:55:22] 2025-07-28 03:54:50,930 | INFO     | transexitcode: 0
[2025-07-28 03:55:22] 2025-07-28 03:54:50,930 | INFO     | exeerrorcode: 0
[2025-07-28 03:55:22] 2025-07-28 03:54:50,930 | INFO     | exeerrordiag: 
[2025-07-28 03:55:22] 2025-07-28 03:54:50,930 | INFO     | exitcode: 0
[2025-07-28 03:55:22] 2025-07-28 03:54:50,931 | INFO     | exitmsg: OK
[2025-07-28 03:55:22] 2025-07-28 03:54:50,931 | INFO     | cpuconsumptiontime: 32204 s
[2025-07-28 03:55:22] 2025-07-28 03:54:50,931 | INFO     | nevents: 400
[2025-07-28 03:55:22] 2025-07-28 03:54:50,931 | INFO     | neventsw: 0
[2025-07-28 03:55:22] 2025-07-28 03:54:50,931 | INFO     | pid: 2157300
[2025-07-28 03:55:22] 2025-07-28 03:54:50,931 | INFO     | pgrp: 2157300
[2025-07-28 03:55:22] 2025-07-28 03:54:50,931 | INFO     | corecount: 12
[2025-07-28 03:55:22] 2025-07-28 03:54:50,931 | INFO     | event service: False
[2025-07-28 03:55:22] 2025-07-28 03:54:50,931 | INFO     | sizes: {0: 2397484, 2: 2397746, 11: 2397774, 5736: 2424564, 5737: 2433608, 5740: 2433664, 5743: 2433986}
[2025-07-28 03:55:22] 2025-07-28 03:54:50,931 | INFO     | --------------------------------------------------
[2025-07-28 03:55:22] 2025-07-28 03:54:50,931 | INFO     | 
[2025-07-28 03:55:22] 2025-07-28 03:54:50,931 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-07-28 03:55:22] 2025-07-28 03:54:50,943 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 03:55:22] 2025-07-28 03:54:50,943 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 03:55:22] 2025-07-28 03:54:50,943 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 03:55:22] 2025-07-28 03:54:50,943 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 03:55:22] 2025-07-28 03:54:50,943 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 03:55:22] 2025-07-28 03:54:50,943 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 03:55:22] 2025-07-28 03:54:50,943 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 03:55:22] 2025-07-28 03:54:50,943 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 03:55:22] 2025-07-28 03:54:50,944 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 03:55:22] 2025-07-28 03:54:50,944 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 03:55:22] 2025-07-28 03:54:50,944 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 03:55:22] 2025-07-28 03:54:50,944 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 03:55:22] 2025-07-28 03:54:50,944 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 03:55:22] 2025-07-28 03:54:50,944 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 03:55:22] 2025-07-28 03:54:50,944 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 03:55:22] 2025-07-28 03:54:50,944 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 03:55:22] 2025-07-28 03:54:50,944 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 03:55:22] 2025-07-28 03:54:50,944 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 03:55:22] 2025-07-28 03:54:50,944 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 03:55:22] 2025-07-28 03:54:50,944 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 03:55:22] 2025-07-28 03:54:50,944 | INFO     | job 6745950258 has completed (purged errors)
[2025-07-28 03:55:22] 2025-07-28 03:54:50,944 | INFO     | overall cleanup function is called
[2025-07-28 03:55:22] 2025-07-28 03:54:51,952 | INFO     | --- collectZombieJob: --- 10, [2157300]
[2025-07-28 03:55:22] 2025-07-28 03:54:51,952 | INFO     | zombie collector waiting for pid 2157300
[2025-07-28 03:55:22] 2025-07-28 03:54:51,952 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 03:55:22] 2025-07-28 03:54:51,952 | INFO     | collected zombie processes
[2025-07-28 03:55:22] 2025-07-28 03:54:51,952 | INFO     | will attempt to kill all subprocesses of pid=2157300
[2025-07-28 03:55:22] 2025-07-28 03:54:52,023 | INFO     | process IDs to be killed: [2157300] (in reverse order)
[2025-07-28 03:55:22] 2025-07-28 03:54:52,052 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 03:55:22] 2025-07-28 03:54:52,052 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 03:55:22] 2025-07-28 03:54:52,054 | INFO     | did not find any defunct processes belonging to 2157300
[2025-07-28 03:55:22] 2025-07-28 03:54:52,056 | INFO     | did not find any defunct processes belonging to 2157300
[2025-07-28 03:55:22] 2025-07-28 03:54:52,056 | INFO     | ready for new job
[2025-07-28 03:55:22] 2025-07-28 03:54:52,056 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 03:55:22] 2025-07-28 03:54:52,057 | INFO     | ***************************************
[2025-07-28 03:55:22] 2025-07-28 03:54:52,057 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 03:55:22] 2025-07-28 03:54:52,057 | INFO     | ***************************************
[2025-07-28 03:55:22] 2025-07-28 03:54:52,057 | INFO     | 
[2025-07-28 03:55:22] 2025-07-28 03:54:52,075 | INFO     | architecture information:
[2025-07-28 03:55:22] 2025-07-28 03:54:52,075 | INFO     | executing command: cat /etc/os-release
[2025-07-28 03:55:22] 2025-07-28 03:54:52,082 | INFO     | cat /etc/os-release:
[2025-07-28 03:55:22] NAME="CentOS Linux"
[2025-07-28 03:55:22] VERSION="7 (Core)"
[2025-07-28 03:55:22] ID="centos"
[2025-07-28 03:55:22] ID_LIKE="rhel fedora"
[2025-07-28 03:55:22] VERSION_ID="7"
[2025-07-28 03:55:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 03:55:22] ANSI_COLOR="0;31"
[2025-07-28 03:55:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 03:55:22] HOME_URL="https://www.centos.org/"
[2025-07-28 03:55:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 03:55:22] 
[2025-07-28 03:55:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 03:55:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 03:55:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 03:55:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 03:55:22] 
[2025-07-28 03:55:22] 2025-07-28 03:54:52,082 | INFO     | ***************************************
[2025-07-28 03:55:22] 2025-07-28 03:54:52,585 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-07-28 03:55:22] 2025-07-28 03:54:52,595 | INFO     | sufficient remaining disk space (150631088128 B)
[2025-07-28 03:55:22] 2025-07-28 03:54:52,595 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 03:55:22] 2025-07-28 03:54:52,595 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 03:55:22] 2025-07-28 03:54:52,595 | INFO     | update_server=False
[2025-07-28 03:55:22] 2025-07-28 03:54:52,595 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 03:55:22] 2025-07-28 03:54:52,596 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 03:55:22] 2025-07-28 03:54:52,866 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 03:55:22] 2025-07-28 03:54:52,866 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 03:55:22] 2025-07-28 03:54:52,866 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 03:55:22] 2025-07-28 03:54:52,866 | INFO     | will abort loop
[2025-07-28 03:55:22] 2025-07-28 03:54:53,241 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 03:55:22] 2025-07-28 03:54:53,311 | INFO     | all job control threads have been joined
[2025-07-28 03:55:22] 2025-07-28 03:54:53,507 | INFO     | all data control threads have been joined
[2025-07-28 03:55:22] 2025-07-28 03:54:53,590 | INFO     | all payload control threads have been joined
[2025-07-28 03:55:22] 2025-07-28 03:54:53,597 | INFO     | [job] queue monitor thread has finished
[2025-07-28 03:55:22] 2025-07-28 03:54:53,601 | INFO     | [job] retrieve thread has finished
[2025-07-28 03:55:22] 2025-07-28 03:54:53,766 | INFO     | [payload] validate_post thread has finished
[2025-07-28 03:55:22] 2025-07-28 03:54:53,870 | INFO     | [job] job monitor thread has finished
[2025-07-28 03:55:22] 2025-07-28 03:54:53,978 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 03:55:22] 2025-07-28 03:54:54,090 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 03:55:22] 2025-07-28 03:54:54,316 | INFO     | [job] control thread has finished
[2025-07-28 03:55:22] 2025-07-28 03:54:54,514 | INFO     | [data] control thread has finished
[2025-07-28 03:55:22] 2025-07-28 03:54:54,594 | INFO     | [payload] control thread has finished
[2025-07-28 03:55:22] 2025-07-28 03:54:54,598 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 03:55:22] 2025-07-28 03:54:54,603 | INFO     | [data] copytool_in thread has finished
[2025-07-28 03:55:22] 2025-07-28 03:54:54,603 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 03:55:22] 2025-07-28 03:54:54,787 | INFO     | [job] validate thread has finished
[2025-07-28 03:55:22] 2025-07-28 03:54:54,890 | INFO     | [payload] failed_post thread has finished
[2025-07-28 03:55:22] 2025-07-28 03:54:55,246 | INFO     | [data] copytool_out thread has finished
[2025-07-28 03:55:22] 2025-07-28 03:54:58,094 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 03:55:22] 2025-07-28 03:55:02,752 | INFO     | job.realtimelogging is not enabled
[2025-07-28 03:55:22] 2025-07-28 03:55:03,754 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 03:55:22] 2025-07-28 03:55:04,050 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140562086942528)>', '<ExcThread(monitor, started 140561520518912)>']
[2025-07-28 03:55:22] 2025-07-28 03:55:09,076 | INFO     | all workflow threads have been joined
[2025-07-28 03:55:22] 2025-07-28 03:55:09,076 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 03:55:22] 2025-07-28 03:55:09,076 | INFO     | traces error code: 0
[2025-07-28 03:55:22] 2025-07-28 03:55:09,076 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 03:55:22] 2025-07-28 03:55:22,604 | INFO     | PID=2150698 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-28 03:55:22] 2025-07-28 03:55:22,604 | INFO     | .. there are 3 such processes running
[2025-07-28 03:55:22] 2025-07-28 03:55:22,605 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 03:55:22] 2025-07-28 03:55:22,605 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 03:55:22] 2025-07-28 03:55:22,605 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 03:55:22] 2025-07-28 03:55:22,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 03:55:22] 2025-07-28 03:55:22,605 | INFO     | [monitor] control thread has ended
[2025-07-28 03:55:22] 2025-07-28 03:55:22,656 [wrapper] ==== pilot stdout END ====
[2025-07-28 03:55:22] 2025-07-28 03:55:22,658 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 03:55:22] 2025-07-28 03:55:22,660 [wrapper] pilotpid: 2150698
[2025-07-28 03:55:22] 2025-07-28 03:55:22,661 [wrapper] Pilot exit status: 0
[2025-07-28 03:55:22] 2025-07-28 03:55:22,667 [wrapper] pandaids: 6745950258
[2025-07-28 03:55:22] 2025-07-28 03:55:22,685 [wrapper] cleanup supervisor_pilot 2201450 2150699
[2025-07-28 03:55:22] 2025-07-28 03:55:22,687 [wrapper] Test setup, not cleaning
[2025-07-28 03:55:22] 2025-07-28 03:55:22,689 [wrapper] apfmon messages muted
[2025-07-28 03:55:22] 2025-07-28 03:55:22,690 [wrapper] ==== wrapper stdout END ====
[2025-07-28 03:55:22] 2025-07-28 03:55:22,691 [wrapper] ==== wrapper stderr END ====
[2025-07-28 03:55:22]  *** Error codes and diagnostics ***
[2025-07-28 03:55:22]     "exeErrorCode": 0,
[2025-07-28 03:55:22]     "exeErrorDiag": "",
[2025-07-28 03:55:22]     "pilotErrorCode": 0,
[2025-07-28 03:55:22]     "pilotErrorDiag": "",
[2025-07-28 03:55:22]  *** Listing of results directory ***
[2025-07-28 03:55:22] total 412184
[2025-07-28 03:55:22] -rw-r--r-- 1 boinc boinc    530466 Jul 27 01:40 pilot3.tar.gz
[2025-07-28 03:55:22] -rw-r--r-- 1 boinc boinc      5112 Jul 27 02:14 queuedata.json
[2025-07-28 03:55:22] -rwx------ 1 boinc boinc     36292 Jul 27 02:15 runpilot2-wrapper.sh
[2025-07-28 03:55:22] -rw-rw-r-- 1 boinc boinc       100 Jul 28 02:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 03:55:22] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 02:18 run_atlas
[2025-07-28 03:55:22] -rw-rw-r-- 1 boinc boinc       105 Jul 28 02:18 job.xml
[2025-07-28 03:55:22] -rw-r--r-- 2 boinc boinc     15095 Jul 28 02:18 start_atlas.sh
[2025-07-28 03:55:22] drwxrwx--x 2 boinc boinc      4096 Jul 28 02:18 shared
[2025-07-28 03:55:22] -rw-r--r-- 2 boinc boinc    542882 Jul 28 02:18 input.tar.gz
[2025-07-28 03:55:22] -rw-rw-r-- 1 boinc boinc      9702 Jul 28 02:18 init_data.xml
[2025-07-28 03:55:22] -rw-r--r-- 2 boinc boinc 241550743 Jul 28 02:18 EVNT.45759733._000002.pool.root.1
[2025-07-28 03:55:22] -rw-rw-r-- 1 boinc boinc         0 Jul 28 02:18 boinc_lockfile
[2025-07-28 03:55:22] -rw-rw-r-- 1 boinc boinc      2554 Jul 28 02:18 pandaJob.out
[2025-07-28 03:55:22] -rw------- 1 boinc boinc    980125 Jul 28 02:18 agis_schedconf.cvmfs.json
[2025-07-28 03:55:22] -rw------- 1 boinc boinc   1593052 Jul 28 02:18 agis_ddmendpoints.agis.ALL.json
[2025-07-28 03:55:22] drwx------ 4 boinc boinc      4096 Jul 28 02:18 pilot3
[2025-07-28 03:55:22] -rw-rw-r-- 1 boinc boinc       530 Jul 28 03:54 boinc_task_state.xml
[2025-07-28 03:55:22] -rw------- 1 boinc boinc 174758887 Jul 28 03:54 HITS.45759738._000029.pool.root.1
[2025-07-28 03:55:22] -rw------- 1 boinc boinc      1019 Jul 28 03:54 memory_monitor_summary.json
[2025-07-28 03:55:22] -rw------- 1 boinc boinc    363281 Jul 28 03:54 log.45759738._000029.job.log.tgz.1
[2025-07-28 03:55:22] -rw------- 1 boinc boinc      7730 Jul 28 03:54 heartbeat.json
[2025-07-28 03:55:22] -rw-rw-r-- 1 boinc boinc      8192 Jul 28 03:55 boinc_mmap_file
[2025-07-28 03:55:22] -rw-rw-r-- 1 boinc boinc        27 Jul 28 03:55 wrapper_checkpoint.txt
[2025-07-28 03:55:22] -rw------- 1 boinc boinc       822 Jul 28 03:55 pilotlog.txt
[2025-07-28 03:55:22] -rw------- 1 boinc boinc        95 Jul 28 03:55 pilot_heartbeat.json
[2025-07-28 03:55:22] -rw------- 1 boinc boinc    577885 Jul 28 03:55 log.45759738._000029.job.log.1
[2025-07-28 03:55:22] -rw------- 1 boinc boinc       357 Jul 28 03:55 output.list
[2025-07-28 03:55:22] -rw-rw-r-- 1 boinc boinc       620 Jul 28 03:55 runtime_log
[2025-07-28 03:55:22] -rw------- 1 boinc boinc    962560 Jul 28 03:55 result.tar.gz
[2025-07-28 03:55:22] -rw------- 1 boinc boinc       648 Jul 28 03:55 xysNDm155z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmotTLDmnyjqXo.diag
[2025-07-28 03:55:22] -rw-rw-r-- 1 boinc boinc      8954 Jul 28 03:55 runtime_log.err
[2025-07-28 03:55:22] -rw-rw-r-- 1 boinc boinc     21936 Jul 28 03:55 stderr.txt
[2025-07-28 03:55:22] HITS file was successfully produced:
[2025-07-28 03:55:22] -rw------- 1 boinc boinc 174758887 Jul 28 03:54 shared/HITS.pool.root.1
[2025-07-28 03:55:22]  *** Contents of shared directory: ***
[2025-07-28 03:55:22] total 408052
[2025-07-28 03:55:22] -rw-r--r-- 2 boinc boinc     15095 Jul 28 02:18 start_atlas.sh
[2025-07-28 03:55:22] -rw-r--r-- 2 boinc boinc    542882 Jul 28 02:18 input.tar.gz
[2025-07-28 03:55:22] -rw-r--r-- 2 boinc boinc 241550743 Jul 28 02:18 ATLAS.root_0
[2025-07-28 03:55:22] -rw------- 1 boinc boinc 174758887 Jul 28 03:54 HITS.pool.root.1
[2025-07-28 03:55:22] -rw------- 1 boinc boinc    962560 Jul 28 03:55 result.tar.gz
03:55:24 (2146983): run_atlas exited; CPU time 32223.492043
03:55:24 (2146983): called boinc_finish(0)

</stderr_txt>
]]>

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