Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:00:23 (139480): wrapper (7.7.26015): starting
15:00:23 (139480): wrapper: running run_atlas (--nthreads 6)
[2025-07-27 15:00:23] Arguments: --nthreads 6
[2025-07-27 15:00:23] Threads: 6
[2025-07-27 15:00:23] Checking for CVMFS
[2025-07-27 15:00:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 15:00:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 15:00:23] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 15:00:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 15:00:23] 2.13.1.0 3669327 1538 53216 148812 0 57 3026770 4097024 0 130560 0 1704686 99.994 48976 32455 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-07-27 15:00:23] CVMFS is ok
[2025-07-27 15:00:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 15:00:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 15:00:23] Further information can be found at the LHC@home message board.
[2025-07-27 15:00:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 15:00:23] Checking for apptainer binary...
[2025-07-27 15:00:23] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-07-27 15:00:23] apptainer is not installed, using version from CVMFS
[2025-07-27 15:00:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 15:00:23] pckeatlas08
[2025-07-27 15:00:23] apptainer works
[2025-07-27 15:00:23] Set ATHENA_PROC_NUMBER=6
[2025-07-27 15:00:23] Set ATHENA_CORE_NUMBER=6
[2025-07-27 15:00:23] Starting ATLAS job with PandaID=6745098023
[2025-07-27 15:00:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 16:03:54]  *** The last 200 lines of the pilot log: ***
[2025-07-27 16:03:54]  mtime=0
[2025-07-27 16:03:54]  protocol_id=None
[2025-07-27 16:03:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 16:03:54]  replicas=None
[2025-07-27 16:03:54]  scope=mc23_13p6TeV
[2025-07-27 16:03:54]  status=None
[2025-07-27 16:03:54]  status_code=0
[2025-07-27 16:03:54]  storage_token=
[2025-07-27 16:03:54]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6745098023/log.45743349._033225.job.log.tgz.1
[2025-07-27 16:03:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/37/74/log.45743349._033225.job.log.tgz.1
[2025-07-27 16:03:54]  workdir=None
[2025-07-27 16:03:54] ]
[2025-07-27 16:03:54] 2025-07-27 14:03:15,987 | INFO     | transferring file log.45743349._033225.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6745098023/log.45743349._033225.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-27 16:03:54] 2025-07-27 14:03:15,987 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6745098023/log.45743349._033225.job.log.tgz.1 /var/lib/boinc/slots/0/log.45743349._033225.job
[2025-07-27 16:03:54] 2025-07-27 14:03:15,996 | INFO     | adding to output.list: log.45743349._033225.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/37/74/log.45743349._033225.job.log.tg
[2025-07-27 16:03:54] 2025-07-27 14:03:15,996 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 16:03:54] 2025-07-27 14:03:15,997 | INFO     | summary of transferred files:
[2025-07-27 16:03:54] 2025-07-27 14:03:15,997 | INFO     |  -- lfn=log.45743349._033225.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 16:03:54] 2025-07-27 14:03:15,997 | INFO     | stage-out finished correctly
[2025-07-27 16:03:54] 2025-07-27 14:03:17,028 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 16:03:54] 2025-07-27 14:03:17,255 | INFO     | monitor loop #290: job 0:6745098023 is in state 'finished'
[2025-07-27 16:03:54] 2025-07-27 14:03:17,256 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:03:54] 2025-07-27 14:03:18,212 | INFO     | job 6745098023 has state=finished
[2025-07-27 16:03:54] 2025-07-27 14:03:18,212 | INFO     | preparing for final server update for job 6745098023 in state='finished'
[2025-07-27 16:03:54] 2025-07-27 14:03:18,213 | INFO     | this job has now completed (state=finished)
[2025-07-27 16:03:54] 2025-07-27 14:03:18,214 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 16:03:54] 2025-07-27 14:03:18,214 | INFO     | log transfer has been attempted: DONE
[2025-07-27 16:03:54] 2025-07-27 14:03:18,214 | INFO     | job 6745098023 has finished - writing final server update
[2025-07-27 16:03:54] 2025-07-27 14:03:18,215 | INFO     | total number of processed events: 400 (read)
[2025-07-27 16:03:54] 2025-07-27 14:03:18,215 | INFO     | executing command: lscpu
[2025-07-27 16:03:54] 2025-07-27 14:03:18,243 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 16:03:54] 2025-07-27 14:03:19,758 | INFO     | monitor loop #291: job 0:6745098023 is in state 'finished'
[2025-07-27 16:03:54] 2025-07-27 14:03:19,759 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:03:54] 2025-07-27 14:03:22,262 | INFO     | monitor loop #292: job 0:6745098023 is in state 'finished'
[2025-07-27 16:03:54] 2025-07-27 14:03:22,262 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 16:03:54] 2025-07-27 14:03:22,891 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 16:03:54] 2025-07-27 14:03:22,892 | INFO     | found 6 cores (6 cores per socket, 1 socket) , CPU MHz: 2941.2268333333336
[2025-07-27 16:03:54] 2025-07-27 14:03:22,892 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6745098023/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 16:03:54] 2025-07-27 14:03:22,893 | INFO     | extracted standard info from prmon json
[2025-07-27 16:03:54] 2025-07-27 14:03:22,893 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 16:03:54] 2025-07-27 14:03:22,893 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 16:03:54] 2025-07-27 14:03:22,893 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 16:03:54] 2025-07-27 14:03:22,893 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 16:03:54] 2025-07-27 14:03:22,893 | INFO     | fitting pss+swap vs Time
[2025-07-27 16:03:54] 2025-07-27 14:03:22,894 | INFO     | sum of square deviations: 51573060.0
[2025-07-27 16:03:54] 2025-07-27 14:03:22,894 | INFO     | sum of deviations: -4302835751.0
[2025-07-27 16:03:54] 2025-07-27 14:03:22,894 | INFO     | mean x: 1753623207.0
[2025-07-27 16:03:54] 2025-07-27 14:03:22,894 | INFO     | mean y: 2537485.018181818
[2025-07-27 16:03:54] 2025-07-27 14:03:22,894 | INFO     | -- intersect: 146310563979.13882
[2025-07-27 16:03:54] 2025-07-27 14:03:22,894 | INFO     | intersect: 146310563979.13882
[2025-07-27 16:03:54] 2025-07-27 14:03:22,894 | INFO     | chi2: 0.10130889315373023
[2025-07-27 16:03:54] 2025-07-27 14:03:22,894 | INFO     | -- intersect: 146310563979.13882
[2025-07-27 16:03:54] 2025-07-27 14:03:22,894 | INFO     | current memory leak: -83.43 B/s (using 55 data points, chi2=0.10)
[2025-07-27 16:03:54] 2025-07-27 14:03:22,894 | INFO     | could have reported an average CPU frequency of 3307 MHz (6 samples)
[2025-07-27 16:03:54] 2025-07-27 14:03:22,894 | INFO     | ..............................
[2025-07-27 16:03:54] 2025-07-27 14:03:22,894 | INFO     | . Timing measurements:
[2025-07-27 16:03:54] 2025-07-27 14:03:22,894 | INFO     | . get job = 0 s
[2025-07-27 16:03:54] 2025-07-27 14:03:22,894 | INFO     | . initial setup = 0 s
[2025-07-27 16:03:54] 2025-07-27 14:03:22,894 | INFO     | . payload setup = 7 s
[2025-07-27 16:03:54] 2025-07-27 14:03:22,894 | INFO     | . stage-in = 0 s
[2025-07-27 16:03:54] 2025-07-27 14:03:22,894 | INFO     | . payload execution = 3739 s
[2025-07-27 16:03:54] 2025-07-27 14:03:22,894 | INFO     | . stage-out = 0 s
[2025-07-27 16:03:54] 2025-07-27 14:03:22,895 | INFO     | . log creation = 0 s
[2025-07-27 16:03:54] 2025-07-27 14:03:22,895 | INFO     | ..............................
[2025-07-27 16:03:54] 2025-07-27 14:03:23,037 | INFO     | 
[2025-07-27 16:03:54] 2025-07-27 14:03:23,037 | INFO     | job summary report
[2025-07-27 16:03:54] 2025-07-27 14:03:23,037 | INFO     | --------------------------------------------------
[2025-07-27 16:03:54] 2025-07-27 14:03:23,037 | INFO     | PanDA job id: 6745098023
[2025-07-27 16:03:54] 2025-07-27 14:03:23,037 | INFO     | task id: 45743349
[2025-07-27 16:03:54] 2025-07-27 14:03:23,037 | INFO     | errors: (none)
[2025-07-27 16:03:54] 2025-07-27 14:03:23,037 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 16:03:54] 2025-07-27 14:03:23,037 | INFO     | pilot state: finished 
[2025-07-27 16:03:54] 2025-07-27 14:03:23,037 | INFO     | transexitcode: 0
[2025-07-27 16:03:54] 2025-07-27 14:03:23,037 | INFO     | exeerrorcode: 0
[2025-07-27 16:03:54] 2025-07-27 14:03:23,037 | INFO     | exeerrordiag: 
[2025-07-27 16:03:54] 2025-07-27 14:03:23,037 | INFO     | exitcode: 0
[2025-07-27 16:03:54] 2025-07-27 14:03:23,037 | INFO     | exitmsg: OK
[2025-07-27 16:03:54] 2025-07-27 14:03:23,037 | INFO     | cpuconsumptiontime: 21427 s
[2025-07-27 16:03:54] 2025-07-27 14:03:23,037 | INFO     | nevents: 400
[2025-07-27 16:03:54] 2025-07-27 14:03:23,038 | INFO     | neventsw: 0
[2025-07-27 16:03:54] 2025-07-27 14:03:23,038 | INFO     | pid: 150141
[2025-07-27 16:03:54] 2025-07-27 14:03:23,038 | INFO     | pgrp: 150141
[2025-07-27 16:03:54] 2025-07-27 14:03:23,038 | INFO     | corecount: 6
[2025-07-27 16:03:54] 2025-07-27 14:03:23,038 | INFO     | event service: False
[2025-07-27 16:03:54] 2025-07-27 14:03:23,038 | INFO     | sizes: {0: 2397475, 5: 2397737, 11: 2397793, 3749: 2423643, 3750: 2432641, 3751: 2432697, 3757: 2433019}
[2025-07-27 16:03:54] 2025-07-27 14:03:23,038 | INFO     | --------------------------------------------------
[2025-07-27 16:03:54] 2025-07-27 14:03:23,038 | INFO     | 
[2025-07-27 16:03:54] 2025-07-27 14:03:23,038 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-27 16:03:54] 2025-07-27 14:03:23,045 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 16:03:54] 2025-07-27 14:03:23,046 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 16:03:54] 2025-07-27 14:03:23,046 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 16:03:54] 2025-07-27 14:03:23,046 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 16:03:54] 2025-07-27 14:03:23,046 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 16:03:54] 2025-07-27 14:03:23,046 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 16:03:54] 2025-07-27 14:03:23,046 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 16:03:54] 2025-07-27 14:03:23,046 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 16:03:54] 2025-07-27 14:03:23,046 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 16:03:54] 2025-07-27 14:03:23,046 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 16:03:54] 2025-07-27 14:03:23,046 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 16:03:54] 2025-07-27 14:03:23,046 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 16:03:54] 2025-07-27 14:03:23,046 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 16:03:54] 2025-07-27 14:03:23,046 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 16:03:54] 2025-07-27 14:03:23,046 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 16:03:54] 2025-07-27 14:03:23,046 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 16:03:54] 2025-07-27 14:03:23,046 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 16:03:54] 2025-07-27 14:03:23,046 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 16:03:54] 2025-07-27 14:03:23,046 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 16:03:54] 2025-07-27 14:03:23,046 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 16:03:54] 2025-07-27 14:03:23,046 | INFO     | job 6745098023 has completed (purged errors)
[2025-07-27 16:03:54] 2025-07-27 14:03:23,046 | INFO     | overall cleanup function is called
[2025-07-27 16:03:54] 2025-07-27 14:03:24,052 | INFO     | --- collectZombieJob: --- 10, [150141]
[2025-07-27 16:03:54] 2025-07-27 14:03:24,052 | INFO     | zombie collector waiting for pid 150141
[2025-07-27 16:03:54] 2025-07-27 14:03:24,052 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 16:03:54] 2025-07-27 14:03:24,052 | INFO     | collected zombie processes
[2025-07-27 16:03:54] 2025-07-27 14:03:24,052 | INFO     | will attempt to kill all subprocesses of pid=150141
[2025-07-27 16:03:54] 2025-07-27 14:03:24,088 | INFO     | process IDs to be killed: [150141] (in reverse order)
[2025-07-27 16:03:54] 2025-07-27 14:03:24,107 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 16:03:54] 2025-07-27 14:03:24,108 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 16:03:54] 2025-07-27 14:03:24,109 | INFO     | did not find any defunct processes belonging to 150141
[2025-07-27 16:03:54] 2025-07-27 14:03:24,110 | INFO     | did not find any defunct processes belonging to 150141
[2025-07-27 16:03:54] 2025-07-27 14:03:24,110 | INFO     | ready for new job
[2025-07-27 16:03:54] 2025-07-27 14:03:24,110 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 16:03:54] 2025-07-27 14:03:24,111 | INFO     | ***************************************
[2025-07-27 16:03:54] 2025-07-27 14:03:24,111 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 16:03:54] 2025-07-27 14:03:24,111 | INFO     | ***************************************
[2025-07-27 16:03:54] 2025-07-27 14:03:24,111 | INFO     | 
[2025-07-27 16:03:54] 2025-07-27 14:03:24,122 | INFO     | architecture information:
[2025-07-27 16:03:54] 2025-07-27 14:03:24,122 | INFO     | executing command: cat /etc/os-release
[2025-07-27 16:03:54] 2025-07-27 14:03:24,128 | INFO     | cat /etc/os-release:
[2025-07-27 16:03:54] NAME="CentOS Linux"
[2025-07-27 16:03:54] VERSION="7 (Core)"
[2025-07-27 16:03:54] ID="centos"
[2025-07-27 16:03:54] ID_LIKE="rhel fedora"
[2025-07-27 16:03:54] VERSION_ID="7"
[2025-07-27 16:03:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 16:03:54] ANSI_COLOR="0;31"
[2025-07-27 16:03:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 16:03:54] HOME_URL="https://www.centos.org/"
[2025-07-27 16:03:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 16:03:54] 
[2025-07-27 16:03:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 16:03:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 16:03:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 16:03:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 16:03:54] 
[2025-07-27 16:03:54] 2025-07-27 14:03:24,128 | INFO     | ***************************************
[2025-07-27 16:03:54] 2025-07-27 14:03:24,632 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-27 16:03:54] 2025-07-27 14:03:24,642 | INFO     | sufficient remaining disk space (112415735808 B)
[2025-07-27 16:03:54] 2025-07-27 14:03:24,642 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 16:03:54] 2025-07-27 14:03:24,642 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 16:03:54] 2025-07-27 14:03:24,642 | INFO     | update_server=False
[2025-07-27 16:03:54] 2025-07-27 14:03:24,642 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 16:03:54] 2025-07-27 14:03:24,642 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:03:54] 2025-07-27 14:03:24,643 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 16:03:54] 2025-07-27 14:03:24,718 | INFO     | all job control threads have been joined
[2025-07-27 16:03:54] 2025-07-27 14:03:24,766 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 16:03:54] 2025-07-27 14:03:24,767 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 16:03:54] 2025-07-27 14:03:24,767 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 16:03:54] 2025-07-27 14:03:24,767 | INFO     | will abort loop
[2025-07-27 16:03:54] 2025-07-27 14:03:25,529 | INFO     | all data control threads have been joined
[2025-07-27 16:03:54] 2025-07-27 14:03:25,648 | INFO     | [job] retrieve thread has finished
[2025-07-27 16:03:54] 2025-07-27 14:03:25,649 | INFO     | [job] queue monitor thread has finished
[2025-07-27 16:03:54] 2025-07-27 14:03:25,668 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 16:03:54] 2025-07-27 14:03:25,673 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 16:03:54] 2025-07-27 14:03:25,724 | INFO     | [job] control thread has finished
[2025-07-27 16:03:54] 2025-07-27 14:03:25,730 | INFO     | all payload control threads have been joined
[2025-07-27 16:03:54] 2025-07-27 14:03:25,773 | INFO     | [job] job monitor thread has finished
[2025-07-27 16:03:54] 2025-07-27 14:03:26,075 | INFO     | [data] copytool_in thread has finished
[2025-07-27 16:03:54] 2025-07-27 14:03:26,303 | INFO     | [payload] validate_post thread has finished
[2025-07-27 16:03:54] 2025-07-27 14:03:26,535 | INFO     | [data] control thread has finished
[2025-07-27 16:03:54] 2025-07-27 14:03:26,647 | INFO     | [data] copytool_out thread has finished
[2025-07-27 16:03:54] 2025-07-27 14:03:26,736 | INFO     | [payload] control thread has finished
[2025-07-27 16:03:54] 2025-07-27 14:03:26,839 | INFO     | [payload] failed_post thread has finished
[2025-07-27 16:03:54] 2025-07-27 14:03:27,000 | INFO     | [job] validate thread has finished
[2025-07-27 16:03:54] 2025-07-27 14:03:27,125 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 16:03:54] 2025-07-27 14:03:27,571 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 16:03:54] 2025-07-27 14:03:31,579 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 16:03:54] 2025-07-27 14:03:35,164 | INFO     | job.realtimelogging is not enabled
[2025-07-27 16:03:54] 2025-07-27 14:03:36,170 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 16:03:54] 2025-07-27 14:03:36,887 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140077847537472)>', '<ExcThread(monitor, started 140076935804672)>']
[2025-07-27 16:03:54] 2025-07-27 14:03:41,913 | INFO     | all workflow threads have been joined
[2025-07-27 16:03:54] 2025-07-27 14:03:41,914 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 16:03:54] 2025-07-27 14:03:41,914 | INFO     | traces error code: 0
[2025-07-27 16:03:54] 2025-07-27 14:03:41,915 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 16:03:54] 2025-07-27 14:03:54,866 | INFO     | PID=143101 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 16:03:54] 2025-07-27 14:03:54,866 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 16:03:54] 2025-07-27 14:03:54,866 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 16:03:54] 2025-07-27 14:03:54,866 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 16:03:54] 2025-07-27 14:03:54,866 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 16:03:54] 2025-07-27 14:03:54,866 | INFO     | [monitor] control thread has ended
[2025-07-27 16:03:54] 2025-07-27 14:03:54,921 [wrapper] ==== pilot stdout END ====
[2025-07-27 16:03:54] 2025-07-27 14:03:54,922 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 16:03:54] 2025-07-27 14:03:54,924 [wrapper] pilotpid: 143101
[2025-07-27 16:03:54] 2025-07-27 14:03:54,925 [wrapper] Pilot exit status: 0
[2025-07-27 16:03:54] 2025-07-27 14:03:54,929 [wrapper] pandaids: 6745098023
[2025-07-27 16:03:54] 2025-07-27 14:03:54,940 [wrapper] cleanup supervisor_pilot  162555 143102
[2025-07-27 16:03:54] 2025-07-27 14:03:54,942 [wrapper] Test setup, not cleaning
[2025-07-27 16:03:54] 2025-07-27 14:03:54,943 [wrapper] apfmon messages muted
[2025-07-27 16:03:54] 2025-07-27 14:03:54,944 [wrapper] ==== wrapper stdout END ====
[2025-07-27 16:03:54] 2025-07-27 14:03:54,945 [wrapper] ==== wrapper stderr END ====
[2025-07-27 16:03:54]  *** Error codes and diagnostics ***
[2025-07-27 16:03:54]     "exeErrorCode": 0,
[2025-07-27 16:03:54]     "exeErrorDiag": "",
[2025-07-27 16:03:54]     "pilotErrorCode": 0,
[2025-07-27 16:03:54]     "pilotErrorDiag": "",
[2025-07-27 16:03:54]  *** Listing of results directory ***
[2025-07-27 16:03:54] total 350820
[2025-07-27 16:03:54] -rw-r--r-- 1 boinc boinc    530466 Jul 26 07:25 pilot3.tar.gz
[2025-07-27 16:03:54] -rwx------ 1 boinc boinc     36292 Jul 26 08:04 runpilot2-wrapper.sh
[2025-07-27 16:03:54] -rw-r--r-- 1 boinc boinc      5112 Jul 26 08:04 queuedata.json
[2025-07-27 16:03:54] -rw-r--r-- 1 boinc boinc       100 Jul 27 15:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 16:03:54] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 15:00 run_atlas
[2025-07-27 16:03:54] -rw-r--r-- 1 boinc boinc       105 Jul 27 15:00 job.xml
[2025-07-27 16:03:54] -rw-r--r-- 1 boinc boinc      6517 Jul 27 15:00 init_data.xml
[2025-07-27 16:03:54] -rw-r--r-- 2 boinc boinc 145144699 Jul 27 15:00 EVNT.45743347._001877.pool.root.1
[2025-07-27 16:03:54] -rw-r--r-- 2 boinc boinc     15095 Jul 27 15:00 start_atlas.sh
[2025-07-27 16:03:54] drwxrwx--x 2 boinc boinc        68 Jul 27 15:00 shared
[2025-07-27 16:03:54] -rw-r--r-- 2 boinc boinc    542894 Jul 27 15:00 input.tar.gz
[2025-07-27 16:03:54] -rw-r--r-- 1 boinc boinc         0 Jul 27 15:00 boinc_lockfile
[2025-07-27 16:03:54] -rw-r--r-- 1 boinc boinc      2563 Jul 27 15:00 pandaJob.out
[2025-07-27 16:03:54] -rw------- 1 boinc boinc    980117 Jul 27 15:00 agis_schedconf.cvmfs.json
[2025-07-27 16:03:54] -rw------- 1 boinc boinc   1593052 Jul 27 15:00 agis_ddmendpoints.agis.ALL.json
[2025-07-27 16:03:54] drwx------ 4 boinc boinc      4096 Jul 27 15:00 pilot3
[2025-07-27 16:03:54] -rw------- 1 boinc boinc 208962060 Jul 27 16:02 HITS.45743349._033225.pool.root.1
[2025-07-27 16:03:54] -rw------- 1 boinc boinc      1027 Jul 27 16:03 memory_monitor_summary.json
[2025-07-27 16:03:54] -rw-r--r-- 1 boinc boinc       529 Jul 27 16:03 boinc_task_state.xml
[2025-07-27 16:03:54] -rw------- 1 boinc boinc    254276 Jul 27 16:03 log.45743349._033225.job.log.tgz.1
[2025-07-27 16:03:54] -rw------- 1 boinc boinc      7764 Jul 27 16:03 heartbeat.json
[2025-07-27 16:03:54] -rw-r--r-- 1 boinc boinc      8192 Jul 27 16:03 boinc_mmap_file
[2025-07-27 16:03:54] -rw-r--r-- 1 boinc boinc        27 Jul 27 16:03 wrapper_checkpoint.txt
[2025-07-27 16:03:54] -rw------- 1 boinc boinc       746 Jul 27 16:03 pilotlog.txt
[2025-07-27 16:03:54] -rw------- 1 boinc boinc        95 Jul 27 16:03 pilot_heartbeat.json
[2025-07-27 16:03:54] -rw------- 1 boinc boinc    380147 Jul 27 16:03 log.45743349._033225.job.log.1
[2025-07-27 16:03:54] -rw------- 1 boinc boinc       357 Jul 27 16:03 output.list
[2025-07-27 16:03:54] -rw-r--r-- 1 boinc boinc       620 Jul 27 16:03 runtime_log
[2025-07-27 16:03:54] -rw------- 1 boinc boinc    655360 Jul 27 16:03 result.tar.gz
[2025-07-27 16:03:54] -rw-r--r-- 1 boinc boinc      8673 Jul 27 16:03 runtime_log.err
[2025-07-27 16:03:54] -rw------- 1 boinc boinc       649 Jul 27 16:03 runMDm6Bnz7n9Rq4apOajLDm4fhM0noT9bVof3QYDm5E0KDmzk0zHo.diag
[2025-07-27 16:03:54] -rw-r--r-- 1 boinc boinc     21796 Jul 27 16:03 stderr.txt
[2025-07-27 16:03:55] HITS file was successfully produced:
[2025-07-27 16:03:55] -rw------- 1 boinc boinc 208962060 Jul 27 16:02 shared/HITS.pool.root.1
[2025-07-27 16:03:55]  *** Contents of shared directory: ***
[2025-07-27 16:03:55] total 347000
[2025-07-27 16:03:55] -rw-r--r-- 2 boinc boinc 145144699 Jul 27 15:00 ATLAS.root_0
[2025-07-27 16:03:55] -rw-r--r-- 2 boinc boinc     15095 Jul 27 15:00 start_atlas.sh
[2025-07-27 16:03:55] -rw-r--r-- 2 boinc boinc    542894 Jul 27 15:00 input.tar.gz
[2025-07-27 16:03:55] -rw------- 1 boinc boinc 208962060 Jul 27 16:02 HITS.pool.root.1
[2025-07-27 16:03:55] -rw------- 1 boinc boinc    655360 Jul 27 16:03 result.tar.gz
16:03:56 (139480): run_atlas exited; CPU time 21442.089106
16:03:56 (139480): called boinc_finish(0)

</stderr_txt>
]]>

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