Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:12:48 (179279): wrapper (7.7.26015): starting
00:12:48 (179279): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 00:12:48] Arguments: --nthreads 12
[2025-07-27 00:12:48] Threads: 12
[2025-07-27 00:12:48] Checking for CVMFS
[2025-07-27 00:12:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 00:12:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 00:12:48] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 00:12:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 00:12:49] 2.11.5.0 11320 25047 221092 148803 3 324 33011299 45568001 12839 130560 0 215866951 99.782 132949408 22000 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-07-27 00:12:49] CVMFS is ok
[2025-07-27 00:12:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 00:12:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 00:12:49] Further information can be found at the LHC@home message board.
[2025-07-27 00:12:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 00:12:49] Checking for apptainer binary...
[2025-07-27 00:12:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 00:12:49] Running /usr/bin/apptainer --version
[2025-07-27 00:12:49] apptainer version 1.4.1-1.el9
[2025-07-27 00:12:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 00:12:49] wns0066.triumf.lcg
[2025-07-27 00:12:49] apptainer works
[2025-07-27 00:12:49] Set ATHENA_PROC_NUMBER=12
[2025-07-27 00:12:49] Set ATHENA_CORE_NUMBER=12
[2025-07-27 00:12:49] Starting ATLAS job with PandaID=6746024461
[2025-07-27 00:12:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 00:16:07]  *** The last 200 lines of the pilot log: ***
[2025-07-27 00:16:07] 2025-07-27 07:15:34,686 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | WARNING  | found no stored workdir sizes
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | WARNING  | wrong length of table data, x=[1753600398.0], y=[847.0] (must be same and length>=4)
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | INFO     | could have reported an average CPU frequency of 2545 MHz (4 samples)
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | INFO     | ..............................
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | INFO     | . Timing measurements:
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | INFO     | . get job = 0 s
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | INFO     | . initial setup = 2 s
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | INFO     | . payload setup = 3 s
[2025-07-27 00:16:07] 2025-07-27 07:15:34,688 | INFO     | . stage-in = 0 s
[2025-07-27 00:16:07] 2025-07-27 07:15:34,688 | INFO     | . payload execution = 14 s
[2025-07-27 00:16:07] 2025-07-27 07:15:34,688 | INFO     | . stage-out = 0 s
[2025-07-27 00:16:07] 2025-07-27 07:15:34,688 | INFO     | . log creation = 0 s
[2025-07-27 00:16:07] 2025-07-27 07:15:34,688 | INFO     | ..............................
[2025-07-27 00:16:07] 2025-07-27 07:15:34,688 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 00:16:07] 2025-07-27 07:15:34,688 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6746024461/pilotlog.txt
[2025-07-27 00:16:07] 2025-07-27 07:15:34,698 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-27 00:16:07] - Log from pilotlog.txt -
[2025-07-27 00:16:07] 2025-07-27 07:15:34,686 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 00:16:07] 2025-07-27 07:15:34,686 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 00:16:07] 2025-07-27 07:15:34,686 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 00:16:07] 2025-07-27 07:15:34,686 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | WARNING  | found no stored workdir sizes
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | WARNING  | wrong length of table data, x=[1753600398.0], y=[847.0] (must be same and length>=4)
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | INFO     | could have reported an average CPU frequency of 2545 MHz (4 samples)
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | INFO     | ..............................
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | INFO     | . Timing measurements:
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | INFO     | . get job = 0 s
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | INFO     | . initial setup = 2 s
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | INFO     | . payload setup = 3 s
[2025-07-27 00:16:07] 2025-07-27 07:15:34,688 | INFO     | . stage-in = 0 s
[2025-07-27 00:16:07] 2025-07-27 07:15:34,688 | INFO     | . payload execution = 14 s
[2025-07-27 00:16:07] 2025-07-27 07:15:34,688 | INFO     | . stage-out = 0 s
[2025-07-27 00:16:07] 2025-07-27 07:15:34,688 | INFO     | . log creation = 0 s
[2025-07-27 00:16:07] 2025-07-27 07:15:34,688 | INFO     | ..............................
[2025-07-27 00:16:07] 2025-07-27 07:15:34,688 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 00:16:07] 2025-07-27 07:15:34,688 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6746024461/pilotlog.txt
[2025-07-27 00:16:07] 2025-07-27 07:15:34,698 | WARNING  | 
[2025-07-27 00:16:07] [begin log extracts]
[2025-07-27 00:16:07] - Log from pilotlog.txt -
[2025-07-27 00:16:07] 2025-07-27 07:15:34,686 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 00:16:07] 2025-07-27 07:15:34,686 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 00:16:07] 2025-07-27 07:15:34,686 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 00:16:07] 2025-07-27 07:15:34,686 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | WARNING  | found no stored workdir sizes
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | INFO     | will not add max space = 0 B to job metrics
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | WARNING  | wrong length of table data, x=[1753600398.0], y=[847.0] (must be same and length>=4)
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | INFO     | could have reported an average CPU frequency of 2545 MHz (4 samples)
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | INFO     | ..............................
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | INFO     | . Timing measurements:
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | INFO     | . get job = 0 s
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | INFO     | . initial setup = 2 s
[2025-07-27 00:16:07] 2025-07-27 07:15:34,687 | INFO     | . payload setup = 3 s
[2025-07-27 00:16:07] 2025-07-27 07:15:34,688 | INFO     | . stage-in = 0 s
[2025-07-27 00:16:07] 2025-07-27 07:15:34,688 | INFO     | . payload execution = 14 s
[2025-07-27 00:16:07] 2025-07-27 07:15:34,688 | INFO     | . stage-out = 0 s
[2025-07-27 00:16:07] 2025-07-27 07:15:34,688 | INFO     | . log creation = 0 s
[2025-07-27 00:16:07] 2025-07-27 07:15:34,688 | INFO     | ..............................
[2025-07-27 00:16:07] 2025-07-27 07:15:34,688 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-27 00:16:07] 2025-07-27 07:15:34,688 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6746024461/pilotlog.txt
[2025-07-27 00:16:07] [end log extracts]
[2025-07-27 00:16:07] 2025-07-27 07:15:34,698 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-27 00:16:07] 2025-07-27 07:15:34,699 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-27 00:16:07] 2025-07-27 07:15:34,852 | INFO     | 
[2025-07-27 00:16:07] 2025-07-27 07:15:34,852 | INFO     | job summary report
[2025-07-27 00:16:07] 2025-07-27 07:15:34,852 | INFO     | --------------------------------------------------
[2025-07-27 00:16:07] 2025-07-27 07:15:34,853 | INFO     | PanDA job id: 6746024461
[2025-07-27 00:16:07] 2025-07-27 07:15:34,853 | INFO     | task id: 45758492
[2025-07-27 00:16:07] 2025-07-27 07:15:34,853 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-27 00:13:24,210 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-27 00:16:07] 2025-07-27 07:15:34,853 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 00:16:07] 2025-07-27 07:15:34,853 | INFO     | pilot state: failed 
[2025-07-27 00:16:07] 2025-07-27 07:15:34,853 | INFO     | transexitcode: 65
[2025-07-27 00:16:07] 2025-07-27 07:15:34,853 | INFO     | exeerrorcode: 65
[2025-07-27 00:16:07] 2025-07-27 07:15:34,853 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 00:16:07] 2025-07-27 07:15:34,853 | INFO     | exitcode: 65
[2025-07-27 00:16:07] 2025-07-27 07:15:34,853 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-27 00:16:07] 2025-07-27 07:15:34,853 | INFO     | cpuconsumptiontime: 18 s
[2025-07-27 00:16:07] 2025-07-27 07:15:34,853 | INFO     | nevents: 0
[2025-07-27 00:16:07] 2025-07-27 07:15:34,853 | INFO     | neventsw: 0
[2025-07-27 00:16:07] 2025-07-27 07:15:34,853 | INFO     | pid: 189207
[2025-07-27 00:16:07] 2025-07-27 07:15:34,853 | INFO     | pgrp: 189207
[2025-07-27 00:16:07] 2025-07-27 07:15:34,853 | INFO     | corecount: 12
[2025-07-27 00:16:07] 2025-07-27 07:15:34,853 | INFO     | event service: False
[2025-07-27 00:16:07] 2025-07-27 07:15:34,853 | INFO     | sizes: {0: 2397406, 3: 2397668, 11: 2397696, 21: 2420976, 22: 2425268, 24: 2425296, 144: 2425590}
[2025-07-27 00:16:07] 2025-07-27 07:15:34,853 | INFO     | --------------------------------------------------
[2025-07-27 00:16:07] 2025-07-27 07:15:34,853 | INFO     | 
[2025-07-27 00:16:07] 2025-07-27 07:15:34,854 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-27 00:16:07] 2025-07-27 07:15:34,867 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 00:16:07] 2025-07-27 07:15:34,867 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 00:16:07] 2025-07-27 07:15:34,867 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 00:16:07] 2025-07-27 07:15:34,867 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 00:16:07] 2025-07-27 07:15:34,867 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 00:16:07] 2025-07-27 07:15:34,867 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 00:16:07] 2025-07-27 07:15:34,867 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 00:16:07] 2025-07-27 07:15:34,867 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 00:16:07] 2025-07-27 07:15:34,867 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 00:16:07] 2025-07-27 07:15:34,867 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 00:16:07] 2025-07-27 07:15:34,867 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 00:16:07] 2025-07-27 07:15:34,867 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 00:16:07] 2025-07-27 07:15:34,868 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 00:16:07] 2025-07-27 07:15:34,868 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 00:16:07] 2025-07-27 07:15:34,868 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 00:16:07] 2025-07-27 07:15:34,868 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 00:16:07] 2025-07-27 07:15:34,868 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 00:16:07] 2025-07-27 07:15:34,868 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 00:16:07] 2025-07-27 07:15:34,868 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 00:16:07] 2025-07-27 07:15:34,868 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 00:16:07] 2025-07-27 07:15:34,868 | INFO     | job 6746024461 has completed (purged errors)
[2025-07-27 00:16:07] 2025-07-27 07:15:34,868 | INFO     | overall cleanup function is called
[2025-07-27 00:16:07] 2025-07-27 07:15:35,874 | INFO     | --- collectZombieJob: --- 10, [189207]
[2025-07-27 00:16:07] 2025-07-27 07:15:35,874 | INFO     | zombie collector waiting for pid 189207
[2025-07-27 00:16:07] 2025-07-27 07:15:35,874 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 00:16:07] 2025-07-27 07:15:35,874 | INFO     | collected zombie processes
[2025-07-27 00:16:07] 2025-07-27 07:15:35,874 | INFO     | will attempt to kill all subprocesses of pid=189207
[2025-07-27 00:16:07] 2025-07-27 07:15:36,026 | INFO     | process IDs to be killed: [189207] (in reverse order)
[2025-07-27 00:16:07] 2025-07-27 07:15:36,085 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 00:16:07] 2025-07-27 07:15:36,085 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 00:16:07] 2025-07-27 07:15:36,091 | INFO     | did not find any defunct processes belonging to 189207
[2025-07-27 00:16:07] 2025-07-27 07:15:36,097 | INFO     | did not find any defunct processes belonging to 189207
[2025-07-27 00:16:07] 2025-07-27 07:15:36,097 | INFO     | ready for new job
[2025-07-27 00:16:07] 2025-07-27 07:15:36,097 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 00:16:07] 2025-07-27 07:15:36,099 | INFO     | ***************************************
[2025-07-27 00:16:07] 2025-07-27 07:15:36,099 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 00:16:07] 2025-07-27 07:15:36,099 | INFO     | ***************************************
[2025-07-27 00:16:07] 2025-07-27 07:15:36,099 | INFO     | 
[2025-07-27 00:16:07] 2025-07-27 07:15:36,101 | INFO     | architecture information:
[2025-07-27 00:16:07] 2025-07-27 07:15:36,101 | INFO     | executing command: cat /etc/os-release
[2025-07-27 00:16:07] 2025-07-27 07:15:36,111 | INFO     | cat /etc/os-release:
[2025-07-27 00:16:07] NAME="CentOS Linux"
[2025-07-27 00:16:07] VERSION="7 (Core)"
[2025-07-27 00:16:07] ID="centos"
[2025-07-27 00:16:07] ID_LIKE="rhel fedora"
[2025-07-27 00:16:07] VERSION_ID="7"
[2025-07-27 00:16:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 00:16:07] ANSI_COLOR="0;31"
[2025-07-27 00:16:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 00:16:07] HOME_URL="https://www.centos.org/"
[2025-07-27 00:16:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 00:16:07] 
[2025-07-27 00:16:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 00:16:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 00:16:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 00:16:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 00:16:07] 
[2025-07-27 00:16:07] 2025-07-27 07:15:36,111 | INFO     | ***************************************
[2025-07-27 00:16:07] 2025-07-27 07:15:36,613 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-27 00:16:07] 2025-07-27 07:15:36,625 | INFO     | sufficient remaining disk space (2117742886912 B)
[2025-07-27 00:16:07] 2025-07-27 07:15:36,625 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 00:16:07] 2025-07-27 07:15:36,625 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 00:16:07] 2025-07-27 07:15:36,625 | INFO     | update_server=False
[2025-07-27 00:16:07] 2025-07-27 07:15:36,625 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 00:16:07] 2025-07-27 07:15:36,625 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 00:16:07] 2025-07-27 07:15:36,625 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 00:16:07] 2025-07-27 07:15:36,879 | INFO     | all job control threads have been joined
[2025-07-27 00:16:07] 2025-07-27 07:15:37,398 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 00:16:07] 2025-07-27 07:15:37,398 | INFO     | aborting loop
[2025-07-27 00:16:07] 2025-07-27 07:15:37,573 | INFO     | all payload control threads have been joined
[2025-07-27 00:16:07] 2025-07-27 07:15:37,630 | INFO     | [job] retrieve thread has finished
[2025-07-27 00:16:07] 2025-07-27 07:15:37,631 | INFO     | [job] queue monitor thread has finished
[2025-07-27 00:16:07] 2025-07-27 07:15:37,654 | INFO     | all data control threads have been joined
[2025-07-27 00:16:07] 2025-07-27 07:15:37,667 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 00:16:07] 2025-07-27 07:15:37,768 | INFO     | [payload] validate_post thread has finished
[2025-07-27 00:16:07] 2025-07-27 07:15:37,884 | INFO     | [job] control thread has finished
[2025-07-27 00:16:07] 2025-07-27 07:15:38,128 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 00:16:07] 2025-07-27 07:15:38,264 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 00:16:07] 2025-07-27 07:15:38,302 | INFO     | [payload] failed_post thread has finished
[2025-07-27 00:16:07] 2025-07-27 07:15:38,403 | INFO     | [job] job monitor thread has finished
[2025-07-27 00:16:07] 2025-07-27 07:15:38,578 | INFO     | [payload] control thread has finished
[2025-07-27 00:16:07] 2025-07-27 07:15:38,631 | INFO     | [data] copytool_out thread has finished
[2025-07-27 00:16:07] 2025-07-27 07:15:38,659 | INFO     | [data] control thread has finished
[2025-07-27 00:16:07] 2025-07-27 07:15:38,881 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 00:16:07] 2025-07-27 07:15:38,919 | INFO     | [job] validate thread has finished
[2025-07-27 00:16:07] 2025-07-27 07:15:38,981 | INFO     | [data] copytool_in thread has finished
[2025-07-27 00:16:07] 2025-07-27 07:15:39,055 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 00:16:07] 2025-07-27 07:15:42,133 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 00:16:07] 2025-07-27 07:15:43,487 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139963758311232)>', '<ExcThread(monitor, started 139962766841600)>']
[2025-07-27 00:16:07] 2025-07-27 07:15:48,512 | INFO     | all workflow threads have been joined
[2025-07-27 00:16:07] 2025-07-27 07:15:48,512 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 00:16:07] 2025-07-27 07:15:48,513 | INFO     | traces error code: 0
[2025-07-27 00:16:07] 2025-07-27 07:15:48,513 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 00:16:07] 2025-07-27 07:16:07,439 | INFO     | PID=182868 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 00:16:07] 2025-07-27 07:16:07,439 | INFO     | .. there are 21 such processes running
[2025-07-27 00:16:07] 2025-07-27 07:16:07,440 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 00:16:07] 2025-07-27 07:16:07,440 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 00:16:07] 2025-07-27 07:16:07,440 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 00:16:07] 2025-07-27 07:16:07,440 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 00:16:07] 2025-07-27 07:16:07,440 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 00:16:07] 2025-07-27 07:16:07,440 | INFO     | [monitor] control thread has ended
[2025-07-27 00:16:07] 2025-07-27 07:16:07,553 [wrapper] ==== pilot stdout END ====
[2025-07-27 00:16:07] 2025-07-27 07:16:07,555 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 00:16:07] 2025-07-27 07:16:07,557 [wrapper] pilotpid: 182868
[2025-07-27 00:16:07] 2025-07-27 07:16:07,558 [wrapper] Pilot exit status: 0
[2025-07-27 00:16:07] 2025-07-27 07:16:07,565 [wrapper] pandaids: 6746024461
[2025-07-27 00:16:07] 2025-07-27 07:16:07,602 [wrapper] cleanup supervisor_pilot  182874 182869
[2025-07-27 00:16:07] 2025-07-27 07:16:07,604 [wrapper] Test setup, not cleaning
[2025-07-27 00:16:07] 2025-07-27 07:16:07,606 [wrapper] apfmon messages muted
[2025-07-27 00:16:07] 2025-07-27 07:16:07,608 [wrapper] ==== wrapper stdout END ====
[2025-07-27 00:16:07] 2025-07-27 07:16:07,610 [wrapper] ==== wrapper stderr END ====
[2025-07-27 00:16:07]  *** Error codes and diagnostics ***
[2025-07-27 00:16:07]     "exeErrorCode": 65,
[2025-07-27 00:16:07]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 00:16:07]     "pilotErrorCode": 1305,
[2025-07-27 00:16:07]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-27 00:16:07]  *** Listing of results directory ***
[2025-07-27 00:16:07] total 207348
[2025-07-27 00:16:07] -rw-r--r--. 1 boinc boinc      5112 Jul 26 21:45 queuedata.json
[2025-07-27 00:16:07] -rwx------. 1 boinc boinc     36292 Jul 26 21:45 runpilot2-wrapper.sh
[2025-07-27 00:16:07] -rw-r--r--. 1 boinc boinc    530466 Jul 26 21:45 pilot3.tar.gz
[2025-07-27 00:16:07] -rw-r--r--. 1 boinc boinc       100 Jul 27 00:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 00:16:07] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 00:12 run_atlas
[2025-07-27 00:16:07] -rw-r--r--. 1 boinc boinc       105 Jul 27 00:12 job.xml
[2025-07-27 00:16:07] -rw-r--r--. 1 boinc boinc      6596 Jul 27 00:12 init_data.xml
[2025-07-27 00:16:07] -rw-r--r--. 2 boinc boinc 208253473 Jul 27 00:12 EVNT.45758490._000002.pool.root.1
[2025-07-27 00:16:07] -rw-r--r--. 2 boinc boinc     15095 Jul 27 00:12 start_atlas.sh
[2025-07-27 00:16:07] drwxrwx--x. 2 boinc boinc      4096 Jul 27 00:12 shared
[2025-07-27 00:16:07] -rw-r--r--. 2 boinc boinc    542866 Jul 27 00:12 input.tar.gz
[2025-07-27 00:16:07] -rw-r--r--. 1 boinc boinc         0 Jul 27 00:12 boinc_lockfile
[2025-07-27 00:16:07] -rw-r--r--. 1 boinc boinc      2550 Jul 27 00:12 pandaJob.out
[2025-07-27 00:16:07] -rw-------. 1 boinc boinc    980125 Jul 27 00:12 agis_schedconf.cvmfs.json
[2025-07-27 00:16:07] -rw-------. 1 boinc boinc   1593052 Jul 27 00:12 agis_ddmendpoints.agis.ALL.json
[2025-07-27 00:16:07] drwx------. 4 boinc boinc      4096 Jul 27 00:12 pilot3
[2025-07-27 00:16:07] -rw-r--r--. 1 boinc boinc       522 Jul 27 00:13 boinc_task_state.xml
[2025-07-27 00:16:07] -rw-------. 1 boinc boinc       964 Jul 27 00:13 memory_monitor_summary.json
[2025-07-27 00:16:07] -rw-------. 1 boinc boinc     20816 Jul 27 00:13 log.45758492._000031.job.log.tgz.1
[2025-07-27 00:16:07] -rw-------. 1 boinc boinc      8392 Jul 27 00:15 heartbeat.json
[2025-07-27 00:16:07] -rw-r--r--. 1 boinc boinc      8192 Jul 27 00:16 boinc_mmap_file
[2025-07-27 00:16:07] -rw-r--r--. 1 boinc boinc        22 Jul 27 00:16 wrapper_checkpoint.txt
[2025-07-27 00:16:07] -rw-------. 1 boinc boinc        95 Jul 27 00:16 pilot_heartbeat.json
[2025-07-27 00:16:07] -rw-------. 1 boinc boinc       892 Jul 27 00:16 pilotlog.txt
[2025-07-27 00:16:07] -rw-------. 1 boinc boinc     75386 Jul 27 00:16 log.45758492._000031.job.log.1
[2025-07-27 00:16:07] -rw-------. 1 boinc boinc       188 Jul 27 00:16 output.list
[2025-07-27 00:16:07] -rw-r--r--. 1 boinc boinc       620 Jul 27 00:16 runtime_log
[2025-07-27 00:16:07] -rw-------. 1 boinc boinc    112640 Jul 27 00:16 result.tar.gz
[2025-07-27 00:16:07] -rw-------. 1 boinc boinc       644 Jul 27 00:16 v4DMDmwR8z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmfx1KDm9Ch72m.diag
[2025-07-27 00:16:07] -rw-r--r--. 1 boinc boinc      8485 Jul 27 00:16 runtime_log.err
[2025-07-27 00:16:07] -rw-r--r--. 1 boinc boinc     21618 Jul 27 00:16 stderr.txt
[2025-07-27 00:16:07] No HITS result produced
[2025-07-27 00:16:07]  *** Contents of shared directory: ***
[2025-07-27 00:16:07] total 204036
[2025-07-27 00:16:07] -rw-r--r--. 2 boinc boinc 208253473 Jul 27 00:12 ATLAS.root_0
[2025-07-27 00:16:07] -rw-r--r--. 2 boinc boinc     15095 Jul 27 00:12 start_atlas.sh
[2025-07-27 00:16:07] -rw-r--r--. 2 boinc boinc    542866 Jul 27 00:12 input.tar.gz
[2025-07-27 00:16:07] -rw-------. 1 boinc boinc    112640 Jul 27 00:16 result.tar.gz
00:16:08 (179279): run_atlas exited; CPU time 18.860719
00:16:08 (179279): called boinc_finish(0)

</stderr_txt>
]]>

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