Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:53:15 (462610): wrapper (7.7.26015): starting
20:53:15 (462610): wrapper: running run_atlas (--nthreads 3)
[2025-07-27 20:53:15] Arguments: --nthreads 3
[2025-07-27 20:53:15] Threads: 3
[2025-07-27 20:53:15] Checking for CVMFS
[2025-07-27 20:53:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 20:53:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 20:53:15] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 20:53:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 20:53:15] 2.9.2.0 2452624 8555 87568 148821 0 57 30637637 36864001 0 130560 0 5831711 99.989 310332 2604 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-27 20:53:15] CVMFS is ok
[2025-07-27 20:53:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 20:53:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 20:53:15] Further information can be found at the LHC@home message board.
[2025-07-27 20:53:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 20:53:15] Checking for apptainer binary...
[2025-07-27 20:53:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 20:53:15] Running /usr/bin/apptainer --version
[2025-07-27 20:53:15] apptainer version 1.4.1-1.1
[2025-07-27 20:53:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 20:53:16] thA305
[2025-07-27 20:53:16] apptainer works
[2025-07-27 20:53:16] Set ATHENA_PROC_NUMBER=3
[2025-07-27 20:53:16] Set ATHENA_CORE_NUMBER=3
[2025-07-27 20:53:16] Starting ATLAS job with PandaID=6745950142
[2025-07-27 20:53:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 22:50:31]  *** The last 200 lines of the pilot log: ***
[2025-07-27 22:50:31] 2025-07-27 20:49:59,475 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3440.6052500000005
[2025-07-27 22:50:31] 2025-07-27 20:49:59,476 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745950142/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 22:50:31] 2025-07-27 20:49:59,477 | INFO     | extracted standard info from prmon json
[2025-07-27 22:50:31] 2025-07-27 20:49:59,477 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 22:50:31] 2025-07-27 20:49:59,477 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 22:50:31] 2025-07-27 20:49:59,477 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 22:50:31] 2025-07-27 20:49:59,477 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 22:50:31] 2025-07-27 20:49:59,478 | INFO     | fitting pss+swap vs Time
[2025-07-27 22:50:31] 2025-07-27 20:49:59,478 | INFO     | sum of square deviations: 471562330.0
[2025-07-27 22:50:31] 2025-07-27 20:49:59,478 | INFO     | sum of deviations: 2226157057.999997
[2025-07-27 22:50:31] 2025-07-27 20:49:59,478 | INFO     | mean x: 1753645897.0
[2025-07-27 22:50:31] 2025-07-27 20:49:59,478 | INFO     | mean y: 2360069.8
[2025-07-27 22:50:31] 2025-07-27 20:49:59,478 | INFO     | -- intersect: -8276272345.217726
[2025-07-27 22:50:31] 2025-07-27 20:49:59,478 | INFO     | intersect: -8276272345.217726
[2025-07-27 22:50:31] 2025-07-27 20:49:59,478 | INFO     | chi2: 1.5361366261340759
[2025-07-27 22:50:31] 2025-07-27 20:49:59,478 | INFO     | sum of square deviations: 412686807.5
[2025-07-27 22:50:31] 2025-07-27 20:49:59,478 | INFO     | sum of deviations: 2194076151.5
[2025-07-27 22:50:31] 2025-07-27 20:49:59,478 | INFO     | mean x: 1753645744.5
[2025-07-27 22:50:31] 2025-07-27 20:49:59,478 | INFO     | mean y: 2359986.6272727274
[2025-07-27 22:50:31] 2025-07-27 20:49:59,478 | INFO     | -- intersect: -9321011238.867771
[2025-07-27 22:50:31] 2025-07-27 20:49:59,479 | INFO     | intersect: -9321011238.867771
[2025-07-27 22:50:31] 2025-07-27 20:49:59,479 | INFO     | chi2: 1.5375717367501334
[2025-07-27 22:50:31] 2025-07-27 20:49:59,479 | INFO     | current chi2=1.5375717367501334 (change=-0.09342337078891066 %)
[2025-07-27 22:50:31] 2025-07-27 20:49:59,479 | INFO     | right removable region: 109
[2025-07-27 22:50:31] 2025-07-27 20:49:59,479 | INFO     | sum of square deviations: 412686807.5
[2025-07-27 22:50:31] 2025-07-27 20:49:59,479 | INFO     | sum of deviations: -11201627091.000004
[2025-07-27 22:50:31] 2025-07-27 20:49:59,479 | INFO     | mean x: 1753646049.5
[2025-07-27 22:50:31] 2025-07-27 20:49:59,479 | INFO     | mean y: 2393857.4545454546
[2025-07-27 22:50:31] 2025-07-27 20:49:59,479 | INFO     | -- intersect: 47601902102.225204
[2025-07-27 22:50:31] 2025-07-27 20:49:59,479 | INFO     | intersect: 47601902102.225204
[2025-07-27 22:50:31] 2025-07-27 20:49:59,479 | INFO     | chi2: 0.10896349679630214
[2025-07-27 22:50:31] 2025-07-27 20:49:59,479 | INFO     | current chi2=0.10896349679630214 (change=92.90665329225789 %)
[2025-07-27 22:50:31] 2025-07-27 20:49:59,479 | INFO     | sum of square deviations: 358927660.0
[2025-07-27 22:50:31] 2025-07-27 20:49:59,479 | INFO     | sum of deviations: -7619344263.0
[2025-07-27 22:50:31] 2025-07-27 20:49:59,479 | INFO     | mean x: 1753646202.0
[2025-07-27 22:50:31] 2025-07-27 20:49:59,479 | INFO     | mean y: 2383662.1904761903
[2025-07-27 22:50:31] 2025-07-27 20:49:59,479 | INFO     | -- intersect: 37228921534.86498
[2025-07-27 22:50:31] 2025-07-27 20:49:59,479 | INFO     | intersect: 37228921534.86498
[2025-07-27 22:50:31] 2025-07-27 20:49:59,479 | INFO     | chi2: 0.09343847991061745
[2025-07-27 22:50:31] 2025-07-27 20:49:59,480 | INFO     | current chi2=0.09343847991061745 (change=14.247906264156862 %)
[2025-07-27 22:50:31] 2025-07-27 20:49:59,480 | INFO     | left removable region: 20
[2025-07-27 22:50:31] 2025-07-27 20:49:59,480 | INFO     | sum of square deviations: 218571540.0
[2025-07-27 22:50:31] 2025-07-27 20:49:59,480 | INFO     | sum of deviations: 370335880.0
[2025-07-27 22:50:31] 2025-07-27 20:49:59,480 | INFO     | mean x: 1753646324.0
[2025-07-27 22:50:31] 2025-07-27 20:49:59,480 | INFO     | mean y: 2356773.786516854
[2025-07-27 22:50:31] 2025-07-27 20:49:59,480 | INFO     | -- intersect: -2968927386.115112
[2025-07-27 22:50:31] 2025-07-27 20:49:59,480 | INFO     | intersect: -2968927386.115112
[2025-07-27 22:50:31] 2025-07-27 20:49:59,480 | INFO     | chi2: 0.0018747973933659048
[2025-07-27 22:50:31] 2025-07-27 20:49:59,480 | INFO     | -- intersect: -2968927386.115112
[2025-07-27 22:50:31] 2025-07-27 20:49:59,480 | INFO     | current memory leak: 1.69 B/s (using 89 data points, chi2=0.00)
[2025-07-27 22:50:31] 2025-07-27 20:49:59,480 | INFO     | could have reported an average CPU frequency of 3901 MHz (7 samples)
[2025-07-27 22:50:31] 2025-07-27 20:49:59,480 | INFO     | ..............................
[2025-07-27 22:50:31] 2025-07-27 20:49:59,480 | INFO     | . Timing measurements:
[2025-07-27 22:50:31] 2025-07-27 20:49:59,480 | INFO     | . get job = 0 s
[2025-07-27 22:50:31] 2025-07-27 20:49:59,480 | INFO     | . initial setup = 1 s
[2025-07-27 22:50:31] 2025-07-27 20:49:59,480 | INFO     | . payload setup = 3 s
[2025-07-27 22:50:31] 2025-07-27 20:49:59,480 | INFO     | . stage-in = 0 s
[2025-07-27 22:50:31] 2025-07-27 20:49:59,480 | INFO     | . payload execution = 6972 s
[2025-07-27 22:50:31] 2025-07-27 20:49:59,480 | INFO     | . stage-out = 0 s
[2025-07-27 22:50:31] 2025-07-27 20:49:59,480 | INFO     | . log creation = 0 s
[2025-07-27 22:50:31] 2025-07-27 20:49:59,480 | INFO     | ..............................
[2025-07-27 22:50:31] 2025-07-27 20:49:59,511 | INFO     | 
[2025-07-27 22:50:31] 2025-07-27 20:49:59,511 | INFO     | job summary report
[2025-07-27 22:50:31] 2025-07-27 20:49:59,511 | INFO     | --------------------------------------------------
[2025-07-27 22:50:31] 2025-07-27 20:49:59,511 | INFO     | PanDA job id: 6745950142
[2025-07-27 22:50:31] 2025-07-27 20:49:59,511 | INFO     | task id: 45758441
[2025-07-27 22:50:31] 2025-07-27 20:49:59,511 | INFO     | errors: (none)
[2025-07-27 22:50:31] 2025-07-27 20:49:59,511 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 22:50:31] 2025-07-27 20:49:59,511 | INFO     | pilot state: finished 
[2025-07-27 22:50:31] 2025-07-27 20:49:59,511 | INFO     | transexitcode: 0
[2025-07-27 22:50:31] 2025-07-27 20:49:59,511 | INFO     | exeerrorcode: 0
[2025-07-27 22:50:31] 2025-07-27 20:49:59,511 | INFO     | exeerrordiag: 
[2025-07-27 22:50:31] 2025-07-27 20:49:59,511 | INFO     | exitcode: 0
[2025-07-27 22:50:31] 2025-07-27 20:49:59,511 | INFO     | exitmsg: OK
[2025-07-27 22:50:31] 2025-07-27 20:49:59,511 | INFO     | cpuconsumptiontime: 20213 s
[2025-07-27 22:50:31] 2025-07-27 20:49:59,511 | INFO     | nevents: 400
[2025-07-27 22:50:31] 2025-07-27 20:49:59,511 | INFO     | neventsw: 0
[2025-07-27 22:50:31] 2025-07-27 20:49:59,511 | INFO     | pid: 472738
[2025-07-27 22:50:31] 2025-07-27 20:49:59,511 | INFO     | pgrp: 472738
[2025-07-27 22:50:31] 2025-07-27 20:49:59,511 | INFO     | corecount: 3
[2025-07-27 22:50:31] 2025-07-27 20:49:59,511 | INFO     | event service: False
[2025-07-27 22:50:31] 2025-07-27 20:49:59,511 | INFO     | sizes: {0: 2397487, 1: 2397487, 3: 2397777, 11: 2397805, 6979: 2425215, 6980: 2425214, 6981: 2434402, 6982: 2434458, 6986: 2434652}
[2025-07-27 22:50:31] 2025-07-27 20:49:59,511 | INFO     | --------------------------------------------------
[2025-07-27 22:50:31] 2025-07-27 20:49:59,511 | INFO     | 
[2025-07-27 22:50:31] 2025-07-27 20:49:59,511 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-27 22:50:31] 2025-07-27 20:49:59,523 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 22:50:31] 2025-07-27 20:49:59,523 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 22:50:31] 2025-07-27 20:49:59,523 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 22:50:31] 2025-07-27 20:49:59,523 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 22:50:31] 2025-07-27 20:49:59,523 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 22:50:31] 2025-07-27 20:49:59,523 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 22:50:31] 2025-07-27 20:49:59,523 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 22:50:31] 2025-07-27 20:49:59,524 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 22:50:31] 2025-07-27 20:49:59,524 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 22:50:31] 2025-07-27 20:49:59,524 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 22:50:31] 2025-07-27 20:49:59,524 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 22:50:31] 2025-07-27 20:49:59,524 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 22:50:31] 2025-07-27 20:49:59,524 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 22:50:31] 2025-07-27 20:49:59,524 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 22:50:31] 2025-07-27 20:49:59,524 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 22:50:31] 2025-07-27 20:49:59,524 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 22:50:31] 2025-07-27 20:49:59,524 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 22:50:31] 2025-07-27 20:49:59,524 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 22:50:31] 2025-07-27 20:49:59,524 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 22:50:31] 2025-07-27 20:49:59,524 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 22:50:31] 2025-07-27 20:49:59,524 | INFO     | job 6745950142 has completed (purged errors)
[2025-07-27 22:50:31] 2025-07-27 20:49:59,524 | INFO     | overall cleanup function is called
[2025-07-27 22:50:31] 2025-07-27 20:49:59,890 | WARNING  | process 472738 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 22:50:31] 2025-07-27 20:49:59,922 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 22:50:31] 2025-07-27 20:49:59,963 | INFO     | number of running child processes to parent process 472738: 1
[2025-07-27 22:50:31] 2025-07-27 20:49:59,963 | INFO     | maximum number of monitored processes: 6
[2025-07-27 22:50:31] 2025-07-27 20:49:59,963 | INFO     | aborting job monitoring since job object (job id=6745950142) has expired
[2025-07-27 22:50:31] 2025-07-27 20:50:00,530 | INFO     | --- collectZombieJob: --- 10, [472738]
[2025-07-27 22:50:31] 2025-07-27 20:50:00,531 | INFO     | zombie collector waiting for pid 472738
[2025-07-27 22:50:31] 2025-07-27 20:50:00,531 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 22:50:31] 2025-07-27 20:50:00,531 | INFO     | collected zombie processes
[2025-07-27 22:50:31] 2025-07-27 20:50:00,531 | INFO     | will attempt to kill all subprocesses of pid=472738
[2025-07-27 22:50:31] 2025-07-27 20:50:00,577 | INFO     | process IDs to be killed: [472738] (in reverse order)
[2025-07-27 22:50:31] 2025-07-27 20:50:00,601 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 22:50:31] 2025-07-27 20:50:00,601 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 22:50:31] 2025-07-27 20:50:00,603 | INFO     | did not find any defunct processes belonging to 472738
[2025-07-27 22:50:31] 2025-07-27 20:50:00,604 | INFO     | did not find any defunct processes belonging to 472738
[2025-07-27 22:50:31] 2025-07-27 20:50:00,604 | INFO     | ready for new job
[2025-07-27 22:50:31] 2025-07-27 20:50:00,604 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 22:50:31] 2025-07-27 20:50:00,605 | INFO     | ***************************************
[2025-07-27 22:50:31] 2025-07-27 20:50:00,605 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 22:50:31] 2025-07-27 20:50:00,605 | INFO     | ***************************************
[2025-07-27 22:50:31] 2025-07-27 20:50:00,605 | INFO     | 
[2025-07-27 22:50:31] 2025-07-27 20:50:00,605 | INFO     | architecture information:
[2025-07-27 22:50:31] 2025-07-27 20:50:00,605 | INFO     | executing command: cat /etc/os-release
[2025-07-27 22:50:31] 2025-07-27 20:50:00,614 | INFO     | cat /etc/os-release:
[2025-07-27 22:50:31] NAME="CentOS Linux"
[2025-07-27 22:50:31] VERSION="7 (Core)"
[2025-07-27 22:50:31] ID="centos"
[2025-07-27 22:50:31] ID_LIKE="rhel fedora"
[2025-07-27 22:50:31] VERSION_ID="7"
[2025-07-27 22:50:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 22:50:31] ANSI_COLOR="0;31"
[2025-07-27 22:50:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 22:50:31] HOME_URL="https://www.centos.org/"
[2025-07-27 22:50:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 22:50:31] 
[2025-07-27 22:50:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 22:50:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 22:50:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 22:50:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 22:50:31] 
[2025-07-27 22:50:31] 2025-07-27 20:50:00,614 | INFO     | ***************************************
[2025-07-27 22:50:31] 2025-07-27 20:50:01,117 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-27 22:50:31] 2025-07-27 20:50:01,129 | INFO     | sufficient remaining disk space (228810817536 B)
[2025-07-27 22:50:31] 2025-07-27 20:50:01,130 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 22:50:31] 2025-07-27 20:50:01,130 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 22:50:31] 2025-07-27 20:50:01,130 | INFO     | update_server=False
[2025-07-27 22:50:31] 2025-07-27 20:50:01,130 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 22:50:31] 2025-07-27 20:50:01,130 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 22:50:31] 2025-07-27 20:50:01,130 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:50:31] 2025-07-27 20:50:01,130 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:50:31] 2025-07-27 20:50:01,130 | INFO     | aborting loop
[2025-07-27 22:50:31] 2025-07-27 20:50:01,413 | INFO     | all job control threads have been joined
[2025-07-27 22:50:31] 2025-07-27 20:50:01,645 | INFO     | all payload control threads have been joined
[2025-07-27 22:50:31] 2025-07-27 20:50:02,035 | INFO     | all data control threads have been joined
[2025-07-27 22:50:31] 2025-07-27 20:50:02,038 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 22:50:31] 2025-07-27 20:50:02,135 | INFO     | [job] retrieve thread has finished
[2025-07-27 22:50:31] 2025-07-27 20:50:02,136 | INFO     | [job] queue monitor thread has finished
[2025-07-27 22:50:31] 2025-07-27 20:50:02,136 | INFO     | [job] job monitor thread has finished
[2025-07-27 22:50:31] 2025-07-27 20:50:02,227 | INFO     | [payload] failed_post thread has finished
[2025-07-27 22:50:31] 2025-07-27 20:50:02,419 | INFO     | [job] control thread has finished
[2025-07-27 22:50:31] 2025-07-27 20:50:02,617 | INFO     | [job] validate thread has finished
[2025-07-27 22:50:31] 2025-07-27 20:50:02,651 | INFO     | [payload] control thread has finished
[2025-07-27 22:50:31] 2025-07-27 20:50:02,681 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 22:50:31] 2025-07-27 20:50:02,682 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 22:50:31] 2025-07-27 20:50:02,757 | INFO     | [payload] validate_post thread has finished
[2025-07-27 22:50:31] 2025-07-27 20:50:03,041 | INFO     | [data] control thread has finished
[2025-07-27 22:50:31] 2025-07-27 20:50:03,136 | INFO     | [data] copytool_out thread has finished
[2025-07-27 22:50:31] 2025-07-27 20:50:03,179 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 22:50:31] 2025-07-27 20:50:03,244 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 22:50:31] 2025-07-27 20:50:03,511 | INFO     | [data] copytool_in thread has finished
[2025-07-27 22:50:31] 2025-07-27 20:50:06,045 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 22:50:31] 2025-07-27 20:50:07,533 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140082519488320)>', '<ExcThread(monitor, started 140081876682496)>']
[2025-07-27 22:50:31] 2025-07-27 20:50:12,555 | INFO     | all workflow threads have been joined
[2025-07-27 22:50:31] 2025-07-27 20:50:12,556 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 22:50:31] 2025-07-27 20:50:12,556 | INFO     | traces error code: 0
[2025-07-27 22:50:31] 2025-07-27 20:50:12,556 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 22:50:31] 2025-07-27 20:50:30,954 | INFO     | PID=466247 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 22:50:31] 2025-07-27 20:50:30,954 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 22:50:31] 2025-07-27 20:50:30,954 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 22:50:31] 2025-07-27 20:50:30,954 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 22:50:31] 2025-07-27 20:50:30,955 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 22:50:31] 2025-07-27 20:50:30,955 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 22:50:31] 2025-07-27 20:50:30,955 | INFO     | [monitor] control thread has ended
[2025-07-27 22:50:31] 2025-07-27 20:50:31,001 [wrapper] ==== pilot stdout END ====
[2025-07-27 22:50:31] 2025-07-27 20:50:31,003 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 22:50:31] 2025-07-27 20:50:31,005 [wrapper] pilotpid: 466247
[2025-07-27 22:50:31] 2025-07-27 20:50:31,008 [wrapper] Pilot exit status: 0
[2025-07-27 22:50:31] 2025-07-27 20:50:31,014 [wrapper] pandaids: 6745950142
[2025-07-27 22:50:31] 2025-07-27 20:50:31,030 [wrapper] cleanup supervisor_pilot  488437 466248
[2025-07-27 22:50:31] 2025-07-27 20:50:31,033 [wrapper] Test setup, not cleaning
[2025-07-27 22:50:31] 2025-07-27 20:50:31,035 [wrapper] apfmon messages muted
[2025-07-27 22:50:31] 2025-07-27 20:50:31,037 [wrapper] ==== wrapper stdout END ====
[2025-07-27 22:50:31] 2025-07-27 20:50:31,039 [wrapper] ==== wrapper stderr END ====
[2025-07-27 22:50:31]  *** Error codes and diagnostics ***
[2025-07-27 22:50:31]     "exeErrorCode": 0,
[2025-07-27 22:50:31]     "exeErrorDiag": "",
[2025-07-27 22:50:31]     "pilotErrorCode": 0,
[2025-07-27 22:50:31]     "pilotErrorDiag": "",
[2025-07-27 22:50:31]  *** Listing of results directory ***
[2025-07-27 22:50:31] total 408508
[2025-07-27 22:50:31] -rw-r--r-- 1 boinc boinc    530466 Jul 27 03:40 pilot3.tar.gz
[2025-07-27 22:50:31] -rwx------ 1 boinc boinc     36292 Jul 27 03:59 runpilot2-wrapper.sh
[2025-07-27 22:50:31] -rw-r--r-- 1 boinc boinc      5112 Jul 27 03:59 queuedata.json
[2025-07-27 22:50:31] -rw-r--r-- 1 boinc boinc       100 Jul 27 20:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 22:50:31] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 20:53 run_atlas
[2025-07-27 22:50:31] -rw-r--r-- 1 boinc boinc       105 Jul 27 20:53 job.xml
[2025-07-27 22:50:31] -rw-r--r-- 2 boinc boinc 236237762 Jul 27 20:53 EVNT.45758439._000002.pool.root.1
[2025-07-27 22:50:31] -rw-r--r-- 2 boinc boinc    542890 Jul 27 20:53 input.tar.gz
[2025-07-27 22:50:31] -rw-r--r-- 2 boinc boinc     15095 Jul 27 20:53 start_atlas.sh
[2025-07-27 22:50:31] drwxrwx--x 2 boinc boinc      4096 Jul 27 20:53 shared
[2025-07-27 22:50:31] -rw-r--r-- 1 boinc boinc         0 Jul 27 20:53 boinc_setup_complete
[2025-07-27 22:50:31] -rw-r--r-- 1 boinc boinc      6517 Jul 27 20:53 init_data.xml
[2025-07-27 22:50:31] -rw-r--r-- 1 boinc boinc         0 Jul 27 20:53 boinc_lockfile
[2025-07-27 22:50:31] -rw-r--r-- 1 boinc boinc      2577 Jul 27 20:53 pandaJob.out
[2025-07-27 22:50:31] -rw------- 1 boinc boinc    980125 Jul 27 20:53 agis_schedconf.cvmfs.json
[2025-07-27 22:50:31] -rw------- 1 boinc boinc   1593052 Jul 27 20:53 agis_ddmendpoints.agis.ALL.json
[2025-07-27 22:50:31] drwx------ 4 boinc boinc      4096 Jul 27 20:53 pilot3
[2025-07-27 22:50:31] -rw------- 1 boinc boinc 176369940 Jul 27 22:49 HITS.45758441._000039.pool.root.1
[2025-07-27 22:50:31] -rw-r--r-- 1 boinc boinc       529 Jul 27 22:49 boinc_task_state.xml
[2025-07-27 22:50:31] -rw------- 1 boinc boinc      1020 Jul 27 22:49 memory_monitor_summary.json
[2025-07-27 22:50:31] -rw------- 1 boinc boinc    249249 Jul 27 22:49 log.45758441._000039.job.log.tgz.1
[2025-07-27 22:50:31] -rw------- 1 boinc boinc        95 Jul 27 22:49 pilot_heartbeat.json
[2025-07-27 22:50:31] -rw------- 1 boinc boinc      7744 Jul 27 22:49 heartbeat.json
[2025-07-27 22:50:31] -rw-r--r-- 1 boinc boinc        27 Jul 27 22:50 wrapper_checkpoint.txt
[2025-07-27 22:50:31] -rw-r--r-- 1 boinc boinc      8192 Jul 27 22:50 boinc_mmap_file
[2025-07-27 22:50:31] -rw------- 1 boinc boinc       816 Jul 27 22:50 pilotlog.txt
[2025-07-27 22:50:31] -rw------- 1 boinc boinc    660557 Jul 27 22:50 log.45758441._000039.job.log.1
[2025-07-27 22:50:31] -rw------- 1 boinc boinc       357 Jul 27 22:50 output.list
[2025-07-27 22:50:31] -rw-r--r-- 1 boinc boinc       620 Jul 27 22:50 runtime_log
[2025-07-27 22:50:31] -rw------- 1 boinc boinc    931840 Jul 27 22:50 result.tar.gz
[2025-07-27 22:50:31] -rw-r--r-- 1 boinc boinc      8734 Jul 27 22:50 runtime_log.err
[2025-07-27 22:50:31] -rw------- 1 boinc boinc       659 Jul 27 22:50 mLrNDmwq5z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmorTLDm748jum.diag
[2025-07-27 22:50:31] -rw-r--r-- 1 boinc boinc     21160 Jul 27 22:50 stderr.txt
[2025-07-27 22:50:31] HITS file was successfully produced:
[2025-07-27 22:50:31] -rw------- 1 boinc boinc 176369940 Jul 27 22:49 shared/HITS.pool.root.1
[2025-07-27 22:50:31]  *** Contents of shared directory: ***
[2025-07-27 22:50:31] total 404412
[2025-07-27 22:50:31] -rw-r--r-- 2 boinc boinc 236237762 Jul 27 20:53 ATLAS.root_0
[2025-07-27 22:50:31] -rw-r--r-- 2 boinc boinc    542890 Jul 27 20:53 input.tar.gz
[2025-07-27 22:50:31] -rw-r--r-- 2 boinc boinc     15095 Jul 27 20:53 start_atlas.sh
[2025-07-27 22:50:31] -rw------- 1 boinc boinc 176369940 Jul 27 22:49 HITS.pool.root.1
[2025-07-27 22:50:31] -rw------- 1 boinc boinc    931840 Jul 27 22:50 result.tar.gz
22:50:32 (462610): run_atlas exited; CPU time 20243.852667
22:50:32 (462610): called boinc_finish(0)

</stderr_txt>
]]>

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