Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:17:21 (1684823): wrapper (7.7.26015): starting
04:17:21 (1684823): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 04:17:21] Arguments: --nthreads 12
[2025-07-27 04:17:21] Threads: 12
[2025-07-27 04:17:21] Checking for CVMFS
[2025-07-27 04:17:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 04:17:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 04:17:21] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 04:17:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 04:17:21] 2.13.0.0 1190652 18114 329268 148805 2 120 30789505 32935936 5586 16776704 0 33052921 99.726 57189488 29263 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 04:17:21] CVMFS is ok
[2025-07-27 04:17:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 04:17:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 04:17:21] Further information can be found at the LHC@home message board.
[2025-07-27 04:17:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 04:17:21] Checking for apptainer binary...
[2025-07-27 04:17:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 04:17:21] Running /usr/bin/apptainer --version
[2025-07-27 04:17:21] apptainer version 1.4.1-1.el9
[2025-07-27 04:17:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 04:17:22] c6-1-26-3.aglt2.org
[2025-07-27 04:17:22] apptainer works
[2025-07-27 04:17:22] Set ATHENA_PROC_NUMBER=12
[2025-07-27 04:17:22] Set ATHENA_CORE_NUMBER=12
[2025-07-27 04:17:22] Starting ATLAS job with PandaID=6745948416
[2025-07-27 04:17:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 05:45:19]  *** The last 200 lines of the pilot log: ***
[2025-07-27 05:45:19]  scope=mc23_13p6TeV
[2025-07-27 05:45:19]  status=None
[2025-07-27 05:45:19]  status_code=0
[2025-07-27 05:45:19]  storage_token=
[2025-07-27 05:45:19]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745948416/log.45759912._000116.job.log.tgz.1
[2025-07-27 05:45:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5e/0b/log.45759912._000116.job.log.tgz.1
[2025-07-27 05:45:19]  workdir=None
[2025-07-27 05:45:19] ]
[2025-07-27 05:45:19] 2025-07-27 09:44:48,140 | INFO     | transferring file log.45759912._000116.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745948416/log.45759912._000116.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 05:45:19] 2025-07-27 09:44:48,140 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745948416/log.45759912._000116.job.log.tgz.1 /tmp/boinchome/slots/0/log.45759912._000116.job
[2025-07-27 05:45:19] 2025-07-27 09:44:48,163 | INFO     | adding to output.list: log.45759912._000116.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5e/0b/log.45759912._000116.job.log.tg
[2025-07-27 05:45:19] 2025-07-27 09:44:48,165 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 05:45:19] 2025-07-27 09:44:48,165 | INFO     | summary of transferred files:
[2025-07-27 05:45:19] 2025-07-27 09:44:48,165 | INFO     |  -- lfn=log.45759912._000116.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 05:45:19] 2025-07-27 09:44:48,165 | INFO     | stage-out finished correctly
[2025-07-27 05:45:19] 2025-07-27 09:44:49,048 | WARNING  | process 1695680 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 05:45:19] 2025-07-27 09:44:49,048 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745948416/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 05:45:19] 2025-07-27 09:44:49,323 | INFO     | number of running child processes to parent process 1695680: 1
[2025-07-27 05:45:19] 2025-07-27 09:44:49,323 | INFO     | maximum number of monitored processes: 6
[2025-07-27 05:45:19] 2025-07-27 09:44:50,188 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 05:45:19] 2025-07-27 09:44:51,827 | INFO     | monitor loop #386: job 0:6745948416 is in state 'finished'
[2025-07-27 05:45:19] 2025-07-27 09:44:51,828 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 05:45:19] 2025-07-27 09:44:53,227 | INFO     | job 6745948416 has state=finished
[2025-07-27 05:45:19] 2025-07-27 09:44:53,227 | INFO     | preparing for final server update for job 6745948416 in state='finished'
[2025-07-27 05:45:19] 2025-07-27 09:44:53,228 | INFO     | this job has now completed (state=finished)
[2025-07-27 05:45:19] 2025-07-27 09:44:53,228 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 05:45:19] 2025-07-27 09:44:53,228 | INFO     | log transfer has been attempted: DONE
[2025-07-27 05:45:19] 2025-07-27 09:44:53,229 | INFO     | job 6745948416 has finished - writing final server update
[2025-07-27 05:45:19] 2025-07-27 09:44:53,229 | INFO     | total number of processed events: 400 (read)
[2025-07-27 05:45:19] 2025-07-27 09:44:53,230 | INFO     | executing command: lscpu
[2025-07-27 05:45:19] 2025-07-27 09:44:53,290 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 05:45:19] 2025-07-27 09:44:54,332 | INFO     | monitor loop #387: job 0:6745948416 is in state 'finished'
[2025-07-27 05:45:19] 2025-07-27 09:44:54,332 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 05:45:19] 2025-07-27 09:44:56,836 | INFO     | monitor loop #388: job 0:6745948416 is in state 'finished'
[2025-07-27 05:45:19] 2025-07-27 09:44:56,836 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 05:45:19] 2025-07-27 09:44:58,154 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 05:45:19] 2025-07-27 09:44:58,158 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2727.1643928571425
[2025-07-27 05:45:19] 2025-07-27 09:44:58,167 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745948416/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 05:45:19] 2025-07-27 09:44:58,168 | INFO     | extracted standard info from prmon json
[2025-07-27 05:45:19] 2025-07-27 09:44:58,168 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 05:45:19] 2025-07-27 09:44:58,168 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 05:45:19] 2025-07-27 09:44:58,169 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 05:45:19] 2025-07-27 09:44:58,169 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 05:45:19] 2025-07-27 09:44:58,170 | INFO     | fitting pss+swap vs Time
[2025-07-27 05:45:19] 2025-07-27 09:44:58,171 | INFO     | sum of square deviations: 152858680.0
[2025-07-27 05:45:19] 2025-07-27 09:44:58,171 | INFO     | sum of deviations: -16241796438.0
[2025-07-27 05:45:19] 2025-07-27 09:44:58,171 | INFO     | mean x: 1753606964.0
[2025-07-27 05:45:19] 2025-07-27 09:44:58,171 | INFO     | mean y: 2625025.658227848
[2025-07-27 05:45:19] 2025-07-27 09:44:58,171 | INFO     | -- intersect: 186329808680.1762
[2025-07-27 05:45:19] 2025-07-27 09:44:58,171 | INFO     | intersect: 186329808680.1762
[2025-07-27 05:45:19] 2025-07-27 09:44:58,172 | INFO     | chi2: 0.17859429367894336
[2025-07-27 05:45:19] 2025-07-27 09:44:58,172 | INFO     | -- intersect: 186329808680.1762
[2025-07-27 05:45:19] 2025-07-27 09:44:58,172 | INFO     | current memory leak: -106.25 B/s (using 79 data points, chi2=0.18)
[2025-07-27 05:45:19] 2025-07-27 09:44:58,172 | INFO     | could have reported an average CPU frequency of 2722 MHz (6 samples)
[2025-07-27 05:45:19] 2025-07-27 09:44:58,172 | INFO     | ..............................
[2025-07-27 05:45:19] 2025-07-27 09:44:58,173 | INFO     | . Timing measurements:
[2025-07-27 05:45:19] 2025-07-27 09:44:58,173 | INFO     | . get job = 0 s
[2025-07-27 05:45:19] 2025-07-27 09:44:58,173 | INFO     | . initial setup = 2 s
[2025-07-27 05:45:19] 2025-07-27 09:44:58,173 | INFO     | . payload setup = 6 s
[2025-07-27 05:45:19] 2025-07-27 09:44:58,173 | INFO     | . stage-in = 0 s
[2025-07-27 05:45:19] 2025-07-27 09:44:58,173 | INFO     | . payload execution = 5211 s
[2025-07-27 05:45:19] 2025-07-27 09:44:58,173 | INFO     | . stage-out = 0 s
[2025-07-27 05:45:19] 2025-07-27 09:44:58,173 | INFO     | . log creation = 0 s
[2025-07-27 05:45:19] 2025-07-27 09:44:58,173 | INFO     | ..............................
[2025-07-27 05:45:19] 2025-07-27 09:44:58,257 | INFO     | 
[2025-07-27 05:45:19] 2025-07-27 09:44:58,257 | INFO     | job summary report
[2025-07-27 05:45:19] 2025-07-27 09:44:58,257 | INFO     | --------------------------------------------------
[2025-07-27 05:45:19] 2025-07-27 09:44:58,257 | INFO     | PanDA job id: 6745948416
[2025-07-27 05:45:19] 2025-07-27 09:44:58,257 | INFO     | task id: 45759912
[2025-07-27 05:45:19] 2025-07-27 09:44:58,258 | INFO     | errors: (none)
[2025-07-27 05:45:19] 2025-07-27 09:44:58,258 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 05:45:19] 2025-07-27 09:44:58,258 | INFO     | pilot state: finished 
[2025-07-27 05:45:19] 2025-07-27 09:44:58,258 | INFO     | transexitcode: 0
[2025-07-27 05:45:19] 2025-07-27 09:44:58,258 | INFO     | exeerrorcode: 0
[2025-07-27 05:45:19] 2025-07-27 09:44:58,258 | INFO     | exeerrordiag: 
[2025-07-27 05:45:19] 2025-07-27 09:44:58,258 | INFO     | exitcode: 0
[2025-07-27 05:45:19] 2025-07-27 09:44:58,258 | INFO     | exitmsg: OK
[2025-07-27 05:45:19] 2025-07-27 09:44:58,258 | INFO     | cpuconsumptiontime: 57660 s
[2025-07-27 05:45:19] 2025-07-27 09:44:58,258 | INFO     | nevents: 400
[2025-07-27 05:45:19] 2025-07-27 09:44:58,258 | INFO     | neventsw: 0
[2025-07-27 05:45:19] 2025-07-27 09:44:58,259 | INFO     | pid: 1695680
[2025-07-27 05:45:19] 2025-07-27 09:44:58,259 | INFO     | pgrp: 1695680
[2025-07-27 05:45:19] 2025-07-27 09:44:58,259 | INFO     | corecount: 12
[2025-07-27 05:45:19] 2025-07-27 09:44:58,259 | INFO     | event service: False
[2025-07-27 05:45:19] 2025-07-27 09:44:58,259 | INFO     | sizes: {0: 2397351, 1: 2397493, 5: 2397755, 11: 2397811, 5219: 2424221, 5220: 2433219, 5222: 2433403, 5230: 2433597}
[2025-07-27 05:45:19] 2025-07-27 09:44:58,259 | INFO     | --------------------------------------------------
[2025-07-27 05:45:19] 2025-07-27 09:44:58,259 | INFO     | 
[2025-07-27 05:45:19] 2025-07-27 09:44:58,259 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 05:45:19] 2025-07-27 09:44:58,281 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 05:45:19] 2025-07-27 09:44:58,281 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 05:45:19] 2025-07-27 09:44:58,281 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 05:45:19] 2025-07-27 09:44:58,281 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 05:45:19] 2025-07-27 09:44:58,281 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 05:45:19] 2025-07-27 09:44:58,282 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 05:45:19] 2025-07-27 09:44:58,282 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 05:45:19] 2025-07-27 09:44:58,282 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 05:45:19] 2025-07-27 09:44:58,282 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 05:45:19] 2025-07-27 09:44:58,282 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 05:45:19] 2025-07-27 09:44:58,282 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 05:45:19] 2025-07-27 09:44:58,282 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 05:45:19] 2025-07-27 09:44:58,282 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 05:45:19] 2025-07-27 09:44:58,282 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 05:45:19] 2025-07-27 09:44:58,282 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 05:45:19] 2025-07-27 09:44:58,282 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 05:45:19] 2025-07-27 09:44:58,282 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 05:45:19] 2025-07-27 09:44:58,282 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 05:45:19] 2025-07-27 09:44:58,282 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 05:45:19] 2025-07-27 09:44:58,282 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 05:45:19] 2025-07-27 09:44:58,283 | INFO     | job 6745948416 has completed (purged errors)
[2025-07-27 05:45:19] 2025-07-27 09:44:58,283 | INFO     | overall cleanup function is called
[2025-07-27 05:45:19] 2025-07-27 09:44:59,291 | INFO     | --- collectZombieJob: --- 10, [1695680]
[2025-07-27 05:45:19] 2025-07-27 09:44:59,291 | INFO     | zombie collector waiting for pid 1695680
[2025-07-27 05:45:19] 2025-07-27 09:44:59,291 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 05:45:19] 2025-07-27 09:44:59,291 | INFO     | collected zombie processes
[2025-07-27 05:45:19] 2025-07-27 09:44:59,292 | INFO     | will attempt to kill all subprocesses of pid=1695680
[2025-07-27 05:45:19] 2025-07-27 09:45:00,030 | INFO     | PID=1688581 has CPU usage=11.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 05:45:19] 2025-07-27 09:45:00,030 | INFO     | .. there are 10 such processes running
[2025-07-27 05:45:19] 2025-07-27 09:45:00,032 | INFO     | process IDs to be killed: [1695680] (in reverse order)
[2025-07-27 05:45:19] 2025-07-27 09:45:00,130 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 05:45:19] 2025-07-27 09:45:00,131 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 05:45:19] 2025-07-27 09:45:00,142 | INFO     | did not find any defunct processes belonging to 1695680
[2025-07-27 05:45:19] 2025-07-27 09:45:00,152 | INFO     | did not find any defunct processes belonging to 1695680
[2025-07-27 05:45:19] 2025-07-27 09:45:00,152 | INFO     | ready for new job
[2025-07-27 05:45:19] 2025-07-27 09:45:00,152 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 05:45:19] 2025-07-27 09:45:00,155 | INFO     | ***************************************
[2025-07-27 05:45:19] 2025-07-27 09:45:00,155 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 05:45:19] 2025-07-27 09:45:00,155 | INFO     | ***************************************
[2025-07-27 05:45:19] 2025-07-27 09:45:00,155 | INFO     | 
[2025-07-27 05:45:19] 2025-07-27 09:45:00,172 | INFO     | architecture information:
[2025-07-27 05:45:19] 2025-07-27 09:45:00,173 | INFO     | executing command: cat /etc/os-release
[2025-07-27 05:45:19] 2025-07-27 09:45:00,191 | INFO     | cat /etc/os-release:
[2025-07-27 05:45:19] NAME="CentOS Linux"
[2025-07-27 05:45:19] VERSION="7 (Core)"
[2025-07-27 05:45:19] ID="centos"
[2025-07-27 05:45:19] ID_LIKE="rhel fedora"
[2025-07-27 05:45:19] VERSION_ID="7"
[2025-07-27 05:45:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 05:45:19] ANSI_COLOR="0;31"
[2025-07-27 05:45:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 05:45:19] HOME_URL="https://www.centos.org/"
[2025-07-27 05:45:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 05:45:19] 
[2025-07-27 05:45:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 05:45:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 05:45:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 05:45:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 05:45:19] 
[2025-07-27 05:45:19] 2025-07-27 09:45:00,191 | INFO     | ***************************************
[2025-07-27 05:45:19] 2025-07-27 09:45:00,694 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 05:45:19] 2025-07-27 09:45:00,712 | INFO     | sufficient remaining disk space (76294389760 B)
[2025-07-27 05:45:19] 2025-07-27 09:45:00,712 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 05:45:19] 2025-07-27 09:45:00,712 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 05:45:19] 2025-07-27 09:45:00,713 | INFO     | update_server=False
[2025-07-27 05:45:19] 2025-07-27 09:45:00,713 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 05:45:19] 2025-07-27 09:45:00,713 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 05:45:19] 2025-07-27 09:45:00,713 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-27 05:45:19] 2025-07-27 09:45:00,713 | INFO     | aborting loop
[2025-07-27 05:45:19] 2025-07-27 09:45:00,714 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 05:45:19] 2025-07-27 09:45:00,714 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 05:45:19] 2025-07-27 09:45:00,714 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 05:45:19] 2025-07-27 09:45:00,783 | INFO     | all payload control threads have been joined
[2025-07-27 05:45:19] 2025-07-27 09:45:00,785 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 05:45:19] 2025-07-27 09:45:01,075 | INFO     | all data control threads have been joined
[2025-07-27 05:45:19] 2025-07-27 09:45:01,283 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 05:45:19] 2025-07-27 09:45:01,387 | INFO     | all job control threads have been joined
[2025-07-27 05:45:19] 2025-07-27 09:45:01,718 | INFO     | [job] retrieve thread has finished
[2025-07-27 05:45:19] 2025-07-27 09:45:01,719 | INFO     | [job] job monitor thread has finished
[2025-07-27 05:45:19] 2025-07-27 09:45:01,788 | INFO     | [payload] control thread has finished
[2025-07-27 05:45:19] 2025-07-27 09:45:02,006 | INFO     | [payload] validate_post thread has finished
[2025-07-27 05:45:19] 2025-07-27 09:45:02,080 | INFO     | [data] control thread has finished
[2025-07-27 05:45:19] 2025-07-27 09:45:02,392 | INFO     | [job] control thread has finished
[2025-07-27 05:45:19] 2025-07-27 09:45:02,401 | INFO     | [job] validate thread has finished
[2025-07-27 05:45:19] 2025-07-27 09:45:02,521 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 05:45:19] 2025-07-27 09:45:02,674 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 05:45:19] 2025-07-27 09:45:02,730 | INFO     | [data] copytool_in thread has finished
[2025-07-27 05:45:19] 2025-07-27 09:45:02,797 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 05:45:19] 2025-07-27 09:45:03,127 | INFO     | [payload] failed_post thread has finished
[2025-07-27 05:45:19] 2025-07-27 09:45:03,268 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 05:45:19] 2025-07-27 09:45:03,289 | INFO     | [data] copytool_out thread has finished
[2025-07-27 05:45:19] 2025-07-27 09:45:04,273 | INFO     | [job] queue monitor thread has finished
[2025-07-27 05:45:19] 2025-07-27 09:45:04,791 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 05:45:19] 2025-07-27 09:45:11,557 | INFO     | job.realtimelogging is not enabled
[2025-07-27 05:45:19] 2025-07-27 09:45:12,562 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 05:45:19] 2025-07-27 09:45:14,048 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140113516816192)>', '<ExcThread(monitor, started 140112880977664)>']
[2025-07-27 05:45:19] 2025-07-27 09:45:14,784 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 05:45:19] 2025-07-27 09:45:14,784 | INFO     | [monitor] control thread has ended
[2025-07-27 05:45:19] 2025-07-27 09:45:19,074 | INFO     | all workflow threads have been joined
[2025-07-27 05:45:19] 2025-07-27 09:45:19,074 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 05:45:19] 2025-07-27 09:45:19,074 | INFO     | traces error code: 0
[2025-07-27 05:45:19] 2025-07-27 09:45:19,075 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 05:45:19] 2025-07-27 09:45:19,269 [wrapper] ==== pilot stdout END ====
[2025-07-27 05:45:19] 2025-07-27 09:45:19,273 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 05:45:19] 2025-07-27 09:45:19,276 [wrapper] pilotpid: 1688581
[2025-07-27 05:45:19] 2025-07-27 09:45:19,279 [wrapper] Pilot exit status: 0
[2025-07-27 05:45:19] 2025-07-27 09:45:19,293 [wrapper] pandaids: 6745948416
[2025-07-27 05:45:19] 2025-07-27 09:45:19,359 [wrapper] cleanup supervisor_pilot 1999681 1688582
[2025-07-27 05:45:19] 2025-07-27 09:45:19,364 [wrapper] Test setup, not cleaning
[2025-07-27 05:45:19] 2025-07-27 09:45:19,368 [wrapper] apfmon messages muted
[2025-07-27 05:45:19] 2025-07-27 09:45:19,372 [wrapper] ==== wrapper stdout END ====
[2025-07-27 05:45:19] 2025-07-27 09:45:19,376 [wrapper] ==== wrapper stderr END ====
[2025-07-27 05:45:19]  *** Error codes and diagnostics ***
[2025-07-27 05:45:19]     "exeErrorCode": 0,
[2025-07-27 05:45:19]     "exeErrorDiag": "",
[2025-07-27 05:45:19]     "pilotErrorCode": 0,
[2025-07-27 05:45:19]     "pilotErrorDiag": "",
[2025-07-27 05:45:19]  *** Listing of results directory ***
[2025-07-27 05:45:19] total 397320
[2025-07-27 05:45:19] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 21:40 pilot3.tar.gz
[2025-07-27 05:45:19] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 21:48 queuedata.json
[2025-07-27 05:45:19] -rwx------. 1 boincer umatlas     36292 Jul 26 21:50 runpilot2-wrapper.sh
[2025-07-27 05:45:19] -rw-r--r--. 1 boincer umatlas       100 Jul 27 04:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 05:45:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 04:17 run_atlas
[2025-07-27 05:45:19] -rw-r--r--. 1 boincer umatlas       105 Jul 27 04:17 job.xml
[2025-07-27 05:45:19] -rw-r--r--. 2 boincer umatlas 233252238 Jul 27 04:17 EVNT.45759910._000005.pool.root.1
[2025-07-27 05:45:19] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 04:17 start_atlas.sh
[2025-07-27 05:45:19] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 04:17 shared
[2025-07-27 05:45:19] -rw-r--r--. 2 boincer umatlas    542879 Jul 27 04:17 input.tar.gz
[2025-07-27 05:45:19] -rw-r--r--. 1 boincer umatlas         0 Jul 27 04:17 boinc_lockfile
[2025-07-27 05:45:19] -rw-r--r--. 1 boincer umatlas      2556 Jul 27 04:17 pandaJob.out
[2025-07-27 05:45:19] -rw-------. 1 boincer umatlas    980109 Jul 27 04:17 agis_schedconf.cvmfs.json
[2025-07-27 05:45:19] -rw-------. 1 boincer umatlas   1593052 Jul 27 04:17 agis_ddmendpoints.agis.ALL.json
[2025-07-27 05:45:19] drwx------. 4 boincer umatlas      4096 Jul 27 04:17 pilot3
[2025-07-27 05:45:19] -rw-r--r--. 1 boincer umatlas      6842 Jul 27 05:37 init_data.xml
[2025-07-27 05:45:19] -rw-------. 1 boincer umatlas 167940558 Jul 27 05:44 HITS.45759912._000116.pool.root.1
[2025-07-27 05:45:19] -rw-r--r--. 1 boincer umatlas       529 Jul 27 05:44 boinc_task_state.xml
[2025-07-27 05:45:19] -rw-------. 1 boincer umatlas        95 Jul 27 05:44 pilot_heartbeat.json
[2025-07-27 05:45:19] -rw-------. 1 boincer umatlas      1041 Jul 27 05:44 memory_monitor_summary.json
[2025-07-27 05:45:19] -rw-------. 1 boincer umatlas    374704 Jul 27 05:44 log.45759912._000116.job.log.tgz.1
[2025-07-27 05:45:19] -rw-------. 1 boincer umatlas      7821 Jul 27 05:44 heartbeat.json
[2025-07-27 05:45:19] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 05:45 boinc_mmap_file
[2025-07-27 05:45:19] -rw-r--r--. 1 boincer umatlas        27 Jul 27 05:45 wrapper_checkpoint.txt
[2025-07-27 05:45:19] -rw-------. 1 boincer umatlas      4552 Jul 27 05:45 pilotlog.txt
[2025-07-27 05:45:19] -rw-------. 1 boincer umatlas    515267 Jul 27 05:45 log.45759912._000116.job.log.1
[2025-07-27 05:45:19] -rw-------. 1 boincer umatlas       357 Jul 27 05:45 output.list
[2025-07-27 05:45:19] -rw-r--r--. 1 boincer umatlas       620 Jul 27 05:45 runtime_log
[2025-07-27 05:45:19] -rw-------. 1 boincer umatlas    911360 Jul 27 05:45 result.tar.gz
[2025-07-27 05:45:19] -rw-r--r--. 1 boincer umatlas      8667 Jul 27 05:45 runtime_log.err
[2025-07-27 05:45:19] -rw-------. 1 boincer umatlas       655 Jul 27 05:45 hPMODm9h5z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcrTLDm3WbCNo.diag
[2025-07-27 05:45:19] -rw-r--r--. 1 boincer umatlas     22018 Jul 27 05:45 stderr.txt
[2025-07-27 05:45:19] HITS file was successfully produced:
[2025-07-27 05:45:19] -rw-------. 1 boincer umatlas 167940558 Jul 27 05:44 shared/HITS.pool.root.1
[2025-07-27 05:45:19]  *** Contents of shared directory: ***
[2025-07-27 05:45:19] total 393240
[2025-07-27 05:45:19] -rw-r--r--. 2 boincer umatlas 233252238 Jul 27 04:17 ATLAS.root_0
[2025-07-27 05:45:19] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 04:17 start_atlas.sh
[2025-07-27 05:45:19] -rw-r--r--. 2 boincer umatlas    542879 Jul 27 04:17 input.tar.gz
[2025-07-27 05:45:19] -rw-------. 1 boincer umatlas 167940558 Jul 27 05:44 HITS.pool.root.1
[2025-07-27 05:45:19] -rw-------. 1 boincer umatlas    911360 Jul 27 05:45 result.tar.gz
05:45:21 (1684823): run_atlas exited; CPU time 57770.334638
05:45:21 (1684823): called boinc_finish(0)

</stderr_txt>
]]>

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