Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:54:12 (3406946): wrapper (7.7.26015): starting
02:54:12 (3406946): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 02:54:12] Arguments: --nthreads 8
[2025-07-27 02:54:12] Threads: 8
[2025-07-27 02:54:12] Checking for CVMFS
[2025-07-27 02:54:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 02:54:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 02:54:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 02:54:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 02:54:14] 2.12.6.0 1539006 18029 354228 148803 0 602 16817256 32935937 18056 16776704 1 54678101 99.717 80766870 20071 http://cvmfs-s1.hpc.swin.edu.au:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 02:54:14] CVMFS is ok
[2025-07-27 02:54:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 02:54:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 02:54:14] Further information can be found at the LHC@home message board.
[2025-07-27 02:54:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 02:54:14] Checking for apptainer binary...
[2025-07-27 02:54:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 02:54:14] Running /usr/bin/apptainer --version
[2025-07-27 02:54:14] apptainer version 1.4.1-1.el9
[2025-07-27 02:54:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 02:54:15] c6-12-29-4.aglt2.org
[2025-07-27 02:54:15] apptainer works
[2025-07-27 02:54:15] Set ATHENA_PROC_NUMBER=8
[2025-07-27 02:54:15] Set ATHENA_CORE_NUMBER=8
[2025-07-27 02:54:15] Starting ATLAS job with PandaID=6745948381
[2025-07-27 02:54:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 06:30:14]  *** The last 200 lines of the pilot log: ***
[2025-07-27 06:30:14] 2025-07-27 10:29:37,572 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 06:30:14] 2025-07-27 10:29:39,904 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 06:30:14] 2025-07-27 10:29:39,918 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2473.79471875
[2025-07-27 06:30:14] 2025-07-27 10:29:39,935 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745948381/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 06:30:14] 2025-07-27 10:29:39,936 | INFO     | extracted standard info from prmon json
[2025-07-27 06:30:14] 2025-07-27 10:29:39,936 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 06:30:14] 2025-07-27 10:29:39,936 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 06:30:14] 2025-07-27 10:29:39,937 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 06:30:14] 2025-07-27 10:29:39,937 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 06:30:14] 2025-07-27 10:29:39,942 | INFO     | fitting pss+swap vs Time
[2025-07-27 06:30:14] 2025-07-27 10:29:39,942 | INFO     | sum of square deviations: 2830780564.00955
[2025-07-27 06:30:14] 2025-07-27 10:29:39,944 | INFO     | sum of deviations: 36969252808.10528
[2025-07-27 06:30:14] 2025-07-27 10:29:39,944 | INFO     | mean x: 1753605767.3014355
[2025-07-27 06:30:14] 2025-07-27 10:29:39,944 | INFO     | mean y: 2146087.3157894737
[2025-07-27 06:30:14] 2025-07-27 10:29:39,944 | INFO     | -- intersect: -22899485978.891758
[2025-07-27 06:30:14] 2025-07-27 10:29:39,945 | INFO     | intersect: -22899485978.891758
[2025-07-27 06:30:14] 2025-07-27 10:29:39,945 | INFO     | chi2: 1.8776416525271584
[2025-07-27 06:30:14] 2025-07-27 10:29:39,945 | INFO     | sum of square deviations: 2632451873.5441127
[2025-07-27 06:30:14] 2025-07-27 10:29:39,947 | INFO     | sum of deviations: 40133573541.67649
[2025-07-27 06:30:14] 2025-07-27 10:29:39,947 | INFO     | mean x: 1753605614.8088236
[2025-07-27 06:30:14] 2025-07-27 10:29:39,947 | INFO     | mean y: 2148482.401960784
[2025-07-27 06:30:14] 2025-07-27 10:29:39,947 | INFO     | -- intersect: -26732797980.37043
[2025-07-27 06:30:14] 2025-07-27 10:29:39,947 | INFO     | intersect: -26732797980.37043
[2025-07-27 06:30:14] 2025-07-27 10:29:39,948 | INFO     | chi2: 1.8351494353187205
[2025-07-27 06:30:14] 2025-07-27 10:29:39,948 | INFO     | current chi2=1.8351494353187205 (change=2.263063196922942 %)
[2025-07-27 06:30:14] 2025-07-27 10:29:39,948 | INFO     | right removable region: 203
[2025-07-27 06:30:14] 2025-07-27 10:29:39,948 | INFO     | sum of square deviations: 2632413443.5441127
[2025-07-27 06:30:14] 2025-07-27 10:29:39,949 | INFO     | sum of deviations: 3081077823.6029434
[2025-07-27 06:30:14] 2025-07-27 10:29:39,950 | INFO     | mean x: 1753605919.8088236
[2025-07-27 06:30:14] 2025-07-27 10:29:39,950 | INFO     | mean y: 2171965.5539215687
[2025-07-27 06:30:14] 2025-07-27 10:29:39,950 | INFO     | -- intersect: -2050315771.1701245
[2025-07-27 06:30:14] 2025-07-27 10:29:39,950 | INFO     | intersect: -2050315771.1701245
[2025-07-27 06:30:14] 2025-07-27 10:29:39,950 | INFO     | chi2: 0.23364820697742145
[2025-07-27 06:30:14] 2025-07-27 10:29:39,950 | INFO     | current chi2=0.23364820697742145 (change=87.5562939998189 %)
[2025-07-27 06:30:14] 2025-07-27 10:29:39,951 | INFO     | sum of square deviations: 2443534873.0552764
[2025-07-27 06:30:14] 2025-07-27 10:29:39,952 | INFO     | sum of deviations: 255042367.48743796
[2025-07-27 06:30:14] 2025-07-27 10:29:39,952 | INFO     | mean x: 1753606072.316583
[2025-07-27 06:30:14] 2025-07-27 10:29:39,952 | INFO     | mean y: 2174250.246231156
[2025-07-27 06:30:14] 2025-07-27 10:29:39,952 | INFO     | -- intersect: -180857246.15502822
[2025-07-27 06:30:14] 2025-07-27 10:29:39,952 | INFO     | intersect: -180857246.15502822
[2025-07-27 06:30:14] 2025-07-27 10:29:39,952 | INFO     | chi2: 0.2212577968211231
[2025-07-27 06:30:14] 2025-07-27 10:29:39,952 | INFO     | current chi2=0.2212577968211231 (change=5.303019576561826 %)
[2025-07-27 06:30:14] 2025-07-27 10:29:39,953 | INFO     | left removable region: 20
[2025-07-27 06:30:14] 2025-07-27 10:29:39,953 | INFO     | sum of square deviations: 1900270577.9781349
[2025-07-27 06:30:14] 2025-07-27 10:29:39,954 | INFO     | sum of deviations: 13030335559.163925
[2025-07-27 06:30:14] 2025-07-27 10:29:39,954 | INFO     | mean x: 1753606194.3224044
[2025-07-27 06:30:14] 2025-07-27 10:29:39,954 | INFO     | mean y: 2169539.081967213
[2025-07-27 06:30:14] 2025-07-27 10:29:39,954 | INFO     | -- intersect: -12022474432.915726
[2025-07-27 06:30:14] 2025-07-27 10:29:39,954 | INFO     | intersect: -12022474432.915726
[2025-07-27 06:30:14] 2025-07-27 10:29:39,955 | INFO     | chi2: 0.05993975914759977
[2025-07-27 06:30:14] 2025-07-27 10:29:39,955 | INFO     | -- intersect: -12022474432.915726
[2025-07-27 06:30:14] 2025-07-27 10:29:39,955 | INFO     | current memory leak: 6.86 B/s (using 183 data points, chi2=0.06)
[2025-07-27 06:30:14] 2025-07-27 10:29:39,955 | INFO     | could have reported an average CPU frequency of 2459 MHz (11 samples)
[2025-07-27 06:30:14] 2025-07-27 10:29:39,956 | INFO     | ..............................
[2025-07-27 06:30:14] 2025-07-27 10:29:39,956 | INFO     | . Timing measurements:
[2025-07-27 06:30:14] 2025-07-27 10:29:39,956 | INFO     | . get job = 0 s
[2025-07-27 06:30:14] 2025-07-27 10:29:39,956 | INFO     | . initial setup = 5 s
[2025-07-27 06:30:14] 2025-07-27 10:29:39,956 | INFO     | . payload setup = 38 s
[2025-07-27 06:30:14] 2025-07-27 10:29:39,956 | INFO     | . stage-in = 0 s
[2025-07-27 06:30:14] 2025-07-27 10:29:39,956 | INFO     | . payload execution = 12761 s
[2025-07-27 06:30:14] 2025-07-27 10:29:39,956 | INFO     | . stage-out = 2 s
[2025-07-27 06:30:14] 2025-07-27 10:29:39,956 | INFO     | . log creation = 0 s
[2025-07-27 06:30:14] 2025-07-27 10:29:39,956 | INFO     | ..............................
[2025-07-27 06:30:14] 2025-07-27 10:29:40,064 | INFO     | 
[2025-07-27 06:30:14] 2025-07-27 10:29:40,065 | INFO     | job summary report
[2025-07-27 06:30:14] 2025-07-27 10:29:40,065 | INFO     | --------------------------------------------------
[2025-07-27 06:30:14] 2025-07-27 10:29:40,065 | INFO     | PanDA job id: 6745948381
[2025-07-27 06:30:14] 2025-07-27 10:29:40,065 | INFO     | task id: 45759912
[2025-07-27 06:30:14] 2025-07-27 10:29:40,065 | INFO     | errors: (none)
[2025-07-27 06:30:14] 2025-07-27 10:29:40,065 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 06:30:14] 2025-07-27 10:29:40,065 | INFO     | pilot state: finished 
[2025-07-27 06:30:14] 2025-07-27 10:29:40,065 | INFO     | transexitcode: 0
[2025-07-27 06:30:14] 2025-07-27 10:29:40,065 | INFO     | exeerrorcode: 0
[2025-07-27 06:30:14] 2025-07-27 10:29:40,065 | INFO     | exeerrordiag: 
[2025-07-27 06:30:14] 2025-07-27 10:29:40,065 | INFO     | exitcode: 0
[2025-07-27 06:30:14] 2025-07-27 10:29:40,066 | INFO     | exitmsg: OK
[2025-07-27 06:30:14] 2025-07-27 10:29:40,066 | INFO     | cpuconsumptiontime: 69335 s
[2025-07-27 06:30:14] 2025-07-27 10:29:40,066 | INFO     | nevents: 400
[2025-07-27 06:30:14] 2025-07-27 10:29:40,066 | INFO     | neventsw: 0
[2025-07-27 06:30:14] 2025-07-27 10:29:40,066 | INFO     | pid: 3425018
[2025-07-27 06:30:14] 2025-07-27 10:29:40,066 | INFO     | pgrp: 3425018
[2025-07-27 06:30:14] 2025-07-27 10:29:40,066 | INFO     | corecount: 8
[2025-07-27 06:30:14] 2025-07-27 10:29:40,066 | INFO     | event service: False
[2025-07-27 06:30:14] 2025-07-27 10:29:40,066 | INFO     | sizes: {0: 2397290, 1: 2397318, 2: 2397517, 13: 2397517, 24: 2397573, 26: 2397863, 35: 2398019, 12803: 2428023, 12806: 2437021, 12807: 2437077, 12818: 2437271}
[2025-07-27 06:30:14] 2025-07-27 10:29:40,066 | INFO     | --------------------------------------------------
[2025-07-27 06:30:14] 2025-07-27 10:29:40,066 | INFO     | 
[2025-07-27 06:30:14] 2025-07-27 10:29:40,067 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-27 06:30:14] 2025-07-27 10:29:40,100 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 06:30:14] 2025-07-27 10:29:40,100 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 06:30:14] 2025-07-27 10:29:40,100 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 06:30:14] 2025-07-27 10:29:40,101 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 06:30:14] 2025-07-27 10:29:40,101 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 06:30:14] 2025-07-27 10:29:40,101 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 06:30:14] 2025-07-27 10:29:40,101 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 06:30:14] 2025-07-27 10:29:40,101 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 06:30:14] 2025-07-27 10:29:40,101 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 06:30:14] 2025-07-27 10:29:40,101 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 06:30:14] 2025-07-27 10:29:40,101 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 06:30:14] 2025-07-27 10:29:40,101 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 06:30:14] 2025-07-27 10:29:40,101 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 06:30:14] 2025-07-27 10:29:40,101 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 06:30:14] 2025-07-27 10:29:40,101 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 06:30:14] 2025-07-27 10:29:40,101 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 06:30:14] 2025-07-27 10:29:40,101 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 06:30:14] 2025-07-27 10:29:40,102 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 06:30:14] 2025-07-27 10:29:40,102 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 06:30:14] 2025-07-27 10:29:40,102 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 06:30:14] 2025-07-27 10:29:40,102 | INFO     | job 6745948381 has completed (purged errors)
[2025-07-27 06:30:14] 2025-07-27 10:29:40,102 | INFO     | overall cleanup function is called
[2025-07-27 06:30:14] 2025-07-27 10:29:41,110 | INFO     | --- collectZombieJob: --- 10, [3425018]
[2025-07-27 06:30:14] 2025-07-27 10:29:41,110 | INFO     | zombie collector waiting for pid 3425018
[2025-07-27 06:30:14] 2025-07-27 10:29:41,112 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 06:30:14] 2025-07-27 10:29:41,112 | INFO     | collected zombie processes
[2025-07-27 06:30:14] 2025-07-27 10:29:41,112 | INFO     | will attempt to kill all subprocesses of pid=3425018
[2025-07-27 06:30:14] 2025-07-27 10:29:41,564 | INFO     | process IDs to be killed: [3425018] (in reverse order)
[2025-07-27 06:30:14] 2025-07-27 10:29:41,707 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 06:30:14] 2025-07-27 10:29:41,708 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 06:30:14] 2025-07-27 10:29:41,726 | INFO     | did not find any defunct processes belonging to 3425018
[2025-07-27 06:30:14] 2025-07-27 10:29:41,745 | INFO     | did not find any defunct processes belonging to 3425018
[2025-07-27 06:30:14] 2025-07-27 10:29:41,746 | INFO     | ready for new job
[2025-07-27 06:30:14] 2025-07-27 10:29:41,746 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 06:30:14] 2025-07-27 10:29:41,748 | INFO     | ***************************************
[2025-07-27 06:30:14] 2025-07-27 10:29:41,749 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 06:30:14] 2025-07-27 10:29:41,749 | INFO     | ***************************************
[2025-07-27 06:30:14] 2025-07-27 10:29:41,749 | INFO     | 
[2025-07-27 06:30:14] 2025-07-27 10:29:41,755 | INFO     | architecture information:
[2025-07-27 06:30:14] 2025-07-27 10:29:41,756 | INFO     | executing command: cat /etc/os-release
[2025-07-27 06:30:14] 2025-07-27 10:29:41,781 | INFO     | cat /etc/os-release:
[2025-07-27 06:30:14] NAME="CentOS Linux"
[2025-07-27 06:30:14] VERSION="7 (Core)"
[2025-07-27 06:30:14] ID="centos"
[2025-07-27 06:30:14] ID_LIKE="rhel fedora"
[2025-07-27 06:30:14] VERSION_ID="7"
[2025-07-27 06:30:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 06:30:14] ANSI_COLOR="0;31"
[2025-07-27 06:30:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 06:30:14] HOME_URL="https://www.centos.org/"
[2025-07-27 06:30:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 06:30:14] 
[2025-07-27 06:30:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 06:30:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 06:30:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 06:30:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 06:30:14] 
[2025-07-27 06:30:14] 2025-07-27 10:29:41,781 | INFO     | ***************************************
[2025-07-27 06:30:14] 2025-07-27 10:29:42,284 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-27 06:30:14] 2025-07-27 10:29:42,312 | INFO     | sufficient remaining disk space (95384764416 B)
[2025-07-27 06:30:14] 2025-07-27 10:29:42,313 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 06:30:14] 2025-07-27 10:29:42,313 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 06:30:14] 2025-07-27 10:29:42,313 | INFO     | update_server=False
[2025-07-27 06:30:14] 2025-07-27 10:29:42,313 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 06:30:14] 2025-07-27 10:29:42,487 | INFO     | all data control threads have been joined
[2025-07-27 06:30:14] 2025-07-27 10:29:42,581 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 06:30:14] 2025-07-27 10:29:42,582 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 06:30:14] 2025-07-27 10:29:42,582 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 06:30:14] 2025-07-27 10:29:42,582 | INFO     | will abort loop
[2025-07-27 06:30:14] 2025-07-27 10:29:43,108 | INFO     | all job control threads have been joined
[2025-07-27 06:30:14] 2025-07-27 10:29:43,183 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 06:30:14] 2025-07-27 10:29:43,318 | INFO     | [job] retrieve thread has finished
[2025-07-27 06:30:14] 2025-07-27 10:29:43,492 | INFO     | [data] control thread has finished
[2025-07-27 06:30:14] 2025-07-27 10:29:43,589 | INFO     | [job] job monitor thread has finished
[2025-07-27 06:30:14] 2025-07-27 10:29:43,614 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 06:30:14] 2025-07-27 10:29:43,682 | INFO     | [data] copytool_in thread has finished
[2025-07-27 06:30:14] 2025-07-27 10:29:43,715 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 06:30:14] 2025-07-27 10:29:43,747 | INFO     | [payload] failed_post thread has finished
[2025-07-27 06:30:14] 2025-07-27 10:29:43,811 | INFO     | all payload control threads have been joined
[2025-07-27 06:30:14] 2025-07-27 10:29:44,114 | INFO     | [job] control thread has finished
[2025-07-27 06:30:14] 2025-07-27 10:29:44,294 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 06:30:14] 2025-07-27 10:29:44,301 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 06:30:14] 2025-07-27 10:29:44,731 | INFO     | [job] validate thread has finished
[2025-07-27 06:30:14] 2025-07-27 10:29:44,817 | INFO     | [payload] control thread has finished
[2025-07-27 06:30:14] 2025-07-27 10:29:44,902 | INFO     | [payload] validate_post thread has finished
[2025-07-27 06:30:14] 2025-07-27 10:29:45,077 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 06:30:14] 2025-07-27 10:29:45,192 | INFO     | [data] copytool_out thread has finished
[2025-07-27 06:30:14] 2025-07-27 10:29:46,083 | INFO     | [job] queue monitor thread has finished
[2025-07-27 06:30:14] 2025-07-27 10:29:48,304 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 06:30:14] 2025-07-27 10:29:53,055 | INFO     | job.realtimelogging is not enabled
[2025-07-27 06:30:14] 2025-07-27 10:29:54,061 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 06:30:14] 2025-07-27 10:29:55,167 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140378620401472)>', '<ExcThread(monitor, started 140378338461440)>']
[2025-07-27 06:30:14] 2025-07-27 10:30:00,192 | INFO     | all workflow threads have been joined
[2025-07-27 06:30:14] 2025-07-27 10:30:00,192 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 06:30:14] 2025-07-27 10:30:00,192 | INFO     | traces error code: 0
[2025-07-27 06:30:14] 2025-07-27 10:30:00,192 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 06:30:14] 2025-07-27 10:30:13,509 | INFO     | PID=3411683 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 06:30:14] 2025-07-27 10:30:13,510 | INFO     | .. there are 18 such processes running
[2025-07-27 06:30:14] 2025-07-27 10:30:13,511 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 06:30:14] 2025-07-27 10:30:13,511 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 06:30:14] 2025-07-27 10:30:13,511 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 06:30:14] 2025-07-27 10:30:13,512 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 06:30:14] 2025-07-27 10:30:13,512 | INFO     | [monitor] control thread has ended
[2025-07-27 06:30:14] 2025-07-27 10:30:13,749 [wrapper] ==== pilot stdout END ====
[2025-07-27 06:30:14] 2025-07-27 10:30:13,752 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 06:30:14] 2025-07-27 10:30:13,755 [wrapper] pilotpid: 3411683
[2025-07-27 06:30:14] 2025-07-27 10:30:13,759 [wrapper] Pilot exit status: 0
[2025-07-27 06:30:14] 2025-07-27 10:30:13,790 [wrapper] pandaids: 6745948381
[2025-07-27 06:30:14] 2025-07-27 10:30:13,892 [wrapper] cleanup supervisor_pilot  159713 3411684
[2025-07-27 06:30:14] 2025-07-27 10:30:13,899 [wrapper] Test setup, not cleaning
[2025-07-27 06:30:14] 2025-07-27 10:30:13,905 [wrapper] apfmon messages muted
[2025-07-27 06:30:14] 2025-07-27 10:30:13,912 [wrapper] ==== wrapper stdout END ====
[2025-07-27 06:30:14] 2025-07-27 10:30:13,918 [wrapper] ==== wrapper stderr END ====
[2025-07-27 06:30:14]  *** Error codes and diagnostics ***
[2025-07-27 06:30:14]     "exeErrorCode": 0,
[2025-07-27 06:30:14]     "exeErrorDiag": "",
[2025-07-27 06:30:14]     "pilotErrorCode": 0,
[2025-07-27 06:30:14]     "pilotErrorDiag": "",
[2025-07-27 06:30:14]  *** Listing of results directory ***
[2025-07-27 06:30:14] total 403152
[2025-07-27 06:30:14] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 21:40 pilot3.tar.gz
[2025-07-27 06:30:14] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 21:48 queuedata.json
[2025-07-27 06:30:14] -rwx------. 1 boincer umatlas     36292 Jul 26 21:49 runpilot2-wrapper.sh
[2025-07-27 06:30:14] -rw-r--r--. 1 boincer umatlas       100 Jul 27 02:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 06:30:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 02:54 run_atlas
[2025-07-27 06:30:14] -rw-r--r--. 1 boincer umatlas       105 Jul 27 02:54 job.xml
[2025-07-27 06:30:14] -rw-r--r--. 2 boincer umatlas 233124590 Jul 27 02:54 EVNT.45759910._000004.pool.root.1
[2025-07-27 06:30:14] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 02:54 shared
[2025-07-27 06:30:14] -rw-r--r--. 2 boincer umatlas    542875 Jul 27 02:54 input.tar.gz
[2025-07-27 06:30:14] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 02:54 start_atlas.sh
[2025-07-27 06:30:14] -rw-r--r--. 1 boincer umatlas         0 Jul 27 02:54 boinc_lockfile
[2025-07-27 06:30:14] -rw-r--r--. 1 boincer umatlas      2554 Jul 27 02:54 pandaJob.out
[2025-07-27 06:30:14] -rw-------. 1 boincer umatlas    980125 Jul 27 02:55 agis_schedconf.cvmfs.json
[2025-07-27 06:30:14] drwx------. 4 boincer umatlas      4096 Jul 27 02:55 pilot3
[2025-07-27 06:30:14] -rw-------. 1 boincer umatlas 172886640 Jul 27 06:28 HITS.45759912._000081.pool.root.1
[2025-07-27 06:30:14] -rw-r--r--. 1 boincer umatlas       531 Jul 27 06:28 boinc_task_state.xml
[2025-07-27 06:30:14] -rw-------. 1 boincer umatlas      1042 Jul 27 06:29 memory_monitor_summary.json
[2025-07-27 06:30:14] -rw-------. 1 boincer umatlas   1593052 Jul 27 06:29 agis_ddmendpoints.agis.ALL.json
[2025-07-27 06:30:14] -rw-------. 1 boincer umatlas    373210 Jul 27 06:29 log.45759912._000081.job.log.tgz.1
[2025-07-27 06:30:14] -rw-------. 1 boincer umatlas      7821 Jul 27 06:29 heartbeat.json
[2025-07-27 06:30:14] -rw-r--r--. 1 boincer umatlas      6860 Jul 27 06:29 init_data.xml
[2025-07-27 06:30:14] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 06:29 boinc_mmap_file
[2025-07-27 06:30:14] -rw-r--r--. 1 boincer umatlas        28 Jul 27 06:29 wrapper_checkpoint.txt
[2025-07-27 06:30:14] -rw-------. 1 boincer umatlas        95 Jul 27 06:30 pilot_heartbeat.json
[2025-07-27 06:30:14] -rw-------. 1 boincer umatlas       823 Jul 27 06:30 pilotlog.txt
[2025-07-27 06:30:14] -rw-------. 1 boincer umatlas   1096749 Jul 27 06:30 log.45759912._000081.job.log.1
[2025-07-27 06:30:14] -rw-------. 1 boincer umatlas       357 Jul 27 06:30 output.list
[2025-07-27 06:30:14] -rw-r--r--. 1 boincer umatlas       620 Jul 27 06:30 runtime_log
[2025-07-27 06:30:14] -rw-------. 1 boincer umatlas   1484800 Jul 27 06:30 result.tar.gz
[2025-07-27 06:30:14] -rw-r--r--. 1 boincer umatlas      8671 Jul 27 06:30 runtime_log.err
[2025-07-27 06:30:14] -rw-------. 1 boincer umatlas       658 Jul 27 06:30 4kDNDmyg5z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxqTLDmmwLuYn.diag
[2025-07-27 06:30:14] -rw-r--r--. 1 boincer umatlas     21240 Jul 27 06:30 stderr.txt
[2025-07-27 06:30:14] HITS file was successfully produced:
[2025-07-27 06:30:14] -rw-------. 1 boincer umatlas 172886640 Jul 27 06:28 shared/HITS.pool.root.1
[2025-07-27 06:30:14]  *** Contents of shared directory: ***
[2025-07-27 06:30:14] total 398508
[2025-07-27 06:30:14] -rw-r--r--. 2 boincer umatlas 233124590 Jul 27 02:54 ATLAS.root_0
[2025-07-27 06:30:14] -rw-r--r--. 2 boincer umatlas    542875 Jul 27 02:54 input.tar.gz
[2025-07-27 06:30:14] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 02:54 start_atlas.sh
[2025-07-27 06:30:14] -rw-------. 1 boincer umatlas 172886640 Jul 27 06:28 HITS.pool.root.1
[2025-07-27 06:30:14] -rw-------. 1 boincer umatlas   1484800 Jul 27 06:30 result.tar.gz
06:30:15 (3406946): run_atlas exited; CPU time 69966.588242
06:30:15 (3406946): called boinc_finish(0)

</stderr_txt>
]]>

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