Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:53:12 (534779): wrapper (7.7.26015): starting
23:53:12 (534779): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 23:53:12] Arguments: --nthreads 8
[2025-07-26 23:53:12] Threads: 8
[2025-07-26 23:53:12] Checking for CVMFS
[2025-07-26 23:53:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 23:53:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 23:53:12] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 23:53:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 23:53:12] 2.11.3.0 3400840 43581 212944 148803 0 386 40943163 45568000 12046 130560 0 274965668 99.771 184505594 17248 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-26 23:53:12] CVMFS is ok
[2025-07-26 23:53:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 23:53:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 23:53:12] Further information can be found at the LHC@home message board.
[2025-07-26 23:53:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 23:53:12] Checking for apptainer binary...
[2025-07-26 23:53:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 23:53:12] Running /usr/bin/apptainer --version
[2025-07-26 23:53:12] apptainer version 1.3.3-1.el9
[2025-07-26 23:53:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 23:53:12] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0005.triumf.lcg
[2025-07-26 23:53:12] apptainer works
[2025-07-26 23:53:12] Set ATHENA_PROC_NUMBER=8
[2025-07-26 23:53:12] Set ATHENA_CORE_NUMBER=8
[2025-07-26 23:53:12] Starting ATLAS job with PandaID=6746016678
[2025-07-26 23:53:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 23:56:39]  *** The last 200 lines of the pilot log: ***
[2025-07-26 23:56:39] 2025-07-27 06:56:06,288 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 23:56:39] 2025-07-27 06:56:06,288 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 23:56:39] 2025-07-27 06:56:06,288 | WARNING  | found no stored workdir sizes
[2025-07-26 23:56:39] 2025-07-27 06:56:06,288 | INFO     | will not add max space = 0 B to job metrics
[2025-07-26 23:56:39] 2025-07-27 06:56:06,288 | WARNING  | wrong length of table data, x=[1753599227.0], y=[2028.0] (must be same and length>=4)
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | ..............................
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | . Timing measurements:
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | . get job = 0 s
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | . initial setup = 3 s
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | . payload setup = 4 s
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | . stage-in = 0 s
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | . payload execution = 17 s
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | . stage-out = 0 s
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | . log creation = 0 s
[2025-07-26 23:56:39] 2025-07-27 06:56:06,290 | INFO     | ..............................
[2025-07-26 23:56:39] 2025-07-27 06:56:06,290 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 23:56:39] 2025-07-27 06:56:06,290 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6746016678/pilotlog.txt
[2025-07-26 23:56:39] 2025-07-27 06:56:06,301 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-26 23:56:39] - Log from pilotlog.txt -
[2025-07-26 23:56:39] 2025-07-27 06:56:06,287 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 23:56:39] 2025-07-27 06:56:06,287 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 23:56:39] 2025-07-27 06:56:06,288 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 23:56:39] 2025-07-27 06:56:06,288 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 23:56:39] 2025-07-27 06:56:06,288 | WARNING  | found no stored workdir sizes
[2025-07-26 23:56:39] 2025-07-27 06:56:06,288 | INFO     | will not add max space = 0 B to job metrics
[2025-07-26 23:56:39] 2025-07-27 06:56:06,288 | WARNING  | wrong length of table data, x=[1753599227.0], y=[2028.0] (must be same and length>=4)
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | ..............................
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | . Timing measurements:
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | . get job = 0 s
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | . initial setup = 3 s
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | . payload setup = 4 s
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | . stage-in = 0 s
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | . payload execution = 17 s
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | . stage-out = 0 s
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | . log creation = 0 s
[2025-07-26 23:56:39] 2025-07-27 06:56:06,290 | INFO     | ..............................
[2025-07-26 23:56:39] 2025-07-27 06:56:06,290 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 23:56:39] 2025-07-27 06:56:06,290 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6746016678/pilotlog.txt
[2025-07-26 23:56:39] 2025-07-27 06:56:06,301 | WARNING  | 
[2025-07-26 23:56:39] [begin log extracts]
[2025-07-26 23:56:39] - Log from pilotlog.txt -
[2025-07-26 23:56:39] 2025-07-27 06:56:06,287 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 23:56:39] 2025-07-27 06:56:06,287 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 23:56:39] 2025-07-27 06:56:06,288 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 23:56:39] 2025-07-27 06:56:06,288 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 23:56:39] 2025-07-27 06:56:06,288 | WARNING  | found no stored workdir sizes
[2025-07-26 23:56:39] 2025-07-27 06:56:06,288 | INFO     | will not add max space = 0 B to job metrics
[2025-07-26 23:56:39] 2025-07-27 06:56:06,288 | WARNING  | wrong length of table data, x=[1753599227.0], y=[2028.0] (must be same and length>=4)
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | ..............................
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | . Timing measurements:
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | . get job = 0 s
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | . initial setup = 3 s
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | . payload setup = 4 s
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | . stage-in = 0 s
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | . payload execution = 17 s
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | . stage-out = 0 s
[2025-07-26 23:56:39] 2025-07-27 06:56:06,289 | INFO     | . log creation = 0 s
[2025-07-26 23:56:39] 2025-07-27 06:56:06,290 | INFO     | ..............................
[2025-07-26 23:56:39] 2025-07-27 06:56:06,290 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 23:56:39] 2025-07-27 06:56:06,290 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6746016678/pilotlog.txt
[2025-07-26 23:56:39] [end log extracts]
[2025-07-26 23:56:39] 2025-07-27 06:56:06,301 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-26 23:56:39] 2025-07-27 06:56:06,302 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-26 23:56:39] 2025-07-27 06:56:06,541 | INFO     | 
[2025-07-26 23:56:39] 2025-07-27 06:56:06,541 | INFO     | job summary report
[2025-07-26 23:56:39] 2025-07-27 06:56:06,541 | INFO     | --------------------------------------------------
[2025-07-26 23:56:39] 2025-07-27 06:56:06,541 | INFO     | PanDA job id: 6746016678
[2025-07-26 23:56:39] 2025-07-27 06:56:06,541 | INFO     | task id: 45759764
[2025-07-26 23:56:39] 2025-07-27 06:56:06,541 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-26 23:53:56,630 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-26 23:56:39] 2025-07-27 06:56:06,542 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 23:56:39] 2025-07-27 06:56:06,542 | INFO     | pilot state: failed 
[2025-07-26 23:56:39] 2025-07-27 06:56:06,542 | INFO     | transexitcode: 65
[2025-07-26 23:56:39] 2025-07-27 06:56:06,542 | INFO     | exeerrorcode: 65
[2025-07-26 23:56:39] 2025-07-27 06:56:06,542 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-26 23:56:39] 2025-07-27 06:56:06,542 | INFO     | exitcode: 65
[2025-07-26 23:56:39] 2025-07-27 06:56:06,542 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-26 23:56:39] 2025-07-27 06:56:06,542 | INFO     | cpuconsumptiontime: 16 s
[2025-07-26 23:56:39] 2025-07-27 06:56:06,542 | INFO     | nevents: 0
[2025-07-26 23:56:39] 2025-07-27 06:56:06,542 | INFO     | neventsw: 0
[2025-07-26 23:56:39] 2025-07-27 06:56:06,542 | INFO     | pid: 551289
[2025-07-26 23:56:39] 2025-07-27 06:56:06,542 | INFO     | pgrp: 551289
[2025-07-26 23:56:39] 2025-07-27 06:56:06,542 | INFO     | corecount: 8
[2025-07-26 23:56:39] 2025-07-27 06:56:06,542 | INFO     | event service: False
[2025-07-26 23:56:39] 2025-07-27 06:56:06,543 | INFO     | sizes: {0: 2397299, 1: 2397498, 5: 2397760, 11: 2397816, 25: 2421011, 26: 2425303, 27: 2425459, 147: 2425625}
[2025-07-26 23:56:39] 2025-07-27 06:56:06,543 | INFO     | --------------------------------------------------
[2025-07-26 23:56:39] 2025-07-27 06:56:06,543 | INFO     | 
[2025-07-26 23:56:39] 2025-07-27 06:56:06,543 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-26 23:56:39] 2025-07-27 06:56:06,557 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 23:56:39] 2025-07-27 06:56:06,558 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 23:56:39] 2025-07-27 06:56:06,558 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 23:56:39] 2025-07-27 06:56:06,558 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 23:56:39] 2025-07-27 06:56:06,558 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 23:56:39] 2025-07-27 06:56:06,558 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 23:56:39] 2025-07-27 06:56:06,558 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 23:56:39] 2025-07-27 06:56:06,558 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 23:56:39] 2025-07-27 06:56:06,558 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 23:56:39] 2025-07-27 06:56:06,558 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 23:56:39] 2025-07-27 06:56:06,558 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 23:56:39] 2025-07-27 06:56:06,559 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 23:56:39] 2025-07-27 06:56:06,559 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 23:56:39] 2025-07-27 06:56:06,559 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 23:56:39] 2025-07-27 06:56:06,559 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 23:56:39] 2025-07-27 06:56:06,559 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 23:56:39] 2025-07-27 06:56:06,559 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 23:56:39] 2025-07-27 06:56:06,559 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 23:56:39] 2025-07-27 06:56:06,559 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 23:56:39] 2025-07-27 06:56:06,559 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 23:56:39] 2025-07-27 06:56:06,559 | INFO     | job 6746016678 has completed (purged errors)
[2025-07-26 23:56:39] 2025-07-27 06:56:06,559 | INFO     | overall cleanup function is called
[2025-07-26 23:56:39] 2025-07-27 06:56:07,567 | INFO     | --- collectZombieJob: --- 10, [551289]
[2025-07-26 23:56:39] 2025-07-27 06:56:07,567 | INFO     | zombie collector waiting for pid 551289
[2025-07-26 23:56:39] 2025-07-27 06:56:07,568 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 23:56:39] 2025-07-27 06:56:07,568 | INFO     | collected zombie processes
[2025-07-26 23:56:39] 2025-07-27 06:56:07,568 | INFO     | will attempt to kill all subprocesses of pid=551289
[2025-07-26 23:56:39] 2025-07-27 06:56:07,754 | INFO     | process IDs to be killed: [551289] (in reverse order)
[2025-07-26 23:56:39] 2025-07-27 06:56:07,811 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 23:56:39] 2025-07-27 06:56:07,811 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 23:56:39] 2025-07-27 06:56:07,818 | INFO     | did not find any defunct processes belonging to 551289
[2025-07-26 23:56:39] 2025-07-27 06:56:07,825 | INFO     | did not find any defunct processes belonging to 551289
[2025-07-26 23:56:39] 2025-07-27 06:56:07,825 | INFO     | ready for new job
[2025-07-26 23:56:39] 2025-07-27 06:56:07,826 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 23:56:39] 2025-07-27 06:56:07,827 | INFO     | ***************************************
[2025-07-26 23:56:39] 2025-07-27 06:56:07,827 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 23:56:39] 2025-07-27 06:56:07,827 | INFO     | ***************************************
[2025-07-26 23:56:39] 2025-07-27 06:56:07,827 | INFO     | 
[2025-07-26 23:56:39] 2025-07-27 06:56:07,842 | INFO     | architecture information:
[2025-07-26 23:56:39] 2025-07-27 06:56:07,842 | INFO     | executing command: cat /etc/os-release
[2025-07-26 23:56:39] 2025-07-27 06:56:07,851 | INFO     | cat /etc/os-release:
[2025-07-26 23:56:39] NAME="CentOS Linux"
[2025-07-26 23:56:39] VERSION="7 (Core)"
[2025-07-26 23:56:39] ID="centos"
[2025-07-26 23:56:39] ID_LIKE="rhel fedora"
[2025-07-26 23:56:39] VERSION_ID="7"
[2025-07-26 23:56:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 23:56:39] ANSI_COLOR="0;31"
[2025-07-26 23:56:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 23:56:39] HOME_URL="https://www.centos.org/"
[2025-07-26 23:56:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 23:56:39] 
[2025-07-26 23:56:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 23:56:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 23:56:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 23:56:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 23:56:39] 
[2025-07-26 23:56:39] 2025-07-27 06:56:07,852 | INFO     | ***************************************
[2025-07-26 23:56:39] 2025-07-27 06:56:08,355 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-26 23:56:39] 2025-07-27 06:56:08,367 | INFO     | sufficient remaining disk space (1344779845632 B)
[2025-07-26 23:56:39] 2025-07-27 06:56:08,367 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 23:56:39] 2025-07-27 06:56:08,367 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 23:56:39] 2025-07-27 06:56:08,367 | INFO     | update_server=False
[2025-07-26 23:56:39] 2025-07-27 06:56:08,367 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 23:56:39] 2025-07-27 06:56:08,368 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:56:39] 2025-07-27 06:56:08,368 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:56:39] 2025-07-27 06:56:08,368 | INFO     | aborting loop
[2025-07-26 23:56:39] 2025-07-27 06:56:08,415 | INFO     | all job control threads have been joined
[2025-07-26 23:56:39] 2025-07-27 06:56:08,515 | INFO     | all payload control threads have been joined
[2025-07-26 23:56:39] 2025-07-27 06:56:08,713 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 23:56:39] 2025-07-27 06:56:08,941 | INFO     | all data control threads have been joined
[2025-07-26 23:56:39] 2025-07-27 06:56:09,372 | INFO     | [job] queue monitor thread has finished
[2025-07-26 23:56:39] 2025-07-27 06:56:09,373 | INFO     | [job] retrieve thread has finished
[2025-07-26 23:56:39] 2025-07-27 06:56:09,373 | INFO     | [job] job monitor thread has finished
[2025-07-26 23:56:39] 2025-07-27 06:56:09,421 | INFO     | [job] control thread has finished
[2025-07-26 23:56:39] 2025-07-27 06:56:09,520 | INFO     | [payload] control thread has finished
[2025-07-26 23:56:39] 2025-07-27 06:56:09,527 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 23:56:39] 2025-07-27 06:56:09,677 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 23:56:39] 2025-07-27 06:56:09,702 | INFO     | [payload] validate_post thread has finished
[2025-07-26 23:56:39] 2025-07-27 06:56:09,716 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 23:56:39] 2025-07-27 06:56:09,755 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 23:56:39] 2025-07-27 06:56:09,946 | INFO     | [data] control thread has finished
[2025-07-26 23:56:39] 2025-07-27 06:56:10,166 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 23:56:39] 2025-07-27 06:56:10,639 | INFO     | [payload] failed_post thread has finished
[2025-07-26 23:56:39] 2025-07-27 06:56:10,690 | INFO     | [data] copytool_in thread has finished
[2025-07-26 23:56:39] 2025-07-27 06:56:10,720 | INFO     | [data] copytool_out thread has finished
[2025-07-26 23:56:39] 2025-07-27 06:56:10,783 | INFO     | [job] validate thread has finished
[2025-07-26 23:56:39] 2025-07-27 06:56:13,723 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 23:56:39] 2025-07-27 06:56:15,468 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139713943512896)>', '<ExcThread(monitor, started 139713247692544)>']
[2025-07-26 23:56:39] 2025-07-27 06:56:20,492 | INFO     | all workflow threads have been joined
[2025-07-26 23:56:39] 2025-07-27 06:56:20,492 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 23:56:39] 2025-07-27 06:56:20,493 | INFO     | traces error code: 0
[2025-07-26 23:56:39] 2025-07-27 06:56:20,493 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 23:56:39] 2025-07-27 06:56:39,620 | INFO     | PID=541651 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 23:56:39] 2025-07-27 06:56:39,620 | INFO     | .. there are 18 such processes running
[2025-07-26 23:56:39] 2025-07-27 06:56:39,621 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 23:56:39] 2025-07-27 06:56:39,621 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 23:56:39] 2025-07-27 06:56:39,621 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 23:56:39] 2025-07-27 06:56:39,621 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 23:56:39] 2025-07-27 06:56:39,621 | INFO     | [monitor] control thread has ended
[2025-07-26 23:56:39] 2025-07-27 06:56:39,883 [wrapper] ==== pilot stdout END ====
[2025-07-26 23:56:39] 2025-07-27 06:56:39,885 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 23:56:39] 2025-07-27 06:56:39,887 [wrapper] pilotpid: 541651
[2025-07-26 23:56:39] 2025-07-27 06:56:39,888 [wrapper] Pilot exit status: 0
[2025-07-26 23:56:39] 2025-07-27 06:56:39,896 [wrapper] pandaids: 6746016678
[2025-07-26 23:56:39] 2025-07-27 06:56:39,931 [wrapper] cleanup supervisor_pilot  541663 541652
[2025-07-26 23:56:39] 2025-07-27 06:56:39,933 [wrapper] Test setup, not cleaning
[2025-07-26 23:56:39] 2025-07-27 06:56:39,934 [wrapper] apfmon messages muted
[2025-07-26 23:56:39] 2025-07-27 06:56:39,936 [wrapper] ==== wrapper stdout END ====
[2025-07-26 23:56:39] 2025-07-27 06:56:39,938 [wrapper] ==== wrapper stderr END ====
[2025-07-26 23:56:39]  *** Error codes and diagnostics ***
[2025-07-26 23:56:39]     "exeErrorCode": 65,
[2025-07-26 23:56:39]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-26 23:56:39]     "pilotErrorCode": 1305,
[2025-07-26 23:56:39]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-26 23:56:39]  *** Listing of results directory ***
[2025-07-26 23:56:40] total 238964
[2025-07-26 23:56:40] -rw-r--r--. 1 boinc boinc    530466 Jul 26 21:20 pilot3.tar.gz
[2025-07-26 23:56:40] -rwx------. 1 boinc boinc     36292 Jul 26 21:37 runpilot2-wrapper.sh
[2025-07-26 23:56:40] -rw-r--r--. 1 boinc boinc      5112 Jul 26 21:37 queuedata.json
[2025-07-26 23:56:40] -rw-r--r--. 1 boinc boinc       100 Jul 26 23:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 23:56:40] -rwxr-xr-x. 1 boinc boinc      7986 Jul 26 23:53 run_atlas
[2025-07-26 23:56:40] -rw-r--r--. 1 boinc boinc       105 Jul 26 23:53 job.xml
[2025-07-26 23:56:40] -rw-r--r--. 2 boinc boinc 240635747 Jul 26 23:53 EVNT.45759762._000003.pool.root.1
[2025-07-26 23:56:40] -rw-r--r--. 1 boinc boinc      6446 Jul 26 23:53 init_data.xml
[2025-07-26 23:56:40] -rw-r--r--. 2 boinc boinc     15095 Jul 26 23:53 start_atlas.sh
[2025-07-26 23:56:40] drwxrwx--x. 2 boinc boinc      4096 Jul 26 23:53 shared
[2025-07-26 23:56:40] -rw-r--r--. 2 boinc boinc    542882 Jul 26 23:53 input.tar.gz
[2025-07-26 23:56:40] -rw-r--r--. 1 boinc boinc         0 Jul 26 23:53 boinc_lockfile
[2025-07-26 23:56:40] -rw-r--r--. 1 boinc boinc      2566 Jul 26 23:53 pandaJob.out
[2025-07-26 23:56:40] -rw-------. 1 boinc boinc    980125 Jul 26 23:53 agis_schedconf.cvmfs.json
[2025-07-26 23:56:40] -rw-------. 1 boinc boinc   1593052 Jul 26 23:53 agis_ddmendpoints.agis.ALL.json
[2025-07-26 23:56:40] drwx------. 4 boinc boinc      4096 Jul 26 23:53 pilot3
[2025-07-26 23:56:40] -rw-r--r--. 1 boinc boinc       522 Jul 26 23:54 boinc_task_state.xml
[2025-07-26 23:56:40] -rw-------. 1 boinc boinc       964 Jul 26 23:54 memory_monitor_summary.json
[2025-07-26 23:56:40] -rw-------. 1 boinc boinc     20815 Jul 26 23:54 log.45759764._000057.job.log.tgz.1
[2025-07-26 23:56:40] -rw-------. 1 boinc boinc      8367 Jul 26 23:56 heartbeat.json
[2025-07-26 23:56:40] -rw-r--r--. 1 boinc boinc      8192 Jul 26 23:56 boinc_mmap_file
[2025-07-26 23:56:40] -rw-r--r--. 1 boinc boinc        22 Jul 26 23:56 wrapper_checkpoint.txt
[2025-07-26 23:56:40] -rw-------. 1 boinc boinc        95 Jul 26 23:56 pilot_heartbeat.json
[2025-07-26 23:56:40] -rw-------. 1 boinc boinc       822 Jul 26 23:56 pilotlog.txt
[2025-07-26 23:56:40] -rw-------. 1 boinc boinc     74485 Jul 26 23:56 log.45759764._000057.job.log.1
[2025-07-26 23:56:40] -rw-------. 1 boinc boinc       188 Jul 26 23:56 output.list
[2025-07-26 23:56:40] -rw-r--r--. 1 boinc boinc       620 Jul 26 23:56 runtime_log
[2025-07-26 23:56:40] -rw-------. 1 boinc boinc    112640 Jul 26 23:56 result.tar.gz
[2025-07-26 23:56:40] -rw-r--r--. 1 boinc boinc      8648 Jul 26 23:56 runtime_log.err
[2025-07-26 23:56:40] -rw-------. 1 boinc boinc       645 Jul 26 23:56 dadMDmrJ8z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmxw1KDmdpjpTn.diag
[2025-07-26 23:56:40] -rw-r--r--. 1 boinc boinc     21803 Jul 26 23:56 stderr.txt
[2025-07-26 23:56:40] No HITS result produced
[2025-07-26 23:56:40]  *** Contents of shared directory: ***
[2025-07-26 23:56:40] total 235656
[2025-07-26 23:56:40] -rw-r--r--. 2 boinc boinc 240635747 Jul 26 23:53 ATLAS.root_0
[2025-07-26 23:56:40] -rw-r--r--. 2 boinc boinc     15095 Jul 26 23:53 start_atlas.sh
[2025-07-26 23:56:40] -rw-r--r--. 2 boinc boinc    542882 Jul 26 23:53 input.tar.gz
[2025-07-26 23:56:40] -rw-------. 1 boinc boinc    112640 Jul 26 23:56 result.tar.gz
23:56:41 (534779): run_atlas exited; CPU time 21.577956
23:56:41 (534779): called boinc_finish(0)

</stderr_txt>
]]>

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