Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:13:43 (2636616): wrapper (7.7.26015): starting
07:13:43 (2636616): wrapper: running run_atlas (--nthreads 12)
[2025-07-29 07:13:43] Arguments: --nthreads 12
[2025-07-29 07:13:43] Threads: 12
[2025-07-29 07:13:43] Checking for CVMFS
[2025-07-29 07:13:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-29 07:13:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-29 07:13:45] Running cvmfs_config stat atlas.cern.ch
[2025-07-29 07:13:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-29 07:13:47] 2.13.1.0 48702 9916 62452 148878 0 59 3341362 4096000 912 130560 0 6371456 99.908 732934 536 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-29 07:13:47] CVMFS is ok
[2025-07-29 07:13:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-29 07:13:47] Checking for apptainer binary...
[2025-07-29 07:13:47] apptainer is not installed, using version from CVMFS
[2025-07-29 07:13:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-29 07:13:48] g6400
[2025-07-29 07:13:48] apptainer works
[2025-07-29 07:13:48] Set ATHENA_PROC_NUMBER=12
[2025-07-29 07:13:48] Set ATHENA_CORE_NUMBER=12
[2025-07-29 07:13:49] Starting ATLAS job with PandaID=6745991232
[2025-07-29 07:13:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-29 13:30:18]  *** The last 200 lines of the pilot log: ***
[2025-07-29 13:30:18] 2025-07-29 13:29:45,161 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-29 13:30:18] 2025-07-29 13:29:45,169 | INFO     | fitting pss+swap vs Time
[2025-07-29 13:30:18] 2025-07-29 13:29:45,169 | INFO     | sum of square deviations: 15078528724.60279
[2025-07-29 13:30:18] 2025-07-29 13:29:45,171 | INFO     | sum of deviations: -102931123297.9178
[2025-07-29 13:30:18] 2025-07-29 13:29:45,171 | INFO     | mean x: 1753784625.7260275
[2025-07-29 13:30:18] 2025-07-29 13:29:45,171 | INFO     | mean y: 2700968.9808219178
[2025-07-29 13:30:18] 2025-07-29 13:29:45,171 | INFO     | -- intersect: 11974626403.194809
[2025-07-29 13:30:18] 2025-07-29 13:29:45,171 | INFO     | intersect: 11974626403.194809
[2025-07-29 13:30:18] 2025-07-29 13:29:45,172 | INFO     | chi2: 4.092230470957109
[2025-07-29 13:30:18] 2025-07-29 13:29:45,172 | INFO     | sum of square deviations: 14467398086.930662
[2025-07-29 13:30:18] 2025-07-29 13:29:45,178 | INFO     | sum of deviations: -46794535305.48615
[2025-07-29 13:30:18] 2025-07-29 13:29:45,178 | INFO     | mean x: 1753784473.2361112
[2025-07-29 13:30:18] 2025-07-29 13:29:45,178 | INFO     | mean y: 2714860.452777778
[2025-07-29 13:30:18] 2025-07-29 13:29:45,178 | INFO     | -- intersect: 5675298759.640397
[2025-07-29 13:30:18] 2025-07-29 13:29:45,178 | INFO     | intersect: 5675298759.640397
[2025-07-29 13:30:18] 2025-07-29 13:29:45,179 | INFO     | chi2: 2.3913689955474444
[2025-07-29 13:30:18] 2025-07-29 13:29:45,179 | INFO     | current chi2=2.3913689955474444 (change=41.563188766635115 %)
[2025-07-29 13:30:18] 2025-07-29 13:29:45,179 | INFO     | sum of square deviations: 13872946436.636572
[2025-07-29 13:30:18] 2025-07-29 13:29:45,185 | INFO     | sum of deviations: -45671963875.084526
[2025-07-29 13:30:18] 2025-07-29 13:29:45,185 | INFO     | mean x: 1753784320.7380283
[2025-07-29 13:30:18] 2025-07-29 13:29:45,185 | INFO     | mean y: 2715148.4507042253
[2025-07-29 13:30:18] 2025-07-29 13:29:45,185 | INFO     | -- intersect: 5776454311.020155
[2025-07-29 13:30:18] 2025-07-29 13:29:45,185 | INFO     | intersect: 5776454311.020155
[2025-07-29 13:30:18] 2025-07-29 13:29:45,186 | INFO     | chi2: 2.390557385604361
[2025-07-29 13:30:18] 2025-07-29 13:29:45,186 | INFO     | current chi2=2.390557385604361 (change=0.03393913463770869 %)
[2025-07-29 13:30:18] 2025-07-29 13:29:45,186 | INFO     | right removable region: 354
[2025-07-29 13:30:18] 2025-07-29 13:29:45,186 | INFO     | sum of square deviations: 14467236436.930662
[2025-07-29 13:30:18] 2025-07-29 13:29:45,188 | INFO     | sum of deviations: -176690360196.12503
[2025-07-29 13:30:18] 2025-07-29 13:29:45,188 | INFO     | mean x: 1753784778.2361112
[2025-07-29 13:30:18] 2025-07-29 13:29:45,188 | INFO     | mean y: 2719291.425
[2025-07-29 13:30:18] 2025-07-29 13:29:45,188 | INFO     | -- intersect: 21421935430.175167
[2025-07-29 13:30:18] 2025-07-29 13:29:45,188 | INFO     | intersect: 21421935430.175167
[2025-07-29 13:30:18] 2025-07-29 13:29:45,193 | INFO     | chi2: 2.373571972203261
[2025-07-29 13:30:18] 2025-07-29 13:29:45,193 | INFO     | current chi2=2.373571972203261 (change=41.99808664129028 %)
[2025-07-29 13:30:18] 2025-07-29 13:29:45,193 | INFO     | sum of square deviations: 13872688649.183132
[2025-07-29 13:30:18] 2025-07-29 13:29:45,195 | INFO     | sum of deviations: -192178042669.08447
[2025-07-29 13:30:18] 2025-07-29 13:29:45,195 | INFO     | mean x: 1753784930.7464788
[2025-07-29 13:30:18] 2025-07-29 13:29:45,195 | INFO     | mean y: 2723251.9323943662
[2025-07-29 13:30:18] 2025-07-29 13:29:45,195 | INFO     | -- intersect: 24297866304.33847
[2025-07-29 13:30:18] 2025-07-29 13:29:45,195 | INFO     | intersect: 24297866304.33847
[2025-07-29 13:30:18] 2025-07-29 13:29:45,195 | INFO     | chi2: 2.2647843416133773
[2025-07-29 13:30:18] 2025-07-29 13:29:45,196 | INFO     | current chi2=2.2647843416133773 (change=4.583287629947114 %)
[2025-07-29 13:30:18] 2025-07-29 13:29:45,196 | INFO     | left removable region: 20
[2025-07-29 13:30:18] 2025-07-29 13:29:45,196 | INFO     | sum of square deviations: 11553629469.856298
[2025-07-29 13:30:18] 2025-07-29 13:29:45,202 | INFO     | sum of deviations: -114949994338.56885
[2025-07-29 13:30:18] 2025-07-29 13:29:45,202 | INFO     | mean x: 1753784900.257485
[2025-07-29 13:30:18] 2025-07-29 13:29:45,202 | INFO     | mean y: 2733232.7275449103
[2025-07-29 13:30:18] 2025-07-29 13:29:45,202 | INFO     | -- intersect: 17451584685.13377
[2025-07-29 13:30:18] 2025-07-29 13:29:45,202 | INFO     | intersect: 17451584685.13377
[2025-07-29 13:30:18] 2025-07-29 13:29:45,202 | INFO     | chi2: 0.47477744119229914
[2025-07-29 13:30:18] 2025-07-29 13:29:45,202 | INFO     | -- intersect: 17451584685.13377
[2025-07-29 13:30:18] 2025-07-29 13:29:45,202 | INFO     | current memory leak: -9.95 B/s (using 334 data points, chi2=0.47)
[2025-07-29 13:30:18] 2025-07-29 13:29:45,203 | INFO     | could have reported an average CPU frequency of 3999 MHz (16 samples)
[2025-07-29 13:30:18] 2025-07-29 13:29:45,203 | INFO     | ..............................
[2025-07-29 13:30:18] 2025-07-29 13:29:45,203 | INFO     | . Timing measurements:
[2025-07-29 13:30:18] 2025-07-29 13:29:45,203 | INFO     | . get job = 0 s
[2025-07-29 13:30:18] 2025-07-29 13:29:45,203 | INFO     | . initial setup = 2 s
[2025-07-29 13:30:18] 2025-07-29 13:29:45,203 | INFO     | . payload setup = 72 s
[2025-07-29 13:30:18] 2025-07-29 13:29:45,203 | INFO     | . stage-in = 0 s
[2025-07-29 13:30:18] 2025-07-29 13:29:45,203 | INFO     | . payload execution = 22239 s
[2025-07-29 13:30:18] 2025-07-29 13:29:45,203 | INFO     | . stage-out = 1 s
[2025-07-29 13:30:18] 2025-07-29 13:29:45,203 | INFO     | . log creation = 0 s
[2025-07-29 13:30:18] 2025-07-29 13:29:45,203 | INFO     | ..............................
[2025-07-29 13:30:18] 2025-07-29 13:29:45,381 | INFO     | 
[2025-07-29 13:30:18] 2025-07-29 13:29:45,381 | INFO     | job summary report
[2025-07-29 13:30:18] 2025-07-29 13:29:45,381 | INFO     | --------------------------------------------------
[2025-07-29 13:30:18] 2025-07-29 13:29:45,381 | INFO     | PanDA job id: 6745991232
[2025-07-29 13:30:18] 2025-07-29 13:29:45,381 | INFO     | task id: 45743349
[2025-07-29 13:30:18] 2025-07-29 13:29:45,381 | INFO     | errors: (none)
[2025-07-29 13:30:18] 2025-07-29 13:29:45,381 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-29 13:30:18] 2025-07-29 13:29:45,381 | INFO     | pilot state: finished 
[2025-07-29 13:30:18] 2025-07-29 13:29:45,381 | INFO     | transexitcode: 0
[2025-07-29 13:30:18] 2025-07-29 13:29:45,381 | INFO     | exeerrorcode: 0
[2025-07-29 13:30:18] 2025-07-29 13:29:45,381 | INFO     | exeerrordiag: 
[2025-07-29 13:30:18] 2025-07-29 13:29:45,381 | INFO     | exitcode: 0
[2025-07-29 13:30:18] 2025-07-29 13:29:45,381 | INFO     | exitmsg: OK
[2025-07-29 13:30:18] 2025-07-29 13:29:45,381 | INFO     | cpuconsumptiontime: 35073 s
[2025-07-29 13:30:18] 2025-07-29 13:29:45,381 | INFO     | nevents: 400
[2025-07-29 13:30:18] 2025-07-29 13:29:45,381 | INFO     | neventsw: 0
[2025-07-29 13:30:18] 2025-07-29 13:29:45,381 | INFO     | pid: 2647057
[2025-07-29 13:30:18] 2025-07-29 13:29:45,381 | INFO     | pgrp: 2647057
[2025-07-29 13:30:18] 2025-07-29 13:29:45,382 | INFO     | corecount: 12
[2025-07-29 13:30:18] 2025-07-29 13:29:45,382 | INFO     | event service: False
[2025-07-29 13:30:18] 2025-07-29 13:29:45,382 | INFO     | sizes: {0: 2391705, 1: 2391904, 12: 2391904, 23: 2391932, 33: 2391960, 44: 2392016, 55: 2392462, 22315: 2427083, 22317: 2436127, 22318: 2436183, 22370: 2436207}
[2025-07-29 13:30:18] 2025-07-29 13:29:45,382 | INFO     | --------------------------------------------------
[2025-07-29 13:30:18] 2025-07-29 13:29:45,382 | INFO     | 
[2025-07-29 13:30:18] 2025-07-29 13:29:45,382 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-07-29 13:30:18] 2025-07-29 13:29:45,450 | INFO     | PID=2640215 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-29 13:30:18] 2025-07-29 13:29:45,450 | INFO     | .. there are 2 such processes running
[2025-07-29 13:30:18] 2025-07-29 13:29:45,451 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-29 13:30:18] 2025-07-29 13:29:45,451 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-29 13:30:18] 2025-07-29 13:29:45,451 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-29 13:30:18] 2025-07-29 13:29:45,451 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-29 13:30:18] 2025-07-29 13:29:45,451 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-29 13:30:18] 2025-07-29 13:29:45,451 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-29 13:30:18] 2025-07-29 13:29:45,451 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-29 13:30:18] 2025-07-29 13:29:45,451 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-29 13:30:18] 2025-07-29 13:29:45,451 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-29 13:30:18] 2025-07-29 13:29:45,451 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-29 13:30:18] 2025-07-29 13:29:45,451 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-29 13:30:18] 2025-07-29 13:29:45,451 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-29 13:30:18] 2025-07-29 13:29:45,451 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-29 13:30:18] 2025-07-29 13:29:45,451 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-29 13:30:18] 2025-07-29 13:29:45,451 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-29 13:30:18] 2025-07-29 13:29:45,451 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-29 13:30:18] 2025-07-29 13:29:45,451 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-29 13:30:18] 2025-07-29 13:29:45,452 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-29 13:30:18] 2025-07-29 13:29:45,452 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-29 13:30:18] 2025-07-29 13:29:45,452 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-29 13:30:18] 2025-07-29 13:29:45,452 | INFO     | job 6745991232 has completed (purged errors)
[2025-07-29 13:30:18] 2025-07-29 13:29:45,452 | INFO     | overall cleanup function is called
[2025-07-29 13:30:18] 2025-07-29 13:29:46,461 | INFO     | --- collectZombieJob: --- 10, [2647057]
[2025-07-29 13:30:18] 2025-07-29 13:29:46,461 | INFO     | zombie collector waiting for pid 2647057
[2025-07-29 13:30:18] 2025-07-29 13:29:46,461 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-29 13:30:18] 2025-07-29 13:29:46,461 | INFO     | collected zombie processes
[2025-07-29 13:30:18] 2025-07-29 13:29:46,461 | INFO     | will attempt to kill all subprocesses of pid=2647057
[2025-07-29 13:30:18] 2025-07-29 13:29:46,505 | INFO     | process IDs to be killed: [2647057] (in reverse order)
[2025-07-29 13:30:18] 2025-07-29 13:29:46,525 | WARNING  | found no corresponding commands to process id(s)
[2025-07-29 13:30:18] 2025-07-29 13:29:46,525 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-29 13:30:18] 2025-07-29 13:29:46,526 | INFO     | did not find any defunct processes belonging to 2647057
[2025-07-29 13:30:18] 2025-07-29 13:29:46,527 | INFO     | did not find any defunct processes belonging to 2647057
[2025-07-29 13:30:18] 2025-07-29 13:29:46,527 | INFO     | ready for new job
[2025-07-29 13:30:18] 2025-07-29 13:29:46,527 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-29 13:30:18] 2025-07-29 13:29:46,553 | INFO     | ***************************************
[2025-07-29 13:30:18] 2025-07-29 13:29:46,553 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-29 13:30:18] 2025-07-29 13:29:46,553 | INFO     | ***************************************
[2025-07-29 13:30:18] 2025-07-29 13:29:46,553 | INFO     | 
[2025-07-29 13:30:18] 2025-07-29 13:29:46,573 | INFO     | architecture information:
[2025-07-29 13:30:18] 2025-07-29 13:29:46,577 | INFO     | executing command: cat /etc/os-release
[2025-07-29 13:30:18] 2025-07-29 13:29:46,677 | INFO     | cat /etc/os-release:
[2025-07-29 13:30:18] NAME="CentOS Linux"
[2025-07-29 13:30:18] VERSION="7 (Core)"
[2025-07-29 13:30:18] ID="centos"
[2025-07-29 13:30:18] ID_LIKE="rhel fedora"
[2025-07-29 13:30:18] VERSION_ID="7"
[2025-07-29 13:30:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-29 13:30:18] ANSI_COLOR="0;31"
[2025-07-29 13:30:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-29 13:30:18] HOME_URL="https://www.centos.org/"
[2025-07-29 13:30:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-29 13:30:18] 
[2025-07-29 13:30:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-29 13:30:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-29 13:30:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-29 13:30:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-29 13:30:18] 
[2025-07-29 13:30:18] 2025-07-29 13:29:46,677 | INFO     | ***************************************
[2025-07-29 13:30:18] 2025-07-29 13:29:47,181 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-07-29 13:30:18] 2025-07-29 13:29:47,225 | INFO     | sufficient remaining disk space (200707932160 B)
[2025-07-29 13:30:18] 2025-07-29 13:29:47,225 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-29 13:30:18] 2025-07-29 13:29:47,225 | INFO     | current server update state: UPDATING_FINAL
[2025-07-29 13:30:18] 2025-07-29 13:29:47,225 | INFO     | update_server=False
[2025-07-29 13:30:18] 2025-07-29 13:29:47,225 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-29 13:30:18] 2025-07-29 13:29:47,225 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-29 13:30:18] 2025-07-29 13:29:47,225 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-29 13:30:18] 2025-07-29 13:29:47,225 | INFO     | aborting loop
[2025-07-29 13:30:18] 2025-07-29 13:29:48,009 | INFO     | all job control threads have been joined
[2025-07-29 13:30:18] 2025-07-29 13:29:48,049 | INFO     | all payload control threads have been joined
[2025-07-29 13:30:18] 2025-07-29 13:29:48,233 | INFO     | [job] retrieve thread has finished
[2025-07-29 13:30:18] 2025-07-29 13:29:48,233 | INFO     | [job] queue monitor thread has finished
[2025-07-29 13:30:18] 2025-07-29 13:29:48,233 | INFO     | [job] job monitor thread has finished
[2025-07-29 13:30:18] 2025-07-29 13:29:48,305 | INFO     | all data control threads have been joined
[2025-07-29 13:30:18] 2025-07-29 13:29:48,393 | INFO     | [payload] validate_post thread has finished
[2025-07-29 13:30:18] 2025-07-29 13:29:48,449 | INFO     | [payload] failed_post thread has finished
[2025-07-29 13:30:18] 2025-07-29 13:29:48,689 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-29 13:30:18] 2025-07-29 13:29:48,857 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-29 13:30:18] 2025-07-29 13:29:48,901 | INFO     | [payload] validate_pre thread has finished
[2025-07-29 13:30:18] 2025-07-29 13:29:48,901 | INFO     | [job] create_data_payload thread has finished
[2025-07-29 13:30:18] 2025-07-29 13:29:49,017 | INFO     | [job] control thread has finished
[2025-07-29 13:30:18] 2025-07-29 13:29:49,037 | INFO     | [payload] execute_payloads thread has finished
[2025-07-29 13:30:18] 2025-07-29 13:29:49,037 | INFO     | [data] copytool_in thread has finished
[2025-07-29 13:30:18] 2025-07-29 13:29:49,057 | INFO     | [payload] control thread has finished
[2025-07-29 13:30:18] 2025-07-29 13:29:49,061 | INFO     | [job] validate thread has finished
[2025-07-29 13:30:18] 2025-07-29 13:29:49,313 | INFO     | [data] control thread has finished
[2025-07-29 13:30:18] 2025-07-29 13:29:50,701 | INFO     | [data] copytool_out thread has finished
[2025-07-29 13:30:18] 2025-07-29 13:29:52,877 | INFO     | [data] queue_monitor thread has finished
[2025-07-29 13:30:18] 2025-07-29 13:29:57,997 | INFO     | job.realtimelogging is not enabled
[2025-07-29 13:30:18] 2025-07-29 13:29:59,001 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-29 13:30:18] 2025-07-29 13:30:00,669 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139726854514496)>', '<ExcThread(monitor, started 139726392637184)>']
[2025-07-29 13:30:18] 2025-07-29 13:30:05,693 | INFO     | all workflow threads have been joined
[2025-07-29 13:30:18] 2025-07-29 13:30:05,693 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-29 13:30:18] 2025-07-29 13:30:05,693 | INFO     | traces error code: 0
[2025-07-29 13:30:18] 2025-07-29 13:30:05,693 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-29 13:30:18] 2025-07-29 13:30:17,531 | INFO     | PID=2640215 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-29 13:30:18] 2025-07-29 13:30:17,531 | INFO     | .. there are 2 such processes running
[2025-07-29 13:30:18] 2025-07-29 13:30:17,531 | INFO     | found 0 job(s) in 20 queues
[2025-07-29 13:30:18] 2025-07-29 13:30:17,531 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-29 13:30:18] 2025-07-29 13:30:17,531 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-29 13:30:18] 2025-07-29 13:30:17,531 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-29 13:30:18] 2025-07-29 13:30:17,531 | INFO     | [monitor] control thread has ended
[2025-07-29 13:30:18] 2025-07-29 13:30:17,659 [wrapper] ==== pilot stdout END ====
[2025-07-29 13:30:18] 2025-07-29 13:30:17,697 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-29 13:30:18] 2025-07-29 13:30:17,737 [wrapper] pilotpid: 2640215
[2025-07-29 13:30:18] 2025-07-29 13:30:17,773 [wrapper] Pilot exit status: 0
[2025-07-29 13:30:18] 2025-07-29 13:30:17,865 [wrapper] pandaids: 6745991232
[2025-07-29 13:30:18] 2025-07-29 13:30:17,957 [wrapper] cleanup supervisor_pilot 2733777 2640216
[2025-07-29 13:30:18] 2025-07-29 13:30:17,981 [wrapper] Test setup, not cleaning
[2025-07-29 13:30:18] 2025-07-29 13:30:18,021 [wrapper] apfmon messages muted
[2025-07-29 13:30:18] 2025-07-29 13:30:18,057 [wrapper] ==== wrapper stdout END ====
[2025-07-29 13:30:18] 2025-07-29 13:30:18,097 [wrapper] ==== wrapper stderr END ====
[2025-07-29 13:30:18]  *** Error codes and diagnostics ***
[2025-07-29 13:30:18]     "exeErrorCode": 0,
[2025-07-29 13:30:18]     "exeErrorDiag": "",
[2025-07-29 13:30:18]     "pilotErrorCode": 0,
[2025-07-29 13:30:18]     "pilotErrorDiag": "",
[2025-07-29 13:30:18]  *** Listing of results directory ***
[2025-07-29 13:30:18] total 362388
[2025-07-29 13:30:18] -rw-r--r-- 1 boinc boinc    530466 Jul 27 03:36 pilot3.tar.gz
[2025-07-29 13:30:18] -rwx------ 1 boinc boinc     36292 Jul 27 04:16 runpilot2-wrapper.sh
[2025-07-29 13:30:18] -rw-r--r-- 1 boinc boinc      5112 Jul 27 04:16 queuedata.json
[2025-07-29 13:30:18] -rw-rw-r-- 1 boinc boinc       100 Jul 29 07:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-29 13:30:18] -rwxr-xr-x 1 boinc boinc      7986 Jul 29 07:13 run_atlas
[2025-07-29 13:30:18] -rw-rw-r-- 1 boinc boinc       105 Jul 29 07:13 job.xml
[2025-07-29 13:30:18] -rw-rw-r-- 1 boinc boinc      9442 Jul 29 07:13 init_data.xml
[2025-07-29 13:30:18] -rw-r--r-- 2 boinc boinc 148090710 Jul 29 07:13 EVNT.45743347._000376.pool.root.1
[2025-07-29 13:30:18] -rw-r--r-- 2 boinc boinc     15095 Jul 29 07:13 start_atlas.sh
[2025-07-29 13:30:18] drwxrwx--x 2 boinc boinc      4096 Jul 29 07:13 shared
[2025-07-29 13:30:18] -rw-r--r-- 2 boinc boinc    542883 Jul 29 07:13 input.tar.gz
[2025-07-29 13:30:18] -rw-rw-r-- 1 boinc boinc         0 Jul 29 07:13 boinc_lockfile
[2025-07-29 13:30:18] -rw-rw-r-- 1 boinc boinc      2560 Jul 29 07:13 pandaJob.out
[2025-07-29 13:30:18] -rw------- 1 boinc boinc    977316 Jul 29 07:15 agis_schedconf.cvmfs.json
[2025-07-29 13:30:18] drwx------ 4 boinc boinc      4096 Jul 29 07:15 pilot3
[2025-07-29 13:30:18] -rw------- 1 boinc boinc 213885626 Jul 29 13:27 HITS.45743349._045576.pool.root.1
[2025-07-29 13:30:18] -rw-rw-r-- 1 boinc boinc       530 Jul 29 13:27 boinc_task_state.xml
[2025-07-29 13:30:18] -rw------- 1 boinc boinc      1025 Jul 29 13:28 memory_monitor_summary.json
[2025-07-29 13:30:18] -rw------- 1 boinc boinc   1589827 Jul 29 13:28 agis_ddmendpoints.agis.ALL.json
[2025-07-29 13:30:18] -rw------- 1 boinc boinc    511195 Jul 29 13:28 log.45743349._045576.job.log.tgz.1
[2025-07-29 13:30:18] -rw------- 1 boinc boinc        96 Jul 29 13:29 pilot_heartbeat.json
[2025-07-29 13:30:18] -rw------- 1 boinc boinc      7770 Jul 29 13:29 heartbeat.json
[2025-07-29 13:30:18] -rw-rw-r-- 1 boinc boinc        28 Jul 29 13:30 wrapper_checkpoint.txt
[2025-07-29 13:30:18] -rw-rw-r-- 1 boinc boinc      8192 Jul 29 13:30 boinc_mmap_file
[2025-07-29 13:30:18] -rw------- 1 boinc boinc       822 Jul 29 13:30 pilotlog.txt
[2025-07-29 13:30:18] -rw------- 1 boinc boinc   2105711 Jul 29 13:30 log.45743349._045576.job.log.1
[2025-07-29 13:30:18] -rw------- 1 boinc boinc       357 Jul 29 13:30 output.list
[2025-07-29 13:30:18] -rw-rw-r-- 1 boinc boinc       620 Jul 29 13:30 runtime_log
[2025-07-29 13:30:18] -rw------- 1 boinc boinc   2631680 Jul 29 13:30 result.tar.gz
[2025-07-29 13:30:18] -rw-rw-r-- 1 boinc boinc      8958 Jul 29 13:30 runtime_log.err
[2025-07-29 13:30:18] -rw------- 1 boinc boinc       652 Jul 29 13:30 pmIKDmkz7z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwAULDmuYwUSm.diag
[2025-07-29 13:30:18] -rw-rw-r-- 1 boinc boinc     20901 Jul 29 13:30 stderr.txt
[2025-07-29 13:30:19] HITS file was successfully produced:
[2025-07-29 13:30:19] -rw------- 1 boinc boinc 213885626 Jul 29 13:27 shared/HITS.pool.root.1
[2025-07-29 13:30:19]  *** Contents of shared directory: ***
[2025-07-29 13:30:19] total 356624
[2025-07-29 13:30:19] -rw-r--r-- 2 boinc boinc 148090710 Jul 29 07:13 ATLAS.root_0
[2025-07-29 13:30:19] -rw-r--r-- 2 boinc boinc     15095 Jul 29 07:13 start_atlas.sh
[2025-07-29 13:30:19] -rw-r--r-- 2 boinc boinc    542883 Jul 29 07:13 input.tar.gz
[2025-07-29 13:30:19] -rw------- 1 boinc boinc 213885626 Jul 29 13:27 HITS.pool.root.1
[2025-07-29 13:30:19] -rw------- 1 boinc boinc   2631680 Jul 29 13:30 result.tar.gz
13:30:20 (2636616): run_atlas exited; CPU time 35153.330716
13:30:20 (2636616): called boinc_finish(0)

</stderr_txt>
]]>

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