Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:47:16 (2338569): wrapper (7.7.26015): starting
23:47:16 (2338569): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 23:47:16] Arguments: --nthreads 12
[2025-07-26 23:47:16] Threads: 12
[2025-07-26 23:47:16] Checking for CVMFS
[2025-07-26 23:47:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 23:47:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 23:47:16] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 23:47:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 23:47:16] 2.11.5.0 21180 36709 367708 148803 1 455 42582018 45568000 11298 130560 0 287702645 99.734 224711491 28495 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-26 23:47:16] CVMFS is ok
[2025-07-26 23:47:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 23:47:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 23:47:16] Further information can be found at the LHC@home message board.
[2025-07-26 23:47:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 23:47:16] Checking for apptainer binary...
[2025-07-26 23:47:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 23:47:16] Running /usr/bin/apptainer --version
[2025-07-26 23:47:16] apptainer version 1.4.1-1.el9
[2025-07-26 23:47:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 23:47:16] wns0088.triumf.lcg
[2025-07-26 23:47:16] apptainer works
[2025-07-26 23:47:16] Set ATHENA_PROC_NUMBER=12
[2025-07-26 23:47:16] Set ATHENA_CORE_NUMBER=12
[2025-07-26 23:47:16] Starting ATLAS job with PandaID=6745983058
[2025-07-26 23:47:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 23:50:40]  *** The last 200 lines of the pilot log: ***
[2025-07-26 23:50:40] 2025-07-27 06:50:07,703 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 23:50:40] 2025-07-27 06:50:07,703 | WARNING  | found no stored workdir sizes
[2025-07-26 23:50:40] 2025-07-27 06:50:07,703 | INFO     | will not add max space = 0 B to job metrics
[2025-07-26 23:50:40] 2025-07-27 06:50:07,703 | WARNING  | wrong length of table data, x=[1753598872.0], y=[874.0] (must be same and length>=4)
[2025-07-26 23:50:40] 2025-07-27 06:50:07,703 | INFO     | could have reported an average CPU frequency of 2409 MHz (4 samples)
[2025-07-26 23:50:40] 2025-07-27 06:50:07,704 | INFO     | ..............................
[2025-07-26 23:50:40] 2025-07-27 06:50:07,704 | INFO     | . Timing measurements:
[2025-07-26 23:50:40] 2025-07-27 06:50:07,704 | INFO     | . get job = 0 s
[2025-07-26 23:50:40] 2025-07-27 06:50:07,704 | INFO     | . initial setup = 8 s
[2025-07-26 23:50:40] 2025-07-27 06:50:07,704 | INFO     | . payload setup = 3 s
[2025-07-26 23:50:40] 2025-07-27 06:50:07,704 | INFO     | . stage-in = 0 s
[2025-07-26 23:50:40] 2025-07-27 06:50:07,704 | INFO     | . payload execution = 14 s
[2025-07-26 23:50:40] 2025-07-27 06:50:07,705 | INFO     | . stage-out = 0 s
[2025-07-26 23:50:40] 2025-07-27 06:50:07,705 | INFO     | . log creation = 0 s
[2025-07-26 23:50:40] 2025-07-27 06:50:07,705 | INFO     | ..............................
[2025-07-26 23:50:40] 2025-07-27 06:50:07,705 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 23:50:40] 2025-07-27 06:50:07,705 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745983058/pilotlog.txt
[2025-07-26 23:50:40] 2025-07-27 06:50:07,715 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-26 23:50:40] - Log from pilotlog.txt -
[2025-07-26 23:50:40] 2025-07-27 06:50:07,702 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 23:50:40] 2025-07-27 06:50:07,702 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 23:50:40] 2025-07-27 06:50:07,703 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 23:50:40] 2025-07-27 06:50:07,703 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 23:50:40] 2025-07-27 06:50:07,703 | WARNING  | found no stored workdir sizes
[2025-07-26 23:50:40] 2025-07-27 06:50:07,703 | INFO     | will not add max space = 0 B to job metrics
[2025-07-26 23:50:40] 2025-07-27 06:50:07,703 | WARNING  | wrong length of table data, x=[1753598872.0], y=[874.0] (must be same and length>=4)
[2025-07-26 23:50:40] 2025-07-27 06:50:07,703 | INFO     | could have reported an average CPU frequency of 2409 MHz (4 samples)
[2025-07-26 23:50:40] 2025-07-27 06:50:07,704 | INFO     | ..............................
[2025-07-26 23:50:40] 2025-07-27 06:50:07,704 | INFO     | . Timing measurements:
[2025-07-26 23:50:40] 2025-07-27 06:50:07,704 | INFO     | . get job = 0 s
[2025-07-26 23:50:40] 2025-07-27 06:50:07,704 | INFO     | . initial setup = 8 s
[2025-07-26 23:50:40] 2025-07-27 06:50:07,704 | INFO     | . payload setup = 3 s
[2025-07-26 23:50:40] 2025-07-27 06:50:07,704 | INFO     | . stage-in = 0 s
[2025-07-26 23:50:40] 2025-07-27 06:50:07,704 | INFO     | . payload execution = 14 s
[2025-07-26 23:50:40] 2025-07-27 06:50:07,705 | INFO     | . stage-out = 0 s
[2025-07-26 23:50:40] 2025-07-27 06:50:07,705 | INFO     | . log creation = 0 s
[2025-07-26 23:50:40] 2025-07-27 06:50:07,705 | INFO     | ..............................
[2025-07-26 23:50:40] 2025-07-27 06:50:07,705 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 23:50:40] 2025-07-27 06:50:07,705 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745983058/pilotlog.txt
[2025-07-26 23:50:40] 2025-07-27 06:50:07,716 | WARNING  | 
[2025-07-26 23:50:40] [begin log extracts]
[2025-07-26 23:50:40] - Log from pilotlog.txt -
[2025-07-26 23:50:40] 2025-07-27 06:50:07,702 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 23:50:40] 2025-07-27 06:50:07,702 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 23:50:40] 2025-07-27 06:50:07,703 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 23:50:40] 2025-07-27 06:50:07,703 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 23:50:40] 2025-07-27 06:50:07,703 | WARNING  | found no stored workdir sizes
[2025-07-26 23:50:40] 2025-07-27 06:50:07,703 | INFO     | will not add max space = 0 B to job metrics
[2025-07-26 23:50:40] 2025-07-27 06:50:07,703 | WARNING  | wrong length of table data, x=[1753598872.0], y=[874.0] (must be same and length>=4)
[2025-07-26 23:50:40] 2025-07-27 06:50:07,703 | INFO     | could have reported an average CPU frequency of 2409 MHz (4 samples)
[2025-07-26 23:50:40] 2025-07-27 06:50:07,704 | INFO     | ..............................
[2025-07-26 23:50:40] 2025-07-27 06:50:07,704 | INFO     | . Timing measurements:
[2025-07-26 23:50:40] 2025-07-27 06:50:07,704 | INFO     | . get job = 0 s
[2025-07-26 23:50:40] 2025-07-27 06:50:07,704 | INFO     | . initial setup = 8 s
[2025-07-26 23:50:40] 2025-07-27 06:50:07,704 | INFO     | . payload setup = 3 s
[2025-07-26 23:50:40] 2025-07-27 06:50:07,704 | INFO     | . stage-in = 0 s
[2025-07-26 23:50:40] 2025-07-27 06:50:07,704 | INFO     | . payload execution = 14 s
[2025-07-26 23:50:40] 2025-07-27 06:50:07,705 | INFO     | . stage-out = 0 s
[2025-07-26 23:50:40] 2025-07-27 06:50:07,705 | INFO     | . log creation = 0 s
[2025-07-26 23:50:40] 2025-07-27 06:50:07,705 | INFO     | ..............................
[2025-07-26 23:50:40] 2025-07-27 06:50:07,705 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 23:50:40] 2025-07-27 06:50:07,705 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745983058/pilotlog.txt
[2025-07-26 23:50:40] [end log extracts]
[2025-07-26 23:50:40] 2025-07-27 06:50:07,716 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-26 23:50:40] 2025-07-27 06:50:07,717 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-26 23:50:40] 2025-07-27 06:50:08,211 | INFO     | 
[2025-07-26 23:50:40] 2025-07-27 06:50:08,211 | INFO     | job summary report
[2025-07-26 23:50:40] 2025-07-27 06:50:08,211 | INFO     | --------------------------------------------------
[2025-07-26 23:50:40] 2025-07-27 06:50:08,211 | INFO     | PanDA job id: 6745983058
[2025-07-26 23:50:40] 2025-07-27 06:50:08,211 | INFO     | task id: 45758894
[2025-07-26 23:50:40] 2025-07-27 06:50:08,211 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-26 23:47:58,966 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-26 23:50:40] 2025-07-27 06:50:08,211 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 23:50:40] 2025-07-27 06:50:08,211 | INFO     | pilot state: failed 
[2025-07-26 23:50:40] 2025-07-27 06:50:08,211 | INFO     | transexitcode: 65
[2025-07-26 23:50:40] 2025-07-27 06:50:08,211 | INFO     | exeerrorcode: 65
[2025-07-26 23:50:40] 2025-07-27 06:50:08,211 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-26 23:50:40] 2025-07-27 06:50:08,211 | INFO     | exitcode: 65
[2025-07-26 23:50:40] 2025-07-27 06:50:08,211 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-26 23:50:40] 2025-07-27 06:50:08,211 | INFO     | cpuconsumptiontime: 16 s
[2025-07-26 23:50:40] 2025-07-27 06:50:08,212 | INFO     | nevents: 0
[2025-07-26 23:50:40] 2025-07-27 06:50:08,212 | INFO     | neventsw: 0
[2025-07-26 23:50:40] 2025-07-27 06:50:08,212 | INFO     | pid: 2348448
[2025-07-26 23:50:40] 2025-07-27 06:50:08,212 | INFO     | pgrp: 2348448
[2025-07-26 23:50:40] 2025-07-27 06:50:08,212 | INFO     | corecount: 12
[2025-07-26 23:50:40] 2025-07-27 06:50:08,212 | INFO     | event service: False
[2025-07-26 23:50:40] 2025-07-27 06:50:08,212 | INFO     | sizes: {0: 2397276, 1: 2397475, 3: 2397737, 11: 2397765, 22: 2425280, 24: 2425280, 144: 2425574}
[2025-07-26 23:50:40] 2025-07-27 06:50:08,212 | INFO     | --------------------------------------------------
[2025-07-26 23:50:40] 2025-07-27 06:50:08,212 | INFO     | 
[2025-07-26 23:50:40] 2025-07-27 06:50:08,212 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-26 23:50:40] 2025-07-27 06:50:08,226 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 23:50:40] 2025-07-27 06:50:08,226 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 23:50:40] 2025-07-27 06:50:08,226 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 23:50:40] 2025-07-27 06:50:08,226 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 23:50:40] 2025-07-27 06:50:08,227 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 23:50:40] 2025-07-27 06:50:08,227 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 23:50:40] 2025-07-27 06:50:08,227 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 23:50:40] 2025-07-27 06:50:08,227 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 23:50:40] 2025-07-27 06:50:08,227 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 23:50:40] 2025-07-27 06:50:08,227 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 23:50:40] 2025-07-27 06:50:08,227 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 23:50:40] 2025-07-27 06:50:08,227 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 23:50:40] 2025-07-27 06:50:08,227 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 23:50:40] 2025-07-27 06:50:08,227 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 23:50:40] 2025-07-27 06:50:08,227 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 23:50:40] 2025-07-27 06:50:08,227 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 23:50:40] 2025-07-27 06:50:08,227 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 23:50:40] 2025-07-27 06:50:08,227 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 23:50:40] 2025-07-27 06:50:08,227 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 23:50:40] 2025-07-27 06:50:08,227 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 23:50:40] 2025-07-27 06:50:08,227 | INFO     | job 6745983058 has completed (purged errors)
[2025-07-26 23:50:40] 2025-07-27 06:50:08,228 | INFO     | overall cleanup function is called
[2025-07-26 23:50:40] 2025-07-27 06:50:09,234 | INFO     | --- collectZombieJob: --- 10, [2348448]
[2025-07-26 23:50:40] 2025-07-27 06:50:09,234 | INFO     | zombie collector waiting for pid 2348448
[2025-07-26 23:50:40] 2025-07-27 06:50:09,234 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 23:50:40] 2025-07-27 06:50:09,234 | INFO     | collected zombie processes
[2025-07-26 23:50:40] 2025-07-27 06:50:09,234 | INFO     | will attempt to kill all subprocesses of pid=2348448
[2025-07-26 23:50:40] 2025-07-27 06:50:09,369 | INFO     | process IDs to be killed: [2348448] (in reverse order)
[2025-07-26 23:50:40] 2025-07-27 06:50:09,424 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 23:50:40] 2025-07-27 06:50:09,424 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 23:50:40] 2025-07-27 06:50:09,430 | INFO     | did not find any defunct processes belonging to 2348448
[2025-07-26 23:50:40] 2025-07-27 06:50:09,436 | INFO     | did not find any defunct processes belonging to 2348448
[2025-07-26 23:50:40] 2025-07-27 06:50:09,436 | INFO     | ready for new job
[2025-07-26 23:50:40] 2025-07-27 06:50:09,436 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 23:50:40] 2025-07-27 06:50:09,437 | INFO     | ***************************************
[2025-07-26 23:50:40] 2025-07-27 06:50:09,438 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 23:50:40] 2025-07-27 06:50:09,438 | INFO     | ***************************************
[2025-07-26 23:50:40] 2025-07-27 06:50:09,438 | INFO     | 
[2025-07-26 23:50:40] 2025-07-27 06:50:09,439 | INFO     | architecture information:
[2025-07-26 23:50:40] 2025-07-27 06:50:09,440 | INFO     | executing command: cat /etc/os-release
[2025-07-26 23:50:40] 2025-07-27 06:50:09,449 | INFO     | cat /etc/os-release:
[2025-07-26 23:50:40] NAME="CentOS Linux"
[2025-07-26 23:50:40] VERSION="7 (Core)"
[2025-07-26 23:50:40] ID="centos"
[2025-07-26 23:50:40] ID_LIKE="rhel fedora"
[2025-07-26 23:50:40] VERSION_ID="7"
[2025-07-26 23:50:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 23:50:40] ANSI_COLOR="0;31"
[2025-07-26 23:50:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 23:50:40] HOME_URL="https://www.centos.org/"
[2025-07-26 23:50:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 23:50:40] 
[2025-07-26 23:50:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 23:50:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 23:50:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 23:50:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 23:50:40] 
[2025-07-26 23:50:40] 2025-07-27 06:50:09,450 | INFO     | ***************************************
[2025-07-26 23:50:40] 2025-07-27 06:50:09,953 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-26 23:50:40] 2025-07-27 06:50:09,963 | INFO     | sufficient remaining disk space (2106348011520 B)
[2025-07-26 23:50:40] 2025-07-27 06:50:09,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 23:50:40] 2025-07-27 06:50:09,964 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 23:50:40] 2025-07-27 06:50:09,964 | INFO     | update_server=False
[2025-07-26 23:50:40] 2025-07-27 06:50:09,964 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 23:50:40] 2025-07-27 06:50:09,964 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 23:50:40] 2025-07-27 06:50:10,115 | INFO     | all data control threads have been joined
[2025-07-26 23:50:40] 2025-07-27 06:50:10,424 | INFO     | all job control threads have been joined
[2025-07-26 23:50:40] 2025-07-27 06:50:10,733 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:50:40] 2025-07-27 06:50:10,733 | INFO     | aborting loop
[2025-07-26 23:50:40] 2025-07-27 06:50:10,969 | INFO     | [job] retrieve thread has finished
[2025-07-26 23:50:40] 2025-07-27 06:50:10,990 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 23:50:40] 2025-07-27 06:50:11,041 | INFO     | all payload control threads have been joined
[2025-07-26 23:50:40] 2025-07-27 06:50:11,121 | INFO     | [data] control thread has finished
[2025-07-26 23:50:40] 2025-07-27 06:50:11,121 | INFO     | [payload] validate_post thread has finished
[2025-07-26 23:50:40] 2025-07-27 06:50:11,335 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 23:50:40] 2025-07-27 06:50:11,429 | INFO     | [job] control thread has finished
[2025-07-26 23:50:40] 2025-07-27 06:50:11,460 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 23:50:40] 2025-07-27 06:50:11,553 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 23:50:40] 2025-07-27 06:50:11,738 | INFO     | [job] job monitor thread has finished
[2025-07-26 23:50:40] 2025-07-27 06:50:11,754 | INFO     | [payload] failed_post thread has finished
[2025-07-26 23:50:40] 2025-07-27 06:50:11,969 | INFO     | [data] copytool_out thread has finished
[2025-07-26 23:50:40] 2025-07-27 06:50:12,046 | INFO     | [payload] control thread has finished
[2025-07-26 23:50:40] 2025-07-27 06:50:12,246 | INFO     | [job] validate thread has finished
[2025-07-26 23:50:40] 2025-07-27 06:50:12,352 | INFO     | [data] copytool_in thread has finished
[2025-07-26 23:50:40] 2025-07-27 06:50:12,374 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 23:50:40] 2025-07-27 06:50:12,783 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:50:40] 2025-07-27 06:50:13,788 | INFO     | [job] queue monitor thread has finished
[2025-07-26 23:50:40] 2025-07-27 06:50:15,470 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 23:50:40] 2025-07-27 06:50:16,849 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140365803108160)>', '<ExcThread(monitor, started 140365403240192)>']
[2025-07-26 23:50:40] 2025-07-27 06:50:21,853 | INFO     | all workflow threads have been joined
[2025-07-26 23:50:40] 2025-07-27 06:50:21,853 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 23:50:40] 2025-07-27 06:50:21,853 | INFO     | traces error code: 0
[2025-07-26 23:50:40] 2025-07-27 06:50:21,853 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 23:50:40] 2025-07-27 06:50:40,564 | INFO     | PID=2342140 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 23:50:40] 2025-07-27 06:50:40,565 | INFO     | .. there are 14 such processes running
[2025-07-26 23:50:40] 2025-07-27 06:50:40,566 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 23:50:40] 2025-07-27 06:50:40,566 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 23:50:40] 2025-07-27 06:50:40,566 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 23:50:40] 2025-07-27 06:50:40,566 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 23:50:40] 2025-07-27 06:50:40,566 | CRITICAL | thread 'MainThread' is not alive
[2025-07-26 23:50:40] 2025-07-27 06:50:40,566 | INFO     | [monitor] control thread has ended
[2025-07-26 23:50:40] 2025-07-27 06:50:40,676 [wrapper] ==== pilot stdout END ====
[2025-07-26 23:50:40] 2025-07-27 06:50:40,678 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 23:50:40] 2025-07-27 06:50:40,680 [wrapper] pilotpid: 2342140
[2025-07-26 23:50:40] 2025-07-27 06:50:40,682 [wrapper] Pilot exit status: 0
[2025-07-26 23:50:40] 2025-07-27 06:50:40,689 [wrapper] pandaids: 6745983058
[2025-07-26 23:50:40] 2025-07-27 06:50:40,726 [wrapper] cleanup supervisor_pilot 2342146 2342141
[2025-07-26 23:50:40] 2025-07-27 06:50:40,728 [wrapper] Test setup, not cleaning
[2025-07-26 23:50:40] 2025-07-27 06:50:40,730 [wrapper] apfmon messages muted
[2025-07-26 23:50:40] 2025-07-27 06:50:40,732 [wrapper] ==== wrapper stdout END ====
[2025-07-26 23:50:40] 2025-07-27 06:50:40,734 [wrapper] ==== wrapper stderr END ====
[2025-07-26 23:50:40]  *** Error codes and diagnostics ***
[2025-07-26 23:50:40]     "exeErrorCode": 65,
[2025-07-26 23:50:40]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-26 23:50:40]     "pilotErrorCode": 1305,
[2025-07-26 23:50:40]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-26 23:50:40]  *** Listing of results directory ***
[2025-07-26 23:50:40] total 235508
[2025-07-26 23:50:40] -rw-r--r--. 1 boinc boinc    530466 Jul 26 20:36 pilot3.tar.gz
[2025-07-26 23:50:40] -rw-r--r--. 1 boinc boinc      5112 Jul 26 21:11 queuedata.json
[2025-07-26 23:50:40] -rwx------. 1 boinc boinc     36292 Jul 26 21:12 runpilot2-wrapper.sh
[2025-07-26 23:50:40] -rw-r--r--. 1 boinc boinc       100 Jul 26 23:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 23:50:40] -rwxr-xr-x. 1 boinc boinc      7986 Jul 26 23:47 run_atlas
[2025-07-26 23:50:40] -rw-r--r--. 1 boinc boinc       105 Jul 26 23:47 job.xml
[2025-07-26 23:50:40] -rw-r--r--. 1 boinc boinc      6596 Jul 26 23:47 init_data.xml
[2025-07-26 23:50:40] -rw-r--r--. 2 boinc boinc 237095550 Jul 26 23:47 EVNT.45758892._000001.pool.root.1
[2025-07-26 23:50:40] -rw-r--r--. 2 boinc boinc     15095 Jul 26 23:47 start_atlas.sh
[2025-07-26 23:50:40] drwxrwx--x. 2 boinc boinc      4096 Jul 26 23:47 shared
[2025-07-26 23:50:40] -rw-r--r--. 2 boinc boinc    542880 Jul 26 23:47 input.tar.gz
[2025-07-26 23:50:40] -rw-r--r--. 1 boinc boinc         0 Jul 26 23:47 boinc_lockfile
[2025-07-26 23:50:40] -rw-r--r--. 1 boinc boinc      2544 Jul 26 23:47 pandaJob.out
[2025-07-26 23:50:40] -rw-------. 1 boinc boinc    980125 Jul 26 23:47 agis_schedconf.cvmfs.json
[2025-07-26 23:50:40] -rw-------. 1 boinc boinc   1593052 Jul 26 23:47 agis_ddmendpoints.agis.ALL.json
[2025-07-26 23:50:40] drwx------. 4 boinc boinc      4096 Jul 26 23:47 pilot3
[2025-07-26 23:50:40] -rw-------. 1 boinc boinc       950 Jul 26 23:48 memory_monitor_summary.json
[2025-07-26 23:50:40] -rw-------. 1 boinc boinc     20649 Jul 26 23:48 log.45758894._000019.job.log.tgz.1
[2025-07-26 23:50:40] -rw-r--r--. 1 boinc boinc       522 Jul 26 23:48 boinc_task_state.xml
[2025-07-26 23:50:40] -rw-------. 1 boinc boinc      8389 Jul 26 23:50 heartbeat.json
[2025-07-26 23:50:40] -rw-r--r--. 1 boinc boinc      8192 Jul 26 23:50 boinc_mmap_file
[2025-07-26 23:50:40] -rw-r--r--. 1 boinc boinc        22 Jul 26 23:50 wrapper_checkpoint.txt
[2025-07-26 23:50:40] -rw-------. 1 boinc boinc       893 Jul 26 23:50 pilotlog.txt
[2025-07-26 23:50:40] -rw-------. 1 boinc boinc        95 Jul 26 23:50 pilot_heartbeat.json
[2025-07-26 23:50:40] -rw-------. 1 boinc boinc     74303 Jul 26 23:50 log.45758894._000019.job.log.1
[2025-07-26 23:50:40] -rw-------. 1 boinc boinc       188 Jul 26 23:50 output.list
[2025-07-26 23:50:40] -rw-r--r--. 1 boinc boinc       620 Jul 26 23:50 runtime_log
[2025-07-26 23:50:40] -rw-------. 1 boinc boinc    112640 Jul 26 23:50 result.tar.gz
[2025-07-26 23:50:40] -rw-r--r--. 1 boinc boinc      8485 Jul 26 23:50 runtime_log.err
[2025-07-26 23:50:40] -rw-------. 1 boinc boinc       644 Jul 26 23:50 F62MDm6u7z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmJt1KDmIxCEKm.diag
[2025-07-26 23:50:40] -rw-r--r--. 1 boinc boinc     21629 Jul 26 23:50 stderr.txt
[2025-07-26 23:50:40] No HITS result produced
[2025-07-26 23:50:40]  *** Contents of shared directory: ***
[2025-07-26 23:50:40] total 232200
[2025-07-26 23:50:40] -rw-r--r--. 2 boinc boinc 237095550 Jul 26 23:47 ATLAS.root_0
[2025-07-26 23:50:40] -rw-r--r--. 2 boinc boinc     15095 Jul 26 23:47 start_atlas.sh
[2025-07-26 23:50:40] -rw-r--r--. 2 boinc boinc    542880 Jul 26 23:47 input.tar.gz
[2025-07-26 23:50:40] -rw-------. 1 boinc boinc    112640 Jul 26 23:50 result.tar.gz
23:50:42 (2338569): run_atlas exited; CPU time 19.140541
23:50:42 (2338569): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN