Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:24:59 (2860492): wrapper (7.7.26015): starting
02:24:59 (2860492): wrapper: running run_atlas (--nthreads 10)
[2025-07-27 02:24:59] Arguments: --nthreads 10
[2025-07-27 02:24:59] Threads: 10
[2025-07-27 02:24:59] Checking for CVMFS
[2025-07-27 02:24:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 02:24:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 02:24:59] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 02:24:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 02:24:59] 2.13.0.0 215257 18364 281572 148803 2 64 21462993 32935936 11648 16776704 0 50097873 99.537 65114403 24782 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 02:24:59] CVMFS is ok
[2025-07-27 02:24:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 02:24:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 02:24:59] Further information can be found at the LHC@home message board.
[2025-07-27 02:24:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 02:24:59] Checking for apptainer binary...
[2025-07-27 02:24:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 02:24:59] Running /usr/bin/apptainer --version
[2025-07-27 02:24:59] apptainer version 1.4.1-1.el9
[2025-07-27 02:24:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 02:25:00] c-5-1.aglt2.org
[2025-07-27 02:25:00] apptainer works
[2025-07-27 02:25:00] Set ATHENA_PROC_NUMBER=10
[2025-07-27 02:25:00] Set ATHENA_CORE_NUMBER=10
[2025-07-27 02:25:00] Starting ATLAS job with PandaID=6745838478
[2025-07-27 02:25:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 04:50:33]  *** The last 200 lines of the pilot log: ***
[2025-07-27 04:50:33] 2025-07-27 08:49:56,683 | INFO     | PID=2864365 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 04:50:33] 2025-07-27 08:49:56,683 | INFO     | .. there are 16 such processes running
[2025-07-27 04:50:33] 2025-07-27 08:49:58,520 | INFO     | monitor loop #584: job 0:6745838478 is in state 'finished'
[2025-07-27 04:50:33] 2025-07-27 08:49:58,521 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 04:50:33] 2025-07-27 08:50:00,280 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 04:50:33] 2025-07-27 08:50:00,288 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2720.1530249999987
[2025-07-27 04:50:33] 2025-07-27 08:50:00,294 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745838478/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 04:50:33] 2025-07-27 08:50:00,295 | INFO     | extracted standard info from prmon json
[2025-07-27 04:50:33] 2025-07-27 08:50:00,296 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 04:50:33] 2025-07-27 08:50:00,296 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 04:50:33] 2025-07-27 08:50:00,296 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 04:50:33] 2025-07-27 08:50:00,296 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 04:50:33] 2025-07-27 08:50:00,299 | INFO     | fitting pss+swap vs Time
[2025-07-27 04:50:33] 2025-07-27 08:50:00,300 | INFO     | sum of square deviations: 887819422.9577459
[2025-07-27 04:50:33] 2025-07-27 08:50:00,301 | INFO     | sum of deviations: -20109392426.154926
[2025-07-27 04:50:33] 2025-07-27 08:50:00,301 | INFO     | mean x: 1753601848.633803
[2025-07-27 04:50:33] 2025-07-27 08:50:00,301 | INFO     | mean y: 2367239.323943662
[2025-07-27 04:50:33] 2025-07-27 08:50:00,301 | INFO     | -- intersect: 39722007091.22904
[2025-07-27 04:50:33] 2025-07-27 08:50:00,301 | INFO     | intersect: 39722007091.22904
[2025-07-27 04:50:33] 2025-07-27 08:50:00,301 | INFO     | chi2: 2.128447774276864
[2025-07-27 04:50:33] 2025-07-27 08:50:00,302 | INFO     | sum of square deviations: 797302590.3649652
[2025-07-27 04:50:33] 2025-07-27 08:50:00,302 | INFO     | sum of deviations: -17870544620.29927
[2025-07-27 04:50:33] 2025-07-27 08:50:00,303 | INFO     | mean x: 1753601696.1386862
[2025-07-27 04:50:33] 2025-07-27 08:50:00,303 | INFO     | mean y: 2370976.2262773723
[2025-07-27 04:50:33] 2025-07-27 08:50:00,303 | INFO     | -- intersect: 39307169099.02429
[2025-07-27 04:50:33] 2025-07-27 08:50:00,303 | INFO     | intersect: 39307169099.02429
[2025-07-27 04:50:33] 2025-07-27 08:50:00,303 | INFO     | chi2: 2.1268332793749143
[2025-07-27 04:50:33] 2025-07-27 08:50:00,303 | INFO     | current chi2=2.1268332793749143 (change=0.07585316029180794 %)
[2025-07-27 04:50:33] 2025-07-27 08:50:00,303 | INFO     | right removable region: 136
[2025-07-27 04:50:33] 2025-07-27 08:50:00,304 | INFO     | sum of square deviations: 797291000.3649652
[2025-07-27 04:50:33] 2025-07-27 08:50:00,304 | INFO     | sum of deviations: -43425410522.00728
[2025-07-27 04:50:33] 2025-07-27 08:50:00,305 | INFO     | mean x: 1753602001.1386862
[2025-07-27 04:50:33] 2025-07-27 08:50:00,305 | INFO     | mean y: 2406063.7372262776
[2025-07-27 04:50:33] 2025-07-27 08:50:00,305 | INFO     | -- intersect: 95514442141.90988
[2025-07-27 04:50:33] 2025-07-27 08:50:00,305 | INFO     | intersect: 95514442141.90988
[2025-07-27 04:50:33] 2025-07-27 08:50:00,305 | INFO     | chi2: 0.41144882238105934
[2025-07-27 04:50:33] 2025-07-27 08:50:00,305 | INFO     | current chi2=0.41144882238105934 (change=80.6690665679665 %)
[2025-07-27 04:50:33] 2025-07-27 08:50:00,306 | INFO     | sum of square deviations: 713134790.2651511
[2025-07-27 04:50:33] 2025-07-27 08:50:00,306 | INFO     | sum of deviations: -43408395980.765144
[2025-07-27 04:50:33] 2025-07-27 08:50:00,307 | INFO     | mean x: 1753602153.6439395
[2025-07-27 04:50:33] 2025-07-27 08:50:00,307 | INFO     | mean y: 2405885.856060606
[2025-07-27 04:50:33] 2025-07-27 08:50:00,307 | INFO     | -- intersect: 106743877087.6692
[2025-07-27 04:50:33] 2025-07-27 08:50:00,307 | INFO     | intersect: 106743877087.6692
[2025-07-27 04:50:33] 2025-07-27 08:50:00,307 | INFO     | chi2: 0.3290499657326976
[2025-07-27 04:50:33] 2025-07-27 08:50:00,307 | INFO     | current chi2=0.3290499657326976 (change=20.02651415345377 %)
[2025-07-27 04:50:33] 2025-07-27 08:50:00,307 | INFO     | left removable region: 20
[2025-07-27 04:50:33] 2025-07-27 08:50:00,308 | INFO     | sum of square deviations: 483969074.2068957
[2025-07-27 04:50:33] 2025-07-27 08:50:00,308 | INFO     | sum of deviations: -30750324867.344837
[2025-07-27 04:50:33] 2025-07-27 08:50:00,308 | INFO     | mean x: 1753602275.6551723
[2025-07-27 04:50:33] 2025-07-27 08:50:00,309 | INFO     | mean y: 2390675.7413793104
[2025-07-27 04:50:33] 2025-07-27 08:50:00,309 | INFO     | -- intersect: 111422401867.32304
[2025-07-27 04:50:33] 2025-07-27 08:50:00,309 | INFO     | intersect: 111422401867.32304
[2025-07-27 04:50:33] 2025-07-27 08:50:00,309 | INFO     | chi2: 0.3097501952202683
[2025-07-27 04:50:33] 2025-07-27 08:50:00,309 | INFO     | -- intersect: 111422401867.32304
[2025-07-27 04:50:33] 2025-07-27 08:50:00,309 | INFO     | current memory leak: -63.54 B/s (using 116 data points, chi2=0.31)
[2025-07-27 04:50:33] 2025-07-27 08:50:00,310 | INFO     | could have reported an average CPU frequency of 2627 MHz (8 samples)
[2025-07-27 04:50:33] 2025-07-27 08:50:00,310 | INFO     | ..............................
[2025-07-27 04:50:33] 2025-07-27 08:50:00,310 | INFO     | . Timing measurements:
[2025-07-27 04:50:33] 2025-07-27 08:50:00,310 | INFO     | . get job = 0 s
[2025-07-27 04:50:33] 2025-07-27 08:50:00,311 | INFO     | . initial setup = 3 s
[2025-07-27 04:50:33] 2025-07-27 08:50:00,311 | INFO     | . payload setup = 9 s
[2025-07-27 04:50:33] 2025-07-27 08:50:00,311 | INFO     | . stage-in = 0 s
[2025-07-27 04:50:33] 2025-07-27 08:50:00,311 | INFO     | . payload execution = 8644 s
[2025-07-27 04:50:33] 2025-07-27 08:50:00,311 | INFO     | . stage-out = 0 s
[2025-07-27 04:50:33] 2025-07-27 08:50:00,311 | INFO     | . log creation = 0 s
[2025-07-27 04:50:33] 2025-07-27 08:50:00,311 | INFO     | ..............................
[2025-07-27 04:50:33] 2025-07-27 08:50:00,727 | INFO     | 
[2025-07-27 04:50:33] 2025-07-27 08:50:00,728 | INFO     | job summary report
[2025-07-27 04:50:33] 2025-07-27 08:50:00,728 | INFO     | --------------------------------------------------
[2025-07-27 04:50:33] 2025-07-27 08:50:00,728 | INFO     | PanDA job id: 6745838478
[2025-07-27 04:50:33] 2025-07-27 08:50:00,728 | INFO     | task id: 45743349
[2025-07-27 04:50:33] 2025-07-27 08:50:00,728 | INFO     | errors: (none)
[2025-07-27 04:50:33] 2025-07-27 08:50:00,728 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 04:50:33] 2025-07-27 08:50:00,728 | INFO     | pilot state: finished 
[2025-07-27 04:50:33] 2025-07-27 08:50:00,728 | INFO     | transexitcode: 0
[2025-07-27 04:50:33] 2025-07-27 08:50:00,728 | INFO     | exeerrorcode: 0
[2025-07-27 04:50:33] 2025-07-27 08:50:00,728 | INFO     | exeerrordiag: 
[2025-07-27 04:50:33] 2025-07-27 08:50:00,729 | INFO     | exitcode: 0
[2025-07-27 04:50:33] 2025-07-27 08:50:00,729 | INFO     | exitmsg: OK
[2025-07-27 04:50:33] 2025-07-27 08:50:00,729 | INFO     | cpuconsumptiontime: 56220 s
[2025-07-27 04:50:33] 2025-07-27 08:50:00,729 | INFO     | nevents: 400
[2025-07-27 04:50:33] 2025-07-27 08:50:00,729 | INFO     | neventsw: 0
[2025-07-27 04:50:33] 2025-07-27 08:50:00,729 | INFO     | pid: 2870917
[2025-07-27 04:50:33] 2025-07-27 08:50:00,729 | INFO     | pgrp: 2870917
[2025-07-27 04:50:33] 2025-07-27 08:50:00,729 | INFO     | corecount: 10
[2025-07-27 04:50:33] 2025-07-27 08:50:00,729 | INFO     | event service: False
[2025-07-27 04:50:33] 2025-07-27 08:50:00,729 | INFO     | sizes: {0: 2397195, 1: 2397450, 7: 2397712, 12: 2397740, 8657: 2425921, 8659: 2434919, 8661: 2435103, 8668: 2435297}
[2025-07-27 04:50:33] 2025-07-27 08:50:00,729 | INFO     | --------------------------------------------------
[2025-07-27 04:50:33] 2025-07-27 08:50:00,729 | INFO     | 
[2025-07-27 04:50:33] 2025-07-27 08:50:00,730 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 04:50:33] 2025-07-27 08:50:00,749 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 04:50:33] 2025-07-27 08:50:00,749 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 04:50:33] 2025-07-27 08:50:00,750 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 04:50:33] 2025-07-27 08:50:00,750 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 04:50:33] 2025-07-27 08:50:00,750 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 04:50:33] 2025-07-27 08:50:00,750 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 04:50:33] 2025-07-27 08:50:00,750 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 04:50:33] 2025-07-27 08:50:00,750 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 04:50:33] 2025-07-27 08:50:00,750 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 04:50:33] 2025-07-27 08:50:00,750 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 04:50:33] 2025-07-27 08:50:00,750 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 04:50:33] 2025-07-27 08:50:00,750 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 04:50:33] 2025-07-27 08:50:00,751 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 04:50:33] 2025-07-27 08:50:00,751 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 04:50:33] 2025-07-27 08:50:00,751 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 04:50:33] 2025-07-27 08:50:00,751 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 04:50:33] 2025-07-27 08:50:00,751 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 04:50:33] 2025-07-27 08:50:00,751 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 04:50:33] 2025-07-27 08:50:00,751 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 04:50:33] 2025-07-27 08:50:00,751 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 04:50:33] 2025-07-27 08:50:00,751 | INFO     | job 6745838478 has completed (purged errors)
[2025-07-27 04:50:33] 2025-07-27 08:50:00,751 | INFO     | overall cleanup function is called
[2025-07-27 04:50:33] 2025-07-27 08:50:01,759 | INFO     | --- collectZombieJob: --- 10, [2870917]
[2025-07-27 04:50:33] 2025-07-27 08:50:01,760 | INFO     | zombie collector waiting for pid 2870917
[2025-07-27 04:50:33] 2025-07-27 08:50:01,760 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 04:50:33] 2025-07-27 08:50:01,760 | INFO     | collected zombie processes
[2025-07-27 04:50:33] 2025-07-27 08:50:01,760 | INFO     | will attempt to kill all subprocesses of pid=2870917
[2025-07-27 04:50:33] 2025-07-27 08:50:02,069 | INFO     | process IDs to be killed: [2870917] (in reverse order)
[2025-07-27 04:50:33] 2025-07-27 08:50:02,155 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 04:50:33] 2025-07-27 08:50:02,155 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 04:50:33] 2025-07-27 08:50:02,166 | INFO     | did not find any defunct processes belonging to 2870917
[2025-07-27 04:50:33] 2025-07-27 08:50:02,177 | INFO     | did not find any defunct processes belonging to 2870917
[2025-07-27 04:50:33] 2025-07-27 08:50:02,177 | INFO     | ready for new job
[2025-07-27 04:50:33] 2025-07-27 08:50:02,178 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 04:50:33] 2025-07-27 08:50:02,180 | INFO     | ***************************************
[2025-07-27 04:50:33] 2025-07-27 08:50:02,180 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 04:50:33] 2025-07-27 08:50:02,180 | INFO     | ***************************************
[2025-07-27 04:50:33] 2025-07-27 08:50:02,180 | INFO     | 
[2025-07-27 04:50:33] 2025-07-27 08:50:02,182 | INFO     | architecture information:
[2025-07-27 04:50:33] 2025-07-27 08:50:02,182 | INFO     | executing command: cat /etc/os-release
[2025-07-27 04:50:33] 2025-07-27 08:50:02,198 | INFO     | cat /etc/os-release:
[2025-07-27 04:50:33] NAME="CentOS Linux"
[2025-07-27 04:50:33] VERSION="7 (Core)"
[2025-07-27 04:50:33] ID="centos"
[2025-07-27 04:50:33] ID_LIKE="rhel fedora"
[2025-07-27 04:50:33] VERSION_ID="7"
[2025-07-27 04:50:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 04:50:33] ANSI_COLOR="0;31"
[2025-07-27 04:50:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 04:50:33] HOME_URL="https://www.centos.org/"
[2025-07-27 04:50:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 04:50:33] 
[2025-07-27 04:50:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 04:50:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 04:50:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 04:50:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 04:50:33] 
[2025-07-27 04:50:33] 2025-07-27 08:50:02,198 | INFO     | ***************************************
[2025-07-27 04:50:33] 2025-07-27 08:50:02,700 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 04:50:33] 2025-07-27 08:50:02,716 | INFO     | sufficient remaining disk space (76702285824 B)
[2025-07-27 04:50:33] 2025-07-27 08:50:02,717 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 04:50:33] 2025-07-27 08:50:02,717 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 04:50:33] 2025-07-27 08:50:02,717 | INFO     | update_server=False
[2025-07-27 04:50:33] 2025-07-27 08:50:02,717 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 04:50:33] 2025-07-27 08:50:02,718 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 04:50:33] 2025-07-27 08:50:02,718 | INFO     | aborting loop
[2025-07-27 04:50:33] 2025-07-27 08:50:03,153 | INFO     | all data control threads have been joined
[2025-07-27 04:50:33] 2025-07-27 08:50:03,722 | INFO     | [job] retrieve thread has finished
[2025-07-27 04:50:33] 2025-07-27 08:50:03,723 | INFO     | [job] job monitor thread has finished
[2025-07-27 04:50:33] 2025-07-27 08:50:03,847 | INFO     | all job control threads have been joined
[2025-07-27 04:50:33] 2025-07-27 08:50:03,943 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 04:50:33] 2025-07-27 08:50:04,139 | INFO     | all payload control threads have been joined
[2025-07-27 04:50:33] 2025-07-27 08:50:04,158 | INFO     | [data] control thread has finished
[2025-07-27 04:50:33] 2025-07-27 08:50:04,216 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 04:50:33] 2025-07-27 08:50:04,486 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 04:50:33] 2025-07-27 08:50:04,553 | INFO     | [payload] validate_post thread has finished
[2025-07-27 04:50:33] 2025-07-27 08:50:04,617 | INFO     | [payload] failed_post thread has finished
[2025-07-27 04:50:33] 2025-07-27 08:50:04,751 | INFO     | [data] copytool_in thread has finished
[2025-07-27 04:50:33] 2025-07-27 08:50:04,792 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 04:50:33] 2025-07-27 08:50:04,852 | INFO     | [job] control thread has finished
[2025-07-27 04:50:33] 2025-07-27 08:50:05,005 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 04:50:33] 2025-07-27 08:50:05,071 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 04:50:33] 2025-07-27 08:50:05,144 | INFO     | [payload] control thread has finished
[2025-07-27 04:50:33] 2025-07-27 08:50:05,171 | INFO     | [job] validate thread has finished
[2025-07-27 04:50:33] 2025-07-27 08:50:05,417 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 04:50:33] 2025-07-27 08:50:06,221 | INFO     | [data] copytool_out thread has finished
[2025-07-27 04:50:33] 2025-07-27 08:50:06,422 | INFO     | [job] queue monitor thread has finished
[2025-07-27 04:50:33] 2025-07-27 08:50:07,949 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 04:50:33] 2025-07-27 08:50:08,168 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140047240951616)>', '<ExcThread(monitor, started 140046527096576)>']
[2025-07-27 04:50:33] 2025-07-27 08:50:13,193 | INFO     | all workflow threads have been joined
[2025-07-27 04:50:33] 2025-07-27 08:50:13,193 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 04:50:33] 2025-07-27 08:50:13,194 | INFO     | traces error code: 0
[2025-07-27 04:50:33] 2025-07-27 08:50:13,194 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 04:50:33] 2025-07-27 08:50:33,084 | INFO     | PID=2864365 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 04:50:33] 2025-07-27 08:50:33,084 | INFO     | .. there are 16 such processes running
[2025-07-27 04:50:33] 2025-07-27 08:50:33,085 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 04:50:33] 2025-07-27 08:50:33,085 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 04:50:33] 2025-07-27 08:50:33,085 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 04:50:33] 2025-07-27 08:50:33,085 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 04:50:33] 2025-07-27 08:50:33,085 | INFO     | [monitor] control thread has ended
[2025-07-27 04:50:33] 2025-07-27 08:50:33,227 [wrapper] ==== pilot stdout END ====
[2025-07-27 04:50:33] 2025-07-27 08:50:33,231 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 04:50:33] 2025-07-27 08:50:33,234 [wrapper] pilotpid: 2864365
[2025-07-27 04:50:33] 2025-07-27 08:50:33,237 [wrapper] Pilot exit status: 0
[2025-07-27 04:50:33] 2025-07-27 08:50:33,247 [wrapper] pandaids: 6745838478
[2025-07-27 04:50:33] 2025-07-27 08:50:33,303 [wrapper] cleanup supervisor_pilot 3289310 2864366
[2025-07-27 04:50:33] 2025-07-27 08:50:33,307 [wrapper] Test setup, not cleaning
[2025-07-27 04:50:33] 2025-07-27 08:50:33,310 [wrapper] apfmon messages muted
[2025-07-27 04:50:33] 2025-07-27 08:50:33,313 [wrapper] ==== wrapper stdout END ====
[2025-07-27 04:50:33] 2025-07-27 08:50:33,316 [wrapper] ==== wrapper stderr END ====
[2025-07-27 04:50:33]  *** Error codes and diagnostics ***
[2025-07-27 04:50:33]     "exeErrorCode": 0,
[2025-07-27 04:50:33]     "exeErrorDiag": "",
[2025-07-27 04:50:33]     "pilotErrorCode": 0,
[2025-07-27 04:50:33]     "pilotErrorDiag": "",
[2025-07-27 04:50:33]  *** Listing of results directory ***
[2025-07-27 04:50:33] total 350340
[2025-07-27 04:50:33] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 18:38 pilot3.tar.gz
[2025-07-27 04:50:33] -rwx------. 1 boincer umatlas     36292 Jul 26 18:46 runpilot2-wrapper.sh
[2025-07-27 04:50:33] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 18:46 queuedata.json
[2025-07-27 04:50:33] -rw-r--r--. 1 boincer umatlas       100 Jul 27 02:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 04:50:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 02:24 run_atlas
[2025-07-27 04:50:33] -rw-r--r--. 1 boincer umatlas       105 Jul 27 02:24 job.xml
[2025-07-27 04:50:33] -rw-r--r--. 2 boincer umatlas 147057555 Jul 27 02:24 EVNT.45743347._000738.pool.root.1
[2025-07-27 04:50:33] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 02:24 start_atlas.sh
[2025-07-27 04:50:33] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 02:24 shared
[2025-07-27 04:50:33] -rw-r--r--. 2 boincer umatlas    542893 Jul 27 02:24 input.tar.gz
[2025-07-27 04:50:33] -rw-r--r--. 1 boincer umatlas         0 Jul 27 02:24 boinc_lockfile
[2025-07-27 04:50:33] -rw-r--r--. 1 boincer umatlas      2561 Jul 27 02:25 pandaJob.out
[2025-07-27 04:50:33] -rw-------. 1 boincer umatlas    980125 Jul 27 02:25 agis_schedconf.cvmfs.json
[2025-07-27 04:50:33] -rw-------. 1 boincer umatlas   1593052 Jul 27 02:25 agis_ddmendpoints.agis.ALL.json
[2025-07-27 04:50:33] drwx------. 4 boincer umatlas      4096 Jul 27 02:25 pilot3
[2025-07-27 04:50:33] -rw-r--r--. 1 boincer umatlas      6657 Jul 27 04:48 init_data.xml
[2025-07-27 04:50:33] -rw-------. 1 boincer umatlas 205517564 Jul 27 04:49 HITS.45743349._045504.pool.root.1
[2025-07-27 04:50:33] -rw-r--r--. 1 boincer umatlas       529 Jul 27 04:49 boinc_task_state.xml
[2025-07-27 04:50:33] -rw-------. 1 boincer umatlas      1041 Jul 27 04:49 memory_monitor_summary.json
[2025-07-27 04:50:33] -rw-------. 1 boincer umatlas        95 Jul 27 04:49 pilot_heartbeat.json
[2025-07-27 04:50:33] -rw-------. 1 boincer umatlas    365148 Jul 27 04:49 log.45743349._045504.job.log.tgz.1
[2025-07-27 04:50:33] -rw-------. 1 boincer umatlas      7819 Jul 27 04:50 heartbeat.json
[2025-07-27 04:50:33] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 04:50 boinc_mmap_file
[2025-07-27 04:50:33] -rw-r--r--. 1 boincer umatlas        27 Jul 27 04:50 wrapper_checkpoint.txt
[2025-07-27 04:50:33] -rw-------. 1 boincer umatlas       823 Jul 27 04:50 pilotlog.txt
[2025-07-27 04:50:33] -rw-------. 1 boincer umatlas    785547 Jul 27 04:50 log.45743349._045504.job.log.1
[2025-07-27 04:50:33] -rw-------. 1 boincer umatlas       357 Jul 27 04:50 output.list
[2025-07-27 04:50:33] -rw-r--r--. 1 boincer umatlas       620 Jul 27 04:50 runtime_log
[2025-07-27 04:50:33] -rw-------. 1 boincer umatlas   1167360 Jul 27 04:50 result.tar.gz
[2025-07-27 04:50:33] -rw-r--r--. 1 boincer umatlas      8647 Jul 27 04:50 runtime_log.err
[2025-07-27 04:50:33] -rw-------. 1 boincer umatlas       650 Jul 27 04:50 hwnLDmEq2z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmsZ1KDmVAS0Qo.diag
[2025-07-27 04:50:33] -rw-r--r--. 1 boincer umatlas     21309 Jul 27 04:50 stderr.txt
[2025-07-27 04:50:33] HITS file was successfully produced:
[2025-07-27 04:50:33] -rw-------. 1 boincer umatlas 205517564 Jul 27 04:49 shared/HITS.pool.root.1
[2025-07-27 04:50:33]  *** Contents of shared directory: ***
[2025-07-27 04:50:33] total 346008
[2025-07-27 04:50:33] -rw-r--r--. 2 boincer umatlas 147057555 Jul 27 02:24 ATLAS.root_0
[2025-07-27 04:50:33] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 02:24 start_atlas.sh
[2025-07-27 04:50:33] -rw-r--r--. 2 boincer umatlas    542893 Jul 27 02:24 input.tar.gz
[2025-07-27 04:50:33] -rw-------. 1 boincer umatlas 205517564 Jul 27 04:49 HITS.pool.root.1
[2025-07-27 04:50:33] -rw-------. 1 boincer umatlas   1167360 Jul 27 04:50 result.tar.gz
04:50:34 (2860492): run_atlas exited; CPU time 56417.381894
04:50:34 (2860492): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN