Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-27 08:19:56 (75916): Detected: vboxwrapper 26206
2025-07-27 08:19:56 (75916): Detected: BOINC client v8.2.5
2025-07-27 08:19:56 (75916): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-07-27 08:19:57 (75916): Successfully copied 'init_data.xml' to the shared directory.
2025-07-27 08:19:57 (75916): Create VM. (boinc_d00628fb7c36d67e, slot#34)
2025-07-27 08:19:58 (75916): Setting Memory Size for VM. (4096MB)
2025-07-27 08:19:58 (75916): Setting CPU Count for VM. (1)
2025-07-27 08:19:58 (75916): Setting Chipset Options for VM.
2025-07-27 08:19:58 (75916): Setting Graphics Controller Options for VM.
2025-07-27 08:19:59 (75916): Setting Boot Options for VM.
2025-07-27 08:19:59 (75916): Setting Network Configuration for NAT.
2025-07-27 08:19:59 (75916): Enabling VM Network Access.
2025-07-27 08:20:00 (75916): Disabling USB Support for VM.
2025-07-27 08:20:00 (75916): Disabling COM Port Support for VM.
2025-07-27 08:20:00 (75916): Disabling LPT Port Support for VM.
2025-07-27 08:20:00 (75916): Disabling Audio Support for VM.
2025-07-27 08:20:01 (75916): Disabling Clipboard Support for VM.
2025-07-27 08:20:01 (75916): Disabling Drag and Drop Support for VM.
2025-07-27 08:20:01 (75916): Adding storage controller(s) to VM.
2025-07-27 08:20:01 (75916): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-27 08:20:02 (75916): Adding VirtualBox Guest Additions to VM.
2025-07-27 08:20:02 (75916): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-27 08:20:02 (75916): forwarding host port 52289 to guest port 80
2025-07-27 08:20:03 (75916): Enabling remote desktop for VM.
2025-07-27 08:20:03 (75916): Required extension pack not installed, remote desktop not enabled.
2025-07-27 08:20:03 (75916): Enabling shared directory for VM.
2025-07-27 08:20:03 (75916): Starting VM using VBoxManage interface. (boinc_d00628fb7c36d67e, slot#34)
2025-07-27 08:20:08 (75916): Successfully started VM. (PID = '74012')
2025-07-27 08:20:08 (75916): Reporting VM Process ID to BOINC.
2025-07-27 08:20:08 (75916): Guest Log: BIOS: VirtualBox 7.1.8
2025-07-27 08:20:08 (75916): Guest Log: CPUID EDX: 0x178bfbff
2025-07-27 08:20:08 (75916): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-27 08:20:08 (75916): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-27 08:20:08 (75916): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-27 08:20:08 (75916): Detected: Web Application Enabled (http://localhost:52289)
2025-07-27 08:20:08 (75916): Preference change detected
2025-07-27 08:20:08 (75916): Setting CPU throttle for VM. (100%)
2025-07-27 08:20:08 (75916): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-27 08:20:10 (75916): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-27 08:20:10 (75916): Guest Log: BIOS: Booting from Hard Disk...
2025-07-27 08:20:12 (75916): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-27 08:20:12 (75916): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-27 08:20:12 (75916): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-27 08:20:15 (75916): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-27 08:20:15 (75916): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-27 08:20:20 (75916): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-27 08:20:20 (75916): Guest Log: 00:00:00.000128 main     Log opened 2025-07-27T08:20:18.942073000Z
2025-07-27 08:20:20 (75916): Guest Log: 00:00:00.000235 main     OS Product: Linux
2025-07-27 08:20:20 (75916): Guest Log: 00:00:00.000262 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-27 08:20:20 (75916): Guest Log: 00:00:00.000277 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-27 08:20:20 (75916): Guest Log: 00:00:00.000292 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-27 08:20:20 (75916): Guest Log: 00:00:00.000293 main     Process ID: 1247
2025-07-27 08:20:20 (75916): Guest Log: 00:00:00.000293 main     Package type: LINUX_64BITS_GENERIC
2025-07-27 08:20:20 (75916): Guest Log: 00:00:00.001187 main     5.2.32 r132073 started. Verbose level = 0
2025-07-27 08:20:21 (75916): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-27 08:20:21 (75916): Guest Log: [INFO] Mounting shared directory
2025-07-27 08:20:21 (75916): Guest Log: [INFO] Checking for init_data.xml
2025-07-27 08:20:25 (75916): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-27 08:20:25 (75916): Guest Log: [INFO] Detected branch: prod
2025-07-27 08:20:25 (75916): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-27 08:20:25 (75916): Guest Log: Copying input files
2025-07-27 08:20:26 (75916): Guest Log: Copied input files into RunAtlas.
2025-07-27 08:20:26 (75916): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-07-27 08:20:30 (75916): Guest Log: 00:00:10.013591 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 415 049 000ns (GuestNow=1 753 597 230 539 723 000 ns GuestLast=1 753 604 418 954 772 000 ns fSetTimeLastLoop=true )
2025-07-27 08:20:36 (75916): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-27 08:20:36 (75916): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-27 08:20:36 (75916): Guest Log: 2.6.3.0 1517 0 29508 148803 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-07-27 08:20:36 (75916): Guest Log: copied the webapp to /var/www
2025-07-27 08:20:36 (75916): Guest Log: core_number=1
2025-07-27 08:20:37 (75916): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-27 08:20:37 (75916): Guest Log:  *** Starting ATLAS job. (PandaID=6745939208 taskID=45758350) ***
2025-07-27 10:00:11 (75916): Status Report: Elapsed Time: '6000.000000'
2025-07-27 10:00:11 (75916): Status Report: CPU Time: '5774.171875'
2025-07-27 11:40:14 (75916): Status Report: Elapsed Time: '12000.000000'
2025-07-27 11:40:14 (75916): Status Report: CPU Time: '11748.906250'
2025-07-27 13:20:16 (75916): Status Report: Elapsed Time: '18000.000000'
2025-07-27 13:20:16 (75916): Status Report: CPU Time: '17723.984375'
2025-07-27 15:00:19 (75916): Status Report: Elapsed Time: '24000.000000'
2025-07-27 15:00:19 (75916): Status Report: CPU Time: '23699.968750'
2025-07-27 16:40:22 (75916): Status Report: Elapsed Time: '30000.000000'
2025-07-27 16:40:22 (75916): Status Report: CPU Time: '29676.187500'
2025-07-27 17:18:31 (75916): Guest Log:  *** Job finished ***
2025-07-27 17:18:31 (75916): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-27 17:18:31 (75916): Guest Log: 2025-07-27 15:17:58,031 | INFO     | all workflow threads have been joined
2025-07-27 17:18:31 (75916): Guest Log: 2025-07-27 15:17:58,031 | INFO     | end of generic workflow (traces error code: 0)
2025-07-27 17:18:31 (75916): Guest Log: 2025-07-27 15:17:58,031 | INFO     | traces error code: 0
2025-07-27 17:18:31 (75916): Guest Log: 2025-07-27 15:17:58,031 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-27 17:18:31 (75916): Guest Log: 2025-07-27 15:18:17,806 | INFO     | PID=5761 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-27 17:18:31 (75916): Guest Log: 2025-07-27 15:18:17,807 | INFO     | found 0 job(s) in 20 queues
2025-07-27 17:18:31 (75916): Guest Log: 2025-07-27 15:18:17,807 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-27 17:18:31 (75916): Guest Log: 2025-07-27 15:18:17,807 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-27 17:18:31 (75916): Guest Log: 2025-07-27 15:18:17,807 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-27 17:18:31 (75916): Guest Log: 2025-07-27 15:18:17,807 | INFO     | [monitor] control thread has ended
2025-07-27 17:18:31 (75916): Guest Log: 2025-07-27 15:18:17,912 [wrapper] ==== pilot stdout END ====
2025-07-27 17:18:31 (75916): Guest Log: 2025-07-27 15:18:17,914 [wrapper] ==== wrapper stdout RESUME ====
2025-07-27 17:18:31 (75916): Guest Log: 2025-07-27 15:18:17,916 [wrapper] pilotpid: 5761
2025-07-27 17:18:31 (75916): Guest Log: 2025-07-27 15:18:17,918 [wrapper] Pilot exit status: 0
2025-07-27 17:18:31 (75916): Guest Log: 2025-07-27 15:18:17,960 [wrapper] pandaids: 6745939208
2025-07-27 17:18:31 (75916): Guest Log: 2025-07-27 15:18:17,971 [wrapper] cleanup supervisor_pilot 10200 5762
2025-07-27 17:18:31 (75916): Guest Log: 2025-07-27 15:18:17,973 [wrapper] Test setup, not cleaning
2025-07-27 17:18:31 (75916): Guest Log: 2025-07-27 15:18:17,974 [wrapper] apfmon messages muted
2025-07-27 17:18:31 (75916): Guest Log: 2025-07-27 15:18:17,976 [wrapper] ==== wrapper stdout END ====
2025-07-27 17:18:31 (75916): Guest Log: 2025-07-27 15:18:17,978 [wrapper] ==== wrapper stderr END ====
2025-07-27 17:18:31 (75916): Guest Log:  *** Error codes and diagnostics ***
2025-07-27 17:18:31 (75916): Guest Log:     "exeErrorCode": 0,
2025-07-27 17:18:31 (75916): Guest Log:     "exeErrorDiag": "",
2025-07-27 17:18:31 (75916): Guest Log:     "pilotErrorCode": 0,
2025-07-27 17:18:31 (75916): Guest Log:     "pilotErrorDiag": "",
2025-07-27 17:18:31 (75916): Guest Log:  *** Listing of results directory ***
2025-07-27 17:18:31 (75916): Guest Log: total 182564
2025-07-27 17:18:31 (75916): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 27 01:08 queuedata.json
2025-07-27 17:18:31 (75916): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 27 01:08 pilot3.tar.gz
2025-07-27 17:18:31 (75916): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 27 01:10 runpilot2-wrapper.sh
2025-07-27 17:18:31 (75916): Guest Log: -rwxr-xr-x. 1 atlas atlas      9452 Jul 27 06:20 init_data.xml
2025-07-27 17:18:31 (75916): Guest Log: -rwxr-xr-x. 1 atlas atlas    542891 Jul 27 06:20 input.tar.gz
2025-07-27 17:18:31 (75916): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 27 06:20 start_atlas.sh
2025-07-27 17:18:31 (75916): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 27 06:20 EVNT.45758348._000001.pool.root.1 -> /data/./ATLAS.root_0
2025-07-27 17:18:31 (75916): Guest Log: -rw-r--r--. 1 atlas atlas      2576 Jul 27 06:20 pandaJob.out
2025-07-27 17:18:31 (75916): Guest Log: -rw-------. 1 atlas atlas    980125 Jul 27 06:20 agis_schedconf.cvmfs.json
2025-07-27 17:18:31 (75916): Guest Log: drwx------. 4 atlas atlas      4096 Jul 27 06:20 pilot3
2025-07-27 17:18:31 (75916): Guest Log: -rw-------. 1 atlas atlas 176137500 Jul 27 15:17 HITS.45758350._000013.pool.root.1
2025-07-27 17:18:31 (75916): Guest Log: -rw-------. 1 atlas atlas      1022 Jul 27 15:17 memory_monitor_summary.json
2025-07-27 17:18:31 (75916): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 27 15:17 agis_ddmendpoints.agis.ALL.json
2025-07-27 17:18:31 (75916): Guest Log: -rw-------. 1 atlas atlas    458741 Jul 27 15:17 log.45758350._000013.job.log.tgz.1
2025-07-27 17:18:31 (75916): Guest Log: -rw-------. 1 atlas atlas        95 Jul 27 15:17 pilot_heartbeat.json
2025-07-27 17:18:31 (75916): Guest Log: -rw-------. 1 atlas atlas      7757 Jul 27 15:17 heartbeat.json
2025-07-27 17:18:31 (75916): Guest Log: -rw-------. 1 atlas atlas       744 Jul 27 15:18 pilotlog.txt
2025-07-27 17:18:31 (75916): Guest Log: -rw-------. 1 atlas atlas   3042693 Jul 27 15:18 log.45758350._000013.job.log.1
2025-07-27 17:18:31 (75916): Guest Log: -rw-------. 1 atlas atlas       357 Jul 27 15:18 output.list
2025-07-27 17:18:31 (75916): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 27 15:18 runtime_log
2025-07-27 17:18:31 (75916): Guest Log: -rw-------. 1 atlas atlas   3522560 Jul 27 15:18 result.tar.gz
2025-07-27 17:18:31 (75916): Guest Log: -rw-r--r--. 1 atlas atlas      8466 Jul 27 15:18 runtime_log.err
2025-07-27 17:18:31 (75916): Guest Log: -rw-------. 1 atlas atlas       657 Jul 27 15:18 el5KDm744z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4lTLDmJDypPo.diag
2025-07-27 17:18:31 (75916): Guest Log: Looking for outputfile HITS.45758350._000013.pool.root.1
2025-07-27 17:18:31 (75916): Guest Log: HITS file was successfully produced
2025-07-27 17:18:31 (75916): Guest Log: -rw-------. 1 atlas atlas 176137500 Jul 27 15:17 /home/atlas/RunAtlas/HITS.45758350._000013.pool.root.1
2025-07-27 17:18:31 (75916): Guest Log: Successfully finished the ATLAS job!
2025-07-27 17:18:31 (75916): Guest Log: Copying the results back to the shared directory!
2025-07-27 17:18:31 (75916): Guest Log:  *** Contents of shared directory: ***
2025-07-27 17:18:31 (75916): Guest Log: total 411700
2025-07-27 17:18:31 (75916): Guest Log: -rwxrwxrwx. 1 root root 241344257 Jul 27 06:19 ATLAS.root_0
2025-07-27 17:18:31 (75916): Guest Log: -rwxrwxrwx. 1 root root 176137500 Jul 27  2025 HITS.pool.root.1
2025-07-27 17:18:31 (75916): Guest Log: -rwxrwxrwx. 1 root root      9452 Jul 27 06:19 init_data.xml
2025-07-27 17:18:31 (75916): Guest Log: -rwxrwxrwx. 1 root root    542891 Jul 27 06:19 input.tar.gz
2025-07-27 17:18:31 (75916): Guest Log: -rwxrwxrwx. 1 root root   3522560 Jul 27  2025 result.tar.gz
2025-07-27 17:18:31 (75916): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 27 06:19 start_atlas.sh
2025-07-27 17:18:31 (75916): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-27 17:18:31 (75916): VM Completion File Detected.
2025-07-27 17:18:31 (75916): Powering off VM.
2025-07-27 17:18:31 (75916): Successfully stopped VM.
2025-07-27 17:18:31 (75916): Deregistering VM. (boinc_d00628fb7c36d67e, slot#34)
2025-07-27 17:18:31 (75916): Removing network bandwidth throttle group from VM.
2025-07-27 17:18:32 (75916): Removing VM from VirtualBox.
17:18:37 (75916): called boinc_finish(0)

</stderr_txt>
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