Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:23:07 (2537527): wrapper (7.7.26015): starting
02:23:07 (2537527): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 02:23:07] Arguments: --nthreads 8
[2025-07-27 02:23:07] Threads: 8
[2025-07-27 02:23:07] Checking for CVMFS
[2025-07-27 02:23:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 02:23:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 02:23:07] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 02:23:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 02:23:08] 2.12.6.0 126724 13796 363636 148803 3 109 27850322 32935937 19791 16776704 2 44447289 99.663 71393507 11565 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 02:23:08] CVMFS is ok
[2025-07-27 02:23:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 02:23:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 02:23:08] Further information can be found at the LHC@home message board.
[2025-07-27 02:23:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 02:23:08] Checking for apptainer binary...
[2025-07-27 02:23:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 02:23:08] Running /usr/bin/apptainer --version
[2025-07-27 02:23:08] apptainer version 1.4.1-1.el9
[2025-07-27 02:23:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 02:23:08] c6-12-27-3.aglt2.org
[2025-07-27 02:23:08] apptainer works
[2025-07-27 02:23:08] Set ATHENA_PROC_NUMBER=8
[2025-07-27 02:23:08] Set ATHENA_CORE_NUMBER=8
[2025-07-27 02:23:08] Starting ATLAS job with PandaID=6745939032
[2025-07-27 02:23:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 04:39:52]  *** The last 200 lines of the pilot log: ***
[2025-07-27 04:39:52] 2025-07-27 08:39:14,486 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 04:39:52] 2025-07-27 08:39:16,270 | INFO     | 8156s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-27 04:39:52] 2025-07-27 08:39:16,989 | INFO     | monitor loop #594: job 0:6745939032 is in state 'finished'
[2025-07-27 04:39:52] 2025-07-27 08:39:16,989 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 04:39:52] 2025-07-27 08:39:18,345 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 04:39:52] 2025-07-27 08:39:18,370 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2668.3399999999992
[2025-07-27 04:39:52] 2025-07-27 08:39:18,402 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6745939032/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 04:39:52] 2025-07-27 08:39:18,403 | INFO     | extracted standard info from prmon json
[2025-07-27 04:39:52] 2025-07-27 08:39:18,403 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 04:39:52] 2025-07-27 08:39:18,403 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 04:39:52] 2025-07-27 08:39:18,404 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 04:39:52] 2025-07-27 08:39:18,404 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 04:39:52] 2025-07-27 08:39:18,407 | INFO     | fitting pss+swap vs Time
[2025-07-27 04:39:52] 2025-07-27 08:39:18,407 | INFO     | sum of square deviations: 729472282.0
[2025-07-27 04:39:52] 2025-07-27 08:39:18,408 | INFO     | sum of deviations: -11549384308.999996
[2025-07-27 04:39:52] 2025-07-27 08:39:18,408 | INFO     | mean x: 1753601461.0
[2025-07-27 04:39:52] 2025-07-27 08:39:18,408 | INFO     | mean y: 2245558.947368421
[2025-07-27 04:39:52] 2025-07-27 08:39:18,408 | INFO     | -- intersect: 27766175317.02537
[2025-07-27 04:39:52] 2025-07-27 08:39:18,408 | INFO     | intersect: 27766175317.02537
[2025-07-27 04:39:52] 2025-07-27 08:39:18,408 | INFO     | chi2: 2.087729651535
[2025-07-27 04:39:52] 2025-07-27 08:39:18,409 | INFO     | sum of square deviations: 650252192.0
[2025-07-27 04:39:52] 2025-07-27 08:39:18,409 | INFO     | sum of deviations: -10119282436.0
[2025-07-27 04:39:52] 2025-07-27 08:39:18,409 | INFO     | mean x: 1753601308.5
[2025-07-27 04:39:52] 2025-07-27 08:39:18,409 | INFO     | mean y: 2248303.640625
[2025-07-27 04:39:52] 2025-07-27 08:39:18,410 | INFO     | -- intersect: 27291947806.64617
[2025-07-27 04:39:52] 2025-07-27 08:39:18,410 | INFO     | intersect: 27291947806.64617
[2025-07-27 04:39:52] 2025-07-27 08:39:18,410 | INFO     | chi2: 2.088367343176059
[2025-07-27 04:39:52] 2025-07-27 08:39:18,410 | INFO     | current chi2=2.088367343176059 (change=-0.030544742255780414 %)
[2025-07-27 04:39:52] 2025-07-27 08:39:18,410 | INFO     | right removable region: 127
[2025-07-27 04:39:52] 2025-07-27 08:39:18,410 | INFO     | sum of square deviations: 650252192.0
[2025-07-27 04:39:52] 2025-07-27 08:39:18,411 | INFO     | sum of deviations: -32765612681.5
[2025-07-27 04:39:52] 2025-07-27 08:39:18,411 | INFO     | mean x: 1753601613.5
[2025-07-27 04:39:52] 2025-07-27 08:39:18,411 | INFO     | mean y: 2285905.3671875
[2025-07-27 04:39:52] 2025-07-27 08:39:18,411 | INFO     | -- intersect: 88364665875.00589
[2025-07-27 04:39:52] 2025-07-27 08:39:18,411 | INFO     | intersect: 88364665875.00589
[2025-07-27 04:39:52] 2025-07-27 08:39:18,411 | INFO     | chi2: 0.32909235856533836
[2025-07-27 04:39:52] 2025-07-27 08:39:18,411 | INFO     | current chi2=0.32909235856533836 (change=84.23683074466209 %)
[2025-07-27 04:39:52] 2025-07-27 08:39:18,412 | INFO     | sum of square deviations: 576985702.0
[2025-07-27 04:39:52] 2025-07-27 08:39:18,412 | INFO     | sum of deviations: -32784698880.0
[2025-07-27 04:39:52] 2025-07-27 08:39:18,412 | INFO     | mean x: 1753601766.0
[2025-07-27 04:39:52] 2025-07-27 08:39:18,412 | INFO     | mean y: 2285772.699186992
[2025-07-27 04:39:52] 2025-07-27 08:39:18,413 | INFO     | -- intersect: 99643066565.81877
[2025-07-27 04:39:52] 2025-07-27 08:39:18,413 | INFO     | intersect: 99643066565.81877
[2025-07-27 04:39:52] 2025-07-27 08:39:18,413 | INFO     | chi2: 0.2550498525012699
[2025-07-27 04:39:52] 2025-07-27 08:39:18,413 | INFO     | current chi2=0.2550498525012699 (change=22.499004956193172 %)
[2025-07-27 04:39:52] 2025-07-27 08:39:18,413 | INFO     | left removable region: 20
[2025-07-27 04:39:52] 2025-07-27 08:39:18,413 | INFO     | sum of square deviations: 379832238.0
[2025-07-27 04:39:52] 2025-07-27 08:39:18,414 | INFO     | sum of deviations: -23464765202.0
[2025-07-27 04:39:52] 2025-07-27 08:39:18,414 | INFO     | mean x: 1753601888.0
[2025-07-27 04:39:52] 2025-07-27 08:39:18,414 | INFO     | mean y: 2273951.6355140186
[2025-07-27 04:39:52] 2025-07-27 08:39:18,414 | INFO     | -- intersect: 108333933150.3576
[2025-07-27 04:39:52] 2025-07-27 08:39:18,414 | INFO     | intersect: 108333933150.3576
[2025-07-27 04:39:52] 2025-07-27 08:39:18,414 | INFO     | chi2: 0.24111019600233521
[2025-07-27 04:39:52] 2025-07-27 08:39:18,414 | INFO     | -- intersect: 108333933150.3576
[2025-07-27 04:39:52] 2025-07-27 08:39:18,414 | INFO     | current memory leak: -61.78 B/s (using 107 data points, chi2=0.24)
[2025-07-27 04:39:52] 2025-07-27 08:39:18,415 | INFO     | could have reported an average CPU frequency of 2661 MHz (8 samples)
[2025-07-27 04:39:52] 2025-07-27 08:39:18,415 | INFO     | ..............................
[2025-07-27 04:39:52] 2025-07-27 08:39:18,415 | INFO     | . Timing measurements:
[2025-07-27 04:39:52] 2025-07-27 08:39:18,415 | INFO     | . get job = 0 s
[2025-07-27 04:39:52] 2025-07-27 08:39:18,415 | INFO     | . initial setup = 3 s
[2025-07-27 04:39:52] 2025-07-27 08:39:18,415 | INFO     | . payload setup = 9 s
[2025-07-27 04:39:52] 2025-07-27 08:39:18,415 | INFO     | . stage-in = 0 s
[2025-07-27 04:39:52] 2025-07-27 08:39:18,415 | INFO     | . payload execution = 8116 s
[2025-07-27 04:39:52] 2025-07-27 08:39:18,416 | INFO     | . stage-out = 0 s
[2025-07-27 04:39:52] 2025-07-27 08:39:18,416 | INFO     | . log creation = 0 s
[2025-07-27 04:39:52] 2025-07-27 08:39:18,416 | INFO     | ..............................
[2025-07-27 04:39:52] 2025-07-27 08:39:18,508 | INFO     | 
[2025-07-27 04:39:52] 2025-07-27 08:39:18,508 | INFO     | job summary report
[2025-07-27 04:39:52] 2025-07-27 08:39:18,508 | INFO     | --------------------------------------------------
[2025-07-27 04:39:52] 2025-07-27 08:39:18,508 | INFO     | PanDA job id: 6745939032
[2025-07-27 04:39:52] 2025-07-27 08:39:18,509 | INFO     | task id: 45758392
[2025-07-27 04:39:52] 2025-07-27 08:39:18,509 | INFO     | errors: (none)
[2025-07-27 04:39:52] 2025-07-27 08:39:18,509 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 04:39:52] 2025-07-27 08:39:18,509 | INFO     | pilot state: finished 
[2025-07-27 04:39:52] 2025-07-27 08:39:18,509 | INFO     | transexitcode: 0
[2025-07-27 04:39:52] 2025-07-27 08:39:18,509 | INFO     | exeerrorcode: 0
[2025-07-27 04:39:52] 2025-07-27 08:39:18,509 | INFO     | exeerrordiag: 
[2025-07-27 04:39:52] 2025-07-27 08:39:18,509 | INFO     | exitcode: 0
[2025-07-27 04:39:52] 2025-07-27 08:39:18,509 | INFO     | exitmsg: OK
[2025-07-27 04:39:52] 2025-07-27 08:39:18,509 | INFO     | cpuconsumptiontime: 60823 s
[2025-07-27 04:39:52] 2025-07-27 08:39:18,509 | INFO     | nevents: 400
[2025-07-27 04:39:52] 2025-07-27 08:39:18,509 | INFO     | neventsw: 0
[2025-07-27 04:39:52] 2025-07-27 08:39:18,509 | INFO     | pid: 2548547
[2025-07-27 04:39:52] 2025-07-27 08:39:18,509 | INFO     | pgrp: 2548547
[2025-07-27 04:39:52] 2025-07-27 08:39:18,509 | INFO     | corecount: 8
[2025-07-27 04:39:52] 2025-07-27 08:39:18,510 | INFO     | event service: False
[2025-07-27 04:39:52] 2025-07-27 08:39:18,510 | INFO     | sizes: {0: 2397464, 6: 2397726, 11: 2397754, 8128: 2425375, 8129: 2425374, 8130: 2434428, 8131: 2434612, 8138: 2434806}
[2025-07-27 04:39:52] 2025-07-27 08:39:18,510 | INFO     | --------------------------------------------------
[2025-07-27 04:39:52] 2025-07-27 08:39:18,510 | INFO     | 
[2025-07-27 04:39:52] 2025-07-27 08:39:18,510 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-27 04:39:52] 2025-07-27 08:39:18,535 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 04:39:52] 2025-07-27 08:39:18,535 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 04:39:52] 2025-07-27 08:39:18,535 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 04:39:52] 2025-07-27 08:39:18,535 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 04:39:52] 2025-07-27 08:39:18,535 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 04:39:52] 2025-07-27 08:39:18,535 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 04:39:52] 2025-07-27 08:39:18,535 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 04:39:52] 2025-07-27 08:39:18,536 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 04:39:52] 2025-07-27 08:39:18,536 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 04:39:52] 2025-07-27 08:39:18,536 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 04:39:52] 2025-07-27 08:39:18,536 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 04:39:52] 2025-07-27 08:39:18,536 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 04:39:52] 2025-07-27 08:39:18,536 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 04:39:52] 2025-07-27 08:39:18,536 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 04:39:52] 2025-07-27 08:39:18,536 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 04:39:52] 2025-07-27 08:39:18,536 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 04:39:52] 2025-07-27 08:39:18,536 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 04:39:52] 2025-07-27 08:39:18,536 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 04:39:52] 2025-07-27 08:39:18,536 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 04:39:52] 2025-07-27 08:39:18,536 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 04:39:52] 2025-07-27 08:39:18,537 | INFO     | job 6745939032 has completed (purged errors)
[2025-07-27 04:39:52] 2025-07-27 08:39:18,537 | INFO     | overall cleanup function is called
[2025-07-27 04:39:52] 2025-07-27 08:39:19,544 | INFO     | --- collectZombieJob: --- 10, [2548547]
[2025-07-27 04:39:52] 2025-07-27 08:39:19,544 | INFO     | zombie collector waiting for pid 2548547
[2025-07-27 04:39:52] 2025-07-27 08:39:19,544 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 04:39:52] 2025-07-27 08:39:19,544 | INFO     | collected zombie processes
[2025-07-27 04:39:52] 2025-07-27 08:39:19,544 | INFO     | will attempt to kill all subprocesses of pid=2548547
[2025-07-27 04:39:52] 2025-07-27 08:39:19,929 | INFO     | process IDs to be killed: [2548547] (in reverse order)
[2025-07-27 04:39:52] 2025-07-27 08:39:20,062 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 04:39:52] 2025-07-27 08:39:20,063 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 04:39:52] 2025-07-27 08:39:20,081 | INFO     | did not find any defunct processes belonging to 2548547
[2025-07-27 04:39:52] 2025-07-27 08:39:20,097 | INFO     | did not find any defunct processes belonging to 2548547
[2025-07-27 04:39:52] 2025-07-27 08:39:20,098 | INFO     | ready for new job
[2025-07-27 04:39:52] 2025-07-27 08:39:20,098 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 04:39:52] 2025-07-27 08:39:20,100 | INFO     | ***************************************
[2025-07-27 04:39:52] 2025-07-27 08:39:20,100 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 04:39:52] 2025-07-27 08:39:20,100 | INFO     | ***************************************
[2025-07-27 04:39:52] 2025-07-27 08:39:20,100 | INFO     | 
[2025-07-27 04:39:52] 2025-07-27 08:39:20,117 | INFO     | architecture information:
[2025-07-27 04:39:52] 2025-07-27 08:39:20,118 | INFO     | executing command: cat /etc/os-release
[2025-07-27 04:39:52] 2025-07-27 08:39:20,138 | INFO     | cat /etc/os-release:
[2025-07-27 04:39:52] NAME="CentOS Linux"
[2025-07-27 04:39:52] VERSION="7 (Core)"
[2025-07-27 04:39:52] ID="centos"
[2025-07-27 04:39:52] ID_LIKE="rhel fedora"
[2025-07-27 04:39:52] VERSION_ID="7"
[2025-07-27 04:39:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 04:39:52] ANSI_COLOR="0;31"
[2025-07-27 04:39:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 04:39:52] HOME_URL="https://www.centos.org/"
[2025-07-27 04:39:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 04:39:52] 
[2025-07-27 04:39:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 04:39:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 04:39:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 04:39:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 04:39:52] 
[2025-07-27 04:39:52] 2025-07-27 08:39:20,139 | INFO     | ***************************************
[2025-07-27 04:39:52] 2025-07-27 08:39:20,641 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-27 04:39:52] 2025-07-27 08:39:20,663 | INFO     | sufficient remaining disk space (95500107776 B)
[2025-07-27 04:39:52] 2025-07-27 08:39:20,663 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 04:39:52] 2025-07-27 08:39:20,663 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 04:39:52] 2025-07-27 08:39:20,663 | INFO     | update_server=False
[2025-07-27 04:39:52] 2025-07-27 08:39:20,663 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 04:39:52] 2025-07-27 08:39:20,664 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 04:39:52] 2025-07-27 08:39:20,664 | INFO     | aborting loop
[2025-07-27 04:39:52] 2025-07-27 08:39:20,680 | INFO     | all payload control threads have been joined
[2025-07-27 04:39:52] 2025-07-27 08:39:20,729 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 04:39:52] 2025-07-27 08:39:20,858 | INFO     | all data control threads have been joined
[2025-07-27 04:39:52] 2025-07-27 08:39:21,384 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 04:39:52] 2025-07-27 08:39:21,626 | INFO     | all job control threads have been joined
[2025-07-27 04:39:52] 2025-07-27 08:39:21,668 | INFO     | [job] retrieve thread has finished
[2025-07-27 04:39:52] 2025-07-27 08:39:21,669 | INFO     | [job] job monitor thread has finished
[2025-07-27 04:39:52] 2025-07-27 08:39:21,687 | INFO     | [payload] control thread has finished
[2025-07-27 04:39:52] 2025-07-27 08:39:21,820 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 04:39:52] 2025-07-27 08:39:21,863 | INFO     | [data] control thread has finished
[2025-07-27 04:39:52] 2025-07-27 08:39:22,501 | INFO     | [payload] validate_post thread has finished
[2025-07-27 04:39:52] 2025-07-27 08:39:22,631 | INFO     | [job] control thread has finished
[2025-07-27 04:39:52] 2025-07-27 08:39:22,735 | INFO     | [data] copytool_out thread has finished
[2025-07-27 04:39:52] 2025-07-27 08:39:22,832 | INFO     | [data] copytool_in thread has finished
[2025-07-27 04:39:52] 2025-07-27 08:39:22,907 | INFO     | [payload] failed_post thread has finished
[2025-07-27 04:39:52] 2025-07-27 08:39:22,912 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 04:39:52] 2025-07-27 08:39:23,064 | INFO     | [job] validate thread has finished
[2025-07-27 04:39:52] 2025-07-27 08:39:23,121 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 04:39:52] 2025-07-27 08:39:23,158 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 04:39:52] 2025-07-27 08:39:23,520 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 04:39:52] 2025-07-27 08:39:24,525 | INFO     | [job] queue monitor thread has finished
[2025-07-27 04:39:52] 2025-07-27 08:39:25,390 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 04:39:52] 2025-07-27 08:39:26,015 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140717249492800)>', '<ExcThread(monitor, started 140716609103616)>']
[2025-07-27 04:39:52] 2025-07-27 08:39:31,040 | INFO     | all workflow threads have been joined
[2025-07-27 04:39:52] 2025-07-27 08:39:31,041 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 04:39:52] 2025-07-27 08:39:31,041 | INFO     | traces error code: 0
[2025-07-27 04:39:52] 2025-07-27 08:39:31,042 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 04:39:52] 2025-07-27 08:39:51,821 | INFO     | PID=2542100 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 04:39:52] 2025-07-27 08:39:51,822 | INFO     | .. there are 26 such processes running
[2025-07-27 04:39:52] 2025-07-27 08:39:51,823 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 04:39:52] 2025-07-27 08:39:51,823 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 04:39:52] 2025-07-27 08:39:51,823 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 04:39:52] 2025-07-27 08:39:51,823 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 04:39:52] 2025-07-27 08:39:51,823 | INFO     | [monitor] control thread has ended
[2025-07-27 04:39:52] 2025-07-27 08:39:52,000 [wrapper] ==== pilot stdout END ====
[2025-07-27 04:39:52] 2025-07-27 08:39:52,004 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 04:39:52] 2025-07-27 08:39:52,008 [wrapper] pilotpid: 2542100
[2025-07-27 04:39:52] 2025-07-27 08:39:52,011 [wrapper] Pilot exit status: 0
[2025-07-27 04:39:52] 2025-07-27 08:39:52,028 [wrapper] pandaids: 6745939032
[2025-07-27 04:39:52] 2025-07-27 08:39:52,122 [wrapper] cleanup supervisor_pilot 3014364 2542101
[2025-07-27 04:39:52] 2025-07-27 08:39:52,127 [wrapper] Test setup, not cleaning
[2025-07-27 04:39:52] 2025-07-27 08:39:52,131 [wrapper] apfmon messages muted
[2025-07-27 04:39:52] 2025-07-27 08:39:52,134 [wrapper] ==== wrapper stdout END ====
[2025-07-27 04:39:52] 2025-07-27 08:39:52,138 [wrapper] ==== wrapper stderr END ====
[2025-07-27 04:39:52]  *** Error codes and diagnostics ***
[2025-07-27 04:39:52]     "exeErrorCode": 0,
[2025-07-27 04:39:52]     "exeErrorDiag": "",
[2025-07-27 04:39:52]     "pilotErrorCode": 0,
[2025-07-27 04:39:52]     "pilotErrorDiag": "",
[2025-07-27 04:39:52]  *** Listing of results directory ***
[2025-07-27 04:39:52] total 415264
[2025-07-27 04:39:52] -rwx------. 1 boincer umatlas     36292 Jul 26 21:08 runpilot2-wrapper.sh
[2025-07-27 04:39:52] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 21:08 queuedata.json
[2025-07-27 04:39:52] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 21:08 pilot3.tar.gz
[2025-07-27 04:39:52] -rw-r--r--. 1 boincer umatlas       100 Jul 27 02:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 04:39:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 02:23 run_atlas
[2025-07-27 04:39:52] -rw-r--r--. 1 boincer umatlas       105 Jul 27 02:23 job.xml
[2025-07-27 04:39:52] -rw-r--r--. 2 boincer umatlas 244542198 Jul 27 02:23 EVNT.45758390._000004.pool.root.1
[2025-07-27 04:39:52] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 02:23 shared
[2025-07-27 04:39:52] -rw-r--r--. 2 boincer umatlas    542871 Jul 27 02:23 input.tar.gz
[2025-07-27 04:39:52] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 02:23 start_atlas.sh
[2025-07-27 04:39:52] -rw-r--r--. 1 boincer umatlas         0 Jul 27 02:23 boinc_lockfile
[2025-07-27 04:39:52] -rw-r--r--. 1 boincer umatlas      2557 Jul 27 02:23 pandaJob.out
[2025-07-27 04:39:52] -rw-------. 1 boincer umatlas    980125 Jul 27 02:23 agis_schedconf.cvmfs.json
[2025-07-27 04:39:52] -rw-------. 1 boincer umatlas   1593052 Jul 27 02:23 agis_ddmendpoints.agis.ALL.json
[2025-07-27 04:39:52] drwx------. 4 boincer umatlas      4096 Jul 27 02:23 pilot3
[2025-07-27 04:39:52] -rw-r--r--. 1 boincer umatlas      6856 Jul 27 04:37 init_data.xml
[2025-07-27 04:39:52] -rw-------. 1 boincer umatlas 174614705 Jul 27 04:38 HITS.45758392._000085.pool.root.1
[2025-07-27 04:39:52] -rw-r--r--. 1 boincer umatlas       529 Jul 27 04:38 boinc_task_state.xml
[2025-07-27 04:39:52] -rw-------. 1 boincer umatlas      1046 Jul 27 04:39 memory_monitor_summary.json
[2025-07-27 04:39:52] -rw-------. 1 boincer umatlas    337218 Jul 27 04:39 log.45758392._000085.job.log.tgz.1
[2025-07-27 04:39:52] -rw-------. 1 boincer umatlas      7819 Jul 27 04:39 heartbeat.json
[2025-07-27 04:39:52] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 04:39 boinc_mmap_file
[2025-07-27 04:39:52] -rw-r--r--. 1 boincer umatlas        27 Jul 27 04:39 wrapper_checkpoint.txt
[2025-07-27 04:39:52] -rw-------. 1 boincer umatlas        95 Jul 27 04:39 pilot_heartbeat.json
[2025-07-27 04:39:52] -rw-------. 1 boincer umatlas       823 Jul 27 04:39 pilotlog.txt
[2025-07-27 04:39:52] -rw-------. 1 boincer umatlas    764713 Jul 27 04:39 log.45758392._000085.job.log.1
[2025-07-27 04:39:52] -rw-------. 1 boincer umatlas       357 Jul 27 04:39 output.list
[2025-07-27 04:39:52] -rw-r--r--. 1 boincer umatlas       620 Jul 27 04:39 runtime_log
[2025-07-27 04:39:52] -rw-------. 1 boincer umatlas   1116160 Jul 27 04:39 result.tar.gz
[2025-07-27 04:39:52] -rw-r--r--. 1 boincer umatlas      8670 Jul 27 04:39 runtime_log.err
[2025-07-27 04:39:52] -rw-------. 1 boincer umatlas       655 Jul 27 04:39 J9QKDmv34z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmslTLDmwI255m.diag
[2025-07-27 04:39:52] -rw-r--r--. 1 boincer umatlas     21180 Jul 27 04:39 stderr.txt
[2025-07-27 04:39:52] HITS file was successfully produced:
[2025-07-27 04:39:52] -rw-------. 1 boincer umatlas 174614705 Jul 27 04:38 shared/HITS.pool.root.1
[2025-07-27 04:39:52]  *** Contents of shared directory: ***
[2025-07-27 04:39:52] total 410980
[2025-07-27 04:39:52] -rw-r--r--. 2 boincer umatlas 244542198 Jul 27 02:23 ATLAS.root_0
[2025-07-27 04:39:52] -rw-r--r--. 2 boincer umatlas    542871 Jul 27 02:23 input.tar.gz
[2025-07-27 04:39:52] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 02:23 start_atlas.sh
[2025-07-27 04:39:52] -rw-------. 1 boincer umatlas 174614705 Jul 27 04:38 HITS.pool.root.1
[2025-07-27 04:39:52] -rw-------. 1 boincer umatlas   1116160 Jul 27 04:39 result.tar.gz
04:39:54 (2537527): run_atlas exited; CPU time 61114.871505
04:39:54 (2537527): called boinc_finish(0)

</stderr_txt>
]]>

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