Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:33:14 (546728): wrapper (7.7.26015): starting
07:33:14 (546728): wrapper: running run_atlas (--nthreads 4)
[2025-07-29 07:33:14] Arguments: --nthreads 4
[2025-07-29 07:33:14] Threads: 4
[2025-07-29 07:33:14] Checking for CVMFS
[2025-07-29 07:33:14] No cvmfs_config command found, will try listing directly
[2025-07-29 07:33:14] CVMFS is ok
[2025-07-29 07:33:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-29 07:33:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-29 07:33:14] Further information can be found at the LHC@home message board.
[2025-07-29 07:33:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-29 07:33:14] Checking for apptainer binary...
[2025-07-29 07:33:14] which: no apptainer in ((null))
[2025-07-29 07:33:14] apptainer is not installed, using version from CVMFS
[2025-07-29 07:33:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-29 07:33:14] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment ugluk10.grid.cesnet.cz
[2025-07-29 07:33:14] apptainer works
[2025-07-29 07:33:14] Set ATHENA_PROC_NUMBER=4
[2025-07-29 07:33:14] Set ATHENA_CORE_NUMBER=4
[2025-07-29 07:33:14] Starting ATLAS job with PandaID=6745835629
[2025-07-29 07:33:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-29 11:48:23]  *** The last 200 lines of the pilot log: ***
[2025-07-29 11:48:23] 2025-07-29 09:47:49,714 | INFO     | monitor loop #1129: job 0:6745835629 is in state 'finished'
[2025-07-29 11:48:23] 2025-07-29 09:47:49,715 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-29 11:48:23] 2025-07-29 09:47:51,217 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-29 11:48:23] 2025-07-29 09:47:51,224 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2612.6368437499996
[2025-07-29 11:48:23] 2025-07-29 09:47:51,230 | INFO     | using path: /scratch/boinc/var/slot16/slots/0/PanDA_Pilot-6745835629/memory_monitor_summary.json (trf name=prmon)
[2025-07-29 11:48:23] 2025-07-29 09:47:51,231 | INFO     | extracted standard info from prmon json
[2025-07-29 11:48:23] 2025-07-29 09:47:51,231 | INFO     | extracted standard memory fields from prmon json
[2025-07-29 11:48:23] 2025-07-29 09:47:51,231 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-29 11:48:23] 2025-07-29 09:47:51,231 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-29 11:48:23] 2025-07-29 09:47:51,232 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-29 11:48:23] 2025-07-29 09:47:51,237 | INFO     | fitting pss+swap vs Time
[2025-07-29 11:48:23] 2025-07-29 09:47:51,237 | INFO     | sum of square deviations: 4844974562.5
[2025-07-29 11:48:23] 2025-07-29 09:47:51,239 | INFO     | sum of deviations: 2097124063.0000005
[2025-07-29 11:48:23] 2025-07-29 09:47:51,239 | INFO     | mean x: 1753774822.5
[2025-07-29 11:48:23] 2025-07-29 09:47:51,240 | INFO     | mean y: 2347907.944
[2025-07-29 11:48:23] 2025-07-29 09:47:51,240 | INFO     | -- intersect: -756765134.6331569
[2025-07-29 11:48:23] 2025-07-29 09:47:51,240 | INFO     | intersect: -756765134.6331569
[2025-07-29 11:48:23] 2025-07-29 09:47:51,240 | INFO     | chi2: 1.5299092430180765
[2025-07-29 11:48:23] 2025-07-29 09:47:51,241 | INFO     | sum of square deviations: 4560048290.0
[2025-07-29 11:48:23] 2025-07-29 09:47:51,243 | INFO     | sum of deviations: 1976873848.0000021
[2025-07-29 11:48:23] 2025-07-29 09:47:51,243 | INFO     | mean x: 1753774670.0
[2025-07-29 11:48:23] 2025-07-29 09:47:51,243 | INFO     | mean y: 2347843.5755102043
[2025-07-29 11:48:23] 2025-07-29 09:47:51,243 | INFO     | -- intersect: -757949210.2979771
[2025-07-29 11:48:23] 2025-07-29 09:47:51,243 | INFO     | intersect: -757949210.2979771
[2025-07-29 11:48:23] 2025-07-29 09:47:51,244 | INFO     | chi2: 1.5299134705271524
[2025-07-29 11:48:23] 2025-07-29 09:47:51,244 | INFO     | current chi2=1.5299134705271524 (change=-0.00027632417381675346 %)
[2025-07-29 11:48:23] 2025-07-29 09:47:51,244 | INFO     | right removable region: 244
[2025-07-29 11:48:23] 2025-07-29 09:47:51,245 | INFO     | sum of square deviations: 4560048290.0
[2025-07-29 11:48:23] 2025-07-29 09:47:51,246 | INFO     | sum of deviations: -32386512840.0
[2025-07-29 11:48:23] 2025-07-29 09:47:51,247 | INFO     | mean x: 1753774975.0
[2025-07-29 11:48:23] 2025-07-29 09:47:51,247 | INFO     | mean y: 2366186.5428571426
[2025-07-29 11:48:23] 2025-07-29 09:47:51,247 | INFO     | -- intersect: 12458079840.028788
[2025-07-29 11:48:23] 2025-07-29 09:47:51,247 | INFO     | intersect: 12458079840.028788
[2025-07-29 11:48:23] 2025-07-29 09:47:51,247 | INFO     | chi2: 0.1052404638163095
[2025-07-29 11:48:23] 2025-07-29 09:47:51,248 | INFO     | current chi2=0.1052404638163095 (change=93.12113026987797 %)
[2025-07-29 11:48:23] 2025-07-29 09:47:51,248 | INFO     | sum of square deviations: 4286517580.0
[2025-07-29 11:48:23] 2025-07-29 09:47:51,250 | INFO     | sum of deviations: -30713926847.5
[2025-07-29 11:48:23] 2025-07-29 09:47:51,250 | INFO     | mean x: 1753775127.5
[2025-07-29 11:48:23] 2025-07-29 09:47:51,250 | INFO     | mean y: 2365238.8208333333
[2025-07-29 11:48:23] 2025-07-29 09:47:51,250 | INFO     | -- intersect: 12568584778.972582
[2025-07-29 11:48:23] 2025-07-29 09:47:51,250 | INFO     | intersect: 12568584778.972582
[2025-07-29 11:48:23] 2025-07-29 09:47:51,251 | INFO     | chi2: 0.10099651304569077
[2025-07-29 11:48:23] 2025-07-29 09:47:51,251 | INFO     | current chi2=0.10099651304569077 (change=4.032622640305231 %)
[2025-07-29 11:48:23] 2025-07-29 09:47:51,251 | INFO     | left removable region: 20
[2025-07-29 11:48:23] 2025-07-29 09:47:51,252 | INFO     | sum of square deviations: 3485088600.0
[2025-07-29 11:48:23] 2025-07-29 09:47:51,253 | INFO     | sum of deviations: -20888568519.5
[2025-07-29 11:48:23] 2025-07-29 09:47:51,254 | INFO     | mean x: 1753775249.5
[2025-07-29 11:48:23] 2025-07-29 09:47:51,254 | INFO     | mean y: 2359834.879464286
[2025-07-29 11:48:23] 2025-07-29 09:47:51,254 | INFO     | -- intersect: 10513959014.017681
[2025-07-29 11:48:23] 2025-07-29 09:47:51,254 | INFO     | intersect: 10513959014.017681
[2025-07-29 11:48:23] 2025-07-29 09:47:51,254 | INFO     | chi2: 0.0873161476097763
[2025-07-29 11:48:23] 2025-07-29 09:47:51,255 | INFO     | -- intersect: 10513959014.017681
[2025-07-29 11:48:23] 2025-07-29 09:47:51,255 | INFO     | current memory leak: -5.99 B/s (using 224 data points, chi2=0.09)
[2025-07-29 11:48:23] 2025-07-29 09:47:51,255 | INFO     | could have reported an average CPU frequency of 2595 MHz (12 samples)
[2025-07-29 11:48:23] 2025-07-29 09:47:51,255 | INFO     | ..............................
[2025-07-29 11:48:23] 2025-07-29 09:47:51,256 | INFO     | . Timing measurements:
[2025-07-29 11:48:23] 2025-07-29 09:47:51,256 | INFO     | . get job = 0 s
[2025-07-29 11:48:23] 2025-07-29 09:47:51,256 | INFO     | . initial setup = 1 s
[2025-07-29 11:48:23] 2025-07-29 09:47:51,256 | INFO     | . payload setup = 5 s
[2025-07-29 11:48:23] 2025-07-29 09:47:51,256 | INFO     | . stage-in = 0 s
[2025-07-29 11:48:23] 2025-07-29 09:47:51,256 | INFO     | . payload execution = 15237 s
[2025-07-29 11:48:23] 2025-07-29 09:47:51,256 | INFO     | . stage-out = 1 s
[2025-07-29 11:48:23] 2025-07-29 09:47:51,256 | INFO     | . log creation = 0 s
[2025-07-29 11:48:23] 2025-07-29 09:47:51,256 | INFO     | ..............................
[2025-07-29 11:48:23] 2025-07-29 09:47:51,676 | INFO     | 
[2025-07-29 11:48:23] 2025-07-29 09:47:51,676 | INFO     | job summary report
[2025-07-29 11:48:23] 2025-07-29 09:47:51,676 | INFO     | --------------------------------------------------
[2025-07-29 11:48:23] 2025-07-29 09:47:51,677 | INFO     | PanDA job id: 6745835629
[2025-07-29 11:48:23] 2025-07-29 09:47:51,677 | INFO     | task id: 45758324
[2025-07-29 11:48:23] 2025-07-29 09:47:51,677 | INFO     | errors: (none)
[2025-07-29 11:48:23] 2025-07-29 09:47:51,677 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-29 11:48:23] 2025-07-29 09:47:51,677 | INFO     | pilot state: finished 
[2025-07-29 11:48:23] 2025-07-29 09:47:51,677 | INFO     | transexitcode: 0
[2025-07-29 11:48:23] 2025-07-29 09:47:51,677 | INFO     | exeerrorcode: 0
[2025-07-29 11:48:23] 2025-07-29 09:47:51,677 | INFO     | exeerrordiag: 
[2025-07-29 11:48:23] 2025-07-29 09:47:51,678 | INFO     | exitcode: 0
[2025-07-29 11:48:23] 2025-07-29 09:47:51,678 | INFO     | exitmsg: OK
[2025-07-29 11:48:23] 2025-07-29 09:47:51,678 | INFO     | cpuconsumptiontime: 58854 s
[2025-07-29 11:48:23] 2025-07-29 09:47:51,678 | INFO     | nevents: 400
[2025-07-29 11:48:23] 2025-07-29 09:47:51,678 | INFO     | neventsw: 0
[2025-07-29 11:48:23] 2025-07-29 09:47:51,678 | INFO     | pid: 556979
[2025-07-29 11:48:23] 2025-07-29 09:47:51,678 | INFO     | pgrp: 556979
[2025-07-29 11:48:23] 2025-07-29 09:47:51,678 | INFO     | corecount: 4
[2025-07-29 11:48:23] 2025-07-29 09:47:51,678 | INFO     | event service: False
[2025-07-29 11:48:23] 2025-07-29 09:47:51,679 | INFO     | sizes: {0: 2391902, 4: 2392164, 11: 2392192, 15244: 2423384, 15245: 2423383, 15247: 2432459, 15250: 2432671, 15254: 2432865}
[2025-07-29 11:48:23] 2025-07-29 09:47:51,679 | INFO     | --------------------------------------------------
[2025-07-29 11:48:23] 2025-07-29 09:47:51,679 | INFO     | 
[2025-07-29 11:48:23] 2025-07-29 09:47:51,679 | INFO     | executing command: ls -lF /scratch/boinc/var/slot16/slots/0
[2025-07-29 11:48:23] 2025-07-29 09:47:51,699 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-29 11:48:23] 2025-07-29 09:47:51,700 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-29 11:48:23] 2025-07-29 09:47:51,700 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-29 11:48:23] 2025-07-29 09:47:51,700 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-29 11:48:23] 2025-07-29 09:47:51,700 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-29 11:48:23] 2025-07-29 09:47:51,700 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-29 11:48:23] 2025-07-29 09:47:51,700 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-29 11:48:23] 2025-07-29 09:47:51,701 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-29 11:48:23] 2025-07-29 09:47:51,701 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-29 11:48:23] 2025-07-29 09:47:51,701 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-29 11:48:23] 2025-07-29 09:47:51,701 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-29 11:48:23] 2025-07-29 09:47:51,701 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-29 11:48:23] 2025-07-29 09:47:51,701 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-29 11:48:23] 2025-07-29 09:47:51,701 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-29 11:48:23] 2025-07-29 09:47:51,701 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-29 11:48:23] 2025-07-29 09:47:51,702 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-29 11:48:23] 2025-07-29 09:47:51,702 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-29 11:48:23] 2025-07-29 09:47:51,702 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-29 11:48:23] 2025-07-29 09:47:51,702 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-29 11:48:23] 2025-07-29 09:47:51,702 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-29 11:48:23] 2025-07-29 09:47:51,702 | INFO     | job 6745835629 has completed (purged errors)
[2025-07-29 11:48:23] 2025-07-29 09:47:51,702 | INFO     | overall cleanup function is called
[2025-07-29 11:48:23] 2025-07-29 09:47:52,706 | INFO     | --- collectZombieJob: --- 10, [556979]
[2025-07-29 11:48:23] 2025-07-29 09:47:52,706 | INFO     | zombie collector waiting for pid 556979
[2025-07-29 11:48:23] 2025-07-29 09:47:52,706 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-29 11:48:23] 2025-07-29 09:47:52,706 | INFO     | collected zombie processes
[2025-07-29 11:48:23] 2025-07-29 09:47:52,706 | INFO     | will attempt to kill all subprocesses of pid=556979
[2025-07-29 11:48:23] 2025-07-29 09:47:52,943 | INFO     | process IDs to be killed: [556979] (in reverse order)
[2025-07-29 11:48:23] 2025-07-29 09:47:53,007 | WARNING  | found no corresponding commands to process id(s)
[2025-07-29 11:48:23] 2025-07-29 09:47:53,007 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-29 11:48:23] 2025-07-29 09:47:53,014 | INFO     | did not find any defunct processes belonging to 556979
[2025-07-29 11:48:23] 2025-07-29 09:47:53,020 | INFO     | did not find any defunct processes belonging to 556979
[2025-07-29 11:48:23] 2025-07-29 09:47:53,021 | INFO     | ready for new job
[2025-07-29 11:48:23] 2025-07-29 09:47:53,021 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-29 11:48:23] 2025-07-29 09:47:53,023 | INFO     | ***************************************
[2025-07-29 11:48:23] 2025-07-29 09:47:53,023 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-29 11:48:23] 2025-07-29 09:47:53,023 | INFO     | ***************************************
[2025-07-29 11:48:23] 2025-07-29 09:47:53,023 | INFO     | 
[2025-07-29 11:48:23] 2025-07-29 09:47:53,025 | INFO     | architecture information:
[2025-07-29 11:48:23] 2025-07-29 09:47:53,026 | INFO     | executing command: cat /etc/os-release
[2025-07-29 11:48:23] 2025-07-29 09:47:53,040 | INFO     | cat /etc/os-release:
[2025-07-29 11:48:23] NAME="CentOS Linux"
[2025-07-29 11:48:23] VERSION="7 (Core)"
[2025-07-29 11:48:23] ID="centos"
[2025-07-29 11:48:23] ID_LIKE="rhel fedora"
[2025-07-29 11:48:23] VERSION_ID="7"
[2025-07-29 11:48:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-29 11:48:23] ANSI_COLOR="0;31"
[2025-07-29 11:48:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-29 11:48:23] HOME_URL="https://www.centos.org/"
[2025-07-29 11:48:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-29 11:48:23] 
[2025-07-29 11:48:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-29 11:48:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-29 11:48:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-29 11:48:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-29 11:48:23] 
[2025-07-29 11:48:23] 2025-07-29 09:47:53,040 | INFO     | ***************************************
[2025-07-29 11:48:23] 2025-07-29 09:47:53,543 | INFO     | executing command: df -mP /scratch/boinc/var/slot16/slots/0
[2025-07-29 11:48:23] 2025-07-29 09:47:53,555 | INFO     | sufficient remaining disk space (3452247736320 B)
[2025-07-29 11:48:23] 2025-07-29 09:47:53,556 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-29 11:48:23] 2025-07-29 09:47:53,556 | INFO     | current server update state: UPDATING_FINAL
[2025-07-29 11:48:23] 2025-07-29 09:47:53,556 | INFO     | update_server=False
[2025-07-29 11:48:23] 2025-07-29 09:47:53,556 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-29 11:48:23] 2025-07-29 09:47:53,556 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-29 11:48:23] 2025-07-29 09:47:53,557 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-29 11:48:23] 2025-07-29 09:47:53,557 | INFO     | aborting loop
[2025-07-29 11:48:23] 2025-07-29 09:47:53,739 | INFO     | all data control threads have been joined
[2025-07-29 11:48:23] 2025-07-29 09:47:54,230 | INFO     | all payload control threads have been joined
[2025-07-29 11:48:23] 2025-07-29 09:47:54,441 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-29 11:48:23] 2025-07-29 09:47:54,561 | INFO     | [job] retrieve thread has finished
[2025-07-29 11:48:23] 2025-07-29 09:47:54,562 | INFO     | [job] job monitor thread has finished
[2025-07-29 11:48:23] 2025-07-29 09:47:54,674 | INFO     | [payload] execute_payloads thread has finished
[2025-07-29 11:48:23] 2025-07-29 09:47:54,744 | INFO     | [data] control thread has finished
[2025-07-29 11:48:23] 2025-07-29 09:47:54,786 | INFO     | all job control threads have been joined
[2025-07-29 11:48:23] 2025-07-29 09:47:54,816 | INFO     | [payload] validate_pre thread has finished
[2025-07-29 11:48:23] 2025-07-29 09:47:54,881 | INFO     | [data] copytool_in thread has finished
[2025-07-29 11:48:23] 2025-07-29 09:47:54,966 | INFO     | [job] create_data_payload thread has finished
[2025-07-29 11:48:23] 2025-07-29 09:47:55,235 | INFO     | [payload] control thread has finished
[2025-07-29 11:48:23] 2025-07-29 09:47:55,507 | INFO     | [job] validate thread has finished
[2025-07-29 11:48:23] 2025-07-29 09:47:55,644 | INFO     | [payload] validate_post thread has finished
[2025-07-29 11:48:23] 2025-07-29 09:47:55,788 | INFO     | [job] control thread has finished
[2025-07-29 11:48:23] 2025-07-29 09:47:55,879 | INFO     | [payload] failed_post thread has finished
[2025-07-29 11:48:23] 2025-07-29 09:47:56,379 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-29 11:48:23] 2025-07-29 09:47:56,444 | INFO     | [data] copytool_out thread has finished
[2025-07-29 11:48:23] 2025-07-29 09:47:57,387 | INFO     | [job] queue monitor thread has finished
[2025-07-29 11:48:23] 2025-07-29 09:47:57,563 | INFO     | [data] queue_monitor thread has finished
[2025-07-29 11:48:23] 2025-07-29 09:48:03,884 | INFO     | job.realtimelogging is not enabled
[2025-07-29 11:48:23] 2025-07-29 09:48:04,889 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-29 11:48:23] 2025-07-29 09:48:05,087 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22427893790528)>', '<ExcThread(monitor, started 22427044148992)>']
[2025-07-29 11:48:23] 2025-07-29 09:48:10,112 | INFO     | all workflow threads have been joined
[2025-07-29 11:48:23] 2025-07-29 09:48:10,112 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-29 11:48:23] 2025-07-29 09:48:10,112 | INFO     | traces error code: 0
[2025-07-29 11:48:23] 2025-07-29 09:48:10,113 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-29 11:48:23] 2025-07-29 09:48:20,572 [wrapper] supervise_pilot (15 min periods counter: 18)
[2025-07-29 11:48:23] 2025-07-29 09:48:23,653 | INFO     | PID=550278 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-29 11:48:23] 2025-07-29 09:48:23,653 | INFO     | .. there are 5 such processes running
[2025-07-29 11:48:23] 2025-07-29 09:48:23,653 | INFO     | found 0 job(s) in 20 queues
[2025-07-29 11:48:23] 2025-07-29 09:48:23,654 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-29 11:48:23] 2025-07-29 09:48:23,654 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-29 11:48:23] 2025-07-29 09:48:23,654 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-29 11:48:23] 2025-07-29 09:48:23,654 | INFO     | [monitor] control thread has ended
[2025-07-29 11:48:23] 2025-07-29 09:48:23,763 [wrapper] ==== pilot stdout END ====
[2025-07-29 11:48:23] 2025-07-29 09:48:23,765 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-29 11:48:23] 2025-07-29 09:48:23,767 [wrapper] pilotpid: 550278
[2025-07-29 11:48:23] 2025-07-29 09:48:23,770 [wrapper] Pilot exit status: 0
[2025-07-29 11:48:23] 2025-07-29 09:48:23,779 [wrapper] pandaids: 6745835629
[2025-07-29 11:48:23] 2025-07-29 09:48:23,820 [wrapper] cleanup supervisor_pilot  850187 550279
[2025-07-29 11:48:23] 2025-07-29 09:48:23,822 [wrapper] Test setup, not cleaning
[2025-07-29 11:48:23] 2025-07-29 09:48:23,825 [wrapper] apfmon messages muted
[2025-07-29 11:48:23] 2025-07-29 09:48:23,827 [wrapper] ==== wrapper stdout END ====
[2025-07-29 11:48:23] 2025-07-29 09:48:23,829 [wrapper] ==== wrapper stderr END ====
[2025-07-29 11:48:23]  *** Error codes and diagnostics ***
[2025-07-29 11:48:23]     "exeErrorCode": 0,
[2025-07-29 11:48:23]     "exeErrorDiag": "",
[2025-07-29 11:48:23]     "pilotErrorCode": 0,
[2025-07-29 11:48:23]     "pilotErrorDiag": "",
[2025-07-29 11:48:23]  *** Listing of results directory ***
[2025-07-29 11:48:23] total 419920
[2025-07-29 11:48:23] -rw-r--r-- 1 boinc boinc    530466 Jul 27 00:38 pilot3.tar.gz
[2025-07-29 11:48:23] -rwx------ 1 boinc boinc     36292 Jul 27 00:39 runpilot2-wrapper.sh
[2025-07-29 11:48:23] -rw-r--r-- 1 boinc boinc      5112 Jul 27 00:39 queuedata.json
[2025-07-29 11:48:23] -rw-r--r-- 1 boinc boinc       100 Jul 29 07:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-29 11:48:23] -rwxr-xr-x 1 boinc boinc      7986 Jul 29 07:33 run_atlas
[2025-07-29 11:48:23] -rw-r--r-- 1 boinc boinc       105 Jul 29 07:33 job.xml
[2025-07-29 11:48:23] -rw-r--r-- 2 boinc boinc 246454685 Jul 29 07:33 EVNT.45758322._000004.pool.root.1
[2025-07-29 11:48:23] -rw-r--r-- 2 boinc boinc    542871 Jul 29 07:33 input.tar.gz
[2025-07-29 11:48:23] -rw-r--r-- 1 boinc boinc      6416 Jul 29 07:33 init_data.xml
[2025-07-29 11:48:23] -rw-r--r-- 2 boinc boinc     15095 Jul 29 07:33 start_atlas.sh
[2025-07-29 11:48:23] drwxrwx--x 2 boinc boinc      4096 Jul 29 07:33 shared
[2025-07-29 11:48:23] -rw-r--r-- 1 boinc boinc         0 Jul 29 07:33 boinc_lockfile
[2025-07-29 11:48:23] -rw-r--r-- 1 boinc boinc      2551 Jul 29 07:33 pandaJob.out
[2025-07-29 11:48:23] -rw------- 1 boinc boinc    977332 Jul 29 07:33 agis_schedconf.cvmfs.json
[2025-07-29 11:48:23] drwx------ 4 boinc boinc      4096 Jul 29 07:33 pilot3
[2025-07-29 11:48:23] -rw------- 1 boinc boinc 176123363 Jul 29 11:47 HITS.45758324._000078.pool.root.1
[2025-07-29 11:48:23] -rw-r--r-- 1 boinc boinc       531 Jul 29 11:47 boinc_task_state.xml
[2025-07-29 11:48:23] -rw------- 1 boinc boinc        95 Jul 29 11:47 pilot_heartbeat.json
[2025-07-29 11:48:23] -rw------- 1 boinc boinc      1035 Jul 29 11:47 memory_monitor_summary.json
[2025-07-29 11:48:23] -rw------- 1 boinc boinc   1589827 Jul 29 11:47 agis_ddmendpoints.agis.ALL.json
[2025-07-29 11:48:23] -rw------- 1 boinc boinc    337321 Jul 29 11:47 log.45758324._000078.job.log.tgz.1
[2025-07-29 11:48:23] -rw------- 1 boinc boinc      7816 Jul 29 11:47 heartbeat.json
[2025-07-29 11:48:23] -rw-r--r-- 1 boinc boinc      8192 Jul 29 11:48 boinc_mmap_file
[2025-07-29 11:48:23] -rw-r--r-- 1 boinc boinc        28 Jul 29 11:48 wrapper_checkpoint.txt
[2025-07-29 11:48:23] -rw------- 1 boinc boinc       821 Jul 29 11:48 pilotlog.txt
[2025-07-29 11:48:23] -rw------- 1 boinc boinc   1436466 Jul 29 11:48 log.45758324._000078.job.log.1
[2025-07-29 11:48:23] -rw------- 1 boinc boinc       357 Jul 29 11:48 output.list
[2025-07-29 11:48:23] -rw-r--r-- 1 boinc boinc       620 Jul 29 11:48 runtime_log
[2025-07-29 11:48:23] -rw------- 1 boinc boinc   1792000 Jul 29 11:48 result.tar.gz
[2025-07-29 11:48:23] -rw------- 1 boinc boinc       664 Jul 29 11:48 v15LDmmj2z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmZZ1KDm6RF9en.diag
[2025-07-29 11:48:23] -rw-r--r-- 1 boinc boinc      9022 Jul 29 11:48 runtime_log.err
[2025-07-29 11:48:23] -rw-r--r-- 1 boinc boinc     20898 Jul 29 11:48 stderr.txt
[2025-07-29 11:48:23] HITS file was successfully produced:
[2025-07-29 11:48:23] -rw------- 1 boinc boinc 176123363 Jul 29 11:47 shared/HITS.pool.root.1
[2025-07-29 11:48:23]  *** Contents of shared directory: ***
[2025-07-29 11:48:23] total 414984
[2025-07-29 11:48:23] -rw-r--r-- 2 boinc boinc 246454685 Jul 29 07:33 ATLAS.root_0
[2025-07-29 11:48:23] -rw-r--r-- 2 boinc boinc    542871 Jul 29 07:33 input.tar.gz
[2025-07-29 11:48:23] -rw-r--r-- 2 boinc boinc     15095 Jul 29 07:33 start_atlas.sh
[2025-07-29 11:48:23] -rw------- 1 boinc boinc 176123363 Jul 29 11:47 HITS.pool.root.1
[2025-07-29 11:48:23] -rw------- 1 boinc boinc   1792000 Jul 29 11:48 result.tar.gz
11:48:25 (546728): run_atlas exited; CPU time 59193.602220
11:48:25 (546728): called boinc_finish(0)

</stderr_txt>
]]>

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