Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:14:40 (14054): wrapper (7.7.26015): starting
02:14:40 (14054): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 02:14:40] Arguments: --nthreads 12
[2025-07-27 02:14:40] Threads: 12
[2025-07-27 02:14:40] Checking for CVMFS
[2025-07-27 02:14:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 02:14:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 02:14:41] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 02:14:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 02:14:41] 2.11.2.0 2913 111628 95052 148802 2 57 15302695 20275201 1 130560 0 38459190 99.971 9799235 10808 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 02:14:41] CVMFS is ok
[2025-07-27 02:14:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 02:14:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 02:14:41] Further information can be found at the LHC@home message board.
[2025-07-27 02:14:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 02:14:41] Checking for apptainer binary...
[2025-07-27 02:14:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 02:14:41] Running /usr/bin/apptainer --version
[2025-07-27 02:14:41] apptainer version 1.3.2-1.el7
[2025-07-27 02:14:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 02:14:42] c-205-6.aglt2.org
[2025-07-27 02:14:42] apptainer works
[2025-07-27 02:14:42] Set ATHENA_PROC_NUMBER=12
[2025-07-27 02:14:42] Set ATHENA_CORE_NUMBER=12
[2025-07-27 02:14:42] Starting ATLAS job with PandaID=6745939989
[2025-07-27 02:14:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 03:49:50]  *** The last 200 lines of the pilot log: ***
[2025-07-27 03:49:50]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-27 03:49:50]  is_altstaged=None
[2025-07-27 03:49:50]  is_tar=False
[2025-07-27 03:49:50]  lfn=log.45759799._000002.job.log.tgz.1
[2025-07-27 03:49:50]  mtime=0
[2025-07-27 03:49:50]  protocol_id=None
[2025-07-27 03:49:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 03:49:50]  replicas=None
[2025-07-27 03:49:50]  scope=mc23_13p6TeV
[2025-07-27 03:49:50]  status=None
[2025-07-27 03:49:50]  status_code=0
[2025-07-27 03:49:50]  storage_token=
[2025-07-27 03:49:50]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745939989/log.45759799._000002.job.log.tgz.1
[2025-07-27 03:49:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/17/1f/log.45759799._000002.job.log.tgz.1
[2025-07-27 03:49:50]  workdir=None
[2025-07-27 03:49:50] ]
[2025-07-27 03:49:50] 2025-07-27 07:49:13,471 | INFO     | transferring file log.45759799._000002.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745939989/log.45759799._000002.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 03:49:50] 2025-07-27 07:49:13,471 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745939989/log.45759799._000002.job.log.tgz.1 /tmp/boinchome/slots/0/log.45759799._000002.job
[2025-07-27 03:49:50] 2025-07-27 07:49:13,492 | INFO     | adding to output.list: log.45759799._000002.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/17/1f/log.45759799._000002.job.log.tg
[2025-07-27 03:49:50] 2025-07-27 07:49:13,493 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 03:49:50] 2025-07-27 07:49:13,493 | INFO     | summary of transferred files:
[2025-07-27 03:49:50] 2025-07-27 07:49:13,493 | INFO     |  -- lfn=log.45759799._000002.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 03:49:50] 2025-07-27 07:49:13,493 | INFO     | stage-out finished correctly
[2025-07-27 03:49:50] 2025-07-27 07:49:13,554 | INFO     | monitor loop #422: job 0:6745939989 is in state 'finished'
[2025-07-27 03:49:50] 2025-07-27 07:49:13,559 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:49:50] 2025-07-27 07:49:13,787 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 03:49:50] 2025-07-27 07:49:13,870 | INFO     | job 6745939989 has state=finished
[2025-07-27 03:49:50] 2025-07-27 07:49:13,870 | INFO     | preparing for final server update for job 6745939989 in state='finished'
[2025-07-27 03:49:50] 2025-07-27 07:49:13,871 | INFO     | this job has now completed (state=finished)
[2025-07-27 03:49:50] 2025-07-27 07:49:13,871 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 03:49:50] 2025-07-27 07:49:13,871 | INFO     | log transfer has been attempted: DONE
[2025-07-27 03:49:50] 2025-07-27 07:49:13,872 | INFO     | job 6745939989 has finished - writing final server update
[2025-07-27 03:49:50] 2025-07-27 07:49:13,872 | INFO     | total number of processed events: 400 (read)
[2025-07-27 03:49:50] 2025-07-27 07:49:13,873 | INFO     | executing command: lscpu
[2025-07-27 03:49:50] 2025-07-27 07:49:13,898 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 03:49:50] 2025-07-27 07:49:16,063 | INFO     | monitor loop #423: job 0:6745939989 is in state 'finished'
[2025-07-27 03:49:50] 2025-07-27 07:49:16,063 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:49:50] 2025-07-27 07:49:18,489 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 03:49:50] 2025-07-27 07:49:18,493 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1884.4166666666667
[2025-07-27 03:49:50] 2025-07-27 07:49:18,496 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745939989/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 03:49:50] 2025-07-27 07:49:18,497 | INFO     | extracted standard info from prmon json
[2025-07-27 03:49:50] 2025-07-27 07:49:18,497 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 03:49:50] 2025-07-27 07:49:18,497 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 03:49:50] 2025-07-27 07:49:18,498 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 03:49:50] 2025-07-27 07:49:18,498 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 03:49:50] 2025-07-27 07:49:18,500 | INFO     | fitting pss+swap vs Time
[2025-07-27 03:49:50] 2025-07-27 07:49:18,500 | INFO     | sum of square deviations: 197203697.5
[2025-07-27 03:49:50] 2025-07-27 07:49:18,501 | INFO     | sum of deviations: -1187182121.9999995
[2025-07-27 03:49:50] 2025-07-27 07:49:18,501 | INFO     | mean x: 1753599823.5
[2025-07-27 03:49:50] 2025-07-27 07:49:18,501 | INFO     | mean y: 2726503.930232558
[2025-07-27 03:49:50] 2025-07-27 07:49:18,501 | INFO     | -- intersect: 10559538500.83285
[2025-07-27 03:49:50] 2025-07-27 07:49:18,501 | INFO     | intersect: 10559538500.83285
[2025-07-27 03:49:50] 2025-07-27 07:49:18,501 | INFO     | chi2: 0.051708021591747685
[2025-07-27 03:49:50] 2025-07-27 07:49:18,501 | INFO     | -- intersect: 10559538500.83285
[2025-07-27 03:49:50] 2025-07-27 07:49:18,502 | INFO     | current memory leak: -6.02 B/s (using 86 data points, chi2=0.05)
[2025-07-27 03:49:50] 2025-07-27 07:49:18,502 | INFO     | could have reported an average CPU frequency of 2153 MHz (7 samples)
[2025-07-27 03:49:50] 2025-07-27 07:49:18,502 | INFO     | ..............................
[2025-07-27 03:49:50] 2025-07-27 07:49:18,502 | INFO     | . Timing measurements:
[2025-07-27 03:49:50] 2025-07-27 07:49:18,502 | INFO     | . get job = 0 s
[2025-07-27 03:49:50] 2025-07-27 07:49:18,502 | INFO     | . initial setup = 2 s
[2025-07-27 03:49:50] 2025-07-27 07:49:18,502 | INFO     | . payload setup = 9 s
[2025-07-27 03:49:50] 2025-07-27 07:49:18,503 | INFO     | . stage-in = 0 s
[2025-07-27 03:49:50] 2025-07-27 07:49:18,503 | INFO     | . payload execution = 5628 s
[2025-07-27 03:49:50] 2025-07-27 07:49:18,503 | INFO     | . stage-out = 0 s
[2025-07-27 03:49:50] 2025-07-27 07:49:18,503 | INFO     | . log creation = 0 s
[2025-07-27 03:49:50] 2025-07-27 07:49:18,503 | INFO     | ..............................
[2025-07-27 03:49:50] 2025-07-27 07:49:18,645 | INFO     | 
[2025-07-27 03:49:50] 2025-07-27 07:49:18,645 | INFO     | job summary report
[2025-07-27 03:49:50] 2025-07-27 07:49:18,645 | INFO     | --------------------------------------------------
[2025-07-27 03:49:50] 2025-07-27 07:49:18,645 | INFO     | PanDA job id: 6745939989
[2025-07-27 03:49:50] 2025-07-27 07:49:18,645 | INFO     | task id: 45759799
[2025-07-27 03:49:50] 2025-07-27 07:49:18,646 | INFO     | errors: (none)
[2025-07-27 03:49:50] 2025-07-27 07:49:18,646 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 03:49:50] 2025-07-27 07:49:18,646 | INFO     | pilot state: finished 
[2025-07-27 03:49:50] 2025-07-27 07:49:18,646 | INFO     | transexitcode: 0
[2025-07-27 03:49:50] 2025-07-27 07:49:18,646 | INFO     | exeerrorcode: 0
[2025-07-27 03:49:50] 2025-07-27 07:49:18,646 | INFO     | exeerrordiag: 
[2025-07-27 03:49:50] 2025-07-27 07:49:18,647 | INFO     | exitcode: 0
[2025-07-27 03:49:50] 2025-07-27 07:49:18,647 | INFO     | exitmsg: OK
[2025-07-27 03:49:50] 2025-07-27 07:49:18,647 | INFO     | cpuconsumptiontime: 62477 s
[2025-07-27 03:49:50] 2025-07-27 07:49:18,647 | INFO     | nevents: 400
[2025-07-27 03:49:50] 2025-07-27 07:49:18,647 | INFO     | neventsw: 0
[2025-07-27 03:49:50] 2025-07-27 07:49:18,647 | INFO     | pid: 24224
[2025-07-27 03:49:50] 2025-07-27 07:49:18,648 | INFO     | pgrp: 24224
[2025-07-27 03:49:50] 2025-07-27 07:49:18,648 | INFO     | corecount: 12
[2025-07-27 03:49:50] 2025-07-27 07:49:18,648 | INFO     | event service: False
[2025-07-27 03:49:50] 2025-07-27 07:49:18,648 | INFO     | sizes: {0: 2397451, 1: 2397479, 5: 2397741, 11: 2397797, 5641: 2424402, 5642: 2433584, 5647: 2433722}
[2025-07-27 03:49:50] 2025-07-27 07:49:18,648 | INFO     | --------------------------------------------------
[2025-07-27 03:49:50] 2025-07-27 07:49:18,648 | INFO     | 
[2025-07-27 03:49:50] 2025-07-27 07:49:18,648 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 03:49:50] 2025-07-27 07:49:18,672 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 03:49:50] 2025-07-27 07:49:18,672 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 03:49:50] 2025-07-27 07:49:18,672 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 03:49:50] 2025-07-27 07:49:18,672 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 03:49:50] 2025-07-27 07:49:18,673 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 03:49:50] 2025-07-27 07:49:18,673 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 03:49:50] 2025-07-27 07:49:18,673 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 03:49:50] 2025-07-27 07:49:18,673 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 03:49:50] 2025-07-27 07:49:18,673 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 03:49:50] 2025-07-27 07:49:18,674 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 03:49:50] 2025-07-27 07:49:18,674 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 03:49:50] 2025-07-27 07:49:18,674 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 03:49:50] 2025-07-27 07:49:18,674 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 03:49:50] 2025-07-27 07:49:18,674 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 03:49:50] 2025-07-27 07:49:18,674 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 03:49:50] 2025-07-27 07:49:18,675 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 03:49:50] 2025-07-27 07:49:18,675 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 03:49:50] 2025-07-27 07:49:18,675 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 03:49:50] 2025-07-27 07:49:18,675 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 03:49:50] 2025-07-27 07:49:18,675 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 03:49:50] 2025-07-27 07:49:18,676 | INFO     | job 6745939989 has completed (purged errors)
[2025-07-27 03:49:50] 2025-07-27 07:49:18,676 | INFO     | overall cleanup function is called
[2025-07-27 03:49:50] 2025-07-27 07:49:19,684 | INFO     | --- collectZombieJob: --- 10, [24224]
[2025-07-27 03:49:50] 2025-07-27 07:49:19,684 | INFO     | zombie collector waiting for pid 24224
[2025-07-27 03:49:50] 2025-07-27 07:49:19,684 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 03:49:50] 2025-07-27 07:49:19,684 | INFO     | collected zombie processes
[2025-07-27 03:49:50] 2025-07-27 07:49:19,684 | INFO     | will attempt to kill all subprocesses of pid=24224
[2025-07-27 03:49:50] 2025-07-27 07:49:19,776 | INFO     | process IDs to be killed: [24224] (in reverse order)
[2025-07-27 03:49:50] 2025-07-27 07:49:19,829 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 03:49:50] 2025-07-27 07:49:19,829 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 03:49:50] 2025-07-27 07:49:19,833 | INFO     | did not find any defunct processes belonging to 24224
[2025-07-27 03:49:50] 2025-07-27 07:49:19,836 | INFO     | did not find any defunct processes belonging to 24224
[2025-07-27 03:49:50] 2025-07-27 07:49:19,837 | INFO     | ready for new job
[2025-07-27 03:49:50] 2025-07-27 07:49:19,837 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 03:49:50] 2025-07-27 07:49:19,838 | INFO     | ***************************************
[2025-07-27 03:49:50] 2025-07-27 07:49:19,838 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 03:49:50] 2025-07-27 07:49:19,838 | INFO     | ***************************************
[2025-07-27 03:49:50] 2025-07-27 07:49:19,838 | INFO     | 
[2025-07-27 03:49:50] 2025-07-27 07:49:19,839 | INFO     | architecture information:
[2025-07-27 03:49:50] 2025-07-27 07:49:19,840 | INFO     | executing command: cat /etc/os-release
[2025-07-27 03:49:50] 2025-07-27 07:49:19,855 | INFO     | cat /etc/os-release:
[2025-07-27 03:49:50] NAME="CentOS Linux"
[2025-07-27 03:49:50] VERSION="7 (Core)"
[2025-07-27 03:49:50] ID="centos"
[2025-07-27 03:49:50] ID_LIKE="rhel fedora"
[2025-07-27 03:49:50] VERSION_ID="7"
[2025-07-27 03:49:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 03:49:50] ANSI_COLOR="0;31"
[2025-07-27 03:49:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 03:49:50] HOME_URL="https://www.centos.org/"
[2025-07-27 03:49:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 03:49:50] 
[2025-07-27 03:49:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 03:49:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 03:49:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 03:49:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 03:49:50] 
[2025-07-27 03:49:50] 2025-07-27 07:49:19,855 | INFO     | ***************************************
[2025-07-27 03:49:50] 2025-07-27 07:49:20,358 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 03:49:50] 2025-07-27 07:49:20,375 | INFO     | sufficient remaining disk space (29370613760 B)
[2025-07-27 03:49:50] 2025-07-27 07:49:20,375 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 03:49:50] 2025-07-27 07:49:20,375 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 03:49:50] 2025-07-27 07:49:20,376 | INFO     | update_server=False
[2025-07-27 03:49:50] 2025-07-27 07:49:20,376 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 03:49:50] 2025-07-27 07:49:20,376 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 03:49:50] 2025-07-27 07:49:20,376 | INFO     | aborting loop
[2025-07-27 03:49:50] 2025-07-27 07:49:20,377 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 03:49:50] 2025-07-27 07:49:20,377 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 03:49:50] 2025-07-27 07:49:20,452 | INFO     | all payload control threads have been joined
[2025-07-27 03:49:50] 2025-07-27 07:49:20,676 | INFO     | all data control threads have been joined
[2025-07-27 03:49:50] 2025-07-27 07:49:21,381 | INFO     | [job] retrieve thread has finished
[2025-07-27 03:49:50] 2025-07-27 07:49:21,382 | INFO     | [job] job monitor thread has finished
[2025-07-27 03:49:50] 2025-07-27 07:49:21,383 | INFO     | [job] queue monitor thread has finished
[2025-07-27 03:49:50] 2025-07-27 07:49:21,431 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 03:49:50] 2025-07-27 07:49:21,457 | INFO     | [payload] control thread has finished
[2025-07-27 03:49:50] 2025-07-27 07:49:21,462 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 03:49:50] 2025-07-27 07:49:21,503 | INFO     | all job control threads have been joined
[2025-07-27 03:49:50] 2025-07-27 07:49:21,591 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 03:49:50] 2025-07-27 07:49:21,677 | INFO     | [data] control thread has finished
[2025-07-27 03:49:50] 2025-07-27 07:49:21,764 | INFO     | [payload] validate_post thread has finished
[2025-07-27 03:49:50] 2025-07-27 07:49:21,843 | INFO     | [data] copytool_in thread has finished
[2025-07-27 03:49:50] 2025-07-27 07:49:21,872 | INFO     | [payload] failed_post thread has finished
[2025-07-27 03:49:50] 2025-07-27 07:49:22,508 | INFO     | [job] control thread has finished
[2025-07-27 03:49:50] 2025-07-27 07:49:22,571 | INFO     | [job] validate thread has finished
[2025-07-27 03:49:50] 2025-07-27 07:49:22,686 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 03:49:50] 2025-07-27 07:49:23,597 | INFO     | [data] copytool_out thread has finished
[2025-07-27 03:49:50] 2025-07-27 07:49:24,383 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 03:49:50] 2025-07-27 07:49:30,660 | INFO     | job.realtimelogging is not enabled
[2025-07-27 03:49:50] 2025-07-27 07:49:31,666 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 03:49:50] 2025-07-27 07:49:33,345 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140174047815488)>', '<ExcThread(monitor, started 140173606106880)>']
[2025-07-27 03:49:50] 2025-07-27 07:49:38,370 | INFO     | all workflow threads have been joined
[2025-07-27 03:49:50] 2025-07-27 07:49:38,370 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 03:49:50] 2025-07-27 07:49:38,370 | INFO     | traces error code: 0
[2025-07-27 03:49:50] 2025-07-27 07:49:38,370 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 03:49:50] 2025-07-27 07:49:49,876 | INFO     | PID=17647 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 03:49:50] 2025-07-27 07:49:49,876 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 03:49:50] 2025-07-27 07:49:49,876 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 03:49:50] 2025-07-27 07:49:49,876 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 03:49:50] 2025-07-27 07:49:49,876 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 03:49:50] 2025-07-27 07:49:49,877 | INFO     | [monitor] control thread has ended
[2025-07-27 03:49:50] 2025-07-27 07:49:49,962 [wrapper] ==== pilot stdout END ====
[2025-07-27 03:49:50] 2025-07-27 07:49:49,966 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 03:49:50] 2025-07-27 07:49:49,970 [wrapper] pilotpid: 17647
[2025-07-27 03:49:50] 2025-07-27 07:49:49,973 [wrapper] Pilot exit status: 0
[2025-07-27 03:49:50] 2025-07-27 07:49:49,987 [wrapper] pandaids: 6745939989
[2025-07-27 03:49:50] 2025-07-27 07:49:50,028 [wrapper] cleanup supervisor_pilot 25380 17648
[2025-07-27 03:49:50] 2025-07-27 07:49:50,032 [wrapper] Test setup, not cleaning
[2025-07-27 03:49:50] 2025-07-27 07:49:50,036 [wrapper] apfmon messages muted
[2025-07-27 03:49:50] 2025-07-27 07:49:50,040 [wrapper] ==== wrapper stdout END ====
[2025-07-27 03:49:50] 2025-07-27 07:49:50,043 [wrapper] ==== wrapper stderr END ====
[2025-07-27 03:49:50]  *** Error codes and diagnostics ***
[2025-07-27 03:49:50]     "exeErrorCode": 0,
[2025-07-27 03:49:50]     "exeErrorDiag": "",
[2025-07-27 03:49:50]     "pilotErrorCode": 0,
[2025-07-27 03:49:50]     "pilotErrorDiag": "",
[2025-07-27 03:49:50]  *** Listing of results directory ***
[2025-07-27 03:49:50] total 405112
[2025-07-27 03:49:50] -rwx------ 1 boincer umatlas     36292 Jul 26 21:23 runpilot2-wrapper.sh
[2025-07-27 03:49:50] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 21:23 queuedata.json
[2025-07-27 03:49:50] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 21:23 pilot3.tar.gz
[2025-07-27 03:49:50] -rw-r--r-- 1 boincer umatlas       100 Jul 27 02:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 03:49:50] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 02:14 run_atlas
[2025-07-27 03:49:50] -rw-r--r-- 1 boincer umatlas       105 Jul 27 02:14 job.xml
[2025-07-27 03:49:50] -rw-r--r-- 2 boincer umatlas 237905899 Jul 27 02:14 EVNT.45759797._000001.pool.root.1
[2025-07-27 03:49:50] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 02:14 start_atlas.sh
[2025-07-27 03:49:50] drwxrwx--x 2 boincer umatlas      4096 Jul 27 02:14 shared
[2025-07-27 03:49:50] -rw-r--r-- 2 boincer umatlas    542861 Jul 27 02:14 input.tar.gz
[2025-07-27 03:49:50] -rw-r--r-- 1 boincer umatlas         0 Jul 27 02:14 boinc_lockfile
[2025-07-27 03:49:50] -rw-r--r-- 1 boincer umatlas      2549 Jul 27 02:14 pandaJob.out
[2025-07-27 03:49:50] -rw------- 1 boincer umatlas    980109 Jul 27 02:14 agis_schedconf.cvmfs.json
[2025-07-27 03:49:50] -rw------- 1 boincer umatlas   1593052 Jul 27 02:14 agis_ddmendpoints.agis.ALL.json
[2025-07-27 03:49:50] drwx------ 4 boincer umatlas      4096 Jul 27 02:14 pilot3
[2025-07-27 03:49:50] -rw------- 1 boincer umatlas 171272772 Jul 27 03:48 HITS.45759799._000002.pool.root.1
[2025-07-27 03:49:50] -rw-r--r-- 1 boincer umatlas       530 Jul 27 03:49 boinc_task_state.xml
[2025-07-27 03:49:50] -rw------- 1 boincer umatlas      1050 Jul 27 03:49 memory_monitor_summary.json
[2025-07-27 03:49:50] -rw-r--r-- 1 boincer umatlas      5867 Jul 27 03:49 init_data.xml
[2025-07-27 03:49:50] -rw------- 1 boincer umatlas        95 Jul 27 03:49 pilot_heartbeat.json
[2025-07-27 03:49:50] -rw------- 1 boincer umatlas    360113 Jul 27 03:49 log.45759799._000002.job.log.tgz.1
[2025-07-27 03:49:50] -rw------- 1 boincer umatlas      7847 Jul 27 03:49 heartbeat.json
[2025-07-27 03:49:50] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 03:49 boinc_mmap_file
[2025-07-27 03:49:50] -rw-r--r-- 1 boincer umatlas        27 Jul 27 03:49 wrapper_checkpoint.txt
[2025-07-27 03:49:50] -rw------- 1 boincer umatlas       745 Jul 27 03:49 pilotlog.txt
[2025-07-27 03:49:50] -rw------- 1 boincer umatlas    533036 Jul 27 03:49 log.45759799._000002.job.log.1
[2025-07-27 03:49:50] -rw------- 1 boincer umatlas       357 Jul 27 03:49 output.list
[2025-07-27 03:49:50] -rw-r--r-- 1 boincer umatlas       620 Jul 27 03:49 runtime_log
[2025-07-27 03:49:50] -rw------- 1 boincer umatlas    911360 Jul 27 03:49 result.tar.gz
[2025-07-27 03:49:50] -rw-r--r-- 1 boincer umatlas      8657 Jul 27 03:49 runtime_log.err
[2025-07-27 03:49:50] -rw------- 1 boincer umatlas       658 Jul 27 03:49 M5BMDmuH5z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmInTLDm500eAo.diag
[2025-07-27 03:49:50] -rw-r--r-- 1 boincer umatlas     21420 Jul 27 03:49 stderr.txt
[2025-07-27 03:49:50] HITS file was successfully produced:
[2025-07-27 03:49:50] -rw------- 1 boincer umatlas 171272772 Jul 27 03:48 shared/HITS.pool.root.1
[2025-07-27 03:49:50]  *** Contents of shared directory: ***
[2025-07-27 03:49:50] total 401032
[2025-07-27 03:49:50] -rw-r--r-- 2 boincer umatlas 237905899 Jul 27 02:14 ATLAS.root_0
[2025-07-27 03:49:50] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 02:14 start_atlas.sh
[2025-07-27 03:49:50] -rw-r--r-- 2 boincer umatlas    542861 Jul 27 02:14 input.tar.gz
[2025-07-27 03:49:50] -rw------- 1 boincer umatlas 171272772 Jul 27 03:48 HITS.pool.root.1
[2025-07-27 03:49:50] -rw------- 1 boincer umatlas    911360 Jul 27 03:49 result.tar.gz
03:49:51 (14054): run_atlas exited; CPU time 62441.115087
03:49:51 (14054): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN