Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:15:19 (2507497): wrapper (7.7.26015): starting
02:15:19 (2507497): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 02:15:19] Arguments: --nthreads 8
[2025-07-27 02:15:19] Threads: 8
[2025-07-27 02:15:19] Checking for CVMFS
[2025-07-27 02:15:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 02:15:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 02:15:19] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 02:15:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 02:15:20] 2.12.6.0 126724 13789 367108 148802 3 236 27842855 32935937 19747 16776704 2 44390233 99.663 71392199 11565 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 02:15:20] CVMFS is ok
[2025-07-27 02:15:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 02:15:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 02:15:20] Further information can be found at the LHC@home message board.
[2025-07-27 02:15:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 02:15:20] Checking for apptainer binary...
[2025-07-27 02:15:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 02:15:20] Running /usr/bin/apptainer --version
[2025-07-27 02:15:20] apptainer version 1.4.1-1.el9
[2025-07-27 02:15:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 02:15:20] c6-12-27-3.aglt2.org
[2025-07-27 02:15:20] apptainer works
[2025-07-27 02:15:20] Set ATHENA_PROC_NUMBER=8
[2025-07-27 02:15:20] Set ATHENA_CORE_NUMBER=8
[2025-07-27 02:15:20] Starting ATLAS job with PandaID=6745939287
[2025-07-27 02:15:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 04:02:16]  *** The last 200 lines of the pilot log: ***
[2025-07-27 04:02:16] 2025-07-27 08:01:39,771 | INFO     | PID=2511430 has CPU usage=14.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 04:02:16] 2025-07-27 08:01:39,771 | INFO     | .. there are 26 such processes running
[2025-07-27 04:02:16] 2025-07-27 08:01:41,151 | INFO     | monitor loop #463: job 0:6745939287 is in state 'finished'
[2025-07-27 04:02:16] 2025-07-27 08:01:41,151 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 04:02:16] 2025-07-27 08:01:43,607 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 04:02:16] 2025-07-27 08:01:43,619 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2764.4436770833327
[2025-07-27 04:02:16] 2025-07-27 08:01:43,635 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745939287/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 04:02:16] 2025-07-27 08:01:43,635 | INFO     | extracted standard info from prmon json
[2025-07-27 04:02:16] 2025-07-27 08:01:43,636 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 04:02:16] 2025-07-27 08:01:43,636 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 04:02:16] 2025-07-27 08:01:43,636 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 04:02:16] 2025-07-27 08:01:43,636 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 04:02:16] 2025-07-27 08:01:43,638 | INFO     | fitting pss+swap vs Time
[2025-07-27 04:02:16] 2025-07-27 08:01:43,639 | INFO     | sum of square deviations: 348769330.0
[2025-07-27 04:02:16] 2025-07-27 08:01:43,639 | INFO     | sum of deviations: 15036313766.999998
[2025-07-27 04:02:16] 2025-07-27 08:01:43,639 | INFO     | mean x: 1753600106.5
[2025-07-27 04:02:16] 2025-07-27 08:01:43,639 | INFO     | mean y: 2163202.673076923
[2025-07-27 04:02:16] 2025-07-27 08:01:43,639 | INFO     | -- intersect: -75599901414.58731
[2025-07-27 04:02:16] 2025-07-27 08:01:43,640 | INFO     | intersect: -75599901414.58731
[2025-07-27 04:02:16] 2025-07-27 08:01:43,640 | INFO     | chi2: 1.6500728288852817
[2025-07-27 04:02:16] 2025-07-27 08:01:43,640 | INFO     | sum of square deviations: 300842850.0
[2025-07-27 04:02:16] 2025-07-27 08:01:43,640 | INFO     | sum of deviations: 14730125059.999998
[2025-07-27 04:02:16] 2025-07-27 08:01:43,641 | INFO     | mean x: 1753599954.0
[2025-07-27 04:02:16] 2025-07-27 08:01:43,641 | INFO     | mean y: 2162209.5454545454
[2025-07-27 04:02:16] 2025-07-27 08:01:43,641 | INFO     | -- intersect: -85859099334.91286
[2025-07-27 04:02:16] 2025-07-27 08:01:43,641 | INFO     | intersect: -85859099334.91286
[2025-07-27 04:02:16] 2025-07-27 08:01:43,641 | INFO     | chi2: 1.6483986302757117
[2025-07-27 04:02:16] 2025-07-27 08:01:43,641 | INFO     | current chi2=1.6483986302757117 (change=0.10146210399095494 %)
[2025-07-27 04:02:16] 2025-07-27 08:01:43,641 | INFO     | right removable region: 98
[2025-07-27 04:02:16] 2025-07-27 08:01:43,641 | INFO     | sum of square deviations: 300842850.0
[2025-07-27 04:02:16] 2025-07-27 08:01:43,642 | INFO     | sum of deviations: -1537412524.0000002
[2025-07-27 04:02:16] 2025-07-27 08:01:43,642 | INFO     | mean x: 1753600259.0
[2025-07-27 04:02:16] 2025-07-27 08:01:43,642 | INFO     | mean y: 2215235.9393939395
[2025-07-27 04:02:16] 2025-07-27 08:01:43,642 | INFO     | -- intersect: 8963727867.122898
[2025-07-27 04:02:16] 2025-07-27 08:01:43,642 | INFO     | intersect: 8963727867.122898
[2025-07-27 04:02:16] 2025-07-27 08:01:43,642 | INFO     | chi2: 0.018533912444027672
[2025-07-27 04:02:16] 2025-07-27 08:01:43,642 | INFO     | current chi2=0.018533912444027672 (change=98.87678215654589 %)
[2025-07-27 04:02:16] 2025-07-27 08:01:43,643 | INFO     | sum of square deviations: 257521107.5
[2025-07-27 04:02:16] 2025-07-27 08:01:43,643 | INFO     | sum of deviations: -1524080608.0
[2025-07-27 04:02:16] 2025-07-27 08:01:43,643 | INFO     | mean x: 1753600411.5
[2025-07-27 04:02:16] 2025-07-27 08:01:43,643 | INFO     | mean y: 2215229.404255319
[2025-07-27 04:02:16] 2025-07-27 08:01:43,644 | INFO     | -- intersect: 10380503857.0577
[2025-07-27 04:02:16] 2025-07-27 08:01:43,644 | INFO     | intersect: 10380503857.0577
[2025-07-27 04:02:16] 2025-07-27 08:01:43,644 | INFO     | chi2: 0.015241194882546119
[2025-07-27 04:02:16] 2025-07-27 08:01:43,644 | INFO     | current chi2=0.015241194882546119 (change=17.765906531745763 %)
[2025-07-27 04:02:16] 2025-07-27 08:01:43,644 | INFO     | left removable region: 20
[2025-07-27 04:02:16] 2025-07-27 08:01:43,644 | INFO     | sum of square deviations: 147126479.5
[2025-07-27 04:02:16] 2025-07-27 08:01:43,645 | INFO     | sum of deviations: -1323752887.0
[2025-07-27 04:02:16] 2025-07-27 08:01:43,645 | INFO     | mean x: 1753600533.5
[2025-07-27 04:02:16] 2025-07-27 08:01:43,645 | INFO     | mean y: 2217856.5384615385
[2025-07-27 04:02:16] 2025-07-27 08:01:43,645 | INFO     | -- intersect: 15780028735.683199
[2025-07-27 04:02:16] 2025-07-27 08:01:43,645 | INFO     | intersect: 15780028735.683199
[2025-07-27 04:02:16] 2025-07-27 08:01:43,645 | INFO     | chi2: 0.011929647903740462
[2025-07-27 04:02:16] 2025-07-27 08:01:43,645 | INFO     | -- intersect: 15780028735.683199
[2025-07-27 04:02:16] 2025-07-27 08:01:43,645 | INFO     | current memory leak: -9.00 B/s (using 78 data points, chi2=0.01)
[2025-07-27 04:02:16] 2025-07-27 08:01:43,646 | INFO     | could have reported an average CPU frequency of 2731 MHz (7 samples)
[2025-07-27 04:02:16] 2025-07-27 08:01:43,646 | INFO     | ..............................
[2025-07-27 04:02:16] 2025-07-27 08:01:43,646 | INFO     | . Timing measurements:
[2025-07-27 04:02:16] 2025-07-27 08:01:43,646 | INFO     | . get job = 0 s
[2025-07-27 04:02:16] 2025-07-27 08:01:43,646 | INFO     | . initial setup = 5 s
[2025-07-27 04:02:16] 2025-07-27 08:01:43,646 | INFO     | . payload setup = 8 s
[2025-07-27 04:02:16] 2025-07-27 08:01:43,646 | INFO     | . stage-in = 0 s
[2025-07-27 04:02:16] 2025-07-27 08:01:43,646 | INFO     | . payload execution = 6329 s
[2025-07-27 04:02:16] 2025-07-27 08:01:43,647 | INFO     | . stage-out = 0 s
[2025-07-27 04:02:16] 2025-07-27 08:01:43,647 | INFO     | . log creation = 0 s
[2025-07-27 04:02:16] 2025-07-27 08:01:43,647 | INFO     | ..............................
[2025-07-27 04:02:16] 2025-07-27 08:01:44,007 | INFO     | 
[2025-07-27 04:02:16] 2025-07-27 08:01:44,007 | INFO     | job summary report
[2025-07-27 04:02:16] 2025-07-27 08:01:44,007 | INFO     | --------------------------------------------------
[2025-07-27 04:02:16] 2025-07-27 08:01:44,007 | INFO     | PanDA job id: 6745939287
[2025-07-27 04:02:16] 2025-07-27 08:01:44,007 | INFO     | task id: 45758350
[2025-07-27 04:02:16] 2025-07-27 08:01:44,007 | INFO     | errors: (none)
[2025-07-27 04:02:16] 2025-07-27 08:01:44,008 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 04:02:16] 2025-07-27 08:01:44,008 | INFO     | pilot state: finished 
[2025-07-27 04:02:16] 2025-07-27 08:01:44,008 | INFO     | transexitcode: 0
[2025-07-27 04:02:16] 2025-07-27 08:01:44,008 | INFO     | exeerrorcode: 0
[2025-07-27 04:02:16] 2025-07-27 08:01:44,008 | INFO     | exeerrordiag: 
[2025-07-27 04:02:16] 2025-07-27 08:01:44,008 | INFO     | exitcode: 0
[2025-07-27 04:02:16] 2025-07-27 08:01:44,008 | INFO     | exitmsg: OK
[2025-07-27 04:02:16] 2025-07-27 08:01:44,008 | INFO     | cpuconsumptiontime: 47382 s
[2025-07-27 04:02:16] 2025-07-27 08:01:44,008 | INFO     | nevents: 400
[2025-07-27 04:02:16] 2025-07-27 08:01:44,008 | INFO     | neventsw: 0
[2025-07-27 04:02:16] 2025-07-27 08:01:44,008 | INFO     | pid: 2517885
[2025-07-27 04:02:16] 2025-07-27 08:01:44,008 | INFO     | pgrp: 2517885
[2025-07-27 04:02:16] 2025-07-27 08:01:44,008 | INFO     | corecount: 8
[2025-07-27 04:02:16] 2025-07-27 08:01:44,009 | INFO     | event service: False
[2025-07-27 04:02:16] 2025-07-27 08:01:44,009 | INFO     | sizes: {0: 2397483, 5: 2397745, 11: 2397801, 6341: 2424553, 6343: 2433607, 6352: 2433745}
[2025-07-27 04:02:16] 2025-07-27 08:01:44,009 | INFO     | --------------------------------------------------
[2025-07-27 04:02:16] 2025-07-27 08:01:44,009 | INFO     | 
[2025-07-27 04:02:16] 2025-07-27 08:01:44,009 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 04:02:16] 2025-07-27 08:01:44,028 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 04:02:16] 2025-07-27 08:01:44,029 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 04:02:16] 2025-07-27 08:01:44,029 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 04:02:16] 2025-07-27 08:01:44,029 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 04:02:16] 2025-07-27 08:01:44,029 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 04:02:16] 2025-07-27 08:01:44,029 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 04:02:16] 2025-07-27 08:01:44,029 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 04:02:16] 2025-07-27 08:01:44,029 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 04:02:16] 2025-07-27 08:01:44,029 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 04:02:16] 2025-07-27 08:01:44,029 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 04:02:16] 2025-07-27 08:01:44,029 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 04:02:16] 2025-07-27 08:01:44,029 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 04:02:16] 2025-07-27 08:01:44,030 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 04:02:16] 2025-07-27 08:01:44,030 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 04:02:16] 2025-07-27 08:01:44,030 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 04:02:16] 2025-07-27 08:01:44,030 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 04:02:16] 2025-07-27 08:01:44,030 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 04:02:16] 2025-07-27 08:01:44,030 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 04:02:16] 2025-07-27 08:01:44,030 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 04:02:16] 2025-07-27 08:01:44,030 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 04:02:16] 2025-07-27 08:01:44,030 | INFO     | job 6745939287 has completed (purged errors)
[2025-07-27 04:02:16] 2025-07-27 08:01:44,030 | INFO     | overall cleanup function is called
[2025-07-27 04:02:16] 2025-07-27 08:01:45,039 | INFO     | --- collectZombieJob: --- 10, [2517885]
[2025-07-27 04:02:16] 2025-07-27 08:01:45,039 | INFO     | zombie collector waiting for pid 2517885
[2025-07-27 04:02:16] 2025-07-27 08:01:45,040 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 04:02:16] 2025-07-27 08:01:45,040 | INFO     | collected zombie processes
[2025-07-27 04:02:16] 2025-07-27 08:01:45,040 | INFO     | will attempt to kill all subprocesses of pid=2517885
[2025-07-27 04:02:16] 2025-07-27 08:01:45,460 | INFO     | process IDs to be killed: [2517885] (in reverse order)
[2025-07-27 04:02:16] 2025-07-27 08:01:45,589 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 04:02:16] 2025-07-27 08:01:45,589 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 04:02:16] 2025-07-27 08:01:45,607 | INFO     | did not find any defunct processes belonging to 2517885
[2025-07-27 04:02:16] 2025-07-27 08:01:45,625 | INFO     | did not find any defunct processes belonging to 2517885
[2025-07-27 04:02:16] 2025-07-27 08:01:45,625 | INFO     | ready for new job
[2025-07-27 04:02:16] 2025-07-27 08:01:45,625 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 04:02:16] 2025-07-27 08:01:45,627 | INFO     | ***************************************
[2025-07-27 04:02:16] 2025-07-27 08:01:45,627 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 04:02:16] 2025-07-27 08:01:45,627 | INFO     | ***************************************
[2025-07-27 04:02:16] 2025-07-27 08:01:45,627 | INFO     | 
[2025-07-27 04:02:16] 2025-07-27 08:01:45,645 | INFO     | architecture information:
[2025-07-27 04:02:16] 2025-07-27 08:01:45,646 | INFO     | executing command: cat /etc/os-release
[2025-07-27 04:02:16] 2025-07-27 08:01:45,663 | INFO     | cat /etc/os-release:
[2025-07-27 04:02:16] NAME="CentOS Linux"
[2025-07-27 04:02:16] VERSION="7 (Core)"
[2025-07-27 04:02:16] ID="centos"
[2025-07-27 04:02:16] ID_LIKE="rhel fedora"
[2025-07-27 04:02:16] VERSION_ID="7"
[2025-07-27 04:02:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 04:02:16] ANSI_COLOR="0;31"
[2025-07-27 04:02:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 04:02:16] HOME_URL="https://www.centos.org/"
[2025-07-27 04:02:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 04:02:16] 
[2025-07-27 04:02:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 04:02:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 04:02:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 04:02:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 04:02:16] 
[2025-07-27 04:02:16] 2025-07-27 08:01:45,663 | INFO     | ***************************************
[2025-07-27 04:02:16] 2025-07-27 08:01:46,166 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 04:02:16] 2025-07-27 08:01:46,183 | INFO     | sufficient remaining disk space (95457116160 B)
[2025-07-27 04:02:16] 2025-07-27 08:01:46,183 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 04:02:16] 2025-07-27 08:01:46,184 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 04:02:16] 2025-07-27 08:01:46,184 | INFO     | update_server=False
[2025-07-27 04:02:16] 2025-07-27 08:01:46,184 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 04:02:16] 2025-07-27 08:01:46,184 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 04:02:16] 2025-07-27 08:01:46,184 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 04:02:16] 2025-07-27 08:01:46,229 | INFO     | all data control threads have been joined
[2025-07-27 04:02:16] 2025-07-27 08:01:46,456 | INFO     | all payload control threads have been joined
[2025-07-27 04:02:16] 2025-07-27 08:01:46,757 | INFO     | all job control threads have been joined
[2025-07-27 04:02:16] 2025-07-27 08:01:47,167 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 04:02:16] 2025-07-27 08:01:47,168 | INFO     | aborting loop
[2025-07-27 04:02:16] 2025-07-27 08:01:47,189 | INFO     | [job] retrieve thread has finished
[2025-07-27 04:02:16] 2025-07-27 08:01:47,219 | INFO     | [payload] failed_post thread has finished
[2025-07-27 04:02:16] 2025-07-27 08:01:47,234 | INFO     | [data] control thread has finished
[2025-07-27 04:02:16] 2025-07-27 08:01:47,308 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 04:02:16] 2025-07-27 08:01:47,461 | INFO     | [payload] control thread has finished
[2025-07-27 04:02:16] 2025-07-27 08:01:47,522 | INFO     | [data] copytool_in thread has finished
[2025-07-27 04:02:16] 2025-07-27 08:01:47,611 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 04:02:16] 2025-07-27 08:01:47,762 | INFO     | [job] control thread has finished
[2025-07-27 04:02:16] 2025-07-27 08:01:48,082 | INFO     | [job] validate thread has finished
[2025-07-27 04:02:16] 2025-07-27 08:01:48,172 | INFO     | [job] job monitor thread has finished
[2025-07-27 04:02:16] 2025-07-27 08:01:48,189 | INFO     | [data] copytool_out thread has finished
[2025-07-27 04:02:16] 2025-07-27 08:01:48,245 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 04:02:16] 2025-07-27 08:01:48,319 | INFO     | [payload] validate_post thread has finished
[2025-07-27 04:02:16] 2025-07-27 08:01:48,552 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 04:02:16] 2025-07-27 08:01:48,751 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 04:02:16] 2025-07-27 08:01:49,756 | INFO     | [job] queue monitor thread has finished
[2025-07-27 04:02:16] 2025-07-27 08:01:50,190 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 04:02:16] 2025-07-27 08:01:50,468 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139744972502848)>', '<ExcThread(monitor, started 139744210056960)>']
[2025-07-27 04:02:16] 2025-07-27 08:01:55,493 | INFO     | all workflow threads have been joined
[2025-07-27 04:02:16] 2025-07-27 08:01:55,493 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 04:02:16] 2025-07-27 08:01:55,493 | INFO     | traces error code: 0
[2025-07-27 04:02:16] 2025-07-27 08:01:55,494 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 04:02:16] 2025-07-27 08:02:16,378 | INFO     | PID=2511430 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 04:02:16] 2025-07-27 08:02:16,379 | INFO     | .. there are 26 such processes running
[2025-07-27 04:02:16] 2025-07-27 08:02:16,380 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 04:02:16] 2025-07-27 08:02:16,380 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 04:02:16] 2025-07-27 08:02:16,380 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 04:02:16] 2025-07-27 08:02:16,380 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 04:02:16] 2025-07-27 08:02:16,380 | INFO     | [monitor] control thread has ended
[2025-07-27 04:02:16] 2025-07-27 08:02:16,549 [wrapper] ==== pilot stdout END ====
[2025-07-27 04:02:16] 2025-07-27 08:02:16,553 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 04:02:16] 2025-07-27 08:02:16,556 [wrapper] pilotpid: 2511430
[2025-07-27 04:02:16] 2025-07-27 08:02:16,559 [wrapper] Pilot exit status: 0
[2025-07-27 04:02:16] 2025-07-27 08:02:16,575 [wrapper] pandaids: 6745939287
[2025-07-27 04:02:16] 2025-07-27 08:02:16,682 [wrapper] cleanup supervisor_pilot 2823303 2511431
[2025-07-27 04:02:16] 2025-07-27 08:02:16,686 [wrapper] Test setup, not cleaning
[2025-07-27 04:02:16] 2025-07-27 08:02:16,691 [wrapper] apfmon messages muted
[2025-07-27 04:02:16] 2025-07-27 08:02:16,695 [wrapper] ==== wrapper stdout END ====
[2025-07-27 04:02:16] 2025-07-27 08:02:16,699 [wrapper] ==== wrapper stderr END ====
[2025-07-27 04:02:16]  *** Error codes and diagnostics ***
[2025-07-27 04:02:16]     "exeErrorCode": 0,
[2025-07-27 04:02:16]     "exeErrorDiag": "",
[2025-07-27 04:02:16]     "pilotErrorCode": 0,
[2025-07-27 04:02:16]     "pilotErrorDiag": "",
[2025-07-27 04:02:16]  *** Listing of results directory ***
[2025-07-27 04:02:16] total 417628
[2025-07-27 04:02:16] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 21:08 pilot3.tar.gz
[2025-07-27 04:02:16] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 21:15 queuedata.json
[2025-07-27 04:02:16] -rwx------. 1 boincer umatlas     36292 Jul 26 21:15 runpilot2-wrapper.sh
[2025-07-27 04:02:16] -rw-r--r--. 1 boincer umatlas       100 Jul 27 02:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 04:02:16] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 02:15 run_atlas
[2025-07-27 04:02:16] -rw-r--r--. 1 boincer umatlas       105 Jul 27 02:15 job.xml
[2025-07-27 04:02:16] -rw-r--r--. 2 boincer umatlas 244612027 Jul 27 02:15 EVNT.45758348._000004.pool.root.1
[2025-07-27 04:02:16] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 02:15 start_atlas.sh
[2025-07-27 04:02:16] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 02:15 shared
[2025-07-27 04:02:16] -rw-r--r--. 2 boincer umatlas    542890 Jul 27 02:15 input.tar.gz
[2025-07-27 04:02:16] -rw-r--r--. 1 boincer umatlas         0 Jul 27 02:15 boinc_lockfile
[2025-07-27 04:02:16] -rw-r--r--. 1 boincer umatlas      2576 Jul 27 02:15 pandaJob.out
[2025-07-27 04:02:16] -rw-------. 1 boincer umatlas    980109 Jul 27 02:15 agis_schedconf.cvmfs.json
[2025-07-27 04:02:16] -rw-------. 1 boincer umatlas   1593052 Jul 27 02:15 agis_ddmendpoints.agis.ALL.json
[2025-07-27 04:02:16] drwx------. 4 boincer umatlas      4096 Jul 27 02:15 pilot3
[2025-07-27 04:02:16] -rw-r--r--. 1 boincer umatlas      6856 Jul 27 03:57 init_data.xml
[2025-07-27 04:02:16] -rw-------. 1 boincer umatlas 177287243 Jul 27 04:00 HITS.45758350._000092.pool.root.1
[2025-07-27 04:02:16] -rw-r--r--. 1 boincer umatlas       529 Jul 27 04:01 boinc_task_state.xml
[2025-07-27 04:02:16] -rw-------. 1 boincer umatlas      1036 Jul 27 04:01 memory_monitor_summary.json
[2025-07-27 04:02:16] -rw-------. 1 boincer umatlas    328245 Jul 27 04:01 log.45758350._000092.job.log.tgz.1
[2025-07-27 04:02:16] -rw-------. 1 boincer umatlas      7814 Jul 27 04:01 heartbeat.json
[2025-07-27 04:02:16] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 04:02 boinc_mmap_file
[2025-07-27 04:02:16] -rw-r--r--. 1 boincer umatlas        27 Jul 27 04:02 wrapper_checkpoint.txt
[2025-07-27 04:02:16] -rw-------. 1 boincer umatlas       823 Jul 27 04:02 pilotlog.txt
[2025-07-27 04:02:16] -rw-------. 1 boincer umatlas        95 Jul 27 04:02 pilot_heartbeat.json
[2025-07-27 04:02:16] -rw-------. 1 boincer umatlas    607595 Jul 27 04:02 log.45758350._000092.job.log.1
[2025-07-27 04:02:16] -rw-------. 1 boincer umatlas       357 Jul 27 04:02 output.list
[2025-07-27 04:02:16] -rw-r--r--. 1 boincer umatlas       620 Jul 27 04:02 runtime_log
[2025-07-27 04:02:16] -rw-------. 1 boincer umatlas    952320 Jul 27 04:02 result.tar.gz
[2025-07-27 04:02:16] -rw-------. 1 boincer umatlas       654 Jul 27 04:02 vfsLDmw94z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmxi1KDmv5HZ0n.diag
[2025-07-27 04:02:16] -rw-r--r--. 1 boincer umatlas      8670 Jul 27 04:02 runtime_log.err
[2025-07-27 04:02:16] -rw-r--r--. 1 boincer umatlas     21221 Jul 27 04:02 stderr.txt
[2025-07-27 04:02:16] HITS file was successfully produced:
[2025-07-27 04:02:16] -rw-------. 1 boincer umatlas 177287243 Jul 27 04:00 shared/HITS.pool.root.1
[2025-07-27 04:02:16]  *** Contents of shared directory: ***
[2025-07-27 04:02:16] total 413504
[2025-07-27 04:02:16] -rw-r--r--. 2 boincer umatlas 244612027 Jul 27 02:15 ATLAS.root_0
[2025-07-27 04:02:16] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 02:15 start_atlas.sh
[2025-07-27 04:02:16] -rw-r--r--. 2 boincer umatlas    542890 Jul 27 02:15 input.tar.gz
[2025-07-27 04:02:16] -rw-------. 1 boincer umatlas 177287243 Jul 27 04:00 HITS.pool.root.1
[2025-07-27 04:02:16] -rw-------. 1 boincer umatlas    952320 Jul 27 04:02 result.tar.gz
04:02:18 (2507497): run_atlas exited; CPU time 47664.979183
04:02:18 (2507497): called boinc_finish(0)

</stderr_txt>
]]>

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