Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:15:31 (13682): wrapper (7.7.26015): starting
02:15:31 (13682): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 02:15:31] Arguments: --nthreads 12
[2025-07-27 02:15:31] Threads: 12
[2025-07-27 02:15:31] Checking for CVMFS
[2025-07-27 02:15:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 02:15:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 02:15:31] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 02:15:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 02:15:31] 2.11.2.0 2987 111583 95836 148802 1 56 13799570 20275201 1 130560 0 38275737 99.972 9858326 10767 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 02:15:31] CVMFS is ok
[2025-07-27 02:15:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 02:15:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 02:15:31] Further information can be found at the LHC@home message board.
[2025-07-27 02:15:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 02:15:31] Checking for apptainer binary...
[2025-07-27 02:15:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 02:15:31] Running /usr/bin/apptainer --version
[2025-07-27 02:15:31] apptainer version 1.3.2-1.el7
[2025-07-27 02:15:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 02:15:33] c-205-19.aglt2.org
[2025-07-27 02:15:33] apptainer works
[2025-07-27 02:15:33] Set ATHENA_PROC_NUMBER=12
[2025-07-27 02:15:33] Set ATHENA_CORE_NUMBER=12
[2025-07-27 02:15:33] Starting ATLAS job with PandaID=6745938996
[2025-07-27 02:15:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 03:51:49]  *** The last 200 lines of the pilot log: ***
[2025-07-27 03:51:49]  is_tar=False
[2025-07-27 03:51:49]  lfn=log.45758392._000049.job.log.tgz.1
[2025-07-27 03:51:49]  mtime=0
[2025-07-27 03:51:49]  protocol_id=None
[2025-07-27 03:51:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 03:51:49]  replicas=None
[2025-07-27 03:51:49]  scope=mc23_13p6TeV
[2025-07-27 03:51:49]  status=None
[2025-07-27 03:51:49]  status_code=0
[2025-07-27 03:51:49]  storage_token=
[2025-07-27 03:51:49]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745938996/log.45758392._000049.job.log.tgz.1
[2025-07-27 03:51:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/3f/log.45758392._000049.job.log.tgz.1
[2025-07-27 03:51:49]  workdir=None
[2025-07-27 03:51:49] ]
[2025-07-27 03:51:49] 2025-07-27 07:51:11,384 | INFO     | transferring file log.45758392._000049.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745938996/log.45758392._000049.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 03:51:49] 2025-07-27 07:51:11,384 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745938996/log.45758392._000049.job.log.tgz.1 /tmp/boinchome/slots/0/log.45758392._000049.job
[2025-07-27 03:51:49] 2025-07-27 07:51:11,406 | INFO     | adding to output.list: log.45758392._000049.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/3f/log.45758392._000049.job.log.tg
[2025-07-27 03:51:49] 2025-07-27 07:51:11,407 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 03:51:49] 2025-07-27 07:51:11,407 | INFO     | summary of transferred files:
[2025-07-27 03:51:49] 2025-07-27 07:51:11,408 | INFO     |  -- lfn=log.45758392._000049.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 03:51:49] 2025-07-27 07:51:11,408 | INFO     | stage-out finished correctly
[2025-07-27 03:51:49] 2025-07-27 07:51:11,528 | INFO     | monitor loop #424: job 0:6745938996 is in state 'finished'
[2025-07-27 03:51:49] 2025-07-27 07:51:11,528 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:51:49] 2025-07-27 07:51:11,856 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 03:51:49] 2025-07-27 07:51:12,562 | INFO     | job 6745938996 has state=finished
[2025-07-27 03:51:49] 2025-07-27 07:51:12,562 | INFO     | preparing for final server update for job 6745938996 in state='finished'
[2025-07-27 03:51:49] 2025-07-27 07:51:12,563 | INFO     | this job has now completed (state=finished)
[2025-07-27 03:51:49] 2025-07-27 07:51:12,563 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 03:51:49] 2025-07-27 07:51:12,563 | INFO     | log transfer has been attempted: DONE
[2025-07-27 03:51:49] 2025-07-27 07:51:12,564 | INFO     | job 6745938996 has finished - writing final server update
[2025-07-27 03:51:49] 2025-07-27 07:51:12,564 | INFO     | total number of processed events: 400 (read)
[2025-07-27 03:51:49] 2025-07-27 07:51:12,565 | INFO     | executing command: lscpu
[2025-07-27 03:51:49] 2025-07-27 07:51:12,591 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 03:51:49] 2025-07-27 07:51:14,031 | INFO     | monitor loop #425: job 0:6745938996 is in state 'finished'
[2025-07-27 03:51:49] 2025-07-27 07:51:14,031 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:51:49] 2025-07-27 07:51:16,534 | INFO     | monitor loop #426: job 0:6745938996 is in state 'finished'
[2025-07-27 03:51:49] 2025-07-27 07:51:16,534 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:51:49] 2025-07-27 07:51:16,540 | INFO     | PID=17276 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 03:51:49] 2025-07-27 07:51:17,236 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 03:51:49] 2025-07-27 07:51:17,240 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.75
[2025-07-27 03:51:49] 2025-07-27 07:51:17,242 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745938996/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 03:51:49] 2025-07-27 07:51:17,243 | INFO     | extracted standard info from prmon json
[2025-07-27 03:51:49] 2025-07-27 07:51:17,243 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 03:51:49] 2025-07-27 07:51:17,243 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 03:51:49] 2025-07-27 07:51:17,243 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 03:51:49] 2025-07-27 07:51:17,244 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 03:51:49] 2025-07-27 07:51:17,246 | INFO     | fitting pss+swap vs Time
[2025-07-27 03:51:49] 2025-07-27 07:51:17,247 | INFO     | sum of square deviations: 204163828.0
[2025-07-27 03:51:49] 2025-07-27 07:51:17,247 | INFO     | sum of deviations: 1134616958.0
[2025-07-27 03:51:49] 2025-07-27 07:51:17,247 | INFO     | mean x: 1753599905.0
[2025-07-27 03:51:49] 2025-07-27 07:51:17,247 | INFO     | mean y: 2709517.4137931033
[2025-07-27 03:51:49] 2025-07-27 07:51:17,247 | INFO     | -- intersect: -9742719970.517775
[2025-07-27 03:51:49] 2025-07-27 07:51:17,247 | INFO     | intersect: -9742719970.517775
[2025-07-27 03:51:49] 2025-07-27 07:51:17,248 | INFO     | chi2: 0.05436174464183739
[2025-07-27 03:51:49] 2025-07-27 07:51:17,248 | INFO     | -- intersect: -9742719970.517775
[2025-07-27 03:51:49] 2025-07-27 07:51:17,248 | INFO     | current memory leak: 5.56 B/s (using 87 data points, chi2=0.05)
[2025-07-27 03:51:49] 2025-07-27 07:51:17,248 | INFO     | could have reported an average CPU frequency of 2123 MHz (7 samples)
[2025-07-27 03:51:49] 2025-07-27 07:51:17,249 | INFO     | ..............................
[2025-07-27 03:51:49] 2025-07-27 07:51:17,249 | INFO     | . Timing measurements:
[2025-07-27 03:51:49] 2025-07-27 07:51:17,249 | INFO     | . get job = 0 s
[2025-07-27 03:51:49] 2025-07-27 07:51:17,249 | INFO     | . initial setup = 2 s
[2025-07-27 03:51:49] 2025-07-27 07:51:17,249 | INFO     | . payload setup = 9 s
[2025-07-27 03:51:49] 2025-07-27 07:51:17,249 | INFO     | . stage-in = 0 s
[2025-07-27 03:51:49] 2025-07-27 07:51:17,249 | INFO     | . payload execution = 5694 s
[2025-07-27 03:51:49] 2025-07-27 07:51:17,249 | INFO     | . stage-out = 0 s
[2025-07-27 03:51:49] 2025-07-27 07:51:17,249 | INFO     | . log creation = 0 s
[2025-07-27 03:51:49] 2025-07-27 07:51:17,249 | INFO     | ..............................
[2025-07-27 03:51:49] 2025-07-27 07:51:17,333 | INFO     | 
[2025-07-27 03:51:49] 2025-07-27 07:51:17,333 | INFO     | job summary report
[2025-07-27 03:51:49] 2025-07-27 07:51:17,334 | INFO     | --------------------------------------------------
[2025-07-27 03:51:49] 2025-07-27 07:51:17,334 | INFO     | PanDA job id: 6745938996
[2025-07-27 03:51:49] 2025-07-27 07:51:17,334 | INFO     | task id: 45758392
[2025-07-27 03:51:49] 2025-07-27 07:51:17,334 | INFO     | errors: (none)
[2025-07-27 03:51:49] 2025-07-27 07:51:17,334 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 03:51:49] 2025-07-27 07:51:17,334 | INFO     | pilot state: finished 
[2025-07-27 03:51:49] 2025-07-27 07:51:17,335 | INFO     | transexitcode: 0
[2025-07-27 03:51:49] 2025-07-27 07:51:17,335 | INFO     | exeerrorcode: 0
[2025-07-27 03:51:49] 2025-07-27 07:51:17,335 | INFO     | exeerrordiag: 
[2025-07-27 03:51:49] 2025-07-27 07:51:17,335 | INFO     | exitcode: 0
[2025-07-27 03:51:49] 2025-07-27 07:51:17,335 | INFO     | exitmsg: OK
[2025-07-27 03:51:49] 2025-07-27 07:51:17,335 | INFO     | cpuconsumptiontime: 63745 s
[2025-07-27 03:51:49] 2025-07-27 07:51:17,335 | INFO     | nevents: 400
[2025-07-27 03:51:49] 2025-07-27 07:51:17,336 | INFO     | neventsw: 0
[2025-07-27 03:51:49] 2025-07-27 07:51:17,336 | INFO     | pid: 23738
[2025-07-27 03:51:49] 2025-07-27 07:51:17,336 | INFO     | pgrp: 23738
[2025-07-27 03:51:49] 2025-07-27 07:51:17,336 | INFO     | corecount: 12
[2025-07-27 03:51:49] 2025-07-27 07:51:17,336 | INFO     | event service: False
[2025-07-27 03:51:49] 2025-07-27 07:51:17,336 | INFO     | sizes: {0: 2397413, 5: 2397675, 11: 2397731, 5707: 2424346, 5709: 2433400, 5714: 2433538}
[2025-07-27 03:51:49] 2025-07-27 07:51:17,336 | INFO     | --------------------------------------------------
[2025-07-27 03:51:49] 2025-07-27 07:51:17,336 | INFO     | 
[2025-07-27 03:51:49] 2025-07-27 07:51:17,337 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 03:51:49] 2025-07-27 07:51:17,362 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 03:51:49] 2025-07-27 07:51:17,362 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 03:51:49] 2025-07-27 07:51:17,362 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 03:51:49] 2025-07-27 07:51:17,362 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 03:51:49] 2025-07-27 07:51:17,362 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 03:51:49] 2025-07-27 07:51:17,362 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 03:51:49] 2025-07-27 07:51:17,363 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 03:51:49] 2025-07-27 07:51:17,363 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 03:51:49] 2025-07-27 07:51:17,363 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 03:51:49] 2025-07-27 07:51:17,363 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 03:51:49] 2025-07-27 07:51:17,363 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 03:51:49] 2025-07-27 07:51:17,363 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 03:51:49] 2025-07-27 07:51:17,364 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 03:51:49] 2025-07-27 07:51:17,364 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 03:51:49] 2025-07-27 07:51:17,364 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 03:51:49] 2025-07-27 07:51:17,364 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 03:51:49] 2025-07-27 07:51:17,364 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 03:51:49] 2025-07-27 07:51:17,364 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 03:51:49] 2025-07-27 07:51:17,365 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 03:51:49] 2025-07-27 07:51:17,365 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 03:51:49] 2025-07-27 07:51:17,365 | INFO     | job 6745938996 has completed (purged errors)
[2025-07-27 03:51:49] 2025-07-27 07:51:17,365 | INFO     | overall cleanup function is called
[2025-07-27 03:51:49] 2025-07-27 07:51:18,373 | INFO     | --- collectZombieJob: --- 10, [23738]
[2025-07-27 03:51:49] 2025-07-27 07:51:18,373 | INFO     | zombie collector waiting for pid 23738
[2025-07-27 03:51:49] 2025-07-27 07:51:18,391 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 03:51:49] 2025-07-27 07:51:18,391 | INFO     | collected zombie processes
[2025-07-27 03:51:49] 2025-07-27 07:51:18,391 | INFO     | will attempt to kill all subprocesses of pid=23738
[2025-07-27 03:51:49] 2025-07-27 07:51:18,483 | INFO     | process IDs to be killed: [23738] (in reverse order)
[2025-07-27 03:51:49] 2025-07-27 07:51:18,536 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 03:51:49] 2025-07-27 07:51:18,536 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 03:51:49] 2025-07-27 07:51:18,540 | INFO     | did not find any defunct processes belonging to 23738
[2025-07-27 03:51:49] 2025-07-27 07:51:18,543 | INFO     | did not find any defunct processes belonging to 23738
[2025-07-27 03:51:49] 2025-07-27 07:51:18,544 | INFO     | ready for new job
[2025-07-27 03:51:49] 2025-07-27 07:51:18,544 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 03:51:49] 2025-07-27 07:51:18,545 | INFO     | ***************************************
[2025-07-27 03:51:49] 2025-07-27 07:51:18,546 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 03:51:49] 2025-07-27 07:51:18,546 | INFO     | ***************************************
[2025-07-27 03:51:49] 2025-07-27 07:51:18,546 | INFO     | 
[2025-07-27 03:51:49] 2025-07-27 07:51:18,547 | INFO     | architecture information:
[2025-07-27 03:51:49] 2025-07-27 07:51:18,547 | INFO     | executing command: cat /etc/os-release
[2025-07-27 03:51:49] 2025-07-27 07:51:18,563 | INFO     | cat /etc/os-release:
[2025-07-27 03:51:49] NAME="CentOS Linux"
[2025-07-27 03:51:49] VERSION="7 (Core)"
[2025-07-27 03:51:49] ID="centos"
[2025-07-27 03:51:49] ID_LIKE="rhel fedora"
[2025-07-27 03:51:49] VERSION_ID="7"
[2025-07-27 03:51:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 03:51:49] ANSI_COLOR="0;31"
[2025-07-27 03:51:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 03:51:49] HOME_URL="https://www.centos.org/"
[2025-07-27 03:51:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 03:51:49] 
[2025-07-27 03:51:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 03:51:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 03:51:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 03:51:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 03:51:49] 
[2025-07-27 03:51:49] 2025-07-27 07:51:18,564 | INFO     | ***************************************
[2025-07-27 03:51:49] 2025-07-27 07:51:19,066 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 03:51:49] 2025-07-27 07:51:19,083 | INFO     | sufficient remaining disk space (29368516608 B)
[2025-07-27 03:51:49] 2025-07-27 07:51:19,084 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 03:51:49] 2025-07-27 07:51:19,084 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 03:51:49] 2025-07-27 07:51:19,084 | INFO     | update_server=False
[2025-07-27 03:51:49] 2025-07-27 07:51:19,084 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 03:51:49] 2025-07-27 07:51:19,085 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 03:51:49] 2025-07-27 07:51:19,505 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 03:51:49] 2025-07-27 07:51:19,760 | INFO     | all payload control threads have been joined
[2025-07-27 03:51:49] 2025-07-27 07:51:19,930 | INFO     | all data control threads have been joined
[2025-07-27 03:51:49] 2025-07-27 07:51:20,043 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 03:51:49] 2025-07-27 07:51:20,043 | INFO     | aborting loop
[2025-07-27 03:51:49] 2025-07-27 07:51:20,090 | INFO     | [job] retrieve thread has finished
[2025-07-27 03:51:49] 2025-07-27 07:51:20,090 | INFO     | [job] queue monitor thread has finished
[2025-07-27 03:51:49] 2025-07-27 07:51:20,311 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 03:51:49] 2025-07-27 07:51:20,336 | INFO     | [payload] failed_post thread has finished
[2025-07-27 03:51:49] 2025-07-27 07:51:20,363 | INFO     | all job control threads have been joined
[2025-07-27 03:51:49] 2025-07-27 07:51:20,415 | INFO     | [data] copytool_in thread has finished
[2025-07-27 03:51:49] 2025-07-27 07:51:20,765 | INFO     | [payload] control thread has finished
[2025-07-27 03:51:49] 2025-07-27 07:51:20,934 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 03:51:49] 2025-07-27 07:51:20,935 | INFO     | [data] control thread has finished
[2025-07-27 03:51:49] 2025-07-27 07:51:21,015 | INFO     | [payload] validate_post thread has finished
[2025-07-27 03:51:49] 2025-07-27 07:51:21,049 | INFO     | [job] job monitor thread has finished
[2025-07-27 03:51:49] 2025-07-27 07:51:21,210 | INFO     | [job] validate thread has finished
[2025-07-27 03:51:49] 2025-07-27 07:51:21,350 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 03:51:49] 2025-07-27 07:51:21,353 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 03:51:49] 2025-07-27 07:51:21,368 | INFO     | [job] control thread has finished
[2025-07-27 03:51:49] 2025-07-27 07:51:21,510 | INFO     | [data] copytool_out thread has finished
[2025-07-27 03:51:49] 2025-07-27 07:51:22,449 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 03:51:49] 2025-07-27 07:51:26,455 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 03:51:49] 2025-07-27 07:51:27,929 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140529745106752)>', '<ExcThread(monitor, started 140528553281280)>']
[2025-07-27 03:51:49] 2025-07-27 07:51:32,955 | INFO     | all workflow threads have been joined
[2025-07-27 03:51:49] 2025-07-27 07:51:32,955 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 03:51:49] 2025-07-27 07:51:32,955 | INFO     | traces error code: 0
[2025-07-27 03:51:49] 2025-07-27 07:51:32,956 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 03:51:49] 2025-07-27 07:51:48,739 | INFO     | PID=17276 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 03:51:49] 2025-07-27 07:51:48,739 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 03:51:49] 2025-07-27 07:51:48,739 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 03:51:49] 2025-07-27 07:51:48,739 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 03:51:49] 2025-07-27 07:51:48,739 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 03:51:49] 2025-07-27 07:51:48,740 | INFO     | [monitor] control thread has ended
[2025-07-27 03:51:49] 2025-07-27 07:51:48,833 [wrapper] ==== pilot stdout END ====
[2025-07-27 03:51:49] 2025-07-27 07:51:48,837 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 03:51:49] 2025-07-27 07:51:48,840 [wrapper] pilotpid: 17276
[2025-07-27 03:51:49] 2025-07-27 07:51:48,844 [wrapper] Pilot exit status: 0
[2025-07-27 03:51:49] 2025-07-27 07:51:48,861 [wrapper] pandaids: 6745938996
[2025-07-27 03:51:49] 2025-07-27 07:51:48,900 [wrapper] cleanup supervisor_pilot 14680 17277
[2025-07-27 03:51:49] 2025-07-27 07:51:48,904 [wrapper] Test setup, not cleaning
[2025-07-27 03:51:49] 2025-07-27 07:51:48,908 [wrapper] apfmon messages muted
[2025-07-27 03:51:49] 2025-07-27 07:51:48,912 [wrapper] ==== wrapper stdout END ====
[2025-07-27 03:51:49] 2025-07-27 07:51:48,916 [wrapper] ==== wrapper stderr END ====
[2025-07-27 03:51:49]  *** Error codes and diagnostics ***
[2025-07-27 03:51:49]     "exeErrorCode": 0,
[2025-07-27 03:51:49]     "exeErrorDiag": "",
[2025-07-27 03:51:49]     "pilotErrorCode": 0,
[2025-07-27 03:51:49]     "pilotErrorDiag": "",
[2025-07-27 03:51:49]  *** Listing of results directory ***
[2025-07-27 03:51:49] total 408732
[2025-07-27 03:51:49] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 20:36 pilot3.tar.gz
[2025-07-27 03:51:49] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 21:03 queuedata.json
[2025-07-27 03:51:49] -rwx------ 1 boincer umatlas     36292 Jul 26 21:05 runpilot2-wrapper.sh
[2025-07-27 03:51:49] -rw-r--r-- 1 boincer umatlas       100 Jul 27 02:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 03:51:49] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 02:15 run_atlas
[2025-07-27 03:51:49] -rw-r--r-- 1 boincer umatlas       105 Jul 27 02:15 job.xml
[2025-07-27 03:51:49] -rw-r--r-- 2 boincer umatlas 237499242 Jul 27 02:15 EVNT.45758390._000002.pool.root.1
[2025-07-27 03:51:49] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 02:15 start_atlas.sh
[2025-07-27 03:51:49] drwxrwx--x 2 boincer umatlas      4096 Jul 27 02:15 shared
[2025-07-27 03:51:49] -rw-r--r-- 2 boincer umatlas    542885 Jul 27 02:15 input.tar.gz
[2025-07-27 03:51:49] -rw-r--r-- 1 boincer umatlas         0 Jul 27 02:15 boinc_lockfile
[2025-07-27 03:51:49] -rw-r--r-- 1 boincer umatlas      2556 Jul 27 02:15 pandaJob.out
[2025-07-27 03:51:49] -rw------- 1 boincer umatlas    980109 Jul 27 02:15 agis_schedconf.cvmfs.json
[2025-07-27 03:51:49] -rw------- 1 boincer umatlas   1593052 Jul 27 02:15 agis_ddmendpoints.agis.ALL.json
[2025-07-27 03:51:49] drwx------ 4 boincer umatlas      4096 Jul 27 02:15 pilot3
[2025-07-27 03:51:49] -rw-r--r-- 1 boincer umatlas      5867 Jul 27 03:48 init_data.xml
[2025-07-27 03:51:49] -rw------- 1 boincer umatlas 175321625 Jul 27 03:50 HITS.45758392._000049.pool.root.1
[2025-07-27 03:51:49] -rw------- 1 boincer umatlas        95 Jul 27 03:51 pilot_heartbeat.json
[2025-07-27 03:51:49] -rw------- 1 boincer umatlas      1049 Jul 27 03:51 memory_monitor_summary.json
[2025-07-27 03:51:49] -rw-r--r-- 1 boincer umatlas       529 Jul 27 03:51 boinc_task_state.xml
[2025-07-27 03:51:49] -rw------- 1 boincer umatlas    388452 Jul 27 03:51 log.45758392._000049.job.log.tgz.1
[2025-07-27 03:51:49] -rw------- 1 boincer umatlas      7841 Jul 27 03:51 heartbeat.json
[2025-07-27 03:51:49] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 03:51 boinc_mmap_file
[2025-07-27 03:51:49] -rw-r--r-- 1 boincer umatlas        27 Jul 27 03:51 wrapper_checkpoint.txt
[2025-07-27 03:51:49] -rw------- 1 boincer umatlas       745 Jul 27 03:51 pilotlog.txt
[2025-07-27 03:51:49] -rw------- 1 boincer umatlas    535737 Jul 27 03:51 log.45758392._000049.job.log.1
[2025-07-27 03:51:49] -rw------- 1 boincer umatlas       357 Jul 27 03:51 output.list
[2025-07-27 03:51:49] -rw-r--r-- 1 boincer umatlas       620 Jul 27 03:51 runtime_log
[2025-07-27 03:51:49] -rw------- 1 boincer umatlas    942080 Jul 27 03:51 result.tar.gz
[2025-07-27 03:51:49] -rw-r--r-- 1 boincer umatlas      8662 Jul 27 03:51 runtime_log.err
[2025-07-27 03:51:49] -rw------- 1 boincer umatlas       659 Jul 27 03:51 K2PMDmE04z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtkTLDmWJO9Wn.diag
[2025-07-27 03:51:49] -rw-r--r-- 1 boincer umatlas     21662 Jul 27 03:51 stderr.txt
[2025-07-27 03:51:49] HITS file was successfully produced:
[2025-07-27 03:51:49] -rw------- 1 boincer umatlas 175321625 Jul 27 03:50 shared/HITS.pool.root.1
[2025-07-27 03:51:49]  *** Contents of shared directory: ***
[2025-07-27 03:51:49] total 404624
[2025-07-27 03:51:49] -rw-r--r-- 2 boincer umatlas 237499242 Jul 27 02:15 ATLAS.root_0
[2025-07-27 03:51:49] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 02:15 start_atlas.sh
[2025-07-27 03:51:49] -rw-r--r-- 2 boincer umatlas    542885 Jul 27 02:15 input.tar.gz
[2025-07-27 03:51:49] -rw------- 1 boincer umatlas 175321625 Jul 27 03:50 HITS.pool.root.1
[2025-07-27 03:51:49] -rw------- 1 boincer umatlas    942080 Jul 27 03:51 result.tar.gz
03:51:50 (13682): run_atlas exited; CPU time 63730.106087
03:51:50 (13682): called boinc_finish(0)

</stderr_txt>
]]>

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