Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:45:07 (1157601): wrapper (7.7.26015): starting
03:45:07 (1157601): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 03:45:07] Arguments: --nthreads 12
[2025-07-27 03:45:07] Threads: 12
[2025-07-27 03:45:07] Checking for CVMFS
[2025-07-27 03:45:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 03:45:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 03:45:07] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 03:45:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 03:45:07] 2.12.6.0 1263230 18081 332684 148804 1 216 21977223 32935936 6828 16776704 0 35390393 99.607 56709650 29260 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 03:45:07] CVMFS is ok
[2025-07-27 03:45:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 03:45:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 03:45:07] Further information can be found at the LHC@home message board.
[2025-07-27 03:45:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 03:45:07] Checking for apptainer binary...
[2025-07-27 03:45:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 03:45:07] Running /usr/bin/apptainer --version
[2025-07-27 03:45:07] apptainer version 1.4.1-1.el9
[2025-07-27 03:45:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 03:45:08] c6-5-7-2.aglt2.org
[2025-07-27 03:45:08] apptainer works
[2025-07-27 03:45:08] Set ATHENA_PROC_NUMBER=12
[2025-07-27 03:45:08] Set ATHENA_CORE_NUMBER=12
[2025-07-27 03:45:08] Starting ATLAS job with PandaID=6745938988
[2025-07-27 03:45:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 05:12:56]  *** The last 200 lines of the pilot log: ***
[2025-07-27 05:12:56]  is_altstaged=None
[2025-07-27 05:12:56]  is_tar=False
[2025-07-27 05:12:56]  lfn=log.45758392._000041.job.log.tgz.1
[2025-07-27 05:12:56]  mtime=0
[2025-07-27 05:12:56]  protocol_id=None
[2025-07-27 05:12:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 05:12:56]  replicas=None
[2025-07-27 05:12:56]  scope=mc23_13p6TeV
[2025-07-27 05:12:56]  status=None
[2025-07-27 05:12:56]  status_code=0
[2025-07-27 05:12:56]  storage_token=
[2025-07-27 05:12:56]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745938988/log.45758392._000041.job.log.tgz.1
[2025-07-27 05:12:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a4/37/log.45758392._000041.job.log.tgz.1
[2025-07-27 05:12:56]  workdir=None
[2025-07-27 05:12:56] ]
[2025-07-27 05:12:56] 2025-07-27 09:12:18,939 | INFO     | transferring file log.45758392._000041.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745938988/log.45758392._000041.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 05:12:56] 2025-07-27 09:12:18,940 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745938988/log.45758392._000041.job.log.tgz.1 /tmp/boinchome/slots/0/log.45758392._000041.job
[2025-07-27 05:12:56] 2025-07-27 09:12:18,962 | INFO     | adding to output.list: log.45758392._000041.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a4/37/log.45758392._000041.job.log.tg
[2025-07-27 05:12:56] 2025-07-27 09:12:18,963 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 05:12:56] 2025-07-27 09:12:18,963 | INFO     | summary of transferred files:
[2025-07-27 05:12:56] 2025-07-27 09:12:18,963 | INFO     |  -- lfn=log.45758392._000041.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 05:12:56] 2025-07-27 09:12:18,963 | INFO     | stage-out finished correctly
[2025-07-27 05:12:56] 2025-07-27 09:12:19,060 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 05:12:56] 2025-07-27 09:12:19,739 | INFO     | job 6745938988 has state=finished
[2025-07-27 05:12:56] 2025-07-27 09:12:19,739 | INFO     | preparing for final server update for job 6745938988 in state='finished'
[2025-07-27 05:12:56] 2025-07-27 09:12:19,739 | INFO     | this job has now completed (state=finished)
[2025-07-27 05:12:56] 2025-07-27 09:12:19,740 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 05:12:56] 2025-07-27 09:12:19,740 | INFO     | log transfer has been attempted: DONE
[2025-07-27 05:12:56] 2025-07-27 09:12:19,740 | INFO     | job 6745938988 has finished - writing final server update
[2025-07-27 05:12:56] 2025-07-27 09:12:19,740 | INFO     | total number of processed events: 400 (read)
[2025-07-27 05:12:56] 2025-07-27 09:12:19,741 | INFO     | executing command: lscpu
[2025-07-27 05:12:56] 2025-07-27 09:12:19,798 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 05:12:56] 2025-07-27 09:12:20,648 | INFO     | monitor loop #384: job 0:6745938988 is in state 'finished'
[2025-07-27 05:12:56] 2025-07-27 09:12:20,648 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 05:12:56] 2025-07-27 09:12:23,150 | INFO     | monitor loop #385: job 0:6745938988 is in state 'finished'
[2025-07-27 05:12:56] 2025-07-27 09:12:23,151 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 05:12:56] 2025-07-27 09:12:24,522 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 05:12:56] 2025-07-27 09:12:24,529 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2790.0506071428567
[2025-07-27 05:12:56] 2025-07-27 09:12:24,539 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745938988/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 05:12:56] 2025-07-27 09:12:24,539 | INFO     | extracted standard info from prmon json
[2025-07-27 05:12:56] 2025-07-27 09:12:24,540 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 05:12:56] 2025-07-27 09:12:24,540 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 05:12:56] 2025-07-27 09:12:24,540 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 05:12:56] 2025-07-27 09:12:24,541 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 05:12:56] 2025-07-27 09:12:24,543 | INFO     | fitting pss+swap vs Time
[2025-07-27 05:12:56] 2025-07-27 09:12:24,543 | INFO     | sum of square deviations: 147126479.5
[2025-07-27 05:12:56] 2025-07-27 09:12:24,544 | INFO     | sum of deviations: -11526776977.0
[2025-07-27 05:12:56] 2025-07-27 09:12:24,544 | INFO     | mean x: 1753605005.5
[2025-07-27 05:12:56] 2025-07-27 09:12:24,544 | INFO     | mean y: 2504292.923076923
[2025-07-27 05:12:56] 2025-07-27 09:12:24,544 | INFO     | -- intersect: 137390511352.17824
[2025-07-27 05:12:56] 2025-07-27 09:12:24,545 | INFO     | intersect: 137390511352.17824
[2025-07-27 05:12:56] 2025-07-27 09:12:24,545 | INFO     | chi2: 0.17141743574397564
[2025-07-27 05:12:56] 2025-07-27 09:12:24,545 | INFO     | -- intersect: 137390511352.17824
[2025-07-27 05:12:56] 2025-07-27 09:12:24,545 | INFO     | current memory leak: -78.35 B/s (using 78 data points, chi2=0.17)
[2025-07-27 05:12:56] 2025-07-27 09:12:24,546 | INFO     | could have reported an average CPU frequency of 2847 MHz (6 samples)
[2025-07-27 05:12:56] 2025-07-27 09:12:24,546 | INFO     | ..............................
[2025-07-27 05:12:56] 2025-07-27 09:12:24,546 | INFO     | . Timing measurements:
[2025-07-27 05:12:56] 2025-07-27 09:12:24,546 | INFO     | . get job = 0 s
[2025-07-27 05:12:56] 2025-07-27 09:12:24,546 | INFO     | . initial setup = 2 s
[2025-07-27 05:12:56] 2025-07-27 09:12:24,546 | INFO     | . payload setup = 8 s
[2025-07-27 05:12:56] 2025-07-27 09:12:24,546 | INFO     | . stage-in = 0 s
[2025-07-27 05:12:56] 2025-07-27 09:12:24,547 | INFO     | . payload execution = 5187 s
[2025-07-27 05:12:56] 2025-07-27 09:12:24,547 | INFO     | . stage-out = 0 s
[2025-07-27 05:12:56] 2025-07-27 09:12:24,547 | INFO     | . log creation = 0 s
[2025-07-27 05:12:56] 2025-07-27 09:12:24,547 | INFO     | ..............................
[2025-07-27 05:12:56] 2025-07-27 09:12:24,638 | INFO     | 
[2025-07-27 05:12:56] 2025-07-27 09:12:24,639 | INFO     | job summary report
[2025-07-27 05:12:56] 2025-07-27 09:12:24,639 | INFO     | --------------------------------------------------
[2025-07-27 05:12:56] 2025-07-27 09:12:24,639 | INFO     | PanDA job id: 6745938988
[2025-07-27 05:12:56] 2025-07-27 09:12:24,639 | INFO     | task id: 45758392
[2025-07-27 05:12:56] 2025-07-27 09:12:24,639 | INFO     | errors: (none)
[2025-07-27 05:12:56] 2025-07-27 09:12:24,639 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 05:12:56] 2025-07-27 09:12:24,639 | INFO     | pilot state: finished 
[2025-07-27 05:12:56] 2025-07-27 09:12:24,639 | INFO     | transexitcode: 0
[2025-07-27 05:12:56] 2025-07-27 09:12:24,639 | INFO     | exeerrorcode: 0
[2025-07-27 05:12:56] 2025-07-27 09:12:24,639 | INFO     | exeerrordiag: 
[2025-07-27 05:12:56] 2025-07-27 09:12:24,640 | INFO     | exitcode: 0
[2025-07-27 05:12:56] 2025-07-27 09:12:24,640 | INFO     | exitmsg: OK
[2025-07-27 05:12:56] 2025-07-27 09:12:24,640 | INFO     | cpuconsumptiontime: 54080 s
[2025-07-27 05:12:56] 2025-07-27 09:12:24,640 | INFO     | nevents: 400
[2025-07-27 05:12:56] 2025-07-27 09:12:24,640 | INFO     | neventsw: 0
[2025-07-27 05:12:56] 2025-07-27 09:12:24,640 | INFO     | pid: 1169377
[2025-07-27 05:12:56] 2025-07-27 09:12:24,640 | INFO     | pgrp: 1169377
[2025-07-27 05:12:56] 2025-07-27 09:12:24,640 | INFO     | corecount: 12
[2025-07-27 05:12:56] 2025-07-27 09:12:24,640 | INFO     | event service: False
[2025-07-27 05:12:56] 2025-07-27 09:12:24,640 | INFO     | sizes: {0: 2397292, 1: 2397491, 6: 2397753, 11: 2397781, 5199: 2424049, 5200: 2424048, 5201: 2433286, 5207: 2433424}
[2025-07-27 05:12:56] 2025-07-27 09:12:24,640 | INFO     | --------------------------------------------------
[2025-07-27 05:12:56] 2025-07-27 09:12:24,640 | INFO     | 
[2025-07-27 05:12:56] 2025-07-27 09:12:24,641 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 05:12:56] 2025-07-27 09:12:24,662 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 05:12:56] 2025-07-27 09:12:24,663 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 05:12:56] 2025-07-27 09:12:24,663 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 05:12:56] 2025-07-27 09:12:24,663 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 05:12:56] 2025-07-27 09:12:24,663 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 05:12:56] 2025-07-27 09:12:24,663 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 05:12:56] 2025-07-27 09:12:24,663 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 05:12:56] 2025-07-27 09:12:24,663 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 05:12:56] 2025-07-27 09:12:24,663 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 05:12:56] 2025-07-27 09:12:24,663 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 05:12:56] 2025-07-27 09:12:24,663 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 05:12:56] 2025-07-27 09:12:24,664 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 05:12:56] 2025-07-27 09:12:24,664 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 05:12:56] 2025-07-27 09:12:24,664 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 05:12:56] 2025-07-27 09:12:24,664 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 05:12:56] 2025-07-27 09:12:24,664 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 05:12:56] 2025-07-27 09:12:24,664 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 05:12:56] 2025-07-27 09:12:24,664 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 05:12:56] 2025-07-27 09:12:24,664 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 05:12:56] 2025-07-27 09:12:24,664 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 05:12:56] 2025-07-27 09:12:24,664 | INFO     | job 6745938988 has completed (purged errors)
[2025-07-27 05:12:56] 2025-07-27 09:12:24,664 | INFO     | overall cleanup function is called
[2025-07-27 05:12:56] 2025-07-27 09:12:25,674 | INFO     | --- collectZombieJob: --- 10, [1169377]
[2025-07-27 05:12:56] 2025-07-27 09:12:25,674 | INFO     | zombie collector waiting for pid 1169377
[2025-07-27 05:12:56] 2025-07-27 09:12:25,674 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 05:12:56] 2025-07-27 09:12:25,674 | INFO     | collected zombie processes
[2025-07-27 05:12:56] 2025-07-27 09:12:25,675 | INFO     | will attempt to kill all subprocesses of pid=1169377
[2025-07-27 05:12:56] 2025-07-27 09:12:25,934 | INFO     | process IDs to be killed: [1169377] (in reverse order)
[2025-07-27 05:12:56] 2025-07-27 09:12:26,030 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 05:12:56] 2025-07-27 09:12:26,030 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 05:12:56] 2025-07-27 09:12:26,040 | INFO     | did not find any defunct processes belonging to 1169377
[2025-07-27 05:12:56] 2025-07-27 09:12:26,051 | INFO     | did not find any defunct processes belonging to 1169377
[2025-07-27 05:12:56] 2025-07-27 09:12:26,052 | INFO     | ready for new job
[2025-07-27 05:12:56] 2025-07-27 09:12:26,052 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 05:12:56] 2025-07-27 09:12:26,053 | INFO     | ***************************************
[2025-07-27 05:12:56] 2025-07-27 09:12:26,053 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 05:12:56] 2025-07-27 09:12:26,053 | INFO     | ***************************************
[2025-07-27 05:12:56] 2025-07-27 09:12:26,053 | INFO     | 
[2025-07-27 05:12:56] 2025-07-27 09:12:26,069 | INFO     | architecture information:
[2025-07-27 05:12:56] 2025-07-27 09:12:26,070 | INFO     | executing command: cat /etc/os-release
[2025-07-27 05:12:56] 2025-07-27 09:12:26,085 | INFO     | cat /etc/os-release:
[2025-07-27 05:12:56] NAME="CentOS Linux"
[2025-07-27 05:12:56] VERSION="7 (Core)"
[2025-07-27 05:12:56] ID="centos"
[2025-07-27 05:12:56] ID_LIKE="rhel fedora"
[2025-07-27 05:12:56] VERSION_ID="7"
[2025-07-27 05:12:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 05:12:56] ANSI_COLOR="0;31"
[2025-07-27 05:12:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 05:12:56] HOME_URL="https://www.centos.org/"
[2025-07-27 05:12:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 05:12:56] 
[2025-07-27 05:12:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 05:12:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 05:12:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 05:12:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 05:12:56] 
[2025-07-27 05:12:56] 2025-07-27 09:12:26,085 | INFO     | ***************************************
[2025-07-27 05:12:56] 2025-07-27 09:12:26,588 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 05:12:56] 2025-07-27 09:12:26,603 | INFO     | sufficient remaining disk space (76299632640 B)
[2025-07-27 05:12:56] 2025-07-27 09:12:26,603 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 05:12:56] 2025-07-27 09:12:26,604 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 05:12:56] 2025-07-27 09:12:26,604 | INFO     | update_server=False
[2025-07-27 05:12:56] 2025-07-27 09:12:26,604 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 05:12:56] 2025-07-27 09:12:26,604 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 05:12:56] 2025-07-27 09:12:26,658 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 05:12:56] 2025-07-27 09:12:26,659 | INFO     | aborting loop
[2025-07-27 05:12:56] 2025-07-27 09:12:26,678 | INFO     | all payload control threads have been joined
[2025-07-27 05:12:56] 2025-07-27 09:12:27,077 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 05:12:56] 2025-07-27 09:12:27,279 | INFO     | all job control threads have been joined
[2025-07-27 05:12:56] 2025-07-27 09:12:27,609 | INFO     | [job] queue monitor thread has finished
[2025-07-27 05:12:56] 2025-07-27 09:12:27,610 | INFO     | [job] retrieve thread has finished
[2025-07-27 05:12:56] 2025-07-27 09:12:27,664 | INFO     | [job] job monitor thread has finished
[2025-07-27 05:12:56] 2025-07-27 09:12:27,681 | INFO     | all data control threads have been joined
[2025-07-27 05:12:56] 2025-07-27 09:12:27,683 | INFO     | [payload] control thread has finished
[2025-07-27 05:12:56] 2025-07-27 09:12:28,190 | INFO     | [job] validate thread has finished
[2025-07-27 05:12:56] 2025-07-27 09:12:28,221 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 05:12:56] 2025-07-27 09:12:28,285 | INFO     | [job] control thread has finished
[2025-07-27 05:12:56] 2025-07-27 09:12:28,289 | INFO     | [payload] failed_post thread has finished
[2025-07-27 05:12:56] 2025-07-27 09:12:28,502 | INFO     | [payload] validate_post thread has finished
[2025-07-27 05:12:56] 2025-07-27 09:12:28,686 | INFO     | [data] control thread has finished
[2025-07-27 05:12:56] 2025-07-27 09:12:28,839 | INFO     | [data] copytool_in thread has finished
[2025-07-27 05:12:56] 2025-07-27 09:12:28,842 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 05:12:56] 2025-07-27 09:12:28,843 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 05:12:56] 2025-07-27 09:12:29,082 | INFO     | [data] copytool_out thread has finished
[2025-07-27 05:12:56] 2025-07-27 09:12:29,651 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 05:12:56] 2025-07-27 09:12:33,657 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 05:12:56] 2025-07-27 09:12:37,154 | INFO     | job.realtimelogging is not enabled
[2025-07-27 05:12:56] 2025-07-27 09:12:38,159 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 05:12:56] 2025-07-27 09:12:40,027 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140658678994752)>', '<ExcThread(monitor, started 140658333431552)>']
[2025-07-27 05:12:56] 2025-07-27 09:12:45,053 | INFO     | all workflow threads have been joined
[2025-07-27 05:12:56] 2025-07-27 09:12:45,053 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 05:12:56] 2025-07-27 09:12:45,053 | INFO     | traces error code: 0
[2025-07-27 05:12:56] 2025-07-27 09:12:45,054 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 05:12:56] 2025-07-27 09:12:56,618 | INFO     | PID=1162161 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 05:12:56] 2025-07-27 09:12:56,619 | INFO     | .. there are 8 such processes running
[2025-07-27 05:12:56] 2025-07-27 09:12:56,619 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 05:12:56] 2025-07-27 09:12:56,619 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 05:12:56] 2025-07-27 09:12:56,619 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 05:12:56] 2025-07-27 09:12:56,619 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 05:12:56] 2025-07-27 09:12:56,619 | INFO     | [monitor] control thread has ended
[2025-07-27 05:12:56] 2025-07-27 09:12:56,770 [wrapper] ==== pilot stdout END ====
[2025-07-27 05:12:56] 2025-07-27 09:12:56,773 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 05:12:56] 2025-07-27 09:12:56,776 [wrapper] pilotpid: 1162161
[2025-07-27 05:12:56] 2025-07-27 09:12:56,779 [wrapper] Pilot exit status: 0
[2025-07-27 05:12:56] 2025-07-27 09:12:56,793 [wrapper] pandaids: 6745938988
[2025-07-27 05:12:56] 2025-07-27 09:12:56,859 [wrapper] cleanup supervisor_pilot 1518535 1162162
[2025-07-27 05:12:56] 2025-07-27 09:12:56,863 [wrapper] Test setup, not cleaning
[2025-07-27 05:12:56] 2025-07-27 09:12:56,868 [wrapper] apfmon messages muted
[2025-07-27 05:12:56] 2025-07-27 09:12:56,871 [wrapper] ==== wrapper stdout END ====
[2025-07-27 05:12:56] 2025-07-27 09:12:56,876 [wrapper] ==== wrapper stderr END ====
[2025-07-27 05:12:56]  *** Error codes and diagnostics ***
[2025-07-27 05:12:56]     "exeErrorCode": 0,
[2025-07-27 05:12:56]     "exeErrorDiag": "",
[2025-07-27 05:12:56]     "pilotErrorCode": 0,
[2025-07-27 05:12:56]     "pilotErrorDiag": "",
[2025-07-27 05:12:56]  *** Listing of results directory ***
[2025-07-27 05:12:56] total 408436
[2025-07-27 05:12:56] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 20:36 pilot3.tar.gz
[2025-07-27 05:12:56] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 21:03 queuedata.json
[2025-07-27 05:12:56] -rwx------. 1 boincer umatlas     36292 Jul 26 21:05 runpilot2-wrapper.sh
[2025-07-27 05:12:56] -rw-r--r--. 1 boincer umatlas       100 Jul 27 03:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 05:12:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 03:45 run_atlas
[2025-07-27 05:12:56] -rw-r--r--. 1 boincer umatlas       105 Jul 27 03:45 job.xml
[2025-07-27 05:12:56] -rw-r--r--. 2 boincer umatlas 237499242 Jul 27 03:45 EVNT.45758390._000002.pool.root.1
[2025-07-27 05:12:56] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 03:45 start_atlas.sh
[2025-07-27 05:12:56] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 03:45 shared
[2025-07-27 05:12:56] -rw-r--r--. 2 boincer umatlas    542884 Jul 27 03:45 input.tar.gz
[2025-07-27 05:12:56] -rw-r--r--. 1 boincer umatlas         0 Jul 27 03:45 boinc_lockfile
[2025-07-27 05:12:56] -rw-r--r--. 1 boincer umatlas      2556 Jul 27 03:45 pandaJob.out
[2025-07-27 05:12:56] -rw-------. 1 boincer umatlas    980125 Jul 27 03:45 agis_schedconf.cvmfs.json
[2025-07-27 05:12:56] -rw-------. 1 boincer umatlas   1593052 Jul 27 03:45 agis_ddmendpoints.agis.ALL.json
[2025-07-27 05:12:56] drwx------. 4 boincer umatlas      4096 Jul 27 03:45 pilot3
[2025-07-27 05:12:56] -rw-r--r--. 1 boincer umatlas      6841 Jul 27 05:11 init_data.xml
[2025-07-27 05:12:56] -rw-------. 1 boincer umatlas 175095977 Jul 27 05:11 HITS.45758392._000041.pool.root.1
[2025-07-27 05:12:56] -rw-r--r--. 1 boincer umatlas       530 Jul 27 05:11 boinc_task_state.xml
[2025-07-27 05:12:56] -rw-------. 1 boincer umatlas        95 Jul 27 05:12 pilot_heartbeat.json
[2025-07-27 05:12:56] -rw-------. 1 boincer umatlas      1039 Jul 27 05:12 memory_monitor_summary.json
[2025-07-27 05:12:56] -rw-------. 1 boincer umatlas    375682 Jul 27 05:12 log.45758392._000041.job.log.tgz.1
[2025-07-27 05:12:56] -rw-------. 1 boincer umatlas      7815 Jul 27 05:12 heartbeat.json
[2025-07-27 05:12:56] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 05:12 boinc_mmap_file
[2025-07-27 05:12:56] -rw-r--r--. 1 boincer umatlas        27 Jul 27 05:12 wrapper_checkpoint.txt
[2025-07-27 05:12:56] -rw-------. 1 boincer umatlas       822 Jul 27 05:12 pilotlog.txt
[2025-07-27 05:12:56] -rw-------. 1 boincer umatlas    509840 Jul 27 05:12 log.45758392._000041.job.log.1
[2025-07-27 05:12:56] -rw-------. 1 boincer umatlas       357 Jul 27 05:12 output.list
[2025-07-27 05:12:56] -rw-r--r--. 1 boincer umatlas       620 Jul 27 05:12 runtime_log
[2025-07-27 05:12:56] -rw-------. 1 boincer umatlas    901120 Jul 27 05:12 result.tar.gz
[2025-07-27 05:12:56] -rw-------. 1 boincer umatlas       655 Jul 27 05:12 seCMDmE04z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlkTLDmHEfjon.diag
[2025-07-27 05:12:56] -rw-r--r--. 1 boincer umatlas      8662 Jul 27 05:12 runtime_log.err
[2025-07-27 05:12:56] -rw-r--r--. 1 boincer umatlas     21494 Jul 27 05:12 stderr.txt
[2025-07-27 05:12:56] HITS file was successfully produced:
[2025-07-27 05:12:56] -rw-------. 1 boincer umatlas 175095977 Jul 27 05:11 shared/HITS.pool.root.1
[2025-07-27 05:12:56]  *** Contents of shared directory: ***
[2025-07-27 05:12:56] total 404364
[2025-07-27 05:12:56] -rw-r--r--. 2 boincer umatlas 237499242 Jul 27 03:45 ATLAS.root_0
[2025-07-27 05:12:56] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 03:45 start_atlas.sh
[2025-07-27 05:12:56] -rw-r--r--. 2 boincer umatlas    542884 Jul 27 03:45 input.tar.gz
[2025-07-27 05:12:56] -rw-------. 1 boincer umatlas 175095977 Jul 27 05:11 HITS.pool.root.1
[2025-07-27 05:12:56] -rw-------. 1 boincer umatlas    901120 Jul 27 05:12 result.tar.gz
05:12:58 (1157601): run_atlas exited; CPU time 54153.813025
05:12:58 (1157601): called boinc_finish(0)

</stderr_txt>
]]>

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