Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:38:27 (1125629): wrapper (7.7.26015): starting
03:38:27 (1125629): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 03:38:27] Arguments: --nthreads 12
[2025-07-27 03:38:27] Threads: 12
[2025-07-27 03:38:27] Checking for CVMFS
[2025-07-27 03:38:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 03:38:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 03:38:27] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 03:38:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 03:38:28] 2.12.6.0 418423 18075 317472 148804 3 217 21720185 32935936 8300 16776704 0 32267365 99.647 53278686 33463 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 03:38:28] CVMFS is ok
[2025-07-27 03:38:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 03:38:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 03:38:28] Further information can be found at the LHC@home message board.
[2025-07-27 03:38:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 03:38:28] Checking for apptainer binary...
[2025-07-27 03:38:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 03:38:28] Running /usr/bin/apptainer --version
[2025-07-27 03:38:28] apptainer version 1.4.1-1.el9
[2025-07-27 03:38:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 03:38:28] c6-1-26-2.aglt2.org
[2025-07-27 03:38:28] apptainer works
[2025-07-27 03:38:28] Set ATHENA_PROC_NUMBER=12
[2025-07-27 03:38:28] Set ATHENA_CORE_NUMBER=12
[2025-07-27 03:38:28] Starting ATLAS job with PandaID=6745925302
[2025-07-27 03:38:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 04:52:04]  *** The last 200 lines of the pilot log: ***
[2025-07-27 04:52:04]  protocol_id=None
[2025-07-27 04:52:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 04:52:04]  replicas=None
[2025-07-27 04:52:04]  scope=mc23_13p6TeV
[2025-07-27 04:52:04]  status=None
[2025-07-27 04:52:04]  status_code=0
[2025-07-27 04:52:04]  storage_token=
[2025-07-27 04:52:04]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745925302/log.45758730._000109.job.log.tgz.1
[2025-07-27 04:52:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e1/68/log.45758730._000109.job.log.tgz.1
[2025-07-27 04:52:04]  workdir=None
[2025-07-27 04:52:04] ]
[2025-07-27 04:52:04] 2025-07-27 08:51:22,904 | INFO     | transferring file log.45758730._000109.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745925302/log.45758730._000109.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 04:52:04] 2025-07-27 08:51:22,904 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745925302/log.45758730._000109.job.log.tgz.1 /tmp/boinchome/slots/0/log.45758730._000109.job
[2025-07-27 04:52:04] 2025-07-27 08:51:22,923 | INFO     | adding to output.list: log.45758730._000109.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e1/68/log.45758730._000109.job.log.tg
[2025-07-27 04:52:04] 2025-07-27 08:51:22,924 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 04:52:04] 2025-07-27 08:51:22,924 | INFO     | summary of transferred files:
[2025-07-27 04:52:04] 2025-07-27 08:51:22,924 | INFO     |  -- lfn=log.45758730._000109.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 04:52:04] 2025-07-27 08:51:22,925 | INFO     | stage-out finished correctly
[2025-07-27 04:52:04] 2025-07-27 08:51:23,008 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 04:52:04] 2025-07-27 08:51:25,444 | WARNING  | process 1137129 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 04:52:04] 2025-07-27 08:51:25,444 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745925302/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 04:52:04] 2025-07-27 08:51:25,675 | INFO     | number of running child processes to parent process 1137129: 1
[2025-07-27 04:52:04] 2025-07-27 08:51:25,676 | INFO     | maximum number of monitored processes: 6
[2025-07-27 04:52:04] 2025-07-27 08:51:25,905 | INFO     | job 6745925302 has state=finished
[2025-07-27 04:52:04] 2025-07-27 08:51:25,906 | INFO     | preparing for final server update for job 6745925302 in state='finished'
[2025-07-27 04:52:04] 2025-07-27 08:51:25,906 | INFO     | this job has now completed (state=finished)
[2025-07-27 04:52:04] 2025-07-27 08:51:25,906 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 04:52:04] 2025-07-27 08:51:25,906 | INFO     | log transfer has been attempted: DONE
[2025-07-27 04:52:04] 2025-07-27 08:51:25,907 | INFO     | job 6745925302 has finished - writing final server update
[2025-07-27 04:52:04] 2025-07-27 08:51:25,907 | INFO     | total number of processed events: 400 (read)
[2025-07-27 04:52:04] 2025-07-27 08:51:25,908 | INFO     | executing command: lscpu
[2025-07-27 04:52:04] 2025-07-27 08:51:25,953 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 04:52:04] 2025-07-27 08:51:28,178 | INFO     | monitor loop #325: job 0:6745925302 is in state 'finished'
[2025-07-27 04:52:04] 2025-07-27 08:51:28,179 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 04:52:04] 2025-07-27 08:51:30,682 | INFO     | monitor loop #326: job 0:6745925302 is in state 'finished'
[2025-07-27 04:52:04] 2025-07-27 08:51:30,682 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 04:52:04] 2025-07-27 08:51:31,190 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 04:52:04] 2025-07-27 08:51:31,206 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2657.2870892857136
[2025-07-27 04:52:04] 2025-07-27 08:51:31,217 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745925302/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 04:52:04] 2025-07-27 08:51:31,218 | INFO     | extracted standard info from prmon json
[2025-07-27 04:52:04] 2025-07-27 08:51:31,218 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 04:52:04] 2025-07-27 08:51:31,218 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 04:52:04] 2025-07-27 08:51:31,219 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 04:52:04] 2025-07-27 08:51:31,219 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 04:52:04] 2025-07-27 08:51:31,221 | INFO     | fitting pss+swap vs Time
[2025-07-27 04:52:04] 2025-07-27 08:51:31,221 | INFO     | sum of square deviations: 81266640.0
[2025-07-27 04:52:04] 2025-07-27 08:51:31,222 | INFO     | sum of deviations: -10545165221.0
[2025-07-27 04:52:04] 2025-07-27 08:51:31,222 | INFO     | mean x: 1753604174.5
[2025-07-27 04:52:04] 2025-07-27 08:51:31,222 | INFO     | mean y: 2555961.9375
[2025-07-27 04:52:04] 2025-07-27 08:51:31,222 | INFO     | -- intersect: 227550363430.51025
[2025-07-27 04:52:04] 2025-07-27 08:51:31,223 | INFO     | intersect: 227550363430.51025
[2025-07-27 04:52:04] 2025-07-27 08:51:31,223 | INFO     | chi2: 0.10949820295411831
[2025-07-27 04:52:04] 2025-07-27 08:51:31,223 | INFO     | -- intersect: 227550363430.51025
[2025-07-27 04:52:04] 2025-07-27 08:51:31,223 | INFO     | current memory leak: -129.76 B/s (using 64 data points, chi2=0.11)
[2025-07-27 04:52:04] 2025-07-27 08:51:31,223 | INFO     | could have reported an average CPU frequency of 2657 MHz (6 samples)
[2025-07-27 04:52:04] 2025-07-27 08:51:31,224 | INFO     | ..............................
[2025-07-27 04:52:04] 2025-07-27 08:51:31,224 | INFO     | . Timing measurements:
[2025-07-27 04:52:04] 2025-07-27 08:51:31,224 | INFO     | . get job = 0 s
[2025-07-27 04:52:04] 2025-07-27 08:51:31,224 | INFO     | . initial setup = 2 s
[2025-07-27 04:52:04] 2025-07-27 08:51:31,224 | INFO     | . payload setup = 7 s
[2025-07-27 04:52:04] 2025-07-27 08:51:31,224 | INFO     | . stage-in = 0 s
[2025-07-27 04:52:04] 2025-07-27 08:51:31,224 | INFO     | . payload execution = 4334 s
[2025-07-27 04:52:04] 2025-07-27 08:51:31,224 | INFO     | . stage-out = 0 s
[2025-07-27 04:52:04] 2025-07-27 08:51:31,224 | INFO     | . log creation = 0 s
[2025-07-27 04:52:04] 2025-07-27 08:51:31,224 | INFO     | ..............................
[2025-07-27 04:52:04] 2025-07-27 08:51:31,355 | INFO     | 
[2025-07-27 04:52:04] 2025-07-27 08:51:31,355 | INFO     | job summary report
[2025-07-27 04:52:04] 2025-07-27 08:51:31,355 | INFO     | --------------------------------------------------
[2025-07-27 04:52:04] 2025-07-27 08:51:31,355 | INFO     | PanDA job id: 6745925302
[2025-07-27 04:52:04] 2025-07-27 08:51:31,355 | INFO     | task id: 45758730
[2025-07-27 04:52:04] 2025-07-27 08:51:31,356 | INFO     | errors: (none)
[2025-07-27 04:52:04] 2025-07-27 08:51:31,356 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 04:52:04] 2025-07-27 08:51:31,356 | INFO     | pilot state: finished 
[2025-07-27 04:52:04] 2025-07-27 08:51:31,356 | INFO     | transexitcode: 0
[2025-07-27 04:52:04] 2025-07-27 08:51:31,356 | INFO     | exeerrorcode: 0
[2025-07-27 04:52:04] 2025-07-27 08:51:31,356 | INFO     | exeerrordiag: 
[2025-07-27 04:52:04] 2025-07-27 08:51:31,356 | INFO     | exitcode: 0
[2025-07-27 04:52:04] 2025-07-27 08:51:31,356 | INFO     | exitmsg: OK
[2025-07-27 04:52:04] 2025-07-27 08:51:31,356 | INFO     | cpuconsumptiontime: 46994 s
[2025-07-27 04:52:04] 2025-07-27 08:51:31,356 | INFO     | nevents: 400
[2025-07-27 04:52:04] 2025-07-27 08:51:31,356 | INFO     | neventsw: 0
[2025-07-27 04:52:04] 2025-07-27 08:51:31,357 | INFO     | pid: 1137129
[2025-07-27 04:52:04] 2025-07-27 08:51:31,357 | INFO     | pgrp: 1137129
[2025-07-27 04:52:04] 2025-07-27 08:51:31,357 | INFO     | corecount: 12
[2025-07-27 04:52:04] 2025-07-27 08:51:31,357 | INFO     | event service: False
[2025-07-27 04:52:04] 2025-07-27 08:51:31,357 | INFO     | sizes: {0: 2397306, 1: 2397505, 5: 2397767, 11: 2397823, 4345: 2423841, 4347: 2433023, 4355: 2433161}
[2025-07-27 04:52:04] 2025-07-27 08:51:31,357 | INFO     | --------------------------------------------------
[2025-07-27 04:52:04] 2025-07-27 08:51:31,357 | INFO     | 
[2025-07-27 04:52:04] 2025-07-27 08:51:31,357 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 04:52:04] 2025-07-27 08:51:31,382 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 04:52:04] 2025-07-27 08:51:31,382 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 04:52:04] 2025-07-27 08:51:31,382 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 04:52:04] 2025-07-27 08:51:31,382 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 04:52:04] 2025-07-27 08:51:31,384 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 04:52:04] 2025-07-27 08:51:31,384 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 04:52:04] 2025-07-27 08:51:31,384 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 04:52:04] 2025-07-27 08:51:31,384 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 04:52:04] 2025-07-27 08:51:31,384 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 04:52:04] 2025-07-27 08:51:31,385 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 04:52:04] 2025-07-27 08:51:31,385 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 04:52:04] 2025-07-27 08:51:31,385 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 04:52:04] 2025-07-27 08:51:31,385 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 04:52:04] 2025-07-27 08:51:31,385 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 04:52:04] 2025-07-27 08:51:31,385 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 04:52:04] 2025-07-27 08:51:31,385 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 04:52:04] 2025-07-27 08:51:31,385 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 04:52:04] 2025-07-27 08:51:31,385 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 04:52:04] 2025-07-27 08:51:31,385 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 04:52:04] 2025-07-27 08:51:31,385 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 04:52:04] 2025-07-27 08:51:31,385 | INFO     | job 6745925302 has completed (purged errors)
[2025-07-27 04:52:04] 2025-07-27 08:51:31,386 | INFO     | overall cleanup function is called
[2025-07-27 04:52:04] 2025-07-27 08:51:32,393 | INFO     | --- collectZombieJob: --- 10, [1137129]
[2025-07-27 04:52:04] 2025-07-27 08:51:32,393 | INFO     | zombie collector waiting for pid 1137129
[2025-07-27 04:52:04] 2025-07-27 08:51:32,393 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 04:52:04] 2025-07-27 08:51:32,393 | INFO     | collected zombie processes
[2025-07-27 04:52:04] 2025-07-27 08:51:32,393 | INFO     | will attempt to kill all subprocesses of pid=1137129
[2025-07-27 04:52:04] 2025-07-27 08:51:32,617 | INFO     | process IDs to be killed: [1137129] (in reverse order)
[2025-07-27 04:52:04] 2025-07-27 08:51:32,723 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 04:52:04] 2025-07-27 08:51:32,724 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 04:52:04] 2025-07-27 08:51:32,737 | INFO     | did not find any defunct processes belonging to 1137129
[2025-07-27 04:52:04] 2025-07-27 08:51:32,751 | INFO     | did not find any defunct processes belonging to 1137129
[2025-07-27 04:52:04] 2025-07-27 08:51:32,751 | INFO     | ready for new job
[2025-07-27 04:52:04] 2025-07-27 08:51:32,752 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 04:52:04] 2025-07-27 08:51:32,753 | INFO     | ***************************************
[2025-07-27 04:52:04] 2025-07-27 08:51:32,754 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 04:52:04] 2025-07-27 08:51:32,754 | INFO     | ***************************************
[2025-07-27 04:52:04] 2025-07-27 08:51:32,754 | INFO     | 
[2025-07-27 04:52:04] 2025-07-27 08:51:32,770 | INFO     | architecture information:
[2025-07-27 04:52:04] 2025-07-27 08:51:32,770 | INFO     | executing command: cat /etc/os-release
[2025-07-27 04:52:04] 2025-07-27 08:51:32,789 | INFO     | cat /etc/os-release:
[2025-07-27 04:52:04] NAME="CentOS Linux"
[2025-07-27 04:52:04] VERSION="7 (Core)"
[2025-07-27 04:52:04] ID="centos"
[2025-07-27 04:52:04] ID_LIKE="rhel fedora"
[2025-07-27 04:52:04] VERSION_ID="7"
[2025-07-27 04:52:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 04:52:04] ANSI_COLOR="0;31"
[2025-07-27 04:52:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 04:52:04] HOME_URL="https://www.centos.org/"
[2025-07-27 04:52:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 04:52:04] 
[2025-07-27 04:52:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 04:52:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 04:52:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 04:52:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 04:52:04] 
[2025-07-27 04:52:04] 2025-07-27 08:51:32,789 | INFO     | ***************************************
[2025-07-27 04:52:04] 2025-07-27 08:51:33,292 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 04:52:04] 2025-07-27 08:51:33,311 | INFO     | sufficient remaining disk space (76272369664 B)
[2025-07-27 04:52:04] 2025-07-27 08:51:33,312 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 04:52:04] 2025-07-27 08:51:33,312 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 04:52:04] 2025-07-27 08:51:33,312 | INFO     | update_server=False
[2025-07-27 04:52:04] 2025-07-27 08:51:33,312 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 04:52:04] 2025-07-27 08:51:33,313 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 04:52:04] 2025-07-27 08:51:33,520 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 04:52:04] 2025-07-27 08:51:33,634 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 04:52:04] 2025-07-27 08:51:33,640 | INFO     | all data control threads have been joined
[2025-07-27 04:52:04] 2025-07-27 08:51:34,072 | INFO     | all job control threads have been joined
[2025-07-27 04:52:04] 2025-07-27 08:51:34,191 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 04:52:04] 2025-07-27 08:51:34,191 | INFO     | aborting loop
[2025-07-27 04:52:04] 2025-07-27 08:51:34,317 | INFO     | [job] retrieve thread has finished
[2025-07-27 04:52:04] 2025-07-27 08:51:34,318 | INFO     | [job] queue monitor thread has finished
[2025-07-27 04:52:04] 2025-07-27 08:51:34,441 | INFO     | all payload control threads have been joined
[2025-07-27 04:52:04] 2025-07-27 08:51:34,461 | INFO     | [payload] failed_post thread has finished
[2025-07-27 04:52:04] 2025-07-27 08:51:34,645 | INFO     | [data] control thread has finished
[2025-07-27 04:52:04] 2025-07-27 08:51:35,058 | INFO     | [job] validate thread has finished
[2025-07-27 04:52:04] 2025-07-27 08:51:35,077 | INFO     | [job] control thread has finished
[2025-07-27 04:52:04] 2025-07-27 08:51:35,114 | INFO     | [payload] validate_post thread has finished
[2025-07-27 04:52:04] 2025-07-27 08:51:35,196 | INFO     | [job] job monitor thread has finished
[2025-07-27 04:52:04] 2025-07-27 08:51:35,297 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 04:52:04] 2025-07-27 08:51:35,446 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 04:52:04] 2025-07-27 08:51:35,446 | INFO     | [payload] control thread has finished
[2025-07-27 04:52:04] 2025-07-27 08:51:35,526 | INFO     | [data] copytool_out thread has finished
[2025-07-27 04:52:04] 2025-07-27 08:51:35,701 | INFO     | [data] copytool_in thread has finished
[2025-07-27 04:52:04] 2025-07-27 08:51:35,738 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 04:52:04] 2025-07-27 08:51:37,641 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 04:52:04] 2025-07-27 08:51:44,215 | INFO     | job.realtimelogging is not enabled
[2025-07-27 04:52:04] 2025-07-27 08:51:45,220 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 04:52:04] 2025-07-27 08:51:45,520 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139938607118144)>', '<ExcThread(monitor, started 139938121103104)>']
[2025-07-27 04:52:04] 2025-07-27 08:51:50,545 | INFO     | all workflow threads have been joined
[2025-07-27 04:52:04] 2025-07-27 08:51:50,545 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 04:52:04] 2025-07-27 08:51:50,546 | INFO     | traces error code: 0
[2025-07-27 04:52:04] 2025-07-27 08:51:50,546 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 04:52:04] 2025-07-27 08:52:03,907 | INFO     | PID=1130130 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 04:52:04] 2025-07-27 08:52:03,907 | INFO     | .. there are 9 such processes running
[2025-07-27 04:52:04] 2025-07-27 08:52:03,908 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 04:52:04] 2025-07-27 08:52:03,908 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 04:52:04] 2025-07-27 08:52:03,908 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 04:52:04] 2025-07-27 08:52:03,908 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 04:52:04] 2025-07-27 08:52:03,908 | INFO     | [monitor] control thread has ended
[2025-07-27 04:52:04] 2025-07-27 08:52:04,068 [wrapper] ==== pilot stdout END ====
[2025-07-27 04:52:04] 2025-07-27 08:52:04,073 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 04:52:04] 2025-07-27 08:52:04,076 [wrapper] pilotpid: 1130130
[2025-07-27 04:52:04] 2025-07-27 08:52:04,080 [wrapper] Pilot exit status: 0
[2025-07-27 04:52:04] 2025-07-27 08:52:04,097 [wrapper] pandaids: 6745925302
[2025-07-27 04:52:04] 2025-07-27 08:52:04,173 [wrapper] cleanup supervisor_pilot 1399761 1130131
[2025-07-27 04:52:04] 2025-07-27 08:52:04,177 [wrapper] Test setup, not cleaning
[2025-07-27 04:52:04] 2025-07-27 08:52:04,181 [wrapper] apfmon messages muted
[2025-07-27 04:52:04] 2025-07-27 08:52:04,186 [wrapper] ==== wrapper stdout END ====
[2025-07-27 04:52:04] 2025-07-27 08:52:04,190 [wrapper] ==== wrapper stderr END ====
[2025-07-27 04:52:04]  *** Error codes and diagnostics ***
[2025-07-27 04:52:04]     "exeErrorCode": 0,
[2025-07-27 04:52:04]     "exeErrorDiag": "",
[2025-07-27 04:52:04]     "pilotErrorCode": 0,
[2025-07-27 04:52:04]     "pilotErrorDiag": "",
[2025-07-27 04:52:04]  *** Listing of results directory ***
[2025-07-27 04:52:04] total 414292
[2025-07-27 04:52:04] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 20:36 pilot3.tar.gz
[2025-07-27 04:52:04] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 21:00 queuedata.json
[2025-07-27 04:52:04] -rwx------. 1 boincer umatlas     36292 Jul 26 21:01 runpilot2-wrapper.sh
[2025-07-27 04:52:04] -rw-r--r--. 1 boincer umatlas       100 Jul 27 03:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 04:52:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 03:38 run_atlas
[2025-07-27 04:52:04] -rw-r--r--. 1 boincer umatlas       105 Jul 27 03:38 job.xml
[2025-07-27 04:52:04] -rw-r--r--. 2 boincer umatlas 245334648 Jul 27 03:38 EVNT.45758728._000005.pool.root.1
[2025-07-27 04:52:04] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 03:38 start_atlas.sh
[2025-07-27 04:52:04] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 03:38 shared
[2025-07-27 04:52:04] -rw-r--r--. 2 boincer umatlas    542889 Jul 27 03:38 input.tar.gz
[2025-07-27 04:52:04] -rw-r--r--. 1 boincer umatlas         0 Jul 27 03:38 boinc_lockfile
[2025-07-27 04:52:04] -rw-r--r--. 1 boincer umatlas      2568 Jul 27 03:38 pandaJob.out
[2025-07-27 04:52:04] -rw-------. 1 boincer umatlas    980125 Jul 27 03:38 agis_schedconf.cvmfs.json
[2025-07-27 04:52:04] -rw-------. 1 boincer umatlas   1593052 Jul 27 03:38 agis_ddmendpoints.agis.ALL.json
[2025-07-27 04:52:04] drwx------. 4 boincer umatlas      4096 Jul 27 03:38 pilot3
[2025-07-27 04:52:04] -rw-r--r--. 1 boincer umatlas      6843 Jul 27 04:49 init_data.xml
[2025-07-27 04:52:04] -rw-------. 1 boincer umatlas 173421574 Jul 27 04:50 HITS.45758730._000109.pool.root.1
[2025-07-27 04:52:04] -rw-r--r--. 1 boincer umatlas       529 Jul 27 04:50 boinc_task_state.xml
[2025-07-27 04:52:04] -rw-------. 1 boincer umatlas        95 Jul 27 04:51 pilot_heartbeat.json
[2025-07-27 04:52:04] -rw-------. 1 boincer umatlas      1039 Jul 27 04:51 memory_monitor_summary.json
[2025-07-27 04:52:04] -rw-------. 1 boincer umatlas    360088 Jul 27 04:51 log.45758730._000109.job.log.tgz.1
[2025-07-27 04:52:04] -rw-------. 1 boincer umatlas      7820 Jul 27 04:51 heartbeat.json
[2025-07-27 04:52:04] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 04:51 boinc_mmap_file
[2025-07-27 04:52:04] -rw-r--r--. 1 boincer umatlas        27 Jul 27 04:51 wrapper_checkpoint.txt
[2025-07-27 04:52:04] -rw-------. 1 boincer umatlas       822 Jul 27 04:52 pilotlog.txt
[2025-07-27 04:52:04] -rw-------. 1 boincer umatlas    439700 Jul 27 04:52 log.45758730._000109.job.log.1
[2025-07-27 04:52:04] -rw-------. 1 boincer umatlas       357 Jul 27 04:52 output.list
[2025-07-27 04:52:04] -rw-r--r--. 1 boincer umatlas       620 Jul 27 04:52 runtime_log
[2025-07-27 04:52:04] -rw-------. 1 boincer umatlas    819200 Jul 27 04:52 result.tar.gz
[2025-07-27 04:52:04] -rw-------. 1 boincer umatlas       655 Jul 27 04:52 TlNKDmpw4z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTjTLDmFDOdYn.diag
[2025-07-27 04:52:04] -rw-r--r--. 1 boincer umatlas      8667 Jul 27 04:52 runtime_log.err
[2025-07-27 04:52:04] -rw-r--r--. 1 boincer umatlas     21824 Jul 27 04:52 stderr.txt
[2025-07-27 04:52:04] HITS file was successfully produced:
[2025-07-27 04:52:04] -rw-------. 1 boincer umatlas 173421574 Jul 27 04:50 shared/HITS.pool.root.1
[2025-07-27 04:52:04]  *** Contents of shared directory: ***
[2025-07-27 04:52:04] total 410304
[2025-07-27 04:52:04] -rw-r--r--. 2 boincer umatlas 245334648 Jul 27 03:38 ATLAS.root_0
[2025-07-27 04:52:04] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 03:38 start_atlas.sh
[2025-07-27 04:52:04] -rw-r--r--. 2 boincer umatlas    542889 Jul 27 03:38 input.tar.gz
[2025-07-27 04:52:04] -rw-------. 1 boincer umatlas 173421574 Jul 27 04:50 HITS.pool.root.1
[2025-07-27 04:52:04] -rw-------. 1 boincer umatlas    819200 Jul 27 04:52 result.tar.gz
04:52:05 (1125629): run_atlas exited; CPU time 47033.946668
04:52:05 (1125629): called boinc_finish(0)

</stderr_txt>
]]>

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