Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:49:14 (3130119): wrapper (7.7.26015): starting
13:49:14 (3130119): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 13:49:14] Arguments: --nthreads 12
[2025-07-27 13:49:14] Threads: 12
[2025-07-27 13:49:14] Checking for CVMFS
[2025-07-27 13:49:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 13:49:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 13:49:14] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 13:49:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 13:49:15] 2.13.1.0 95439 8635 100868 148811 0 57 2607050 4097025 0 130560 0 7147257 99.990 326071 6288 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-07-27 13:49:15] CVMFS is ok
[2025-07-27 13:49:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 13:49:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 13:49:15] Further information can be found at the LHC@home message board.
[2025-07-27 13:49:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 13:49:15] Checking for apptainer binary...
[2025-07-27 13:49:15] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-07-27 13:49:15] apptainer is not installed, using version from CVMFS
[2025-07-27 13:49:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 13:49:15] pckelar5.cern.ch
[2025-07-27 13:49:15] apptainer works
[2025-07-27 13:49:15] Set ATHENA_PROC_NUMBER=12
[2025-07-27 13:49:15] Set ATHENA_CORE_NUMBER=12
[2025-07-27 13:49:15] Starting ATLAS job with PandaID=6745938890
[2025-07-27 13:49:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 15:10:31]  *** The last 200 lines of the pilot log: ***
[2025-07-27 15:10:31]  is_tar=False
[2025-07-27 15:10:31]  lfn=log.45758332._000048.job.log.tgz.1
[2025-07-27 15:10:31]  mtime=0
[2025-07-27 15:10:31]  protocol_id=None
[2025-07-27 15:10:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 15:10:31]  replicas=None
[2025-07-27 15:10:31]  scope=mc23_13p6TeV
[2025-07-27 15:10:31]  status=None
[2025-07-27 15:10:31]  status_code=0
[2025-07-27 15:10:31]  storage_token=
[2025-07-27 15:10:31]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6745938890/log.45758332._000048.job.log.tgz.1
[2025-07-27 15:10:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/96/log.45758332._000048.job.log.tgz.1
[2025-07-27 15:10:31]  workdir=None
[2025-07-27 15:10:31] ]
[2025-07-27 15:10:31] 2025-07-27 13:10:04,234 | INFO     | transferring file log.45758332._000048.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6745938890/log.45758332._000048.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-27 15:10:31] 2025-07-27 13:10:04,234 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6745938890/log.45758332._000048.job.log.tgz.1 /var/lib/boinc/slots/0/log.45758332._000048.job
[2025-07-27 15:10:31] 2025-07-27 13:10:04,249 | INFO     | adding to output.list: log.45758332._000048.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/96/log.45758332._000048.job.log.tg
[2025-07-27 15:10:31] 2025-07-27 13:10:04,250 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 15:10:31] 2025-07-27 13:10:04,250 | INFO     | summary of transferred files:
[2025-07-27 15:10:31] 2025-07-27 13:10:04,250 | INFO     |  -- lfn=log.45758332._000048.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 15:10:31] 2025-07-27 13:10:04,250 | INFO     | stage-out finished correctly
[2025-07-27 15:10:31] 2025-07-27 13:10:05,605 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 15:10:31] 2025-07-27 13:10:05,661 | INFO     | monitor loop #362: job 0:6745938890 is in state 'finished'
[2025-07-27 15:10:31] 2025-07-27 13:10:05,662 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:10:31] 2025-07-27 13:10:08,170 | INFO     | monitor loop #363: job 0:6745938890 is in state 'finished'
[2025-07-27 15:10:31] 2025-07-27 13:10:08,170 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:10:31] 2025-07-27 13:10:08,226 | INFO     | job 6745938890 has state=finished
[2025-07-27 15:10:31] 2025-07-27 13:10:08,226 | INFO     | preparing for final server update for job 6745938890 in state='finished'
[2025-07-27 15:10:31] 2025-07-27 13:10:08,226 | INFO     | this job has now completed (state=finished)
[2025-07-27 15:10:31] 2025-07-27 13:10:08,226 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 15:10:31] 2025-07-27 13:10:08,227 | INFO     | log transfer has been attempted: DONE
[2025-07-27 15:10:31] 2025-07-27 13:10:08,227 | INFO     | job 6745938890 has finished - writing final server update
[2025-07-27 15:10:31] 2025-07-27 13:10:08,227 | INFO     | total number of processed events: 400 (read)
[2025-07-27 15:10:31] 2025-07-27 13:10:08,228 | INFO     | executing command: lscpu
[2025-07-27 15:10:31] 2025-07-27 13:10:08,246 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 15:10:31] 2025-07-27 13:10:10,673 | INFO     | monitor loop #364: job 0:6745938890 is in state 'finished'
[2025-07-27 15:10:31] 2025-07-27 13:10:10,673 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 15:10:31] 2025-07-27 13:10:12,388 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 15:10:31] 2025-07-27 13:10:12,390 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2606.673416666667
[2025-07-27 15:10:31] 2025-07-27 13:10:12,392 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6745938890/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 15:10:31] 2025-07-27 13:10:12,393 | INFO     | extracted standard info from prmon json
[2025-07-27 15:10:31] 2025-07-27 13:10:12,393 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 15:10:31] 2025-07-27 13:10:12,393 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 15:10:31] 2025-07-27 13:10:12,393 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 15:10:31] 2025-07-27 13:10:12,393 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 15:10:31] 2025-07-27 13:10:12,395 | INFO     | fitting pss+swap vs Time
[2025-07-27 15:10:31] 2025-07-27 13:10:12,395 | INFO     | sum of square deviations: 115715658.0
[2025-07-27 15:10:31] 2025-07-27 13:10:12,395 | INFO     | sum of deviations: -11078955602.999998
[2025-07-27 15:10:31] 2025-07-27 13:10:12,395 | INFO     | mean x: 1753619455.5
[2025-07-27 15:10:31] 2025-07-27 13:10:12,395 | INFO     | mean y: 2870707.277777778
[2025-07-27 15:10:31] 2025-07-27 13:10:12,396 | INFO     | -- intersect: 167899527286.29953
[2025-07-27 15:10:31] 2025-07-27 13:10:12,396 | INFO     | intersect: 167899527286.29953
[2025-07-27 15:10:31] 2025-07-27 13:10:12,396 | INFO     | chi2: 0.12195224386143871
[2025-07-27 15:10:31] 2025-07-27 13:10:12,396 | INFO     | -- intersect: 167899527286.29953
[2025-07-27 15:10:31] 2025-07-27 13:10:12,396 | INFO     | current memory leak: -95.74 B/s (using 72 data points, chi2=0.12)
[2025-07-27 15:10:31] 2025-07-27 13:10:12,396 | INFO     | could have reported an average CPU frequency of 2617 MHz (6 samples)
[2025-07-27 15:10:31] 2025-07-27 13:10:12,396 | INFO     | ..............................
[2025-07-27 15:10:31] 2025-07-27 13:10:12,396 | INFO     | . Timing measurements:
[2025-07-27 15:10:31] 2025-07-27 13:10:12,397 | INFO     | . get job = 0 s
[2025-07-27 15:10:31] 2025-07-27 13:10:12,397 | INFO     | . initial setup = 1 s
[2025-07-27 15:10:31] 2025-07-27 13:10:12,397 | INFO     | . payload setup = 5 s
[2025-07-27 15:10:31] 2025-07-27 13:10:12,397 | INFO     | . stage-in = 0 s
[2025-07-27 15:10:31] 2025-07-27 13:10:12,397 | INFO     | . payload execution = 4817 s
[2025-07-27 15:10:31] 2025-07-27 13:10:12,397 | INFO     | . stage-out = 0 s
[2025-07-27 15:10:31] 2025-07-27 13:10:12,397 | INFO     | . log creation = 0 s
[2025-07-27 15:10:31] 2025-07-27 13:10:12,397 | INFO     | ..............................
[2025-07-27 15:10:31] 2025-07-27 13:10:12,466 | INFO     | 
[2025-07-27 15:10:31] 2025-07-27 13:10:12,466 | INFO     | job summary report
[2025-07-27 15:10:31] 2025-07-27 13:10:12,466 | INFO     | --------------------------------------------------
[2025-07-27 15:10:31] 2025-07-27 13:10:12,466 | INFO     | PanDA job id: 6745938890
[2025-07-27 15:10:31] 2025-07-27 13:10:12,466 | INFO     | task id: 45758332
[2025-07-27 15:10:31] 2025-07-27 13:10:12,466 | INFO     | errors: (none)
[2025-07-27 15:10:31] 2025-07-27 13:10:12,466 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 15:10:31] 2025-07-27 13:10:12,467 | INFO     | pilot state: finished 
[2025-07-27 15:10:31] 2025-07-27 13:10:12,467 | INFO     | transexitcode: 0
[2025-07-27 15:10:31] 2025-07-27 13:10:12,467 | INFO     | exeerrorcode: 0
[2025-07-27 15:10:31] 2025-07-27 13:10:12,467 | INFO     | exeerrordiag: 
[2025-07-27 15:10:31] 2025-07-27 13:10:12,467 | INFO     | exitcode: 0
[2025-07-27 15:10:31] 2025-07-27 13:10:12,467 | INFO     | exitmsg: OK
[2025-07-27 15:10:31] 2025-07-27 13:10:12,467 | INFO     | cpuconsumptiontime: 52979 s
[2025-07-27 15:10:31] 2025-07-27 13:10:12,467 | INFO     | nevents: 400
[2025-07-27 15:10:31] 2025-07-27 13:10:12,467 | INFO     | neventsw: 0
[2025-07-27 15:10:31] 2025-07-27 13:10:12,467 | INFO     | pid: 3140927
[2025-07-27 15:10:31] 2025-07-27 13:10:12,467 | INFO     | pgrp: 3140927
[2025-07-27 15:10:31] 2025-07-27 13:10:12,467 | INFO     | corecount: 12
[2025-07-27 15:10:31] 2025-07-27 13:10:12,468 | INFO     | event service: False
[2025-07-27 15:10:31] 2025-07-27 13:10:12,468 | INFO     | sizes: {0: 2397463, 3: 2397725, 11: 2397753, 4826: 2424042, 4828: 2433040, 4829: 2433096, 4836: 2433418}
[2025-07-27 15:10:31] 2025-07-27 13:10:12,468 | INFO     | --------------------------------------------------
[2025-07-27 15:10:31] 2025-07-27 13:10:12,468 | INFO     | 
[2025-07-27 15:10:31] 2025-07-27 13:10:12,468 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-27 15:10:31] 2025-07-27 13:10:12,484 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 15:10:31] 2025-07-27 13:10:12,485 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 15:10:31] 2025-07-27 13:10:12,485 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 15:10:31] 2025-07-27 13:10:12,485 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 15:10:31] 2025-07-27 13:10:12,485 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 15:10:31] 2025-07-27 13:10:12,485 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 15:10:31] 2025-07-27 13:10:12,485 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 15:10:31] 2025-07-27 13:10:12,485 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 15:10:31] 2025-07-27 13:10:12,485 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 15:10:31] 2025-07-27 13:10:12,486 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 15:10:31] 2025-07-27 13:10:12,486 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 15:10:31] 2025-07-27 13:10:12,486 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 15:10:31] 2025-07-27 13:10:12,486 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 15:10:31] 2025-07-27 13:10:12,486 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 15:10:31] 2025-07-27 13:10:12,486 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 15:10:31] 2025-07-27 13:10:12,486 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 15:10:31] 2025-07-27 13:10:12,486 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 15:10:31] 2025-07-27 13:10:12,486 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 15:10:31] 2025-07-27 13:10:12,486 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 15:10:31] 2025-07-27 13:10:12,486 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 15:10:31] 2025-07-27 13:10:12,487 | INFO     | job 6745938890 has completed (purged errors)
[2025-07-27 15:10:31] 2025-07-27 13:10:12,487 | INFO     | overall cleanup function is called
[2025-07-27 15:10:31] 2025-07-27 13:10:13,493 | INFO     | --- collectZombieJob: --- 10, [3140927]
[2025-07-27 15:10:31] 2025-07-27 13:10:13,493 | INFO     | zombie collector waiting for pid 3140927
[2025-07-27 15:10:31] 2025-07-27 13:10:13,494 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 15:10:31] 2025-07-27 13:10:13,494 | INFO     | collected zombie processes
[2025-07-27 15:10:31] 2025-07-27 13:10:13,494 | INFO     | will attempt to kill all subprocesses of pid=3140927
[2025-07-27 15:10:31] 2025-07-27 13:10:13,570 | INFO     | process IDs to be killed: [3140927] (in reverse order)
[2025-07-27 15:10:31] 2025-07-27 13:10:13,604 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 15:10:31] 2025-07-27 13:10:13,604 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 15:10:31] 2025-07-27 13:10:13,607 | INFO     | did not find any defunct processes belonging to 3140927
[2025-07-27 15:10:31] 2025-07-27 13:10:13,609 | INFO     | did not find any defunct processes belonging to 3140927
[2025-07-27 15:10:31] 2025-07-27 13:10:13,609 | INFO     | ready for new job
[2025-07-27 15:10:31] 2025-07-27 13:10:13,609 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 15:10:31] 2025-07-27 13:10:13,610 | INFO     | ***************************************
[2025-07-27 15:10:31] 2025-07-27 13:10:13,610 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 15:10:31] 2025-07-27 13:10:13,610 | INFO     | ***************************************
[2025-07-27 15:10:31] 2025-07-27 13:10:13,610 | INFO     | 
[2025-07-27 15:10:31] 2025-07-27 13:10:13,611 | INFO     | architecture information:
[2025-07-27 15:10:31] 2025-07-27 13:10:13,611 | INFO     | executing command: cat /etc/os-release
[2025-07-27 15:10:31] 2025-07-27 13:10:13,622 | INFO     | cat /etc/os-release:
[2025-07-27 15:10:31] NAME="CentOS Linux"
[2025-07-27 15:10:31] VERSION="7 (Core)"
[2025-07-27 15:10:31] ID="centos"
[2025-07-27 15:10:31] ID_LIKE="rhel fedora"
[2025-07-27 15:10:31] VERSION_ID="7"
[2025-07-27 15:10:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 15:10:31] ANSI_COLOR="0;31"
[2025-07-27 15:10:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 15:10:31] HOME_URL="https://www.centos.org/"
[2025-07-27 15:10:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 15:10:31] 
[2025-07-27 15:10:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 15:10:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 15:10:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 15:10:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 15:10:31] 
[2025-07-27 15:10:31] 2025-07-27 13:10:13,622 | INFO     | ***************************************
[2025-07-27 15:10:31] 2025-07-27 13:10:14,125 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-27 15:10:31] 2025-07-27 13:10:14,136 | INFO     | sufficient remaining disk space (1817263996928 B)
[2025-07-27 15:10:31] 2025-07-27 13:10:14,136 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 15:10:31] 2025-07-27 13:10:14,136 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 15:10:31] 2025-07-27 13:10:14,136 | INFO     | update_server=False
[2025-07-27 15:10:31] 2025-07-27 13:10:14,136 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 15:10:31] 2025-07-27 13:10:14,137 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:10:31] 2025-07-27 13:10:14,137 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-27 15:10:31] 2025-07-27 13:10:14,137 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 15:10:31] 2025-07-27 13:10:14,137 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 15:10:31] 2025-07-27 13:10:14,137 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 15:10:31] 2025-07-27 13:10:14,178 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 15:10:31] 2025-07-27 13:10:14,178 | INFO     | aborting loop
[2025-07-27 15:10:31] 2025-07-27 13:10:14,360 | INFO     | all payload control threads have been joined
[2025-07-27 15:10:31] 2025-07-27 13:10:14,828 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 15:10:31] 2025-07-27 13:10:14,978 | INFO     | all job control threads have been joined
[2025-07-27 15:10:31] 2025-07-27 13:10:15,010 | INFO     | all data control threads have been joined
[2025-07-27 15:10:31] 2025-07-27 13:10:15,142 | INFO     | [job] retrieve thread has finished
[2025-07-27 15:10:31] 2025-07-27 13:10:15,142 | INFO     | [job] queue monitor thread has finished
[2025-07-27 15:10:31] 2025-07-27 13:10:15,177 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 15:10:31] 2025-07-27 13:10:15,183 | INFO     | [job] job monitor thread has finished
[2025-07-27 15:10:31] 2025-07-27 13:10:15,194 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 15:10:31] 2025-07-27 13:10:15,247 | INFO     | [data] copytool_in thread has finished
[2025-07-27 15:10:31] 2025-07-27 13:10:15,364 | INFO     | [payload] control thread has finished
[2025-07-27 15:10:31] 2025-07-27 13:10:15,429 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 15:10:31] 2025-07-27 13:10:15,984 | INFO     | [job] control thread has finished
[2025-07-27 15:10:31] 2025-07-27 13:10:16,014 | INFO     | [data] control thread has finished
[2025-07-27 15:10:31] 2025-07-27 13:10:16,041 | INFO     | [payload] validate_post thread has finished
[2025-07-27 15:10:31] 2025-07-27 13:10:16,181 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 15:10:31] 2025-07-27 13:10:16,503 | INFO     | [job] validate thread has finished
[2025-07-27 15:10:31] 2025-07-27 13:10:16,652 | INFO     | [payload] failed_post thread has finished
[2025-07-27 15:10:31] 2025-07-27 13:10:16,834 | INFO     | [data] copytool_out thread has finished
[2025-07-27 15:10:31] 2025-07-27 13:10:20,187 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 15:10:31] 2025-07-27 13:10:24,629 | INFO     | job.realtimelogging is not enabled
[2025-07-27 15:10:31] 2025-07-27 13:10:25,634 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 15:10:31] 2025-07-27 13:10:26,785 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140115498391360)>', '<ExcThread(monitor, started 140114952959744)>']
[2025-07-27 15:10:31] 2025-07-27 13:10:27,204 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 15:10:31] 2025-07-27 13:10:27,204 | INFO     | [monitor] control thread has ended
[2025-07-27 15:10:31] 2025-07-27 13:10:31,794 | INFO     | all workflow threads have been joined
[2025-07-27 15:10:31] 2025-07-27 13:10:31,795 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 15:10:31] 2025-07-27 13:10:31,795 | INFO     | traces error code: 0
[2025-07-27 15:10:31] 2025-07-27 13:10:31,795 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 15:10:31] 2025-07-27 13:10:31,879 [wrapper] ==== pilot stdout END ====
[2025-07-27 15:10:31] 2025-07-27 13:10:31,882 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 15:10:31] 2025-07-27 13:10:31,885 [wrapper] pilotpid: 3133806
[2025-07-27 15:10:31] 2025-07-27 13:10:31,887 [wrapper] Pilot exit status: 0
[2025-07-27 15:10:31] 2025-07-27 13:10:31,896 [wrapper] pandaids: 6745938890
[2025-07-27 15:10:31] 2025-07-27 13:10:31,915 [wrapper] cleanup supervisor_pilot 3157678 3133807
[2025-07-27 15:10:31] 2025-07-27 13:10:31,917 [wrapper] Test setup, not cleaning
[2025-07-27 15:10:31] 2025-07-27 13:10:31,919 [wrapper] apfmon messages muted
[2025-07-27 15:10:31] 2025-07-27 13:10:31,920 [wrapper] ==== wrapper stdout END ====
[2025-07-27 15:10:31] 2025-07-27 13:10:31,922 [wrapper] ==== wrapper stderr END ====
[2025-07-27 15:10:31]  *** Error codes and diagnostics ***
[2025-07-27 15:10:31]     "exeErrorCode": 0,
[2025-07-27 15:10:31]     "exeErrorDiag": "",
[2025-07-27 15:10:31]     "pilotErrorCode": 0,
[2025-07-27 15:10:31]     "pilotErrorDiag": "",
[2025-07-27 15:10:31]  *** Listing of results directory ***
[2025-07-27 15:10:31] total 409336
[2025-07-27 15:10:31] -rw-r--r-- 1 boinc boinc    530466 Jul 27 02:36 pilot3.tar.gz
[2025-07-27 15:10:31] -rw-r--r-- 1 boinc boinc      5112 Jul 27 03:03 queuedata.json
[2025-07-27 15:10:31] -rwx------ 1 boinc boinc     36292 Jul 27 03:03 runpilot2-wrapper.sh
[2025-07-27 15:10:31] -rw-r--r-- 1 boinc boinc       100 Jul 27 13:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 15:10:31] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 13:49 run_atlas
[2025-07-27 15:10:31] -rw-r--r-- 1 boinc boinc       105 Jul 27 13:49 job.xml
[2025-07-27 15:10:31] -rw-r--r-- 2 boinc boinc     15095 Jul 27 13:49 start_atlas.sh
[2025-07-27 15:10:31] drwxrwx--x 2 boinc boinc        68 Jul 27 13:49 shared
[2025-07-27 15:10:31] -rw-r--r-- 2 boinc boinc    542881 Jul 27 13:49 input.tar.gz
[2025-07-27 15:10:31] -rw-r--r-- 1 boinc boinc      6294 Jul 27 13:49 init_data.xml
[2025-07-27 15:10:31] -rw-r--r-- 2 boinc boinc 243443566 Jul 27 13:49 EVNT.45758330._000003.pool.root.1
[2025-07-27 15:10:31] -rw-r--r-- 1 boinc boinc         0 Jul 27 13:49 boinc_lockfile
[2025-07-27 15:10:31] -rw-r--r-- 1 boinc boinc      2556 Jul 27 13:49 pandaJob.out
[2025-07-27 15:10:31] -rw------- 1 boinc boinc    980109 Jul 27 13:49 agis_schedconf.cvmfs.json
[2025-07-27 15:10:31] -rw------- 1 boinc boinc   1593052 Jul 27 13:49 agis_ddmendpoints.agis.ALL.json
[2025-07-27 15:10:31] drwx------ 4 boinc boinc      4096 Jul 27 13:49 pilot3
[2025-07-27 15:10:31] -rw------- 1 boinc boinc        95 Jul 27 15:09 pilot_heartbeat.json
[2025-07-27 15:10:31] -rw------- 1 boinc boinc 170173347 Jul 27 15:09 HITS.45758332._000048.pool.root.1
[2025-07-27 15:10:31] -rw------- 1 boinc boinc      1017 Jul 27 15:09 memory_monitor_summary.json
[2025-07-27 15:10:31] -rw-r--r-- 1 boinc boinc       529 Jul 27 15:10 boinc_task_state.xml
[2025-07-27 15:10:31] -rw------- 1 boinc boinc    375670 Jul 27 15:10 log.45758332._000048.job.log.tgz.1
[2025-07-27 15:10:31] -rw------- 1 boinc boinc      7777 Jul 27 15:10 heartbeat.json
[2025-07-27 15:10:31] -rw-r--r-- 1 boinc boinc      8192 Jul 27 15:10 boinc_mmap_file
[2025-07-27 15:10:31] -rw-r--r-- 1 boinc boinc        27 Jul 27 15:10 wrapper_checkpoint.txt
[2025-07-27 15:10:31] -rw------- 1 boinc boinc      4554 Jul 27 15:10 pilotlog.txt
[2025-07-27 15:10:31] -rw------- 1 boinc boinc    462629 Jul 27 15:10 log.45758332._000048.job.log.1
[2025-07-27 15:10:31] -rw------- 1 boinc boinc       357 Jul 27 15:10 output.list
[2025-07-27 15:10:31] -rw-r--r-- 1 boinc boinc       620 Jul 27 15:10 runtime_log
[2025-07-27 15:10:31] -rw------- 1 boinc boinc    860160 Jul 27 15:10 result.tar.gz
[2025-07-27 15:10:31] -rw-r--r-- 1 boinc boinc      8684 Jul 27 15:10 runtime_log.err
[2025-07-27 15:10:31] -rw------- 1 boinc boinc       655 Jul 27 15:10 dpLKDmwy4z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVkTLDmEaF6Qn.diag
[2025-07-27 15:10:31] -rw-r--r-- 1 boinc boinc     21612 Jul 27 15:10 stderr.txt
[2025-07-27 15:10:31] HITS file was successfully produced:
[2025-07-27 15:10:31] -rw------- 1 boinc boinc 170173347 Jul 27 15:09 shared/HITS.pool.root.1
[2025-07-27 15:10:31]  *** Contents of shared directory: ***
[2025-07-27 15:10:31] total 405316
[2025-07-27 15:10:31] -rw-r--r-- 2 boinc boinc     15095 Jul 27 13:49 start_atlas.sh
[2025-07-27 15:10:31] -rw-r--r-- 2 boinc boinc    542881 Jul 27 13:49 input.tar.gz
[2025-07-27 15:10:31] -rw-r--r-- 2 boinc boinc 243443566 Jul 27 13:49 ATLAS.root_0
[2025-07-27 15:10:31] -rw------- 1 boinc boinc 170173347 Jul 27 15:09 HITS.pool.root.1
[2025-07-27 15:10:31] -rw------- 1 boinc boinc    860160 Jul 27 15:10 result.tar.gz
15:10:33 (3130119): run_atlas exited; CPU time 53013.033995
15:10:33 (3130119): called boinc_finish(0)

</stderr_txt>
]]>

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