Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:15:23 (843967): wrapper (7.7.26015): starting
02:15:23 (843967): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 02:15:23] Arguments: --nthreads 8
[2025-07-27 02:15:23] Threads: 8
[2025-07-27 02:15:23] Checking for CVMFS
[2025-07-27 02:15:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 02:15:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 02:15:24] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 02:15:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 02:15:24] 2.13.0.0 112940 26859 195536 148802 0 65 21751517 40960000 24219 16776704 0 219958848 99.663 221371101 30070 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 02:15:24] CVMFS is ok
[2025-07-27 02:15:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 02:15:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 02:15:24] Further information can be found at the LHC@home message board.
[2025-07-27 02:15:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 02:15:24] Checking for apptainer binary...
[2025-07-27 02:15:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 02:15:24] Running /usr/bin/apptainer --version
[2025-07-27 02:15:24] apptainer version 1.4.1-1.el9
[2025-07-27 02:15:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 02:15:25] c8-7-3.aglt2.org
[2025-07-27 02:15:25] apptainer works
[2025-07-27 02:15:25] Set ATHENA_PROC_NUMBER=8
[2025-07-27 02:15:25] Set ATHENA_CORE_NUMBER=8
[2025-07-27 02:15:25] Starting ATLAS job with PandaID=6745938865
[2025-07-27 02:15:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 03:38:44]  *** The last 200 lines of the pilot log: ***
[2025-07-27 03:38:44]  workdir=None
[2025-07-27 03:38:44] ]
[2025-07-27 03:38:44] 2025-07-27 07:37:49,634 | INFO     | transferring file log.45758332._000023.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745938865/log.45758332._000023.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 03:38:44] 2025-07-27 07:37:49,634 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745938865/log.45758332._000023.job.log.tgz.1 /tmp/boinchome/slots/0/log.45758332._000023.job
[2025-07-27 03:38:44] 2025-07-27 07:37:49,686 | INFO     | adding to output.list: log.45758332._000023.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/33/d6/log.45758332._000023.job.log.tg
[2025-07-27 03:38:44] 2025-07-27 07:37:49,688 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 03:38:44] 2025-07-27 07:37:49,690 | INFO     | summary of transferred files:
[2025-07-27 03:38:44] 2025-07-27 07:37:49,690 | INFO     |  -- lfn=log.45758332._000023.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 03:38:44] 2025-07-27 07:37:49,690 | INFO     | stage-out finished correctly
[2025-07-27 03:38:44] 2025-07-27 07:37:52,107 | WARNING  | process 866745 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 03:38:44] 2025-07-27 07:37:52,109 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745938865/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 03:38:44] 2025-07-27 07:37:52,585 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 03:38:44] 2025-07-27 07:37:52,908 | INFO     | number of running child processes to parent process 866745: 1
[2025-07-27 03:38:44] 2025-07-27 07:37:52,908 | INFO     | maximum number of monitored processes: 6
[2025-07-27 03:38:44] 2025-07-27 07:37:53,627 | INFO     | job 6745938865 has state=finished
[2025-07-27 03:38:44] 2025-07-27 07:37:53,627 | INFO     | preparing for final server update for job 6745938865 in state='finished'
[2025-07-27 03:38:44] 2025-07-27 07:37:53,628 | INFO     | this job has now completed (state=finished)
[2025-07-27 03:38:44] 2025-07-27 07:37:53,628 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 03:38:44] 2025-07-27 07:37:53,628 | INFO     | log transfer has been attempted: DONE
[2025-07-27 03:38:44] 2025-07-27 07:37:53,628 | INFO     | job 6745938865 has finished - writing final server update
[2025-07-27 03:38:44] 2025-07-27 07:37:53,628 | INFO     | total number of processed events: 400 (read)
[2025-07-27 03:38:44] 2025-07-27 07:37:53,686 | INFO     | executing command: lscpu
[2025-07-27 03:38:44] 2025-07-27 07:37:53,836 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 03:38:44] 2025-07-27 07:37:55,414 | INFO     | monitor loop #338: job 0:6745938865 is in state 'finished'
[2025-07-27 03:38:44] 2025-07-27 07:37:55,415 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:38:44] 2025-07-27 07:37:57,920 | INFO     | monitor loop #339: job 0:6745938865 is in state 'finished'
[2025-07-27 03:38:44] 2025-07-27 07:37:57,920 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:38:44] 2025-07-27 07:38:00,438 | INFO     | monitor loop #340: job 0:6745938865 is in state 'finished'
[2025-07-27 03:38:44] 2025-07-27 07:38:00,438 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:38:44] 2025-07-27 07:38:02,943 | INFO     | monitor loop #341: job 0:6745938865 is in state 'finished'
[2025-07-27 03:38:44] 2025-07-27 07:38:02,943 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:38:44] 2025-07-27 07:38:05,453 | INFO     | monitor loop #342: job 0:6745938865 is in state 'finished'
[2025-07-27 03:38:44] 2025-07-27 07:38:05,453 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:38:44] 2025-07-27 07:38:07,958 | INFO     | monitor loop #343: job 0:6745938865 is in state 'finished'
[2025-07-27 03:38:44] 2025-07-27 07:38:07,958 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:38:44] 2025-07-27 07:38:09,751 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 03:38:44] 2025-07-27 07:38:09,764 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3657.9373828125026
[2025-07-27 03:38:44] 2025-07-27 07:38:09,870 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745938865/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 03:38:44] 2025-07-27 07:38:09,870 | INFO     | extracted standard info from prmon json
[2025-07-27 03:38:44] 2025-07-27 07:38:09,870 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 03:38:44] 2025-07-27 07:38:09,870 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 03:38:44] 2025-07-27 07:38:09,871 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 03:38:44] 2025-07-27 07:38:09,871 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 03:38:44] 2025-07-27 07:38:09,872 | INFO     | fitting pss+swap vs Time
[2025-07-27 03:38:44] 2025-07-27 07:38:09,872 | INFO     | sum of square deviations: 115715658.0
[2025-07-27 03:38:44] 2025-07-27 07:38:09,872 | INFO     | sum of deviations: -2451894084.999999
[2025-07-27 03:38:44] 2025-07-27 07:38:09,872 | INFO     | mean x: 1753599548.5
[2025-07-27 03:38:44] 2025-07-27 07:38:09,872 | INFO     | mean y: 2206791.1666666665
[2025-07-27 03:38:44] 2025-07-27 07:38:09,872 | INFO     | -- intersect: 37159151968.16094
[2025-07-27 03:38:44] 2025-07-27 07:38:09,872 | INFO     | intersect: 37159151968.16094
[2025-07-27 03:38:44] 2025-07-27 07:38:09,873 | INFO     | chi2: 0.03868307865102729
[2025-07-27 03:38:44] 2025-07-27 07:38:09,873 | INFO     | -- intersect: 37159151968.16094
[2025-07-27 03:38:44] 2025-07-27 07:38:09,873 | INFO     | current memory leak: -21.19 B/s (using 72 data points, chi2=0.04)
[2025-07-27 03:38:44] 2025-07-27 07:38:09,873 | INFO     | could have reported an average CPU frequency of 3667 MHz (6 samples)
[2025-07-27 03:38:44] 2025-07-27 07:38:09,873 | INFO     | ..............................
[2025-07-27 03:38:44] 2025-07-27 07:38:09,873 | INFO     | . Timing measurements:
[2025-07-27 03:38:44] 2025-07-27 07:38:09,873 | INFO     | . get job = 0 s
[2025-07-27 03:38:44] 2025-07-27 07:38:09,873 | INFO     | . initial setup = 7 s
[2025-07-27 03:38:44] 2025-07-27 07:38:09,873 | INFO     | . payload setup = 27 s
[2025-07-27 03:38:44] 2025-07-27 07:38:09,873 | INFO     | . stage-in = 0 s
[2025-07-27 03:38:44] 2025-07-27 07:38:09,873 | INFO     | . payload execution = 4803 s
[2025-07-27 03:38:44] 2025-07-27 07:38:09,873 | INFO     | . stage-out = 0 s
[2025-07-27 03:38:44] 2025-07-27 07:38:09,873 | INFO     | . log creation = 0 s
[2025-07-27 03:38:44] 2025-07-27 07:38:09,873 | INFO     | ..............................
[2025-07-27 03:38:44] 2025-07-27 07:38:10,087 | INFO     | 
[2025-07-27 03:38:44] 2025-07-27 07:38:10,087 | INFO     | job summary report
[2025-07-27 03:38:44] 2025-07-27 07:38:10,087 | INFO     | --------------------------------------------------
[2025-07-27 03:38:44] 2025-07-27 07:38:10,087 | INFO     | PanDA job id: 6745938865
[2025-07-27 03:38:44] 2025-07-27 07:38:10,087 | INFO     | task id: 45758332
[2025-07-27 03:38:44] 2025-07-27 07:38:10,087 | INFO     | errors: (none)
[2025-07-27 03:38:44] 2025-07-27 07:38:10,087 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 03:38:44] 2025-07-27 07:38:10,087 | INFO     | pilot state: finished 
[2025-07-27 03:38:44] 2025-07-27 07:38:10,087 | INFO     | transexitcode: 0
[2025-07-27 03:38:44] 2025-07-27 07:38:10,087 | INFO     | exeerrorcode: 0
[2025-07-27 03:38:44] 2025-07-27 07:38:10,087 | INFO     | exeerrordiag: 
[2025-07-27 03:38:44] 2025-07-27 07:38:10,087 | INFO     | exitcode: 0
[2025-07-27 03:38:44] 2025-07-27 07:38:10,087 | INFO     | exitmsg: OK
[2025-07-27 03:38:44] 2025-07-27 07:38:10,087 | INFO     | cpuconsumptiontime: 30909 s
[2025-07-27 03:38:44] 2025-07-27 07:38:10,088 | INFO     | nevents: 400
[2025-07-27 03:38:44] 2025-07-27 07:38:10,088 | INFO     | neventsw: 0
[2025-07-27 03:38:44] 2025-07-27 07:38:10,088 | INFO     | pid: 866745
[2025-07-27 03:38:44] 2025-07-27 07:38:10,088 | INFO     | pgrp: 866745
[2025-07-27 03:38:44] 2025-07-27 07:38:10,088 | INFO     | corecount: 8
[2025-07-27 03:38:44] 2025-07-27 07:38:10,088 | INFO     | event service: False
[2025-07-27 03:38:44] 2025-07-27 07:38:10,088 | INFO     | sizes: {0: 2397234, 1: 2397489, 12: 2397489, 22: 2397517, 27: 2397807, 33: 2397835, 4834: 2424329, 4835: 2424328, 4836: 2433382, 4839: 2433438, 4856: 2433632}
[2025-07-27 03:38:44] 2025-07-27 07:38:10,088 | INFO     | --------------------------------------------------
[2025-07-27 03:38:44] 2025-07-27 07:38:10,088 | INFO     | 
[2025-07-27 03:38:44] 2025-07-27 07:38:10,088 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 03:38:44] 2025-07-27 07:38:10,139 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 03:38:44] 2025-07-27 07:38:10,139 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 03:38:44] 2025-07-27 07:38:10,139 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 03:38:44] 2025-07-27 07:38:10,139 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 03:38:44] 2025-07-27 07:38:10,139 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 03:38:44] 2025-07-27 07:38:10,139 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 03:38:44] 2025-07-27 07:38:10,139 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 03:38:44] 2025-07-27 07:38:10,139 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 03:38:44] 2025-07-27 07:38:10,140 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 03:38:44] 2025-07-27 07:38:10,140 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 03:38:44] 2025-07-27 07:38:10,140 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 03:38:44] 2025-07-27 07:38:10,140 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 03:38:44] 2025-07-27 07:38:10,140 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 03:38:44] 2025-07-27 07:38:10,140 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 03:38:44] 2025-07-27 07:38:10,140 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 03:38:44] 2025-07-27 07:38:10,140 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 03:38:44] 2025-07-27 07:38:10,140 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 03:38:44] 2025-07-27 07:38:10,140 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 03:38:44] 2025-07-27 07:38:10,140 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 03:38:44] 2025-07-27 07:38:10,140 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 03:38:44] 2025-07-27 07:38:10,140 | INFO     | job 6745938865 has completed (purged errors)
[2025-07-27 03:38:44] 2025-07-27 07:38:10,140 | INFO     | overall cleanup function is called
[2025-07-27 03:38:44] 2025-07-27 07:38:10,980 | INFO     | PID=850561 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 03:38:44] 2025-07-27 07:38:10,980 | INFO     | .. there are 24 such processes running
[2025-07-27 03:38:44] 2025-07-27 07:38:11,156 | INFO     | --- collectZombieJob: --- 10, [866745]
[2025-07-27 03:38:44] 2025-07-27 07:38:11,157 | INFO     | zombie collector waiting for pid 866745
[2025-07-27 03:38:44] 2025-07-27 07:38:11,157 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 03:38:44] 2025-07-27 07:38:11,157 | INFO     | collected zombie processes
[2025-07-27 03:38:44] 2025-07-27 07:38:11,157 | INFO     | will attempt to kill all subprocesses of pid=866745
[2025-07-27 03:38:44] 2025-07-27 07:38:12,106 | INFO     | process IDs to be killed: [866745] (in reverse order)
[2025-07-27 03:38:44] 2025-07-27 07:38:12,318 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 03:38:44] 2025-07-27 07:38:12,318 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 03:38:44] 2025-07-27 07:38:12,348 | INFO     | did not find any defunct processes belonging to 866745
[2025-07-27 03:38:44] 2025-07-27 07:38:12,397 | INFO     | did not find any defunct processes belonging to 866745
[2025-07-27 03:38:44] 2025-07-27 07:38:12,402 | INFO     | ready for new job
[2025-07-27 03:38:44] 2025-07-27 07:38:12,402 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 03:38:44] 2025-07-27 07:38:12,403 | INFO     | ***************************************
[2025-07-27 03:38:44] 2025-07-27 07:38:12,404 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 03:38:44] 2025-07-27 07:38:12,404 | INFO     | ***************************************
[2025-07-27 03:38:44] 2025-07-27 07:38:12,404 | INFO     | 
[2025-07-27 03:38:44] 2025-07-27 07:38:12,426 | INFO     | architecture information:
[2025-07-27 03:38:44] 2025-07-27 07:38:12,430 | INFO     | executing command: cat /etc/os-release
[2025-07-27 03:38:44] 2025-07-27 07:38:12,493 | INFO     | cat /etc/os-release:
[2025-07-27 03:38:44] NAME="CentOS Linux"
[2025-07-27 03:38:44] VERSION="7 (Core)"
[2025-07-27 03:38:44] ID="centos"
[2025-07-27 03:38:44] ID_LIKE="rhel fedora"
[2025-07-27 03:38:44] VERSION_ID="7"
[2025-07-27 03:38:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 03:38:44] ANSI_COLOR="0;31"
[2025-07-27 03:38:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 03:38:44] HOME_URL="https://www.centos.org/"
[2025-07-27 03:38:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 03:38:44] 
[2025-07-27 03:38:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 03:38:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 03:38:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 03:38:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 03:38:44] 
[2025-07-27 03:38:44] 2025-07-27 07:38:12,493 | INFO     | ***************************************
[2025-07-27 03:38:44] 2025-07-27 07:38:12,997 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 03:38:44] 2025-07-27 07:38:13,034 | INFO     | sufficient remaining disk space (172045107200 B)
[2025-07-27 03:38:44] 2025-07-27 07:38:13,036 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 03:38:44] 2025-07-27 07:38:13,036 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 03:38:44] 2025-07-27 07:38:13,036 | INFO     | update_server=False
[2025-07-27 03:38:44] 2025-07-27 07:38:13,036 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 03:38:44] 2025-07-27 07:38:13,036 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 03:38:44] 2025-07-27 07:38:13,036 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 03:38:44] 2025-07-27 07:38:13,371 | INFO     | all data control threads have been joined
[2025-07-27 03:38:44] 2025-07-27 07:38:13,470 | INFO     | all payload control threads have been joined
[2025-07-27 03:38:44] 2025-07-27 07:38:13,518 | INFO     | all job control threads have been joined
[2025-07-27 03:38:44] 2025-07-27 07:38:13,999 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 03:38:44] 2025-07-27 07:38:13,999 | INFO     | aborting loop
[2025-07-27 03:38:44] 2025-07-27 07:38:14,042 | INFO     | [job] retrieve thread has finished
[2025-07-27 03:38:44] 2025-07-27 07:38:14,325 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 03:38:44] 2025-07-27 07:38:14,377 | INFO     | [data] control thread has finished
[2025-07-27 03:38:44] 2025-07-27 07:38:14,406 | INFO     | [payload] failed_post thread has finished
[2025-07-27 03:38:44] 2025-07-27 07:38:14,409 | INFO     | [job] validate thread has finished
[2025-07-27 03:38:44] 2025-07-27 07:38:14,476 | INFO     | [payload] control thread has finished
[2025-07-27 03:38:44] 2025-07-27 07:38:14,524 | INFO     | [job] control thread has finished
[2025-07-27 03:38:44] 2025-07-27 07:38:14,836 | INFO     | [data] copytool_in thread has finished
[2025-07-27 03:38:44] 2025-07-27 07:38:14,920 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 03:38:44] 2025-07-27 07:38:15,005 | INFO     | [job] job monitor thread has finished
[2025-07-27 03:38:44] 2025-07-27 07:38:15,043 | INFO     | [data] copytool_out thread has finished
[2025-07-27 03:38:44] 2025-07-27 07:38:15,064 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 03:38:44] 2025-07-27 07:38:15,102 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 03:38:44] 2025-07-27 07:38:15,204 | INFO     | [payload] validate_post thread has finished
[2025-07-27 03:38:44] 2025-07-27 07:38:15,440 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 03:38:44] 2025-07-27 07:38:16,109 | INFO     | [job] queue monitor thread has finished
[2025-07-27 03:38:44] 2025-07-27 07:38:17,045 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 03:38:44] 2025-07-27 07:38:17,642 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139728798168896)>', '<ExcThread(monitor, started 139728162645760)>']
[2025-07-27 03:38:44] 2025-07-27 07:38:22,667 | INFO     | all workflow threads have been joined
[2025-07-27 03:38:44] 2025-07-27 07:38:22,668 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 03:38:44] 2025-07-27 07:38:22,668 | INFO     | traces error code: 0
[2025-07-27 03:38:44] 2025-07-27 07:38:22,669 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 03:38:44] 2025-07-27 07:38:43,836 | INFO     | PID=850561 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 03:38:44] 2025-07-27 07:38:43,836 | INFO     | .. there are 24 such processes running
[2025-07-27 03:38:44] 2025-07-27 07:38:43,837 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 03:38:44] 2025-07-27 07:38:43,837 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 03:38:44] 2025-07-27 07:38:43,837 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 03:38:44] 2025-07-27 07:38:43,837 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 03:38:44] 2025-07-27 07:38:43,837 | INFO     | [monitor] control thread has ended
[2025-07-27 03:38:44] 2025-07-27 07:38:43,998 [wrapper] ==== pilot stdout END ====
[2025-07-27 03:38:44] 2025-07-27 07:38:44,014 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 03:38:44] 2025-07-27 07:38:44,020 [wrapper] pilotpid: 850561
[2025-07-27 03:38:44] 2025-07-27 07:38:44,031 [wrapper] Pilot exit status: 0
[2025-07-27 03:38:44] 2025-07-27 07:38:44,062 [wrapper] pandaids: 6745938865
[2025-07-27 03:38:44] 2025-07-27 07:38:44,206 [wrapper] cleanup supervisor_pilot 1594069 850562
[2025-07-27 03:38:44] 2025-07-27 07:38:44,219 [wrapper] Test setup, not cleaning
[2025-07-27 03:38:44] 2025-07-27 07:38:44,230 [wrapper] apfmon messages muted
[2025-07-27 03:38:44] 2025-07-27 07:38:44,255 [wrapper] ==== wrapper stdout END ====
[2025-07-27 03:38:44] 2025-07-27 07:38:44,281 [wrapper] ==== wrapper stderr END ====
[2025-07-27 03:38:44]  *** Error codes and diagnostics ***
[2025-07-27 03:38:44]     "exeErrorCode": 0,
[2025-07-27 03:38:44]     "exeErrorDiag": "",
[2025-07-27 03:38:44]     "pilotErrorCode": 0,
[2025-07-27 03:38:44]     "pilotErrorDiag": "",
[2025-07-27 03:38:44]  *** Listing of results directory ***
[2025-07-27 03:38:44] total 420876
[2025-07-27 03:38:44] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 20:36 pilot3.tar.gz
[2025-07-27 03:38:44] -rwx------. 1 boincer umatlas     36292 Jul 26 21:03 runpilot2-wrapper.sh
[2025-07-27 03:38:44] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 21:03 queuedata.json
[2025-07-27 03:38:44] -rw-r--r--. 1 boincer umatlas       100 Jul 27 02:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 03:38:44] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 02:15 run_atlas
[2025-07-27 03:38:44] -rw-r--r--. 1 boincer umatlas       105 Jul 27 02:15 job.xml
[2025-07-27 03:38:44] -rw-r--r--. 2 boincer umatlas 246495782 Jul 27 02:15 EVNT.45758330._000002.pool.root.1
[2025-07-27 03:38:44] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 02:15 shared
[2025-07-27 03:38:44] -rw-r--r--. 2 boincer umatlas    542877 Jul 27 02:15 input.tar.gz
[2025-07-27 03:38:44] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 02:15 start_atlas.sh
[2025-07-27 03:38:44] -rw-r--r--. 1 boincer umatlas         0 Jul 27 02:15 boinc_lockfile
[2025-07-27 03:38:44] -rw-r--r--. 1 boincer umatlas      2555 Jul 27 02:15 pandaJob.out
[2025-07-27 03:38:44] -rw-------. 1 boincer umatlas    980109 Jul 27 02:16 agis_schedconf.cvmfs.json
[2025-07-27 03:38:44] -rw-------. 1 boincer umatlas   1593052 Jul 27 02:16 agis_ddmendpoints.agis.ALL.json
[2025-07-27 03:38:44] drwx------. 4 boincer umatlas      4096 Jul 27 02:16 pilot3
[2025-07-27 03:38:44] -rw-r--r--. 1 boincer umatlas      7161 Jul 27 03:28 init_data.xml
[2025-07-27 03:38:44] -rw-------. 1 boincer umatlas 179044750 Jul 27 03:37 HITS.45758332._000023.pool.root.1
[2025-07-27 03:38:44] -rw-r--r--. 1 boincer umatlas       530 Jul 27 03:37 boinc_task_state.xml
[2025-07-27 03:38:44] -rw-------. 1 boincer umatlas      1033 Jul 27 03:37 memory_monitor_summary.json
[2025-07-27 03:38:44] -rw-------. 1 boincer umatlas    321036 Jul 27 03:37 log.45758332._000023.job.log.tgz.1
[2025-07-27 03:38:44] -rw-------. 1 boincer umatlas      7763 Jul 27 03:38 heartbeat.json
[2025-07-27 03:38:44] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 03:38 boinc_mmap_file
[2025-07-27 03:38:44] -rw-r--r--. 1 boincer umatlas        27 Jul 27 03:38 wrapper_checkpoint.txt
[2025-07-27 03:38:44] -rw-------. 1 boincer umatlas        95 Jul 27 03:38 pilot_heartbeat.json
[2025-07-27 03:38:44] -rw-------. 1 boincer umatlas       822 Jul 27 03:38 pilotlog.txt
[2025-07-27 03:38:44] -rw-------. 1 boincer umatlas    459549 Jul 27 03:38 log.45758332._000023.job.log.1
[2025-07-27 03:38:44] -rw-------. 1 boincer umatlas       357 Jul 27 03:38 output.list
[2025-07-27 03:38:44] -rw-r--r--. 1 boincer umatlas       620 Jul 27 03:38 runtime_log
[2025-07-27 03:38:44] -rw-------. 1 boincer umatlas    798720 Jul 27 03:38 result.tar.gz
[2025-07-27 03:38:44] -rw-r--r--. 1 boincer umatlas      8650 Jul 27 03:38 runtime_log.err
[2025-07-27 03:38:44] -rw-------. 1 boincer umatlas       651 Jul 27 03:38 BWjMDmsy4z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqjTLDmEU2KTn.diag
[2025-07-27 03:38:44] -rw-r--r--. 1 boincer umatlas     22499 Jul 27 03:38 stderr.txt
[2025-07-27 03:38:44] HITS file was successfully produced:
[2025-07-27 03:38:44] -rw-------. 1 boincer umatlas 179044750 Jul 27 03:37 shared/HITS.pool.root.1
[2025-07-27 03:38:44]  *** Contents of shared directory: ***
[2025-07-27 03:38:44] total 416904
[2025-07-27 03:38:44] -rw-r--r--. 2 boincer umatlas 246495782 Jul 27 02:15 ATLAS.root_0
[2025-07-27 03:38:44] -rw-r--r--. 2 boincer umatlas    542877 Jul 27 02:15 input.tar.gz
[2025-07-27 03:38:44] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 02:15 start_atlas.sh
[2025-07-27 03:38:44] -rw-------. 1 boincer umatlas 179044750 Jul 27 03:37 HITS.pool.root.1
[2025-07-27 03:38:44] -rw-------. 1 boincer umatlas    798720 Jul 27 03:38 result.tar.gz
03:38:46 (843967): run_atlas exited; CPU time 31020.663176
03:38:46 (843967): called boinc_finish(0)

</stderr_txt>
]]>

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