Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:42:13 (2219926): wrapper (7.7.26015): starting
03:42:13 (2219926): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 03:42:13] Arguments: --nthreads 12
[2025-07-27 03:42:13] Threads: 12
[2025-07-27 03:42:13] Checking for CVMFS
[2025-07-27 03:42:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 03:42:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 03:42:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 03:42:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 03:42:13] 2.13.0.0 2408171 18080 310172 148804 3 65 20384670 32935936 8470 16776704 0 37115902 99.690 57158436 29729 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 03:42:13] CVMFS is ok
[2025-07-27 03:42:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 03:42:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 03:42:13] Further information can be found at the LHC@home message board.
[2025-07-27 03:42:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 03:42:13] Checking for apptainer binary...
[2025-07-27 03:42:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 03:42:13] Running /usr/bin/apptainer --version
[2025-07-27 03:42:13] apptainer version 1.4.1-1.el9
[2025-07-27 03:42:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 03:42:13] c6-5-7-3.aglt2.org
[2025-07-27 03:42:13] apptainer works
[2025-07-27 03:42:13] Set ATHENA_PROC_NUMBER=12
[2025-07-27 03:42:13] Set ATHENA_CORE_NUMBER=12
[2025-07-27 03:42:13] Starting ATLAS job with PandaID=6745919735
[2025-07-27 03:42:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 05:15:38]  *** The last 200 lines of the pilot log: ***
[2025-07-27 05:15:38]  scope=mc23_13p6TeV
[2025-07-27 05:15:38]  status=None
[2025-07-27 05:15:38]  status_code=0
[2025-07-27 05:15:38]  storage_token=
[2025-07-27 05:15:38]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745919735/log.45759878._000070.job.log.tgz.1
[2025-07-27 05:15:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/db/eb/log.45759878._000070.job.log.tgz.1
[2025-07-27 05:15:38]  workdir=None
[2025-07-27 05:15:38] ]
[2025-07-27 05:15:38] 2025-07-27 09:15:13,748 | INFO     | transferring file log.45759878._000070.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745919735/log.45759878._000070.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 05:15:38] 2025-07-27 09:15:13,748 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745919735/log.45759878._000070.job.log.tgz.1 /tmp/boinchome/slots/0/log.45759878._000070.job
[2025-07-27 05:15:38] 2025-07-27 09:15:13,773 | INFO     | adding to output.list: log.45759878._000070.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/db/eb/log.45759878._000070.job.log.tg
[2025-07-27 05:15:38] 2025-07-27 09:15:13,774 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 05:15:38] 2025-07-27 09:15:13,774 | INFO     | summary of transferred files:
[2025-07-27 05:15:38] 2025-07-27 09:15:13,774 | INFO     |  -- lfn=log.45759878._000070.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 05:15:38] 2025-07-27 09:15:13,774 | INFO     | stage-out finished correctly
[2025-07-27 05:15:38] 2025-07-27 09:15:14,690 | INFO     | monitor loop #408: job 0:6745919735 is in state 'finished'
[2025-07-27 05:15:38] 2025-07-27 09:15:14,692 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 05:15:38] 2025-07-27 09:15:16,448 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 05:15:38] 2025-07-27 09:15:17,194 | INFO     | monitor loop #409: job 0:6745919735 is in state 'finished'
[2025-07-27 05:15:38] 2025-07-27 09:15:17,194 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 05:15:38] 2025-07-27 09:15:19,299 | INFO     | job 6745919735 has state=finished
[2025-07-27 05:15:38] 2025-07-27 09:15:19,299 | INFO     | preparing for final server update for job 6745919735 in state='finished'
[2025-07-27 05:15:38] 2025-07-27 09:15:19,364 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-27 05:15:38] 2025-07-27 09:15:19,365 | INFO     | this job has now completed (state=finished)
[2025-07-27 05:15:38] 2025-07-27 09:15:19,365 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 05:15:38] 2025-07-27 09:15:19,365 | INFO     | log transfer has been attempted: DONE
[2025-07-27 05:15:38] 2025-07-27 09:15:19,365 | INFO     | job 6745919735 has finished - writing final server update
[2025-07-27 05:15:38] 2025-07-27 09:15:19,366 | INFO     | total number of processed events: 400 (read)
[2025-07-27 05:15:38] 2025-07-27 09:15:19,367 | INFO     | executing command: lscpu
[2025-07-27 05:15:38] 2025-07-27 09:15:19,429 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 05:15:38] 2025-07-27 09:15:19,698 | INFO     | monitor loop #410: job 0:6745919735 is in state 'finished'
[2025-07-27 05:15:38] 2025-07-27 09:15:19,699 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 05:15:38] 2025-07-27 09:15:22,202 | INFO     | monitor loop #411: job 0:6745919735 is in state 'finished'
[2025-07-27 05:15:38] 2025-07-27 09:15:22,202 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 05:15:38] 2025-07-27 09:15:24,547 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 05:15:38] 2025-07-27 09:15:24,567 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3055.930446428571
[2025-07-27 05:15:38] 2025-07-27 09:15:24,576 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745919735/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 05:15:38] 2025-07-27 09:15:24,577 | INFO     | extracted standard info from prmon json
[2025-07-27 05:15:38] 2025-07-27 09:15:24,577 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 05:15:38] 2025-07-27 09:15:24,577 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 05:15:38] 2025-07-27 09:15:24,578 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 05:15:38] 2025-07-27 09:15:24,578 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 05:15:38] 2025-07-27 09:15:24,580 | INFO     | fitting pss+swap vs Time
[2025-07-27 05:15:38] 2025-07-27 09:15:24,580 | INFO     | sum of square deviations: 183761585.0
[2025-07-27 05:15:38] 2025-07-27 09:15:24,580 | INFO     | sum of deviations: -15640414853.5
[2025-07-27 05:15:38] 2025-07-27 09:15:24,581 | INFO     | mean x: 1753605015.5
[2025-07-27 05:15:38] 2025-07-27 09:15:24,581 | INFO     | mean y: 2490324.154761905
[2025-07-27 05:15:38] 2025-07-27 09:15:24,581 | INFO     | -- intersect: 149256263530.33545
[2025-07-27 05:15:38] 2025-07-27 09:15:24,581 | INFO     | intersect: 149256263530.33545
[2025-07-27 05:15:38] 2025-07-27 09:15:24,581 | INFO     | chi2: 0.19995029519165958
[2025-07-27 05:15:38] 2025-07-27 09:15:24,581 | INFO     | -- intersect: 149256263530.33545
[2025-07-27 05:15:38] 2025-07-27 09:15:24,581 | INFO     | current memory leak: -85.11 B/s (using 84 data points, chi2=0.20)
[2025-07-27 05:15:38] 2025-07-27 09:15:24,582 | INFO     | could have reported an average CPU frequency of 2766 MHz (7 samples)
[2025-07-27 05:15:38] 2025-07-27 09:15:24,582 | INFO     | ..............................
[2025-07-27 05:15:38] 2025-07-27 09:15:24,582 | INFO     | . Timing measurements:
[2025-07-27 05:15:38] 2025-07-27 09:15:24,582 | INFO     | . get job = 0 s
[2025-07-27 05:15:38] 2025-07-27 09:15:24,582 | INFO     | . initial setup = 2 s
[2025-07-27 05:15:38] 2025-07-27 09:15:24,582 | INFO     | . payload setup = 9 s
[2025-07-27 05:15:38] 2025-07-27 09:15:24,582 | INFO     | . stage-in = 0 s
[2025-07-27 05:15:38] 2025-07-27 09:15:24,582 | INFO     | . payload execution = 5535 s
[2025-07-27 05:15:38] 2025-07-27 09:15:24,582 | INFO     | . stage-out = 0 s
[2025-07-27 05:15:38] 2025-07-27 09:15:24,582 | INFO     | . log creation = 0 s
[2025-07-27 05:15:38] 2025-07-27 09:15:24,582 | INFO     | ..............................
[2025-07-27 05:15:38] 2025-07-27 09:15:24,671 | INFO     | 
[2025-07-27 05:15:38] 2025-07-27 09:15:24,671 | INFO     | job summary report
[2025-07-27 05:15:38] 2025-07-27 09:15:24,671 | INFO     | --------------------------------------------------
[2025-07-27 05:15:38] 2025-07-27 09:15:24,671 | INFO     | PanDA job id: 6745919735
[2025-07-27 05:15:38] 2025-07-27 09:15:24,671 | INFO     | task id: 45759878
[2025-07-27 05:15:38] 2025-07-27 09:15:24,671 | INFO     | errors: (none)
[2025-07-27 05:15:38] 2025-07-27 09:15:24,671 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 05:15:38] 2025-07-27 09:15:24,672 | INFO     | pilot state: finished 
[2025-07-27 05:15:38] 2025-07-27 09:15:24,672 | INFO     | transexitcode: 0
[2025-07-27 05:15:38] 2025-07-27 09:15:24,672 | INFO     | exeerrorcode: 0
[2025-07-27 05:15:38] 2025-07-27 09:15:24,672 | INFO     | exeerrordiag: 
[2025-07-27 05:15:38] 2025-07-27 09:15:24,672 | INFO     | exitcode: 0
[2025-07-27 05:15:38] 2025-07-27 09:15:24,672 | INFO     | exitmsg: OK
[2025-07-27 05:15:38] 2025-07-27 09:15:24,672 | INFO     | cpuconsumptiontime: 57236 s
[2025-07-27 05:15:38] 2025-07-27 09:15:24,672 | INFO     | nevents: 400
[2025-07-27 05:15:38] 2025-07-27 09:15:24,672 | INFO     | neventsw: 0
[2025-07-27 05:15:38] 2025-07-27 09:15:24,672 | INFO     | pid: 2242307
[2025-07-27 05:15:38] 2025-07-27 09:15:24,672 | INFO     | pgrp: 2242307
[2025-07-27 05:15:38] 2025-07-27 09:15:24,672 | INFO     | corecount: 12
[2025-07-27 05:15:38] 2025-07-27 09:15:24,672 | INFO     | event service: False
[2025-07-27 05:15:38] 2025-07-27 09:15:24,672 | INFO     | sizes: {0: 2397449, 6: 2397711, 11: 2397739, 5548: 2424238, 5550: 2433236, 5553: 2433292, 5561: 2433614}
[2025-07-27 05:15:38] 2025-07-27 09:15:24,672 | INFO     | --------------------------------------------------
[2025-07-27 05:15:38] 2025-07-27 09:15:24,673 | INFO     | 
[2025-07-27 05:15:38] 2025-07-27 09:15:24,673 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 05:15:38] 2025-07-27 09:15:24,694 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 05:15:38] 2025-07-27 09:15:24,694 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 05:15:38] 2025-07-27 09:15:24,694 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 05:15:38] 2025-07-27 09:15:24,694 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 05:15:38] 2025-07-27 09:15:24,694 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 05:15:38] 2025-07-27 09:15:24,694 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 05:15:38] 2025-07-27 09:15:24,694 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 05:15:38] 2025-07-27 09:15:24,694 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 05:15:38] 2025-07-27 09:15:24,695 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 05:15:38] 2025-07-27 09:15:24,695 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 05:15:38] 2025-07-27 09:15:24,695 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 05:15:38] 2025-07-27 09:15:24,695 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 05:15:38] 2025-07-27 09:15:24,695 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 05:15:38] 2025-07-27 09:15:24,695 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 05:15:38] 2025-07-27 09:15:24,695 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 05:15:38] 2025-07-27 09:15:24,695 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 05:15:38] 2025-07-27 09:15:24,695 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 05:15:38] 2025-07-27 09:15:24,695 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 05:15:38] 2025-07-27 09:15:24,695 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 05:15:38] 2025-07-27 09:15:24,695 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 05:15:38] 2025-07-27 09:15:24,695 | INFO     | job 6745919735 has completed (purged errors)
[2025-07-27 05:15:38] 2025-07-27 09:15:24,696 | INFO     | overall cleanup function is called
[2025-07-27 05:15:38] 2025-07-27 09:15:25,704 | INFO     | --- collectZombieJob: --- 10, [2242307]
[2025-07-27 05:15:38] 2025-07-27 09:15:25,704 | INFO     | zombie collector waiting for pid 2242307
[2025-07-27 05:15:38] 2025-07-27 09:15:25,705 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 05:15:38] 2025-07-27 09:15:25,705 | INFO     | collected zombie processes
[2025-07-27 05:15:38] 2025-07-27 09:15:25,705 | INFO     | will attempt to kill all subprocesses of pid=2242307
[2025-07-27 05:15:38] 2025-07-27 09:15:26,406 | INFO     | PID=2228972 has CPU usage=12.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 05:15:38] 2025-07-27 09:15:26,406 | INFO     | .. there are 10 such processes running
[2025-07-27 05:15:38] 2025-07-27 09:15:26,409 | INFO     | process IDs to be killed: [2242307] (in reverse order)
[2025-07-27 05:15:38] 2025-07-27 09:15:26,484 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 05:15:38] 2025-07-27 09:15:26,484 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 05:15:38] 2025-07-27 09:15:26,495 | INFO     | did not find any defunct processes belonging to 2242307
[2025-07-27 05:15:38] 2025-07-27 09:15:26,505 | INFO     | did not find any defunct processes belonging to 2242307
[2025-07-27 05:15:38] 2025-07-27 09:15:26,505 | INFO     | ready for new job
[2025-07-27 05:15:38] 2025-07-27 09:15:26,505 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 05:15:38] 2025-07-27 09:15:26,507 | INFO     | ***************************************
[2025-07-27 05:15:38] 2025-07-27 09:15:26,507 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 05:15:38] 2025-07-27 09:15:26,507 | INFO     | ***************************************
[2025-07-27 05:15:38] 2025-07-27 09:15:26,507 | INFO     | 
[2025-07-27 05:15:38] 2025-07-27 09:15:26,523 | INFO     | architecture information:
[2025-07-27 05:15:38] 2025-07-27 09:15:26,523 | INFO     | executing command: cat /etc/os-release
[2025-07-27 05:15:38] 2025-07-27 09:15:26,539 | INFO     | cat /etc/os-release:
[2025-07-27 05:15:38] NAME="CentOS Linux"
[2025-07-27 05:15:38] VERSION="7 (Core)"
[2025-07-27 05:15:38] ID="centos"
[2025-07-27 05:15:38] ID_LIKE="rhel fedora"
[2025-07-27 05:15:38] VERSION_ID="7"
[2025-07-27 05:15:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 05:15:38] ANSI_COLOR="0;31"
[2025-07-27 05:15:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 05:15:38] HOME_URL="https://www.centos.org/"
[2025-07-27 05:15:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 05:15:38] 
[2025-07-27 05:15:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 05:15:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 05:15:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 05:15:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 05:15:38] 
[2025-07-27 05:15:38] 2025-07-27 09:15:26,540 | INFO     | ***************************************
[2025-07-27 05:15:38] 2025-07-27 09:15:27,042 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 05:15:38] 2025-07-27 09:15:27,061 | INFO     | sufficient remaining disk space (76288098304 B)
[2025-07-27 05:15:38] 2025-07-27 09:15:27,062 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 05:15:38] 2025-07-27 09:15:27,062 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 05:15:38] 2025-07-27 09:15:27,062 | INFO     | update_server=False
[2025-07-27 05:15:38] 2025-07-27 09:15:27,062 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 05:15:38] 2025-07-27 09:15:27,063 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-27 05:15:38] 2025-07-27 09:15:27,063 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 05:15:38] 2025-07-27 09:15:27,063 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 05:15:38] 2025-07-27 09:15:27,063 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 05:15:38] 2025-07-27 09:15:27,064 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 05:15:38] 2025-07-27 09:15:27,064 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 05:15:38] 2025-07-27 09:15:27,213 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 05:15:38] 2025-07-27 09:15:27,214 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 05:15:38] 2025-07-27 09:15:27,214 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 05:15:38] 2025-07-27 09:15:27,214 | INFO     | will abort loop
[2025-07-27 05:15:38] 2025-07-27 09:15:27,445 | INFO     | all data control threads have been joined
[2025-07-27 05:15:38] 2025-07-27 09:15:27,472 | INFO     | all job control threads have been joined
[2025-07-27 05:15:38] 2025-07-27 09:15:27,954 | INFO     | all payload control threads have been joined
[2025-07-27 05:15:38] 2025-07-27 09:15:28,067 | INFO     | [job] retrieve thread has finished
[2025-07-27 05:15:38] 2025-07-27 09:15:28,106 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 05:15:38] 2025-07-27 09:15:28,116 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 05:15:38] 2025-07-27 09:15:28,219 | INFO     | [job] job monitor thread has finished
[2025-07-27 05:15:38] 2025-07-27 09:15:28,350 | INFO     | [data] copytool_in thread has finished
[2025-07-27 05:15:38] 2025-07-27 09:15:28,374 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 05:15:38] 2025-07-27 09:15:28,450 | INFO     | [data] control thread has finished
[2025-07-27 05:15:38] 2025-07-27 09:15:28,476 | INFO     | [job] control thread has finished
[2025-07-27 05:15:38] 2025-07-27 09:15:28,960 | INFO     | [payload] control thread has finished
[2025-07-27 05:15:38] 2025-07-27 09:15:29,068 | INFO     | [data] copytool_out thread has finished
[2025-07-27 05:15:38] 2025-07-27 09:15:29,101 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 05:15:38] 2025-07-27 09:15:29,110 | INFO     | [payload] validate_post thread has finished
[2025-07-27 05:15:38] 2025-07-27 09:15:29,188 | INFO     | [payload] failed_post thread has finished
[2025-07-27 05:15:38] 2025-07-27 09:15:29,373 | INFO     | [job] validate thread has finished
[2025-07-27 05:15:38] 2025-07-27 09:15:29,681 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 05:15:38] 2025-07-27 09:15:30,687 | INFO     | [job] queue monitor thread has finished
[2025-07-27 05:15:38] 2025-07-27 09:15:31,070 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 05:15:38] 2025-07-27 09:15:32,938 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140043726329664)>', '<ExcThread(monitor, started 140043213584128)>']
[2025-07-27 05:15:38] 2025-07-27 09:15:33,096 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 05:15:38] 2025-07-27 09:15:33,096 | INFO     | [monitor] control thread has ended
[2025-07-27 05:15:38] 2025-07-27 09:15:37,964 | INFO     | all workflow threads have been joined
[2025-07-27 05:15:38] 2025-07-27 09:15:37,964 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 05:15:38] 2025-07-27 09:15:37,965 | INFO     | traces error code: 0
[2025-07-27 05:15:38] 2025-07-27 09:15:37,965 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 05:15:38] 2025-07-27 09:15:38,161 [wrapper] ==== pilot stdout END ====
[2025-07-27 05:15:38] 2025-07-27 09:15:38,165 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 05:15:38] 2025-07-27 09:15:38,169 [wrapper] pilotpid: 2228972
[2025-07-27 05:15:38] 2025-07-27 09:15:38,173 [wrapper] Pilot exit status: 0
[2025-07-27 05:15:38] 2025-07-27 09:15:38,186 [wrapper] pandaids: 6745919735
[2025-07-27 05:15:38] 2025-07-27 09:15:38,264 [wrapper] cleanup supervisor_pilot 2774731 2228973
[2025-07-27 05:15:38] 2025-07-27 09:15:38,268 [wrapper] Test setup, not cleaning
[2025-07-27 05:15:38] 2025-07-27 09:15:38,272 [wrapper] apfmon messages muted
[2025-07-27 05:15:38] 2025-07-27 09:15:38,276 [wrapper] ==== wrapper stdout END ====
[2025-07-27 05:15:38] 2025-07-27 09:15:38,280 [wrapper] ==== wrapper stderr END ====
[2025-07-27 05:15:38]  *** Error codes and diagnostics ***
[2025-07-27 05:15:38]     "exeErrorCode": 0,
[2025-07-27 05:15:38]     "exeErrorDiag": "",
[2025-07-27 05:15:38]     "pilotErrorCode": 0,
[2025-07-27 05:15:38]     "pilotErrorDiag": "",
[2025-07-27 05:15:38]  *** Listing of results directory ***
[2025-07-27 05:15:38] total 397716
[2025-07-27 05:15:38] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 20:36 pilot3.tar.gz
[2025-07-27 05:15:38] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 20:53 queuedata.json
[2025-07-27 05:15:38] -rwx------. 1 boincer umatlas     36292 Jul 26 20:53 runpilot2-wrapper.sh
[2025-07-27 05:15:38] -rw-r--r--. 1 boincer umatlas       100 Jul 27 03:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 05:15:38] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 03:42 run_atlas
[2025-07-27 05:15:38] -rw-r--r--. 1 boincer umatlas       105 Jul 27 03:42 job.xml
[2025-07-27 05:15:38] -rw-r--r--. 2 boincer umatlas 232929802 Jul 27 03:42 EVNT.45759873._000003.pool.root.1
[2025-07-27 05:15:38] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 03:42 start_atlas.sh
[2025-07-27 05:15:38] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 03:42 shared
[2025-07-27 05:15:38] -rw-r--r--. 2 boincer umatlas    542879 Jul 27 03:42 input.tar.gz
[2025-07-27 05:15:38] -rw-r--r--. 1 boincer umatlas         0 Jul 27 03:42 boinc_lockfile
[2025-07-27 05:15:38] -rw-r--r--. 1 boincer umatlas      2542 Jul 27 03:42 pandaJob.out
[2025-07-27 05:15:38] -rw-------. 1 boincer umatlas    980125 Jul 27 03:42 agis_schedconf.cvmfs.json
[2025-07-27 05:15:38] -rw-------. 1 boincer umatlas   1593052 Jul 27 03:42 agis_ddmendpoints.agis.ALL.json
[2025-07-27 05:15:38] drwx------. 4 boincer umatlas      4096 Jul 27 03:42 pilot3
[2025-07-27 05:15:38] -rw-r--r--. 1 boincer umatlas      6841 Jul 27 05:09 init_data.xml
[2025-07-27 05:15:38] -rw-------. 1 boincer umatlas 168606922 Jul 27 05:14 HITS.45759878._000070.pool.root.1
[2025-07-27 05:15:38] -rw-r--r--. 1 boincer umatlas       529 Jul 27 05:14 boinc_task_state.xml
[2025-07-27 05:15:38] -rw-------. 1 boincer umatlas      1040 Jul 27 05:15 memory_monitor_summary.json
[2025-07-27 05:15:38] -rw-------. 1 boincer umatlas    384363 Jul 27 05:15 log.45759878._000070.job.log.tgz.1
[2025-07-27 05:15:38] -rw-------. 1 boincer umatlas        95 Jul 27 05:15 pilot_heartbeat.json
[2025-07-27 05:15:38] -rw-------. 1 boincer umatlas      7819 Jul 27 05:15 heartbeat.json
[2025-07-27 05:15:38] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 05:15 boinc_mmap_file
[2025-07-27 05:15:38] -rw-r--r--. 1 boincer umatlas        27 Jul 27 05:15 wrapper_checkpoint.txt
[2025-07-27 05:15:38] -rw-------. 1 boincer umatlas      4666 Jul 27 05:15 pilotlog.txt
[2025-07-27 05:15:38] -rw-------. 1 boincer umatlas    541129 Jul 27 05:15 log.45759878._000070.job.log.1
[2025-07-27 05:15:38] -rw-------. 1 boincer umatlas       357 Jul 27 05:15 output.list
[2025-07-27 05:15:38] -rw-r--r--. 1 boincer umatlas       620 Jul 27 05:15 runtime_log
[2025-07-27 05:15:38] -rw-------. 1 boincer umatlas    942080 Jul 27 05:15 result.tar.gz
[2025-07-27 05:15:38] -rw-------. 1 boincer umatlas       656 Jul 27 05:15 sRtNDmqo4z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIiTLDmpTiAen.diag
[2025-07-27 05:15:38] -rw-r--r--. 1 boincer umatlas      8662 Jul 27 05:15 runtime_log.err
[2025-07-27 05:15:38] -rw-r--r--. 1 boincer umatlas     21999 Jul 27 05:15 stderr.txt
[2025-07-27 05:15:38] HITS file was successfully produced:
[2025-07-27 05:15:38] -rw-------. 1 boincer umatlas 168606922 Jul 27 05:14 shared/HITS.pool.root.1
[2025-07-27 05:15:38]  *** Contents of shared directory: ***
[2025-07-27 05:15:38] total 393600
[2025-07-27 05:15:38] -rw-r--r--. 2 boincer umatlas 232929802 Jul 27 03:42 ATLAS.root_0
[2025-07-27 05:15:38] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 03:42 start_atlas.sh
[2025-07-27 05:15:38] -rw-r--r--. 2 boincer umatlas    542879 Jul 27 03:42 input.tar.gz
[2025-07-27 05:15:38] -rw-------. 1 boincer umatlas 168606922 Jul 27 05:14 HITS.pool.root.1
[2025-07-27 05:15:38] -rw-------. 1 boincer umatlas    942080 Jul 27 05:15 result.tar.gz
05:15:39 (2219926): run_atlas exited; CPU time 57303.968906
05:15:39 (2219926): called boinc_finish(0)

</stderr_txt>
]]>

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