Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:01:25 (1928091): wrapper (7.7.26015): starting
02:01:25 (1928091): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 02:01:25] Arguments: --nthreads 8
[2025-07-27 02:01:25] Threads: 8
[2025-07-27 02:01:25] Checking for CVMFS
[2025-07-27 02:01:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 02:01:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 02:01:25] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 02:01:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 02:01:25] 2.13.1.0 5097 13590 198628 148801 3 196 24287163 40960000 9280 16776704 0 36688154 99.927 17632074 43573 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 02:01:25] CVMFS is ok
[2025-07-27 02:01:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 02:01:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 02:01:25] Further information can be found at the LHC@home message board.
[2025-07-27 02:01:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 02:01:25] Checking for apptainer binary...
[2025-07-27 02:01:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 02:01:25] Running /usr/bin/apptainer --version
[2025-07-27 02:01:25] apptainer version 1.4.1-1.el9
[2025-07-27 02:01:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 02:01:26] c-212-6.aglt2.org
[2025-07-27 02:01:26] apptainer works
[2025-07-27 02:01:26] Set ATHENA_PROC_NUMBER=8
[2025-07-27 02:01:26] Set ATHENA_CORE_NUMBER=8
[2025-07-27 02:01:26] Starting ATLAS job with PandaID=6745775485
[2025-07-27 02:01:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 03:22:40]  *** The last 200 lines of the pilot log: ***
[2025-07-27 03:22:40]  scope=mc23_13p6TeV
[2025-07-27 03:22:40]  status=None
[2025-07-27 03:22:40]  status_code=0
[2025-07-27 03:22:40]  storage_token=
[2025-07-27 03:22:40]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6745775485/log.45743349._044852.job.log.tgz.1
[2025-07-27 03:22:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/54/log.45743349._044852.job.log.tgz.1
[2025-07-27 03:22:40]  workdir=None
[2025-07-27 03:22:40] ]
[2025-07-27 03:22:40] 2025-07-27 07:21:57,559 | INFO     | transferring file log.45743349._044852.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6745775485/log.45743349._044852.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 03:22:40] 2025-07-27 07:21:57,559 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6745775485/log.45743349._044852.job.log.tgz.1 /tmp/boinchome/slots/5/log.45743349._044852.job
[2025-07-27 03:22:40] 2025-07-27 07:21:57,586 | INFO     | adding to output.list: log.45743349._044852.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/54/log.45743349._044852.job.log.tg
[2025-07-27 03:22:40] 2025-07-27 07:21:57,587 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 03:22:40] 2025-07-27 07:21:57,587 | INFO     | summary of transferred files:
[2025-07-27 03:22:40] 2025-07-27 07:21:57,587 | INFO     |  -- lfn=log.45743349._044852.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 03:22:40] 2025-07-27 07:21:57,587 | INFO     | stage-out finished correctly
[2025-07-27 03:22:40] 2025-07-27 07:21:59,296 | INFO     | monitor loop #353: job 0:6745775485 is in state 'finished'
[2025-07-27 03:22:40] 2025-07-27 07:21:59,296 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:22:40] 2025-07-27 07:22:00,224 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 03:22:40] 2025-07-27 07:22:00,780 | INFO     | job 6745775485 has state=finished
[2025-07-27 03:22:40] 2025-07-27 07:22:00,780 | INFO     | preparing for final server update for job 6745775485 in state='finished'
[2025-07-27 03:22:40] 2025-07-27 07:22:00,781 | INFO     | this job has now completed (state=finished)
[2025-07-27 03:22:40] 2025-07-27 07:22:00,781 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 03:22:40] 2025-07-27 07:22:00,781 | INFO     | log transfer has been attempted: DONE
[2025-07-27 03:22:40] 2025-07-27 07:22:00,781 | INFO     | job 6745775485 has finished - writing final server update
[2025-07-27 03:22:40] 2025-07-27 07:22:00,781 | INFO     | total number of processed events: 400 (read)
[2025-07-27 03:22:40] 2025-07-27 07:22:00,782 | INFO     | executing command: lscpu
[2025-07-27 03:22:40] 2025-07-27 07:22:00,845 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 03:22:40] 2025-07-27 07:22:01,802 | INFO     | monitor loop #354: job 0:6745775485 is in state 'finished'
[2025-07-27 03:22:40] 2025-07-27 07:22:01,802 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:22:40] 2025-07-27 07:22:04,308 | INFO     | monitor loop #355: job 0:6745775485 is in state 'finished'
[2025-07-27 03:22:40] 2025-07-27 07:22:04,308 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:22:40] 2025-07-27 07:22:06,813 | INFO     | monitor loop #356: job 0:6745775485 is in state 'finished'
[2025-07-27 03:22:40] 2025-07-27 07:22:06,813 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:22:40] 2025-07-27 07:22:06,935 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 03:22:40] 2025-07-27 07:22:06,946 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3291.0551250000003
[2025-07-27 03:22:40] 2025-07-27 07:22:06,972 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6745775485/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 03:22:40] 2025-07-27 07:22:06,974 | INFO     | extracted standard info from prmon json
[2025-07-27 03:22:40] 2025-07-27 07:22:06,976 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 03:22:40] 2025-07-27 07:22:06,976 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 03:22:40] 2025-07-27 07:22:06,976 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 03:22:40] 2025-07-27 07:22:06,976 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 03:22:40] 2025-07-27 07:22:06,978 | INFO     | fitting pss+swap vs Time
[2025-07-27 03:22:40] 2025-07-27 07:22:06,978 | INFO     | sum of square deviations: 115715658.0
[2025-07-27 03:22:40] 2025-07-27 07:22:06,979 | INFO     | sum of deviations: 802866628.0000001
[2025-07-27 03:22:40] 2025-07-27 07:22:06,979 | INFO     | mean x: 1753598595.5
[2025-07-27 03:22:40] 2025-07-27 07:22:06,979 | INFO     | mean y: 2511509.3333333335
[2025-07-27 03:22:40] 2025-07-27 07:22:06,979 | INFO     | -- intersect: -12164431284.481321
[2025-07-27 03:22:40] 2025-07-27 07:22:06,979 | INFO     | intersect: -12164431284.481321
[2025-07-27 03:22:40] 2025-07-27 07:22:06,979 | INFO     | chi2: 0.0008749164010412319
[2025-07-27 03:22:40] 2025-07-27 07:22:06,979 | INFO     | -- intersect: -12164431284.481321
[2025-07-27 03:22:40] 2025-07-27 07:22:06,980 | INFO     | current memory leak: 6.94 B/s (using 72 data points, chi2=0.00)
[2025-07-27 03:22:40] 2025-07-27 07:22:06,980 | INFO     | could have reported an average CPU frequency of 3293 MHz (6 samples)
[2025-07-27 03:22:40] 2025-07-27 07:22:06,980 | INFO     | ..............................
[2025-07-27 03:22:40] 2025-07-27 07:22:06,980 | INFO     | . Timing measurements:
[2025-07-27 03:22:40] 2025-07-27 07:22:06,980 | INFO     | . get job = 0 s
[2025-07-27 03:22:40] 2025-07-27 07:22:06,980 | INFO     | . initial setup = 2 s
[2025-07-27 03:22:40] 2025-07-27 07:22:06,981 | INFO     | . payload setup = 7 s
[2025-07-27 03:22:40] 2025-07-27 07:22:06,981 | INFO     | . stage-in = 0 s
[2025-07-27 03:22:40] 2025-07-27 07:22:06,981 | INFO     | . payload execution = 4793 s
[2025-07-27 03:22:40] 2025-07-27 07:22:06,981 | INFO     | . stage-out = 0 s
[2025-07-27 03:22:40] 2025-07-27 07:22:06,983 | INFO     | . log creation = 0 s
[2025-07-27 03:22:40] 2025-07-27 07:22:06,983 | INFO     | ..............................
[2025-07-27 03:22:40] 2025-07-27 07:22:07,071 | INFO     | 
[2025-07-27 03:22:40] 2025-07-27 07:22:07,072 | INFO     | job summary report
[2025-07-27 03:22:40] 2025-07-27 07:22:07,072 | INFO     | --------------------------------------------------
[2025-07-27 03:22:40] 2025-07-27 07:22:07,072 | INFO     | PanDA job id: 6745775485
[2025-07-27 03:22:40] 2025-07-27 07:22:07,072 | INFO     | task id: 45743349
[2025-07-27 03:22:40] 2025-07-27 07:22:07,072 | INFO     | errors: (none)
[2025-07-27 03:22:40] 2025-07-27 07:22:07,072 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 03:22:40] 2025-07-27 07:22:07,072 | INFO     | pilot state: finished 
[2025-07-27 03:22:40] 2025-07-27 07:22:07,073 | INFO     | transexitcode: 0
[2025-07-27 03:22:40] 2025-07-27 07:22:07,077 | INFO     | exeerrorcode: 0
[2025-07-27 03:22:40] 2025-07-27 07:22:07,077 | INFO     | exeerrordiag: 
[2025-07-27 03:22:40] 2025-07-27 07:22:07,077 | INFO     | exitcode: 0
[2025-07-27 03:22:40] 2025-07-27 07:22:07,077 | INFO     | exitmsg: OK
[2025-07-27 03:22:40] 2025-07-27 07:22:07,077 | INFO     | cpuconsumptiontime: 35427 s
[2025-07-27 03:22:40] 2025-07-27 07:22:07,077 | INFO     | nevents: 400
[2025-07-27 03:22:40] 2025-07-27 07:22:07,078 | INFO     | neventsw: 0
[2025-07-27 03:22:40] 2025-07-27 07:22:07,078 | INFO     | pid: 1943621
[2025-07-27 03:22:40] 2025-07-27 07:22:07,078 | INFO     | pgrp: 1943621
[2025-07-27 03:22:40] 2025-07-27 07:22:07,078 | INFO     | corecount: 8
[2025-07-27 03:22:40] 2025-07-27 07:22:07,078 | INFO     | event service: False
[2025-07-27 03:22:40] 2025-07-27 07:22:07,078 | INFO     | sizes: {0: 2397473, 5: 2397735, 11: 2397791, 4804: 2423930, 4805: 2432928, 4807: 2432984, 4814: 2433306}
[2025-07-27 03:22:40] 2025-07-27 07:22:07,078 | INFO     | --------------------------------------------------
[2025-07-27 03:22:40] 2025-07-27 07:22:07,078 | INFO     | 
[2025-07-27 03:22:40] 2025-07-27 07:22:07,078 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-07-27 03:22:40] 2025-07-27 07:22:07,118 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 03:22:40] 2025-07-27 07:22:07,119 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 03:22:40] 2025-07-27 07:22:07,120 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 03:22:40] 2025-07-27 07:22:07,120 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 03:22:40] 2025-07-27 07:22:07,120 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 03:22:40] 2025-07-27 07:22:07,120 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 03:22:40] 2025-07-27 07:22:07,120 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 03:22:40] 2025-07-27 07:22:07,120 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 03:22:40] 2025-07-27 07:22:07,121 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 03:22:40] 2025-07-27 07:22:07,121 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 03:22:40] 2025-07-27 07:22:07,121 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 03:22:40] 2025-07-27 07:22:07,121 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 03:22:40] 2025-07-27 07:22:07,121 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 03:22:40] 2025-07-27 07:22:07,121 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 03:22:40] 2025-07-27 07:22:07,121 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 03:22:40] 2025-07-27 07:22:07,121 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 03:22:40] 2025-07-27 07:22:07,121 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 03:22:40] 2025-07-27 07:22:07,121 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 03:22:40] 2025-07-27 07:22:07,121 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 03:22:40] 2025-07-27 07:22:07,121 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 03:22:40] 2025-07-27 07:22:07,122 | INFO     | job 6745775485 has completed (purged errors)
[2025-07-27 03:22:40] 2025-07-27 07:22:07,122 | INFO     | overall cleanup function is called
[2025-07-27 03:22:40] 2025-07-27 07:22:07,343 | INFO     | PID=1931735 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 03:22:40] 2025-07-27 07:22:07,344 | INFO     | .. there are 17 such processes running
[2025-07-27 03:22:40] 2025-07-27 07:22:08,131 | INFO     | --- collectZombieJob: --- 10, [1943621]
[2025-07-27 03:22:40] 2025-07-27 07:22:08,131 | INFO     | zombie collector waiting for pid 1943621
[2025-07-27 03:22:40] 2025-07-27 07:22:08,131 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 03:22:40] 2025-07-27 07:22:08,131 | INFO     | collected zombie processes
[2025-07-27 03:22:40] 2025-07-27 07:22:08,132 | INFO     | will attempt to kill all subprocesses of pid=1943621
[2025-07-27 03:22:40] 2025-07-27 07:22:08,517 | INFO     | process IDs to be killed: [1943621] (in reverse order)
[2025-07-27 03:22:40] 2025-07-27 07:22:08,634 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 03:22:40] 2025-07-27 07:22:08,635 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 03:22:40] 2025-07-27 07:22:08,651 | INFO     | did not find any defunct processes belonging to 1943621
[2025-07-27 03:22:40] 2025-07-27 07:22:08,665 | INFO     | did not find any defunct processes belonging to 1943621
[2025-07-27 03:22:40] 2025-07-27 07:22:08,665 | INFO     | ready for new job
[2025-07-27 03:22:40] 2025-07-27 07:22:08,665 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 03:22:40] 2025-07-27 07:22:08,667 | INFO     | ***************************************
[2025-07-27 03:22:40] 2025-07-27 07:22:08,670 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 03:22:40] 2025-07-27 07:22:08,670 | INFO     | ***************************************
[2025-07-27 03:22:40] 2025-07-27 07:22:08,670 | INFO     | 
[2025-07-27 03:22:40] 2025-07-27 07:22:08,675 | INFO     | architecture information:
[2025-07-27 03:22:40] 2025-07-27 07:22:08,675 | INFO     | executing command: cat /etc/os-release
[2025-07-27 03:22:40] 2025-07-27 07:22:08,694 | INFO     | cat /etc/os-release:
[2025-07-27 03:22:40] NAME="CentOS Linux"
[2025-07-27 03:22:40] VERSION="7 (Core)"
[2025-07-27 03:22:40] ID="centos"
[2025-07-27 03:22:40] ID_LIKE="rhel fedora"
[2025-07-27 03:22:40] VERSION_ID="7"
[2025-07-27 03:22:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 03:22:40] ANSI_COLOR="0;31"
[2025-07-27 03:22:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 03:22:40] HOME_URL="https://www.centos.org/"
[2025-07-27 03:22:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 03:22:40] 
[2025-07-27 03:22:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 03:22:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 03:22:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 03:22:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 03:22:40] 
[2025-07-27 03:22:40] 2025-07-27 07:22:08,695 | INFO     | ***************************************
[2025-07-27 03:22:40] 2025-07-27 07:22:09,197 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-07-27 03:22:40] 2025-07-27 07:22:09,217 | INFO     | sufficient remaining disk space (123960557568 B)
[2025-07-27 03:22:40] 2025-07-27 07:22:09,217 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 03:22:40] 2025-07-27 07:22:09,217 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 03:22:40] 2025-07-27 07:22:09,218 | INFO     | update_server=False
[2025-07-27 03:22:40] 2025-07-27 07:22:09,218 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 03:22:40] 2025-07-27 07:22:09,245 | INFO     | all job control threads have been joined
[2025-07-27 03:22:40] 2025-07-27 07:22:09,318 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 03:22:40] 2025-07-27 07:22:09,318 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 03:22:40] 2025-07-27 07:22:09,319 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 03:22:40] 2025-07-27 07:22:09,319 | INFO     | will abort loop
[2025-07-27 03:22:40] 2025-07-27 07:22:10,081 | INFO     | all data control threads have been joined
[2025-07-27 03:22:40] 2025-07-27 07:22:10,224 | INFO     | [job] retrieve thread has finished
[2025-07-27 03:22:40] 2025-07-27 07:22:10,251 | INFO     | [job] control thread has finished
[2025-07-27 03:22:40] 2025-07-27 07:22:10,283 | INFO     | all payload control threads have been joined
[2025-07-27 03:22:40] 2025-07-27 07:22:10,321 | INFO     | [job] job monitor thread has finished
[2025-07-27 03:22:40] 2025-07-27 07:22:10,422 | INFO     | [payload] failed_post thread has finished
[2025-07-27 03:22:40] 2025-07-27 07:22:10,486 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 03:22:40] 2025-07-27 07:22:10,571 | INFO     | [job] validate thread has finished
[2025-07-27 03:22:40] 2025-07-27 07:22:10,694 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 03:22:40] 2025-07-27 07:22:10,715 | INFO     | [payload] validate_post thread has finished
[2025-07-27 03:22:40] 2025-07-27 07:22:10,812 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 03:22:40] 2025-07-27 07:22:11,086 | INFO     | [data] control thread has finished
[2025-07-27 03:22:40] 2025-07-27 07:22:11,096 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 03:22:40] 2025-07-27 07:22:11,107 | INFO     | [data] copytool_in thread has finished
[2025-07-27 03:22:40] 2025-07-27 07:22:11,289 | INFO     | [payload] control thread has finished
[2025-07-27 03:22:40] 2025-07-27 07:22:11,354 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 03:22:40] 2025-07-27 07:22:11,568 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 03:22:40] 2025-07-27 07:22:12,077 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 03:22:40] 2025-07-27 07:22:12,701 | INFO     | [data] copytool_out thread has finished
[2025-07-27 03:22:40] 2025-07-27 07:22:13,082 | INFO     | [job] queue monitor thread has finished
[2025-07-27 03:22:40] 2025-07-27 07:22:14,820 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 03:22:40] 2025-07-27 07:22:16,908 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139884089206592)>', '<ExcThread(monitor, started 139883326732032)>']
[2025-07-27 03:22:40] 2025-07-27 07:22:21,934 | INFO     | all workflow threads have been joined
[2025-07-27 03:22:40] 2025-07-27 07:22:21,934 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 03:22:40] 2025-07-27 07:22:21,935 | INFO     | traces error code: 0
[2025-07-27 03:22:40] 2025-07-27 07:22:21,935 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 03:22:40] 2025-07-27 07:22:39,844 | INFO     | PID=1931735 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 03:22:40] 2025-07-27 07:22:39,845 | INFO     | .. there are 18 such processes running
[2025-07-27 03:22:40] 2025-07-27 07:22:39,845 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 03:22:40] 2025-07-27 07:22:39,845 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 03:22:40] 2025-07-27 07:22:39,846 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 03:22:40] 2025-07-27 07:22:39,846 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 03:22:40] 2025-07-27 07:22:39,846 | INFO     | [monitor] control thread has ended
[2025-07-27 03:22:40] 2025-07-27 07:22:39,938 [wrapper] ==== pilot stdout END ====
[2025-07-27 03:22:40] 2025-07-27 07:22:39,945 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 03:22:40] 2025-07-27 07:22:39,950 [wrapper] pilotpid: 1931735
[2025-07-27 03:22:40] 2025-07-27 07:22:39,956 [wrapper] Pilot exit status: 0
[2025-07-27 03:22:40] 2025-07-27 07:22:39,974 [wrapper] pandaids: 6745775485
[2025-07-27 03:22:40] 2025-07-27 07:22:40,072 [wrapper] cleanup supervisor_pilot 2201132 1931736
[2025-07-27 03:22:40] 2025-07-27 07:22:40,079 [wrapper] Test setup, not cleaning
[2025-07-27 03:22:40] 2025-07-27 07:22:40,085 [wrapper] apfmon messages muted
[2025-07-27 03:22:40] 2025-07-27 07:22:40,087 [wrapper] ==== wrapper stdout END ====
[2025-07-27 03:22:40] 2025-07-27 07:22:40,092 [wrapper] ==== wrapper stderr END ====
[2025-07-27 03:22:40]  *** Error codes and diagnostics ***
[2025-07-27 03:22:40]     "exeErrorCode": 0,
[2025-07-27 03:22:40]     "exeErrorDiag": "",
[2025-07-27 03:22:40]     "pilotErrorCode": 0,
[2025-07-27 03:22:40]     "pilotErrorDiag": "",
[2025-07-27 03:22:40]  *** Listing of results directory ***
[2025-07-27 03:22:40] total 349220
[2025-07-27 03:22:40] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 17:23 pilot3.tar.gz
[2025-07-27 03:22:40] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 17:30 queuedata.json
[2025-07-27 03:22:40] -rwx------. 1 boincer umatlas     36292 Jul 26 17:31 runpilot2-wrapper.sh
[2025-07-27 03:22:40] -rw-r--r--. 1 boincer umatlas       100 Jul 27 02:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 03:22:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 02:01 run_atlas
[2025-07-27 03:22:40] -rw-r--r--. 1 boincer umatlas       105 Jul 27 02:01 job.xml
[2025-07-27 03:22:40] -rw-r--r--. 2 boincer umatlas 143820758 Jul 27 02:01 EVNT.45743347._002566.pool.root.1
[2025-07-27 03:22:40] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 02:01 start_atlas.sh
[2025-07-27 03:22:40] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 02:01 shared
[2025-07-27 03:22:40] -rw-r--r--. 2 boincer umatlas    542893 Jul 27 02:01 input.tar.gz
[2025-07-27 03:22:40] -rw-r--r--. 1 boincer umatlas         0 Jul 27 02:01 boinc_lockfile
[2025-07-27 03:22:40] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 02:01 pandaJob.out
[2025-07-27 03:22:40] -rw-------. 1 boincer umatlas    980109 Jul 27 02:01 agis_schedconf.cvmfs.json
[2025-07-27 03:22:40] -rw-------. 1 boincer umatlas   1593052 Jul 27 02:01 agis_ddmendpoints.agis.ALL.json
[2025-07-27 03:22:40] drwx------. 4 boincer umatlas      4096 Jul 27 02:01 pilot3
[2025-07-27 03:22:40] -rw-r--r--. 1 boincer umatlas      6944 Jul 27 03:09 init_data.xml
[2025-07-27 03:22:40] -rw-r--r--. 1 boincer umatlas       529 Jul 27 03:21 boinc_task_state.xml
[2025-07-27 03:22:40] -rw-------. 1 boincer umatlas 208360416 Jul 27 03:21 HITS.45743349._044852.pool.root.1
[2025-07-27 03:22:40] -rw-------. 1 boincer umatlas      1027 Jul 27 03:21 memory_monitor_summary.json
[2025-07-27 03:22:40] -rw-------. 1 boincer umatlas    296333 Jul 27 03:21 log.45743349._044852.job.log.tgz.1
[2025-07-27 03:22:40] -rw-------. 1 boincer umatlas      7761 Jul 27 03:22 heartbeat.json
[2025-07-27 03:22:40] -rw-r--r--. 1 boincer umatlas        27 Jul 27 03:22 wrapper_checkpoint.txt
[2025-07-27 03:22:40] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 03:22 boinc_mmap_file
[2025-07-27 03:22:40] -rw-------. 1 boincer umatlas        95 Jul 27 03:22 pilot_heartbeat.json
[2025-07-27 03:22:40] -rw-------. 1 boincer umatlas       823 Jul 27 03:22 pilotlog.txt
[2025-07-27 03:22:40] -rw-------. 1 boincer umatlas    472645 Jul 27 03:22 log.45743349._044852.job.log.1
[2025-07-27 03:22:40] -rw-------. 1 boincer umatlas       357 Jul 27 03:22 output.list
[2025-07-27 03:22:40] -rw-r--r--. 1 boincer umatlas       620 Jul 27 03:22 runtime_log
[2025-07-27 03:22:40] -rw-------. 1 boincer umatlas    788480 Jul 27 03:22 result.tar.gz
[2025-07-27 03:22:40] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 03:22 runtime_log.err
[2025-07-27 03:22:40] -rw-------. 1 boincer umatlas       651 Jul 27 03:22 Ql9NDmMf1z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlDTLDmIEN0Yn.diag
[2025-07-27 03:22:40] -rw-r--r--. 1 boincer umatlas     22054 Jul 27 03:22 stderr.txt
[2025-07-27 03:22:40] HITS file was successfully produced:
[2025-07-27 03:22:40] -rw-------. 1 boincer umatlas 208360416 Jul 27 03:21 shared/HITS.pool.root.1
[2025-07-27 03:22:40]  *** Contents of shared directory: ***
[2025-07-27 03:22:40] total 345260
[2025-07-27 03:22:40] -rw-r--r--. 2 boincer umatlas 143820758 Jul 27 02:01 ATLAS.root_0
[2025-07-27 03:22:40] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 02:01 start_atlas.sh
[2025-07-27 03:22:40] -rw-r--r--. 2 boincer umatlas    542893 Jul 27 02:01 input.tar.gz
[2025-07-27 03:22:40] -rw-------. 1 boincer umatlas 208360416 Jul 27 03:21 HITS.pool.root.1
[2025-07-27 03:22:40] -rw-------. 1 boincer umatlas    788480 Jul 27 03:22 result.tar.gz
03:22:41 (1928091): run_atlas exited; CPU time 35522.663682
03:22:41 (1928091): called boinc_finish(0)

</stderr_txt>
]]>

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