Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:42:59 (8137): wrapper (7.7.26015): starting
01:42:59 (8137): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 01:42:59] Arguments: --nthreads 12
[2025-07-27 01:42:59] Threads: 12
[2025-07-27 01:42:59] Checking for CVMFS
[2025-07-27 01:42:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 01:42:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 01:42:59] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 01:42:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 01:42:59] 2.11.2.0 2979 111597 102548 148801 0 56 15690685 20275201 1 130560 0 37765329 99.971 9502099 10557 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 01:42:59] CVMFS is ok
[2025-07-27 01:42:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 01:42:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 01:42:59] Further information can be found at the LHC@home message board.
[2025-07-27 01:42:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 01:42:59] Checking for apptainer binary...
[2025-07-27 01:42:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 01:42:59] Running /usr/bin/apptainer --version
[2025-07-27 01:42:59] apptainer version 1.3.2-1.el7
[2025-07-27 01:42:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 01:43:01] c-205-7.aglt2.org
[2025-07-27 01:43:01] apptainer works
[2025-07-27 01:43:01] Set ATHENA_PROC_NUMBER=12
[2025-07-27 01:43:01] Set ATHENA_CORE_NUMBER=12
[2025-07-27 01:43:01] Starting ATLAS job with PandaID=6745918508
[2025-07-27 01:43:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 03:21:06]  *** The last 200 lines of the pilot log: ***
[2025-07-27 03:21:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 03:21:06]  replicas=None
[2025-07-27 03:21:06]  scope=mc23_13p6TeV
[2025-07-27 03:21:06]  status=None
[2025-07-27 03:21:06]  status_code=0
[2025-07-27 03:21:06]  storage_token=
[2025-07-27 03:21:06]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745918508/log.45758877._000101.job.log.tgz.1
[2025-07-27 03:21:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/33/48/log.45758877._000101.job.log.tgz.1
[2025-07-27 03:21:06]  workdir=None
[2025-07-27 03:21:06] ]
[2025-07-27 03:21:06] 2025-07-27 07:20:26,975 | INFO     | transferring file log.45758877._000101.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745918508/log.45758877._000101.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 03:21:06] 2025-07-27 07:20:26,975 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745918508/log.45758877._000101.job.log.tgz.1 /tmp/boinchome/slots/0/log.45758877._000101.job
[2025-07-27 03:21:06] 2025-07-27 07:20:26,998 | INFO     | adding to output.list: log.45758877._000101.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/33/48/log.45758877._000101.job.log.tg
[2025-07-27 03:21:06] 2025-07-27 07:20:26,998 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 03:21:06] 2025-07-27 07:20:26,999 | INFO     | summary of transferred files:
[2025-07-27 03:21:06] 2025-07-27 07:20:26,999 | INFO     |  -- lfn=log.45758877._000101.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 03:21:06] 2025-07-27 07:20:26,999 | INFO     | stage-out finished correctly
[2025-07-27 03:21:06] 2025-07-27 07:20:27,391 | WARNING  | process 18228 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 03:21:06] 2025-07-27 07:20:27,391 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745918508/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 03:21:06] 2025-07-27 07:20:27,478 | INFO     | number of running child processes to parent process 18228: 1
[2025-07-27 03:21:06] 2025-07-27 07:20:27,478 | INFO     | maximum number of monitored processes: 6
[2025-07-27 03:21:06] 2025-07-27 07:20:28,140 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 03:21:06] 2025-07-27 07:20:29,060 | INFO     | job 6745918508 has state=finished
[2025-07-27 03:21:06] 2025-07-27 07:20:29,060 | INFO     | preparing for final server update for job 6745918508 in state='finished'
[2025-07-27 03:21:06] 2025-07-27 07:20:29,061 | INFO     | this job has now completed (state=finished)
[2025-07-27 03:21:06] 2025-07-27 07:20:29,061 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 03:21:06] 2025-07-27 07:20:29,061 | INFO     | log transfer has been attempted: DONE
[2025-07-27 03:21:06] 2025-07-27 07:20:29,061 | INFO     | job 6745918508 has finished - writing final server update
[2025-07-27 03:21:06] 2025-07-27 07:20:29,062 | INFO     | total number of processed events: 400 (read)
[2025-07-27 03:21:06] 2025-07-27 07:20:29,063 | INFO     | executing command: lscpu
[2025-07-27 03:21:06] 2025-07-27 07:20:29,090 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 03:21:06] 2025-07-27 07:20:29,981 | INFO     | monitor loop #431: job 0:6745918508 is in state 'finished'
[2025-07-27 03:21:06] 2025-07-27 07:20:29,981 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:21:06] 2025-07-27 07:20:32,484 | INFO     | monitor loop #432: job 0:6745918508 is in state 'finished'
[2025-07-27 03:21:06] 2025-07-27 07:20:32,484 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:21:06] 2025-07-27 07:20:33,347 | INFO     | 5841s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-27 03:21:06] 2025-07-27 07:20:33,793 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 03:21:06] 2025-07-27 07:20:33,797 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-07-27 03:21:06] 2025-07-27 07:20:33,798 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745918508/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 03:21:06] 2025-07-27 07:20:33,799 | INFO     | extracted standard info from prmon json
[2025-07-27 03:21:06] 2025-07-27 07:20:33,799 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 03:21:06] 2025-07-27 07:20:33,799 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 03:21:06] 2025-07-27 07:20:33,799 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 03:21:06] 2025-07-27 07:20:33,799 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 03:21:06] 2025-07-27 07:20:33,801 | INFO     | fitting pss+swap vs Time
[2025-07-27 03:21:06] 2025-07-27 07:20:33,801 | INFO     | sum of square deviations: 218571540.0
[2025-07-27 03:21:06] 2025-07-27 07:20:33,802 | INFO     | sum of deviations: -8287687103.0
[2025-07-27 03:21:06] 2025-07-27 07:20:33,802 | INFO     | mean x: 1753598014.0
[2025-07-27 03:21:06] 2025-07-27 07:20:33,802 | INFO     | mean y: 2749693.0561797754
[2025-07-27 03:21:06] 2025-07-27 07:20:33,802 | INFO     | -- intersect: 66494808286.20245
[2025-07-27 03:21:06] 2025-07-27 07:20:33,802 | INFO     | intersect: 66494808286.20245
[2025-07-27 03:21:06] 2025-07-27 07:20:33,802 | INFO     | chi2: 0.12173449470499215
[2025-07-27 03:21:06] 2025-07-27 07:20:33,803 | INFO     | -- intersect: 66494808286.20245
[2025-07-27 03:21:06] 2025-07-27 07:20:33,803 | INFO     | current memory leak: -37.92 B/s (using 89 data points, chi2=0.12)
[2025-07-27 03:21:06] 2025-07-27 07:20:33,803 | INFO     | could have reported an average CPU frequency of 2150 MHz (7 samples)
[2025-07-27 03:21:06] 2025-07-27 07:20:33,803 | INFO     | ..............................
[2025-07-27 03:21:06] 2025-07-27 07:20:33,803 | INFO     | . Timing measurements:
[2025-07-27 03:21:06] 2025-07-27 07:20:33,803 | INFO     | . get job = 0 s
[2025-07-27 03:21:06] 2025-07-27 07:20:33,803 | INFO     | . initial setup = 2 s
[2025-07-27 03:21:06] 2025-07-27 07:20:33,804 | INFO     | . payload setup = 9 s
[2025-07-27 03:21:06] 2025-07-27 07:20:33,804 | INFO     | . stage-in = 0 s
[2025-07-27 03:21:06] 2025-07-27 07:20:33,804 | INFO     | . payload execution = 5802 s
[2025-07-27 03:21:06] 2025-07-27 07:20:33,804 | INFO     | . stage-out = 0 s
[2025-07-27 03:21:06] 2025-07-27 07:20:33,804 | INFO     | . log creation = 0 s
[2025-07-27 03:21:06] 2025-07-27 07:20:33,804 | INFO     | ..............................
[2025-07-27 03:21:06] 2025-07-27 07:20:33,888 | INFO     | 
[2025-07-27 03:21:06] 2025-07-27 07:20:33,888 | INFO     | job summary report
[2025-07-27 03:21:06] 2025-07-27 07:20:33,888 | INFO     | --------------------------------------------------
[2025-07-27 03:21:06] 2025-07-27 07:20:33,889 | INFO     | PanDA job id: 6745918508
[2025-07-27 03:21:06] 2025-07-27 07:20:33,889 | INFO     | task id: 45758877
[2025-07-27 03:21:06] 2025-07-27 07:20:33,889 | INFO     | errors: (none)
[2025-07-27 03:21:06] 2025-07-27 07:20:33,889 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 03:21:06] 2025-07-27 07:20:33,889 | INFO     | pilot state: finished 
[2025-07-27 03:21:06] 2025-07-27 07:20:33,889 | INFO     | transexitcode: 0
[2025-07-27 03:21:06] 2025-07-27 07:20:33,890 | INFO     | exeerrorcode: 0
[2025-07-27 03:21:06] 2025-07-27 07:20:33,890 | INFO     | exeerrordiag: 
[2025-07-27 03:21:06] 2025-07-27 07:20:33,890 | INFO     | exitcode: 0
[2025-07-27 03:21:06] 2025-07-27 07:20:33,890 | INFO     | exitmsg: OK
[2025-07-27 03:21:06] 2025-07-27 07:20:33,890 | INFO     | cpuconsumptiontime: 62747 s
[2025-07-27 03:21:06] 2025-07-27 07:20:33,890 | INFO     | nevents: 400
[2025-07-27 03:21:06] 2025-07-27 07:20:33,891 | INFO     | neventsw: 0
[2025-07-27 03:21:06] 2025-07-27 07:20:33,891 | INFO     | pid: 18228
[2025-07-27 03:21:06] 2025-07-27 07:20:33,891 | INFO     | pgrp: 18228
[2025-07-27 03:21:06] 2025-07-27 07:20:33,891 | INFO     | corecount: 12
[2025-07-27 03:21:06] 2025-07-27 07:20:33,891 | INFO     | event service: False
[2025-07-27 03:21:06] 2025-07-27 07:20:33,892 | INFO     | sizes: {0: 2397482, 5: 2397744, 11: 2397800, 5815: 2424505, 5816: 2433503, 5817: 2433559, 5823: 2433881}
[2025-07-27 03:21:06] 2025-07-27 07:20:33,892 | INFO     | --------------------------------------------------
[2025-07-27 03:21:06] 2025-07-27 07:20:33,892 | INFO     | 
[2025-07-27 03:21:06] 2025-07-27 07:20:33,892 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 03:21:06] 2025-07-27 07:20:33,915 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 03:21:06] 2025-07-27 07:20:33,916 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 03:21:06] 2025-07-27 07:20:33,916 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 03:21:06] 2025-07-27 07:20:33,916 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 03:21:06] 2025-07-27 07:20:33,916 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 03:21:06] 2025-07-27 07:20:33,916 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 03:21:06] 2025-07-27 07:20:33,917 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 03:21:06] 2025-07-27 07:20:33,917 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 03:21:06] 2025-07-27 07:20:33,917 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 03:21:06] 2025-07-27 07:20:33,917 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 03:21:06] 2025-07-27 07:20:33,917 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 03:21:06] 2025-07-27 07:20:33,917 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 03:21:06] 2025-07-27 07:20:33,918 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 03:21:06] 2025-07-27 07:20:33,918 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 03:21:06] 2025-07-27 07:20:33,918 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 03:21:06] 2025-07-27 07:20:33,918 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 03:21:06] 2025-07-27 07:20:33,918 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 03:21:06] 2025-07-27 07:20:33,918 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 03:21:06] 2025-07-27 07:20:33,919 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 03:21:06] 2025-07-27 07:20:33,919 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 03:21:06] 2025-07-27 07:20:33,919 | INFO     | job 6745918508 has completed (purged errors)
[2025-07-27 03:21:06] 2025-07-27 07:20:33,919 | INFO     | overall cleanup function is called
[2025-07-27 03:21:06] 2025-07-27 07:20:34,465 | INFO     | PID=11807 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 03:21:06] 2025-07-27 07:20:34,927 | INFO     | --- collectZombieJob: --- 10, [18228]
[2025-07-27 03:21:06] 2025-07-27 07:20:34,927 | INFO     | zombie collector waiting for pid 18228
[2025-07-27 03:21:06] 2025-07-27 07:20:34,927 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 03:21:06] 2025-07-27 07:20:34,928 | INFO     | collected zombie processes
[2025-07-27 03:21:06] 2025-07-27 07:20:34,928 | INFO     | will attempt to kill all subprocesses of pid=18228
[2025-07-27 03:21:06] 2025-07-27 07:20:35,018 | INFO     | process IDs to be killed: [18228] (in reverse order)
[2025-07-27 03:21:06] 2025-07-27 07:20:35,155 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 03:21:06] 2025-07-27 07:20:35,155 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 03:21:06] 2025-07-27 07:20:35,159 | INFO     | did not find any defunct processes belonging to 18228
[2025-07-27 03:21:06] 2025-07-27 07:20:35,162 | INFO     | did not find any defunct processes belonging to 18228
[2025-07-27 03:21:06] 2025-07-27 07:20:35,162 | INFO     | ready for new job
[2025-07-27 03:21:06] 2025-07-27 07:20:35,163 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 03:21:06] 2025-07-27 07:20:35,164 | INFO     | ***************************************
[2025-07-27 03:21:06] 2025-07-27 07:20:35,164 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 03:21:06] 2025-07-27 07:20:35,164 | INFO     | ***************************************
[2025-07-27 03:21:06] 2025-07-27 07:20:35,165 | INFO     | 
[2025-07-27 03:21:06] 2025-07-27 07:20:35,165 | INFO     | architecture information:
[2025-07-27 03:21:06] 2025-07-27 07:20:35,166 | INFO     | executing command: cat /etc/os-release
[2025-07-27 03:21:06] 2025-07-27 07:20:35,181 | INFO     | cat /etc/os-release:
[2025-07-27 03:21:06] NAME="CentOS Linux"
[2025-07-27 03:21:06] VERSION="7 (Core)"
[2025-07-27 03:21:06] ID="centos"
[2025-07-27 03:21:06] ID_LIKE="rhel fedora"
[2025-07-27 03:21:06] VERSION_ID="7"
[2025-07-27 03:21:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 03:21:06] ANSI_COLOR="0;31"
[2025-07-27 03:21:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 03:21:06] HOME_URL="https://www.centos.org/"
[2025-07-27 03:21:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 03:21:06] 
[2025-07-27 03:21:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 03:21:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 03:21:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 03:21:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 03:21:06] 
[2025-07-27 03:21:06] 2025-07-27 07:20:35,181 | INFO     | ***************************************
[2025-07-27 03:21:06] 2025-07-27 07:20:35,684 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 03:21:06] 2025-07-27 07:20:35,701 | INFO     | sufficient remaining disk space (29365370880 B)
[2025-07-27 03:21:06] 2025-07-27 07:20:35,701 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 03:21:06] 2025-07-27 07:20:35,702 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 03:21:06] 2025-07-27 07:20:35,702 | INFO     | update_server=False
[2025-07-27 03:21:06] 2025-07-27 07:20:35,702 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 03:21:06] 2025-07-27 07:20:35,702 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 03:21:06] 2025-07-27 07:20:35,703 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 03:21:06] 2025-07-27 07:20:35,855 | INFO     | all job control threads have been joined
[2025-07-27 03:21:06] 2025-07-27 07:20:35,992 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 03:21:06] 2025-07-27 07:20:35,992 | INFO     | aborting loop
[2025-07-27 03:21:06] 2025-07-27 07:20:36,285 | INFO     | all payload control threads have been joined
[2025-07-27 03:21:06] 2025-07-27 07:20:36,562 | INFO     | all data control threads have been joined
[2025-07-27 03:21:06] 2025-07-27 07:20:36,703 | INFO     | [job] retrieve thread has finished
[2025-07-27 03:21:06] 2025-07-27 07:20:36,708 | INFO     | [job] queue monitor thread has finished
[2025-07-27 03:21:06] 2025-07-27 07:20:36,734 | INFO     | [payload] validate_post thread has finished
[2025-07-27 03:21:06] 2025-07-27 07:20:36,856 | INFO     | [job] control thread has finished
[2025-07-27 03:21:06] 2025-07-27 07:20:36,993 | INFO     | [job] job monitor thread has finished
[2025-07-27 03:21:06] 2025-07-27 07:20:37,225 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 03:21:06] 2025-07-27 07:20:37,289 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 03:21:06] 2025-07-27 07:20:37,290 | INFO     | [payload] control thread has finished
[2025-07-27 03:21:06] 2025-07-27 07:20:37,300 | INFO     | [job] validate thread has finished
[2025-07-27 03:21:06] 2025-07-27 07:20:37,564 | INFO     | [data] control thread has finished
[2025-07-27 03:21:06] 2025-07-27 07:20:37,709 | INFO     | [data] copytool_out thread has finished
[2025-07-27 03:21:06] 2025-07-27 07:20:37,739 | INFO     | [payload] failed_post thread has finished
[2025-07-27 03:21:06] 2025-07-27 07:20:38,010 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 03:21:06] 2025-07-27 07:20:38,147 | INFO     | [data] copytool_in thread has finished
[2025-07-27 03:21:06] 2025-07-27 07:20:38,732 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 03:21:06] 2025-07-27 07:20:42,738 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 03:21:06] 2025-07-27 07:20:46,054 | INFO     | job.realtimelogging is not enabled
[2025-07-27 03:21:06] 2025-07-27 07:20:47,059 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 03:21:06] 2025-07-27 07:20:48,055 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140093485201216)>', '<ExcThread(monitor, started 140092773496576)>']
[2025-07-27 03:21:06] 2025-07-27 07:20:53,075 | INFO     | all workflow threads have been joined
[2025-07-27 03:21:06] 2025-07-27 07:20:53,075 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 03:21:06] 2025-07-27 07:20:53,086 | INFO     | traces error code: 0
[2025-07-27 03:21:06] 2025-07-27 07:20:53,086 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 03:21:06] 2025-07-27 07:21:06,664 | INFO     | PID=11807 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 03:21:06] 2025-07-27 07:21:06,665 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 03:21:06] 2025-07-27 07:21:06,665 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 03:21:06] 2025-07-27 07:21:06,665 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 03:21:06] 2025-07-27 07:21:06,665 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 03:21:06] 2025-07-27 07:21:06,665 | INFO     | [monitor] control thread has ended
[2025-07-27 03:21:06] 2025-07-27 07:21:06,759 [wrapper] ==== pilot stdout END ====
[2025-07-27 03:21:06] 2025-07-27 07:21:06,762 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 03:21:06] 2025-07-27 07:21:06,766 [wrapper] pilotpid: 11807
[2025-07-27 03:21:06] 2025-07-27 07:21:06,770 [wrapper] Pilot exit status: 0
[2025-07-27 03:21:06] 2025-07-27 07:21:06,786 [wrapper] pandaids: 6745918508
[2025-07-27 03:21:06] 2025-07-27 07:21:06,825 [wrapper] cleanup supervisor_pilot  5402 11808
[2025-07-27 03:21:06] 2025-07-27 07:21:06,829 [wrapper] Test setup, not cleaning
[2025-07-27 03:21:06] 2025-07-27 07:21:06,834 [wrapper] apfmon messages muted
[2025-07-27 03:21:06] 2025-07-27 07:21:06,838 [wrapper] ==== wrapper stdout END ====
[2025-07-27 03:21:06] 2025-07-27 07:21:06,841 [wrapper] ==== wrapper stderr END ====
[2025-07-27 03:21:06]  *** Error codes and diagnostics ***
[2025-07-27 03:21:06]     "exeErrorCode": 0,
[2025-07-27 03:21:06]     "exeErrorDiag": "",
[2025-07-27 03:21:06]     "pilotErrorCode": 0,
[2025-07-27 03:21:06]     "pilotErrorDiag": "",
[2025-07-27 03:21:06]  *** Listing of results directory ***
[2025-07-27 03:21:06] total 410648
[2025-07-27 03:21:06] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 19:58 pilot3.tar.gz
[2025-07-27 03:21:06] -rwx------ 1 boincer umatlas     36292 Jul 26 20:23 runpilot2-wrapper.sh
[2025-07-27 03:21:06] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 20:23 queuedata.json
[2025-07-27 03:21:06] -rw-r--r-- 1 boincer umatlas       100 Jul 27 01:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 03:21:06] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 01:42 run_atlas
[2025-07-27 03:21:06] -rw-r--r-- 1 boincer umatlas       105 Jul 27 01:42 job.xml
[2025-07-27 03:21:06] -rw-r--r-- 2 boincer umatlas 237052334 Jul 27 01:42 EVNT.45758875._000005.pool.root.1
[2025-07-27 03:21:06] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 01:42 start_atlas.sh
[2025-07-27 03:21:06] drwxrwx--x 2 boincer umatlas      4096 Jul 27 01:42 shared
[2025-07-27 03:21:06] -rw-r--r-- 2 boincer umatlas    542881 Jul 27 01:42 input.tar.gz
[2025-07-27 03:21:06] -rw-r--r-- 1 boincer umatlas         0 Jul 27 01:42 boinc_lockfile
[2025-07-27 03:21:06] -rw-r--r-- 1 boincer umatlas      2576 Jul 27 01:43 pandaJob.out
[2025-07-27 03:21:06] -rw------- 1 boincer umatlas    980109 Jul 27 01:43 agis_schedconf.cvmfs.json
[2025-07-27 03:21:06] -rw------- 1 boincer umatlas   1593052 Jul 27 01:43 agis_ddmendpoints.agis.ALL.json
[2025-07-27 03:21:06] drwx------ 4 boincer umatlas      4096 Jul 27 01:43 pilot3
[2025-07-27 03:21:06] -rw-r--r-- 1 boincer umatlas      5867 Jul 27 03:19 init_data.xml
[2025-07-27 03:21:06] -rw------- 1 boincer umatlas 177769797 Jul 27 03:19 HITS.45758877._000101.pool.root.1
[2025-07-27 03:21:06] -rw------- 1 boincer umatlas      1048 Jul 27 03:20 memory_monitor_summary.json
[2025-07-27 03:21:06] -rw-r--r-- 1 boincer umatlas       530 Jul 27 03:20 boinc_task_state.xml
[2025-07-27 03:21:06] -rw------- 1 boincer umatlas    360024 Jul 27 03:20 log.45758877._000101.job.log.tgz.1
[2025-07-27 03:21:06] -rw------- 1 boincer umatlas        95 Jul 27 03:20 pilot_heartbeat.json
[2025-07-27 03:21:06] -rw------- 1 boincer umatlas      7841 Jul 27 03:20 heartbeat.json
[2025-07-27 03:21:06] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 03:20 boinc_mmap_file
[2025-07-27 03:21:06] -rw-r--r-- 1 boincer umatlas        27 Jul 27 03:20 wrapper_checkpoint.txt
[2025-07-27 03:21:06] -rw------- 1 boincer umatlas       745 Jul 27 03:21 pilotlog.txt
[2025-07-27 03:21:06] -rw------- 1 boincer umatlas    545372 Jul 27 03:21 log.45758877._000101.job.log.1
[2025-07-27 03:21:06] -rw------- 1 boincer umatlas       357 Jul 27 03:21 output.list
[2025-07-27 03:21:06] -rw-r--r-- 1 boincer umatlas       620 Jul 27 03:21 runtime_log
[2025-07-27 03:21:06] -rw------- 1 boincer umatlas    921600 Jul 27 03:21 result.tar.gz
[2025-07-27 03:21:06] -rw-r--r-- 1 boincer umatlas      8657 Jul 27 03:21 runtime_log.err
[2025-07-27 03:21:06] -rw------- 1 boincer umatlas       658 Jul 27 03:21 pS9NDmzL4z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmscTLDmbEBDRn.diag
[2025-07-27 03:21:06] -rw-r--r-- 1 boincer umatlas     21996 Jul 27 03:21 stderr.txt
[2025-07-27 03:21:06] HITS file was successfully produced:
[2025-07-27 03:21:06] -rw------- 1 boincer umatlas 177769797 Jul 27 03:19 shared/HITS.pool.root.1
[2025-07-27 03:21:06]  *** Contents of shared directory: ***
[2025-07-27 03:21:06] total 406556
[2025-07-27 03:21:06] -rw-r--r-- 2 boincer umatlas 237052334 Jul 27 01:42 ATLAS.root_0
[2025-07-27 03:21:06] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 01:42 start_atlas.sh
[2025-07-27 03:21:06] -rw-r--r-- 2 boincer umatlas    542881 Jul 27 01:42 input.tar.gz
[2025-07-27 03:21:06] -rw------- 1 boincer umatlas 177769797 Jul 27 03:19 HITS.pool.root.1
[2025-07-27 03:21:06] -rw------- 1 boincer umatlas    921600 Jul 27 03:21 result.tar.gz
03:21:08 (8137): run_atlas exited; CPU time 62719.681624
03:21:08 (8137): called boinc_finish(0)

</stderr_txt>
]]>

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