Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:32:16 (11602): wrapper (7.7.26015): starting
01:32:16 (11602): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 01:32:16] Arguments: --nthreads 12
[2025-07-27 01:32:16] Threads: 12
[2025-07-27 01:32:16] Checking for CVMFS
[2025-07-27 01:32:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 01:32:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 01:32:16] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 01:32:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 01:32:16] 2.11.2.0 3081 111539 99936 148801 2 56 14720297 20275201 1 130560 0 37760174 99.969 9616469 10512 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 01:32:16] CVMFS is ok
[2025-07-27 01:32:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 01:32:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 01:32:16] Further information can be found at the LHC@home message board.
[2025-07-27 01:32:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 01:32:16] Checking for apptainer binary...
[2025-07-27 01:32:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 01:32:16] Running /usr/bin/apptainer --version
[2025-07-27 01:32:16] apptainer version 1.3.2-1.el7
[2025-07-27 01:32:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 01:32:18] c-205-29.aglt2.org
[2025-07-27 01:32:18] apptainer works
[2025-07-27 01:32:18] Set ATHENA_PROC_NUMBER=12
[2025-07-27 01:32:18] Set ATHENA_CORE_NUMBER=12
[2025-07-27 01:32:18] Starting ATLAS job with PandaID=6745919182
[2025-07-27 01:32:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 03:14:23]  *** The last 200 lines of the pilot log: ***
[2025-07-27 03:14:23]  is_tar=False
[2025-07-27 03:14:23]  lfn=log.45758458._000046.job.log.tgz.1
[2025-07-27 03:14:23]  mtime=0
[2025-07-27 03:14:23]  protocol_id=None
[2025-07-27 03:14:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 03:14:23]  replicas=None
[2025-07-27 03:14:23]  scope=mc23_13p6TeV
[2025-07-27 03:14:23]  status=None
[2025-07-27 03:14:23]  status_code=0
[2025-07-27 03:14:23]  storage_token=
[2025-07-27 03:14:23]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745919182/log.45758458._000046.job.log.tgz.1
[2025-07-27 03:14:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/ac/log.45758458._000046.job.log.tgz.1
[2025-07-27 03:14:23]  workdir=None
[2025-07-27 03:14:23] ]
[2025-07-27 03:14:23] 2025-07-27 07:13:43,031 | INFO     | transferring file log.45758458._000046.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745919182/log.45758458._000046.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 03:14:23] 2025-07-27 07:13:43,031 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745919182/log.45758458._000046.job.log.tgz.1 /tmp/boinchome/slots/0/log.45758458._000046.job
[2025-07-27 03:14:23] 2025-07-27 07:13:43,054 | INFO     | adding to output.list: log.45758458._000046.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/ac/log.45758458._000046.job.log.tg
[2025-07-27 03:14:23] 2025-07-27 07:13:43,054 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 03:14:23] 2025-07-27 07:13:43,055 | INFO     | summary of transferred files:
[2025-07-27 03:14:23] 2025-07-27 07:13:43,055 | INFO     |  -- lfn=log.45758458._000046.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 03:14:23] 2025-07-27 07:13:43,055 | INFO     | stage-out finished correctly
[2025-07-27 03:14:23] 2025-07-27 07:13:43,811 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 03:14:23] 2025-07-27 07:13:45,121 | INFO     | monitor loop #451: job 0:6745919182 is in state 'finished'
[2025-07-27 03:14:23] 2025-07-27 07:13:45,121 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:14:23] 2025-07-27 07:13:46,094 | INFO     | job 6745919182 has state=finished
[2025-07-27 03:14:23] 2025-07-27 07:13:46,094 | INFO     | preparing for final server update for job 6745919182 in state='finished'
[2025-07-27 03:14:23] 2025-07-27 07:13:46,095 | INFO     | this job has now completed (state=finished)
[2025-07-27 03:14:23] 2025-07-27 07:13:46,095 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 03:14:23] 2025-07-27 07:13:46,095 | INFO     | log transfer has been attempted: DONE
[2025-07-27 03:14:23] 2025-07-27 07:13:46,095 | INFO     | job 6745919182 has finished - writing final server update
[2025-07-27 03:14:23] 2025-07-27 07:13:46,096 | INFO     | total number of processed events: 400 (read)
[2025-07-27 03:14:23] 2025-07-27 07:13:46,097 | INFO     | executing command: lscpu
[2025-07-27 03:14:23] 2025-07-27 07:13:46,123 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 03:14:23] 2025-07-27 07:13:47,624 | INFO     | monitor loop #452: job 0:6745919182 is in state 'finished'
[2025-07-27 03:14:23] 2025-07-27 07:13:47,625 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:14:23] 2025-07-27 07:13:50,127 | INFO     | monitor loop #453: job 0:6745919182 is in state 'finished'
[2025-07-27 03:14:23] 2025-07-27 07:13:50,127 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:14:23] 2025-07-27 07:13:50,849 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 03:14:23] 2025-07-27 07:13:50,853 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-07-27 03:14:23] 2025-07-27 07:13:50,855 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745919182/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 03:14:23] 2025-07-27 07:13:50,855 | INFO     | extracted standard info from prmon json
[2025-07-27 03:14:23] 2025-07-27 07:13:50,856 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 03:14:23] 2025-07-27 07:13:50,856 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 03:14:23] 2025-07-27 07:13:50,856 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 03:14:23] 2025-07-27 07:13:50,856 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 03:14:23] 2025-07-27 07:13:50,858 | INFO     | fitting pss+swap vs Time
[2025-07-27 03:14:23] 2025-07-27 07:13:50,858 | INFO     | sum of square deviations: 241429643.0
[2025-07-27 03:14:23] 2025-07-27 07:13:50,859 | INFO     | sum of deviations: -13669890678.500002
[2025-07-27 03:14:23] 2025-07-27 07:13:50,859 | INFO     | mean x: 1753597463.5
[2025-07-27 03:14:23] 2025-07-27 07:13:50,859 | INFO     | mean y: 2766743.3586956523
[2025-07-27 03:14:23] 2025-07-27 07:13:50,859 | INFO     | -- intersect: 99292503174.52219
[2025-07-27 03:14:23] 2025-07-27 07:13:50,859 | INFO     | intersect: 99292503174.52219
[2025-07-27 03:14:23] 2025-07-27 07:13:50,859 | INFO     | chi2: 0.10431938947080699
[2025-07-27 03:14:23] 2025-07-27 07:13:50,859 | INFO     | -- intersect: 99292503174.52219
[2025-07-27 03:14:23] 2025-07-27 07:13:50,860 | INFO     | current memory leak: -56.62 B/s (using 92 data points, chi2=0.10)
[2025-07-27 03:14:23] 2025-07-27 07:13:50,860 | INFO     | could have reported an average CPU frequency of 2130 MHz (7 samples)
[2025-07-27 03:14:23] 2025-07-27 07:13:50,860 | INFO     | ..............................
[2025-07-27 03:14:23] 2025-07-27 07:13:50,860 | INFO     | . Timing measurements:
[2025-07-27 03:14:23] 2025-07-27 07:13:50,860 | INFO     | . get job = 0 s
[2025-07-27 03:14:23] 2025-07-27 07:13:50,860 | INFO     | . initial setup = 2 s
[2025-07-27 03:14:23] 2025-07-27 07:13:50,860 | INFO     | . payload setup = 9 s
[2025-07-27 03:14:23] 2025-07-27 07:13:50,861 | INFO     | . stage-in = 0 s
[2025-07-27 03:14:23] 2025-07-27 07:13:50,861 | INFO     | . payload execution = 6041 s
[2025-07-27 03:14:23] 2025-07-27 07:13:50,861 | INFO     | . stage-out = 0 s
[2025-07-27 03:14:23] 2025-07-27 07:13:50,861 | INFO     | . log creation = 0 s
[2025-07-27 03:14:23] 2025-07-27 07:13:50,861 | INFO     | ..............................
[2025-07-27 03:14:23] 2025-07-27 07:13:51,033 | INFO     | 
[2025-07-27 03:14:23] 2025-07-27 07:13:51,033 | INFO     | job summary report
[2025-07-27 03:14:23] 2025-07-27 07:13:51,033 | INFO     | --------------------------------------------------
[2025-07-27 03:14:23] 2025-07-27 07:13:51,034 | INFO     | PanDA job id: 6745919182
[2025-07-27 03:14:23] 2025-07-27 07:13:51,034 | INFO     | task id: 45758458
[2025-07-27 03:14:23] 2025-07-27 07:13:51,034 | INFO     | errors: (none)
[2025-07-27 03:14:23] 2025-07-27 07:13:51,034 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 03:14:23] 2025-07-27 07:13:51,034 | INFO     | pilot state: finished 
[2025-07-27 03:14:23] 2025-07-27 07:13:51,034 | INFO     | transexitcode: 0
[2025-07-27 03:14:23] 2025-07-27 07:13:51,035 | INFO     | exeerrorcode: 0
[2025-07-27 03:14:23] 2025-07-27 07:13:51,035 | INFO     | exeerrordiag: 
[2025-07-27 03:14:23] 2025-07-27 07:13:51,035 | INFO     | exitcode: 0
[2025-07-27 03:14:23] 2025-07-27 07:13:51,035 | INFO     | exitmsg: OK
[2025-07-27 03:14:23] 2025-07-27 07:13:51,035 | INFO     | cpuconsumptiontime: 66969 s
[2025-07-27 03:14:23] 2025-07-27 07:13:51,035 | INFO     | nevents: 400
[2025-07-27 03:14:23] 2025-07-27 07:13:51,035 | INFO     | neventsw: 0
[2025-07-27 03:14:23] 2025-07-27 07:13:51,036 | INFO     | pid: 21632
[2025-07-27 03:14:23] 2025-07-27 07:13:51,036 | INFO     | pgrp: 21632
[2025-07-27 03:14:23] 2025-07-27 07:13:51,036 | INFO     | corecount: 12
[2025-07-27 03:14:23] 2025-07-27 07:13:51,036 | INFO     | event service: False
[2025-07-27 03:14:23] 2025-07-27 07:13:51,036 | INFO     | sizes: {0: 2397469, 1: 2397469, 5: 2397759, 11: 2397815, 6054: 2424571, 6055: 2424570, 6056: 2433808, 6063: 2433946}
[2025-07-27 03:14:23] 2025-07-27 07:13:51,036 | INFO     | --------------------------------------------------
[2025-07-27 03:14:23] 2025-07-27 07:13:51,037 | INFO     | 
[2025-07-27 03:14:23] 2025-07-27 07:13:51,037 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 03:14:23] 2025-07-27 07:13:51,062 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 03:14:23] 2025-07-27 07:13:51,062 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 03:14:23] 2025-07-27 07:13:51,063 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 03:14:23] 2025-07-27 07:13:51,063 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 03:14:23] 2025-07-27 07:13:51,063 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 03:14:23] 2025-07-27 07:13:51,063 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 03:14:23] 2025-07-27 07:13:51,063 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 03:14:23] 2025-07-27 07:13:51,064 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 03:14:23] 2025-07-27 07:13:51,064 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 03:14:23] 2025-07-27 07:13:51,064 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 03:14:23] 2025-07-27 07:13:51,064 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 03:14:23] 2025-07-27 07:13:51,064 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 03:14:23] 2025-07-27 07:13:51,064 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 03:14:23] 2025-07-27 07:13:51,065 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 03:14:23] 2025-07-27 07:13:51,065 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 03:14:23] 2025-07-27 07:13:51,065 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 03:14:23] 2025-07-27 07:13:51,065 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 03:14:23] 2025-07-27 07:13:51,065 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 03:14:23] 2025-07-27 07:13:51,065 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 03:14:23] 2025-07-27 07:13:51,065 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 03:14:23] 2025-07-27 07:13:51,065 | INFO     | job 6745919182 has completed (purged errors)
[2025-07-27 03:14:23] 2025-07-27 07:13:51,066 | INFO     | overall cleanup function is called
[2025-07-27 03:14:23] 2025-07-27 07:13:52,073 | INFO     | --- collectZombieJob: --- 10, [21632]
[2025-07-27 03:14:23] 2025-07-27 07:13:52,073 | INFO     | zombie collector waiting for pid 21632
[2025-07-27 03:14:23] 2025-07-27 07:13:52,073 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 03:14:23] 2025-07-27 07:13:52,073 | INFO     | collected zombie processes
[2025-07-27 03:14:23] 2025-07-27 07:13:52,074 | INFO     | will attempt to kill all subprocesses of pid=21632
[2025-07-27 03:14:23] 2025-07-27 07:13:52,162 | INFO     | process IDs to be killed: [21632] (in reverse order)
[2025-07-27 03:14:23] 2025-07-27 07:13:52,215 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 03:14:23] 2025-07-27 07:13:52,215 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 03:14:23] 2025-07-27 07:13:52,219 | INFO     | did not find any defunct processes belonging to 21632
[2025-07-27 03:14:23] 2025-07-27 07:13:52,222 | INFO     | did not find any defunct processes belonging to 21632
[2025-07-27 03:14:23] 2025-07-27 07:13:52,222 | INFO     | ready for new job
[2025-07-27 03:14:23] 2025-07-27 07:13:52,222 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 03:14:23] 2025-07-27 07:13:52,224 | INFO     | ***************************************
[2025-07-27 03:14:23] 2025-07-27 07:13:52,224 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 03:14:23] 2025-07-27 07:13:52,224 | INFO     | ***************************************
[2025-07-27 03:14:23] 2025-07-27 07:13:52,224 | INFO     | 
[2025-07-27 03:14:23] 2025-07-27 07:13:52,225 | INFO     | architecture information:
[2025-07-27 03:14:23] 2025-07-27 07:13:52,225 | INFO     | executing command: cat /etc/os-release
[2025-07-27 03:14:23] 2025-07-27 07:13:52,239 | INFO     | cat /etc/os-release:
[2025-07-27 03:14:23] NAME="CentOS Linux"
[2025-07-27 03:14:23] VERSION="7 (Core)"
[2025-07-27 03:14:23] ID="centos"
[2025-07-27 03:14:23] ID_LIKE="rhel fedora"
[2025-07-27 03:14:23] VERSION_ID="7"
[2025-07-27 03:14:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 03:14:23] ANSI_COLOR="0;31"
[2025-07-27 03:14:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 03:14:23] HOME_URL="https://www.centos.org/"
[2025-07-27 03:14:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 03:14:23] 
[2025-07-27 03:14:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 03:14:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 03:14:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 03:14:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 03:14:23] 
[2025-07-27 03:14:23] 2025-07-27 07:13:52,240 | INFO     | ***************************************
[2025-07-27 03:14:23] 2025-07-27 07:13:52,743 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 03:14:23] 2025-07-27 07:13:52,758 | INFO     | sufficient remaining disk space (29382148096 B)
[2025-07-27 03:14:23] 2025-07-27 07:13:52,758 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 03:14:23] 2025-07-27 07:13:52,758 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 03:14:23] 2025-07-27 07:13:52,758 | INFO     | update_server=False
[2025-07-27 03:14:23] 2025-07-27 07:13:52,759 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 03:14:23] 2025-07-27 07:13:52,759 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 03:14:23] 2025-07-27 07:13:52,932 | INFO     | all payload control threads have been joined
[2025-07-27 03:14:23] 2025-07-27 07:13:52,987 | INFO     | all job control threads have been joined
[2025-07-27 03:14:23] 2025-07-27 07:13:53,429 | INFO     | all data control threads have been joined
[2025-07-27 03:14:23] 2025-07-27 07:13:53,644 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 03:14:23] 2025-07-27 07:13:53,644 | INFO     | aborting loop
[2025-07-27 03:14:23] 2025-07-27 07:13:53,654 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 03:14:23] 2025-07-27 07:13:53,760 | INFO     | [job] retrieve thread has finished
[2025-07-27 03:14:23] 2025-07-27 07:13:53,764 | INFO     | [job] queue monitor thread has finished
[2025-07-27 03:14:23] 2025-07-27 07:13:53,937 | INFO     | [payload] control thread has finished
[2025-07-27 03:14:23] 2025-07-27 07:13:53,990 | INFO     | [payload] failed_post thread has finished
[2025-07-27 03:14:23] 2025-07-27 07:13:53,993 | INFO     | [job] control thread has finished
[2025-07-27 03:14:23] 2025-07-27 07:13:54,217 | INFO     | [data] copytool_in thread has finished
[2025-07-27 03:14:23] 2025-07-27 07:13:54,230 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 03:14:23] 2025-07-27 07:13:54,404 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 03:14:23] 2025-07-27 07:13:54,435 | INFO     | [data] control thread has finished
[2025-07-27 03:14:23] 2025-07-27 07:13:54,553 | INFO     | [payload] validate_post thread has finished
[2025-07-27 03:14:23] 2025-07-27 07:13:54,649 | INFO     | [job] job monitor thread has finished
[2025-07-27 03:14:23] 2025-07-27 07:13:55,032 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 03:14:23] 2025-07-27 07:13:55,069 | INFO     | [job] validate thread has finished
[2025-07-27 03:14:23] 2025-07-27 07:13:55,118 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 03:14:23] 2025-07-27 07:13:55,659 | INFO     | [data] copytool_out thread has finished
[2025-07-27 03:14:23] 2025-07-27 07:13:58,410 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 03:14:23] 2025-07-27 07:14:03,333 | INFO     | job.realtimelogging is not enabled
[2025-07-27 03:14:23] 2025-07-27 07:14:04,338 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 03:14:23] 2025-07-27 07:14:04,637 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140102054176576)>', '<ExcThread(monitor, started 140100952385280)>']
[2025-07-27 03:14:23] 2025-07-27 07:14:09,662 | INFO     | all workflow threads have been joined
[2025-07-27 03:14:23] 2025-07-27 07:14:09,662 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 03:14:23] 2025-07-27 07:14:09,666 | INFO     | traces error code: 0
[2025-07-27 03:14:23] 2025-07-27 07:14:09,666 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 03:14:23] 2025-07-27 07:14:23,349 | INFO     | PID=15209 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 03:14:23] 2025-07-27 07:14:23,350 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 03:14:23] 2025-07-27 07:14:23,350 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 03:14:23] 2025-07-27 07:14:23,350 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 03:14:23] 2025-07-27 07:14:23,350 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 03:14:23] 2025-07-27 07:14:23,350 | INFO     | [monitor] control thread has ended
[2025-07-27 03:14:23] 2025-07-27 07:14:23,434 [wrapper] ==== pilot stdout END ====
[2025-07-27 03:14:23] 2025-07-27 07:14:23,438 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 03:14:23] 2025-07-27 07:14:23,442 [wrapper] pilotpid: 15209
[2025-07-27 03:14:23] 2025-07-27 07:14:23,446 [wrapper] Pilot exit status: 0
[2025-07-27 03:14:23] 2025-07-27 07:14:23,460 [wrapper] pandaids: 6745919182
[2025-07-27 03:14:23] 2025-07-27 07:14:23,500 [wrapper] cleanup supervisor_pilot 10949 15210
[2025-07-27 03:14:23] 2025-07-27 07:14:23,504 [wrapper] Test setup, not cleaning
[2025-07-27 03:14:23] 2025-07-27 07:14:23,508 [wrapper] apfmon messages muted
[2025-07-27 03:14:23] 2025-07-27 07:14:23,512 [wrapper] ==== wrapper stdout END ====
[2025-07-27 03:14:23] 2025-07-27 07:14:23,516 [wrapper] ==== wrapper stderr END ====
[2025-07-27 03:14:23]  *** Error codes and diagnostics ***
[2025-07-27 03:14:23]     "exeErrorCode": 0,
[2025-07-27 03:14:23]     "exeErrorDiag": "",
[2025-07-27 03:14:23]     "pilotErrorCode": 0,
[2025-07-27 03:14:23]     "pilotErrorDiag": "",
[2025-07-27 03:14:23]  *** Listing of results directory ***
[2025-07-27 03:14:23] total 397068
[2025-07-27 03:14:23] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 19:58 pilot3.tar.gz
[2025-07-27 03:14:23] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 20:23 queuedata.json
[2025-07-27 03:14:23] -rwx------ 1 boincer umatlas     36292 Jul 26 20:24 runpilot2-wrapper.sh
[2025-07-27 03:14:23] -rw-r--r-- 1 boincer umatlas       100 Jul 27 01:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 03:14:23] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 01:32 run_atlas
[2025-07-27 03:14:23] -rw-r--r-- 1 boincer umatlas       105 Jul 27 01:32 job.xml
[2025-07-27 03:14:23] -rw-r--r-- 2 boincer umatlas 233200515 Jul 27 01:32 EVNT.45758456._000002.pool.root.1
[2025-07-27 03:14:23] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 01:32 start_atlas.sh
[2025-07-27 03:14:23] drwxrwx--x 2 boincer umatlas      4096 Jul 27 01:32 shared
[2025-07-27 03:14:23] -rw-r--r-- 2 boincer umatlas    542881 Jul 27 01:32 input.tar.gz
[2025-07-27 03:14:23] -rw-r--r-- 1 boincer umatlas         0 Jul 27 01:32 boinc_lockfile
[2025-07-27 03:14:23] -rw-r--r-- 1 boincer umatlas      2562 Jul 27 01:32 pandaJob.out
[2025-07-27 03:14:23] -rw------- 1 boincer umatlas    980109 Jul 27 01:32 agis_schedconf.cvmfs.json
[2025-07-27 03:14:23] -rw------- 1 boincer umatlas   1593052 Jul 27 01:32 agis_ddmendpoints.agis.ALL.json
[2025-07-27 03:14:23] drwx------ 4 boincer umatlas      4096 Jul 27 01:32 pilot3
[2025-07-27 03:14:23] -rw-r--r-- 1 boincer umatlas      5868 Jul 27 03:09 init_data.xml
[2025-07-27 03:14:23] -rw------- 1 boincer umatlas 167613361 Jul 27 03:13 HITS.45758458._000046.pool.root.1
[2025-07-27 03:14:23] -rw------- 1 boincer umatlas      1048 Jul 27 03:13 memory_monitor_summary.json
[2025-07-27 03:14:23] -rw------- 1 boincer umatlas    388723 Jul 27 03:13 log.45758458._000046.job.log.tgz.1
[2025-07-27 03:14:23] -rw-r--r-- 1 boincer umatlas       529 Jul 27 03:13 boinc_task_state.xml
[2025-07-27 03:14:23] -rw------- 1 boincer umatlas      7845 Jul 27 03:13 heartbeat.json
[2025-07-27 03:14:23] -rw------- 1 boincer umatlas        95 Jul 27 03:13 pilot_heartbeat.json
[2025-07-27 03:14:23] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 03:14 boinc_mmap_file
[2025-07-27 03:14:23] -rw-r--r-- 1 boincer umatlas        27 Jul 27 03:14 wrapper_checkpoint.txt
[2025-07-27 03:14:23] -rw------- 1 boincer umatlas       745 Jul 27 03:14 pilotlog.txt
[2025-07-27 03:14:23] -rw------- 1 boincer umatlas    565827 Jul 27 03:14 log.45758458._000046.job.log.1
[2025-07-27 03:14:23] -rw------- 1 boincer umatlas       357 Jul 27 03:14 output.list
[2025-07-27 03:14:23] -rw-r--r-- 1 boincer umatlas       620 Jul 27 03:14 runtime_log
[2025-07-27 03:14:23] -rw------- 1 boincer umatlas    972800 Jul 27 03:14 result.tar.gz
[2025-07-27 03:14:23] -rw-r--r-- 1 boincer umatlas      8662 Jul 27 03:14 runtime_log.err
[2025-07-27 03:14:23] -rw------- 1 boincer umatlas       660 Jul 27 03:14 hkNODmsM4z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwcTLDmQLotMo.diag
[2025-07-27 03:14:23] -rw-r--r-- 1 boincer umatlas     21577 Jul 27 03:14 stderr.txt
[2025-07-27 03:14:23] HITS file was successfully produced:
[2025-07-27 03:14:23] -rw------- 1 boincer umatlas 167613361 Jul 27 03:13 shared/HITS.pool.root.1
[2025-07-27 03:14:23]  *** Contents of shared directory: ***
[2025-07-27 03:14:23] total 392928
[2025-07-27 03:14:23] -rw-r--r-- 2 boincer umatlas 233200515 Jul 27 01:32 ATLAS.root_0
[2025-07-27 03:14:23] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 01:32 start_atlas.sh
[2025-07-27 03:14:23] -rw-r--r-- 2 boincer umatlas    542881 Jul 27 01:32 input.tar.gz
[2025-07-27 03:14:23] -rw------- 1 boincer umatlas 167613361 Jul 27 03:13 HITS.pool.root.1
[2025-07-27 03:14:23] -rw------- 1 boincer umatlas    972800 Jul 27 03:14 result.tar.gz
03:14:24 (11602): run_atlas exited; CPU time 66932.014815
03:14:24 (11602): called boinc_finish(0)

</stderr_txt>
]]>

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