Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:56:47 (1408086): wrapper (7.7.26015): starting
02:56:47 (1408086): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 02:56:47] Arguments: --nthreads 12
[2025-07-27 02:56:47] Threads: 12
[2025-07-27 02:56:47] Checking for CVMFS
[2025-07-27 02:56:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 02:56:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 02:56:47] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 02:56:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 02:56:47] 2.13.0.0 1190652 18033 328024 148803 2 105 30720044 32935937 7064 16776704 0 32918875 99.725 57186723 29264 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 02:56:47] CVMFS is ok
[2025-07-27 02:56:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 02:56:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 02:56:47] Further information can be found at the LHC@home message board.
[2025-07-27 02:56:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 02:56:47] Checking for apptainer binary...
[2025-07-27 02:56:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 02:56:47] Running /usr/bin/apptainer --version
[2025-07-27 02:56:48] apptainer version 1.4.1-1.el9
[2025-07-27 02:56:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 02:56:48] c6-1-26-3.aglt2.org
[2025-07-27 02:56:48] apptainer works
[2025-07-27 02:56:48] Set ATHENA_PROC_NUMBER=12
[2025-07-27 02:56:48] Set ATHENA_CORE_NUMBER=12
[2025-07-27 02:56:48] Starting ATLAS job with PandaID=6745918446
[2025-07-27 02:56:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 04:16:57]  *** The last 200 lines of the pilot log: ***
[2025-07-27 04:16:57]  protocol_id=None
[2025-07-27 04:16:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 04:16:57]  replicas=None
[2025-07-27 04:16:57]  scope=mc23_13p6TeV
[2025-07-27 04:16:57]  status=None
[2025-07-27 04:16:57]  status_code=0
[2025-07-27 04:16:57]  storage_token=
[2025-07-27 04:16:57]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745918446/log.45758877._000039.job.log.tgz.1
[2025-07-27 04:16:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b2/45/log.45758877._000039.job.log.tgz.1
[2025-07-27 04:16:57]  workdir=None
[2025-07-27 04:16:57] ]
[2025-07-27 04:16:57] 2025-07-27 08:16:18,064 | INFO     | transferring file log.45758877._000039.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745918446/log.45758877._000039.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 04:16:57] 2025-07-27 08:16:18,064 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745918446/log.45758877._000039.job.log.tgz.1 /tmp/boinchome/slots/0/log.45758877._000039.job
[2025-07-27 04:16:57] 2025-07-27 08:16:18,085 | INFO     | adding to output.list: log.45758877._000039.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b2/45/log.45758877._000039.job.log.tg
[2025-07-27 04:16:57] 2025-07-27 08:16:18,086 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 04:16:57] 2025-07-27 08:16:18,086 | INFO     | summary of transferred files:
[2025-07-27 04:16:57] 2025-07-27 08:16:18,086 | INFO     |  -- lfn=log.45758877._000039.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 04:16:57] 2025-07-27 08:16:18,086 | INFO     | stage-out finished correctly
[2025-07-27 04:16:57] 2025-07-27 08:16:20,181 | INFO     | monitor loop #354: job 0:6745918446 is in state 'finished'
[2025-07-27 04:16:57] 2025-07-27 08:16:20,181 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 04:16:57] 2025-07-27 08:16:20,977 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 04:16:57] 2025-07-27 08:16:21,074 | INFO     | job 6745918446 has state=finished
[2025-07-27 04:16:57] 2025-07-27 08:16:21,074 | INFO     | preparing for final server update for job 6745918446 in state='finished'
[2025-07-27 04:16:57] 2025-07-27 08:16:21,075 | INFO     | this job has now completed (state=finished)
[2025-07-27 04:16:57] 2025-07-27 08:16:21,075 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 04:16:57] 2025-07-27 08:16:21,075 | INFO     | log transfer has been attempted: DONE
[2025-07-27 04:16:57] 2025-07-27 08:16:21,075 | INFO     | job 6745918446 has finished - writing final server update
[2025-07-27 04:16:57] 2025-07-27 08:16:21,075 | INFO     | total number of processed events: 400 (read)
[2025-07-27 04:16:57] 2025-07-27 08:16:21,076 | INFO     | executing command: lscpu
[2025-07-27 04:16:57] 2025-07-27 08:16:21,133 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 04:16:57] 2025-07-27 08:16:22,684 | INFO     | monitor loop #355: job 0:6745918446 is in state 'finished'
[2025-07-27 04:16:57] 2025-07-27 08:16:22,684 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 04:16:57] 2025-07-27 08:16:25,187 | INFO     | monitor loop #356: job 0:6745918446 is in state 'finished'
[2025-07-27 04:16:57] 2025-07-27 08:16:25,187 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 04:16:57] 2025-07-27 08:16:25,606 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 04:16:57] 2025-07-27 08:16:25,610 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2704.630571428571
[2025-07-27 04:16:57] 2025-07-27 08:16:25,618 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745918446/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 04:16:57] 2025-07-27 08:16:25,618 | INFO     | extracted standard info from prmon json
[2025-07-27 04:16:57] 2025-07-27 08:16:25,619 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 04:16:57] 2025-07-27 08:16:25,619 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 04:16:57] 2025-07-27 08:16:25,619 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 04:16:57] 2025-07-27 08:16:25,619 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 04:16:57] 2025-07-27 08:16:25,621 | INFO     | fitting pss+swap vs Time
[2025-07-27 04:16:57] 2025-07-27 08:16:25,621 | INFO     | sum of square deviations: 110960220.0
[2025-07-27 04:16:57] 2025-07-27 08:16:25,621 | INFO     | sum of deviations: -6736542990.999999
[2025-07-27 04:16:57] 2025-07-27 08:16:25,621 | INFO     | mean x: 1753601892.0
[2025-07-27 04:16:57] 2025-07-27 08:16:25,621 | INFO     | mean y: 2474737.4788732394
[2025-07-27 04:16:57] 2025-07-27 08:16:25,621 | INFO     | -- intersect: 106465985124.86758
[2025-07-27 04:16:57] 2025-07-27 08:16:25,622 | INFO     | intersect: 106465985124.86758
[2025-07-27 04:16:57] 2025-07-27 08:16:25,622 | INFO     | chi2: 0.13586187879465642
[2025-07-27 04:16:57] 2025-07-27 08:16:25,622 | INFO     | -- intersect: 106465985124.86758
[2025-07-27 04:16:57] 2025-07-27 08:16:25,622 | INFO     | current memory leak: -60.71 B/s (using 71 data points, chi2=0.14)
[2025-07-27 04:16:57] 2025-07-27 08:16:25,622 | INFO     | could have reported an average CPU frequency of 2716 MHz (6 samples)
[2025-07-27 04:16:57] 2025-07-27 08:16:25,622 | INFO     | ..............................
[2025-07-27 04:16:57] 2025-07-27 08:16:25,622 | INFO     | . Timing measurements:
[2025-07-27 04:16:57] 2025-07-27 08:16:25,622 | INFO     | . get job = 0 s
[2025-07-27 04:16:57] 2025-07-27 08:16:25,622 | INFO     | . initial setup = 3 s
[2025-07-27 04:16:57] 2025-07-27 08:16:25,623 | INFO     | . payload setup = 8 s
[2025-07-27 04:16:57] 2025-07-27 08:16:25,623 | INFO     | . stage-in = 0 s
[2025-07-27 04:16:57] 2025-07-27 08:16:25,623 | INFO     | . payload execution = 4726 s
[2025-07-27 04:16:57] 2025-07-27 08:16:25,623 | INFO     | . stage-out = 0 s
[2025-07-27 04:16:57] 2025-07-27 08:16:25,623 | INFO     | . log creation = 0 s
[2025-07-27 04:16:57] 2025-07-27 08:16:25,623 | INFO     | ..............................
[2025-07-27 04:16:57] 2025-07-27 08:16:25,723 | INFO     | 
[2025-07-27 04:16:57] 2025-07-27 08:16:25,723 | INFO     | job summary report
[2025-07-27 04:16:57] 2025-07-27 08:16:25,723 | INFO     | --------------------------------------------------
[2025-07-27 04:16:57] 2025-07-27 08:16:25,723 | INFO     | PanDA job id: 6745918446
[2025-07-27 04:16:57] 2025-07-27 08:16:25,724 | INFO     | task id: 45758877
[2025-07-27 04:16:57] 2025-07-27 08:16:25,724 | INFO     | errors: (none)
[2025-07-27 04:16:57] 2025-07-27 08:16:25,724 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 04:16:57] 2025-07-27 08:16:25,724 | INFO     | pilot state: finished 
[2025-07-27 04:16:57] 2025-07-27 08:16:25,724 | INFO     | transexitcode: 0
[2025-07-27 04:16:57] 2025-07-27 08:16:25,724 | INFO     | exeerrorcode: 0
[2025-07-27 04:16:57] 2025-07-27 08:16:25,724 | INFO     | exeerrordiag: 
[2025-07-27 04:16:57] 2025-07-27 08:16:25,724 | INFO     | exitcode: 0
[2025-07-27 04:16:57] 2025-07-27 08:16:25,724 | INFO     | exitmsg: OK
[2025-07-27 04:16:57] 2025-07-27 08:16:25,724 | INFO     | cpuconsumptiontime: 51735 s
[2025-07-27 04:16:57] 2025-07-27 08:16:25,724 | INFO     | nevents: 400
[2025-07-27 04:16:57] 2025-07-27 08:16:25,724 | INFO     | neventsw: 0
[2025-07-27 04:16:57] 2025-07-27 08:16:25,724 | INFO     | pid: 1418735
[2025-07-27 04:16:57] 2025-07-27 08:16:25,724 | INFO     | pgrp: 1418735
[2025-07-27 04:16:57] 2025-07-27 08:16:25,724 | INFO     | corecount: 12
[2025-07-27 04:16:57] 2025-07-27 08:16:25,725 | INFO     | event service: False
[2025-07-27 04:16:57] 2025-07-27 08:16:25,725 | INFO     | sizes: {0: 2397262, 1: 2397461, 6: 2397723, 12: 2397751, 4738: 2423907, 4739: 2432905, 4742: 2433089, 4747: 2433283}
[2025-07-27 04:16:57] 2025-07-27 08:16:25,725 | INFO     | --------------------------------------------------
[2025-07-27 04:16:57] 2025-07-27 08:16:25,725 | INFO     | 
[2025-07-27 04:16:57] 2025-07-27 08:16:25,725 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 04:16:57] 2025-07-27 08:16:25,745 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 04:16:57] 2025-07-27 08:16:25,745 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 04:16:57] 2025-07-27 08:16:25,746 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 04:16:57] 2025-07-27 08:16:25,746 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 04:16:57] 2025-07-27 08:16:25,746 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 04:16:57] 2025-07-27 08:16:25,746 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 04:16:57] 2025-07-27 08:16:25,746 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 04:16:57] 2025-07-27 08:16:25,746 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 04:16:57] 2025-07-27 08:16:25,746 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 04:16:57] 2025-07-27 08:16:25,746 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 04:16:57] 2025-07-27 08:16:25,746 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 04:16:57] 2025-07-27 08:16:25,746 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 04:16:57] 2025-07-27 08:16:25,746 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 04:16:57] 2025-07-27 08:16:25,746 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 04:16:57] 2025-07-27 08:16:25,746 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 04:16:57] 2025-07-27 08:16:25,746 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 04:16:57] 2025-07-27 08:16:25,746 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 04:16:57] 2025-07-27 08:16:25,746 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 04:16:57] 2025-07-27 08:16:25,746 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 04:16:57] 2025-07-27 08:16:25,746 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 04:16:57] 2025-07-27 08:16:25,747 | INFO     | job 6745918446 has completed (purged errors)
[2025-07-27 04:16:57] 2025-07-27 08:16:25,747 | INFO     | overall cleanup function is called
[2025-07-27 04:16:57] 2025-07-27 08:16:26,755 | INFO     | --- collectZombieJob: --- 10, [1418735]
[2025-07-27 04:16:57] 2025-07-27 08:16:26,755 | INFO     | zombie collector waiting for pid 1418735
[2025-07-27 04:16:57] 2025-07-27 08:16:26,755 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 04:16:57] 2025-07-27 08:16:26,755 | INFO     | collected zombie processes
[2025-07-27 04:16:57] 2025-07-27 08:16:26,755 | INFO     | will attempt to kill all subprocesses of pid=1418735
[2025-07-27 04:16:57] 2025-07-27 08:16:26,985 | INFO     | process IDs to be killed: [1418735] (in reverse order)
[2025-07-27 04:16:57] 2025-07-27 08:16:27,083 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 04:16:57] 2025-07-27 08:16:27,083 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 04:16:57] 2025-07-27 08:16:27,095 | INFO     | did not find any defunct processes belonging to 1418735
[2025-07-27 04:16:57] 2025-07-27 08:16:27,106 | INFO     | did not find any defunct processes belonging to 1418735
[2025-07-27 04:16:57] 2025-07-27 08:16:27,106 | INFO     | ready for new job
[2025-07-27 04:16:57] 2025-07-27 08:16:27,107 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 04:16:57] 2025-07-27 08:16:27,110 | INFO     | ***************************************
[2025-07-27 04:16:57] 2025-07-27 08:16:27,110 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 04:16:57] 2025-07-27 08:16:27,110 | INFO     | ***************************************
[2025-07-27 04:16:57] 2025-07-27 08:16:27,110 | INFO     | 
[2025-07-27 04:16:57] 2025-07-27 08:16:27,125 | INFO     | architecture information:
[2025-07-27 04:16:57] 2025-07-27 08:16:27,126 | INFO     | executing command: cat /etc/os-release
[2025-07-27 04:16:57] 2025-07-27 08:16:27,140 | INFO     | cat /etc/os-release:
[2025-07-27 04:16:57] NAME="CentOS Linux"
[2025-07-27 04:16:57] VERSION="7 (Core)"
[2025-07-27 04:16:57] ID="centos"
[2025-07-27 04:16:57] ID_LIKE="rhel fedora"
[2025-07-27 04:16:57] VERSION_ID="7"
[2025-07-27 04:16:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 04:16:57] ANSI_COLOR="0;31"
[2025-07-27 04:16:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 04:16:57] HOME_URL="https://www.centos.org/"
[2025-07-27 04:16:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 04:16:57] 
[2025-07-27 04:16:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 04:16:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 04:16:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 04:16:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 04:16:57] 
[2025-07-27 04:16:57] 2025-07-27 08:16:27,140 | INFO     | ***************************************
[2025-07-27 04:16:57] 2025-07-27 08:16:27,643 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 04:16:57] 2025-07-27 08:16:27,660 | INFO     | sufficient remaining disk space (76284952576 B)
[2025-07-27 04:16:57] 2025-07-27 08:16:27,660 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 04:16:57] 2025-07-27 08:16:27,660 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 04:16:57] 2025-07-27 08:16:27,660 | INFO     | update_server=False
[2025-07-27 04:16:57] 2025-07-27 08:16:27,660 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 04:16:57] 2025-07-27 08:16:27,661 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 04:16:57] 2025-07-27 08:16:27,661 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 04:16:57] 2025-07-27 08:16:27,691 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 04:16:57] 2025-07-27 08:16:27,691 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 04:16:57] 2025-07-27 08:16:27,691 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 04:16:57] 2025-07-27 08:16:27,692 | INFO     | will abort loop
[2025-07-27 04:16:57] 2025-07-27 08:16:28,044 | INFO     | all job control threads have been joined
[2025-07-27 04:16:57] 2025-07-27 08:16:28,556 | INFO     | all data control threads have been joined
[2025-07-27 04:16:57] 2025-07-27 08:16:28,665 | INFO     | [job] retrieve thread has finished
[2025-07-27 04:16:57] 2025-07-27 08:16:28,666 | INFO     | [job] queue monitor thread has finished
[2025-07-27 04:16:57] 2025-07-27 08:16:28,682 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 04:16:57] 2025-07-27 08:16:28,697 | INFO     | [job] job monitor thread has finished
[2025-07-27 04:16:57] 2025-07-27 08:16:28,832 | INFO     | [data] copytool_in thread has finished
[2025-07-27 04:16:57] 2025-07-27 08:16:29,049 | INFO     | [job] control thread has finished
[2025-07-27 04:16:57] 2025-07-27 08:16:29,073 | INFO     | [payload] validate_post thread has finished
[2025-07-27 04:16:57] 2025-07-27 08:16:29,147 | INFO     | all payload control threads have been joined
[2025-07-27 04:16:57] 2025-07-27 08:16:29,337 | INFO     | [job] validate thread has finished
[2025-07-27 04:16:57] 2025-07-27 08:16:29,431 | INFO     | [payload] failed_post thread has finished
[2025-07-27 04:16:57] 2025-07-27 08:16:29,561 | INFO     | [data] control thread has finished
[2025-07-27 04:16:57] 2025-07-27 08:16:29,570 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 04:16:57] 2025-07-27 08:16:29,759 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 04:16:57] 2025-07-27 08:16:29,789 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 04:16:57] 2025-07-27 08:16:30,152 | INFO     | [payload] control thread has finished
[2025-07-27 04:16:57] 2025-07-27 08:16:30,687 | INFO     | [data] copytool_out thread has finished
[2025-07-27 04:16:57] 2025-07-27 08:16:31,667 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 04:16:57] 2025-07-27 08:16:38,354 | INFO     | job.realtimelogging is not enabled
[2025-07-27 04:16:57] 2025-07-27 08:16:39,359 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 04:16:57] 2025-07-27 08:16:40,905 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140052970813248)>', '<ExcThread(monitor, started 140052483000064)>']
[2025-07-27 04:16:57] 2025-07-27 08:16:45,930 | INFO     | all workflow threads have been joined
[2025-07-27 04:16:57] 2025-07-27 08:16:45,930 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 04:16:57] 2025-07-27 08:16:45,930 | INFO     | traces error code: 0
[2025-07-27 04:16:57] 2025-07-27 08:16:45,931 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 04:16:57] 2025-07-27 08:16:57,529 | INFO     | PID=1411997 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 04:16:57] 2025-07-27 08:16:57,530 | INFO     | .. there are 11 such processes running
[2025-07-27 04:16:57] 2025-07-27 08:16:57,531 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 04:16:57] 2025-07-27 08:16:57,531 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 04:16:57] 2025-07-27 08:16:57,531 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 04:16:57] 2025-07-27 08:16:57,531 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 04:16:57] 2025-07-27 08:16:57,531 | INFO     | [monitor] control thread has ended
[2025-07-27 04:16:57] 2025-07-27 08:16:57,734 [wrapper] ==== pilot stdout END ====
[2025-07-27 04:16:57] 2025-07-27 08:16:57,737 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 04:16:57] 2025-07-27 08:16:57,741 [wrapper] pilotpid: 1411997
[2025-07-27 04:16:57] 2025-07-27 08:16:57,744 [wrapper] Pilot exit status: 0
[2025-07-27 04:16:57] 2025-07-27 08:16:57,754 [wrapper] pandaids: 6745918446
[2025-07-27 04:16:57] 2025-07-27 08:16:57,821 [wrapper] cleanup supervisor_pilot 1667564 1411998
[2025-07-27 04:16:57] 2025-07-27 08:16:57,824 [wrapper] Test setup, not cleaning
[2025-07-27 04:16:57] 2025-07-27 08:16:57,827 [wrapper] apfmon messages muted
[2025-07-27 04:16:57] 2025-07-27 08:16:57,829 [wrapper] ==== wrapper stdout END ====
[2025-07-27 04:16:57] 2025-07-27 08:16:57,832 [wrapper] ==== wrapper stderr END ====
[2025-07-27 04:16:57]  *** Error codes and diagnostics ***
[2025-07-27 04:16:57]     "exeErrorCode": 0,
[2025-07-27 04:16:57]     "exeErrorDiag": "",
[2025-07-27 04:16:57]     "pilotErrorCode": 0,
[2025-07-27 04:16:57]     "pilotErrorDiag": "",
[2025-07-27 04:16:57]  *** Listing of results directory ***
[2025-07-27 04:16:57] total 408640
[2025-07-27 04:16:57] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 19:58 pilot3.tar.gz
[2025-07-27 04:16:57] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 20:17 queuedata.json
[2025-07-27 04:16:57] -rwx------. 1 boincer umatlas     36292 Jul 26 20:18 runpilot2-wrapper.sh
[2025-07-27 04:16:57] -rw-r--r--. 1 boincer umatlas       100 Jul 27 02:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 04:16:57] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 02:56 run_atlas
[2025-07-27 04:16:57] -rw-r--r--. 1 boincer umatlas       105 Jul 27 02:56 job.xml
[2025-07-27 04:16:57] -rw-r--r--. 2 boincer umatlas 240406587 Jul 27 02:56 EVNT.45758875._000002.pool.root.1
[2025-07-27 04:16:57] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 02:56 start_atlas.sh
[2025-07-27 04:16:57] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 02:56 shared
[2025-07-27 04:16:57] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 02:56 input.tar.gz
[2025-07-27 04:16:57] -rw-r--r--. 1 boincer umatlas         0 Jul 27 02:56 boinc_lockfile
[2025-07-27 04:16:57] -rw-r--r--. 1 boincer umatlas      2576 Jul 27 02:56 pandaJob.out
[2025-07-27 04:16:57] -rw-------. 1 boincer umatlas    980125 Jul 27 02:56 agis_schedconf.cvmfs.json
[2025-07-27 04:16:57] -rw-------. 1 boincer umatlas   1593052 Jul 27 02:57 agis_ddmendpoints.agis.ALL.json
[2025-07-27 04:16:57] drwx------. 4 boincer umatlas      4096 Jul 27 02:57 pilot3
[2025-07-27 04:16:57] -rw-r--r--. 1 boincer umatlas      6842 Jul 27 04:13 init_data.xml
[2025-07-27 04:16:57] -rw-------. 1 boincer umatlas 172476311 Jul 27 04:15 HITS.45758877._000039.pool.root.1
[2025-07-27 04:16:57] -rw-r--r--. 1 boincer umatlas       529 Jul 27 04:15 boinc_task_state.xml
[2025-07-27 04:16:57] -rw-------. 1 boincer umatlas      1036 Jul 27 04:16 memory_monitor_summary.json
[2025-07-27 04:16:57] -rw-------. 1 boincer umatlas    368283 Jul 27 04:16 log.45758877._000039.job.log.tgz.1
[2025-07-27 04:16:57] -rw-------. 1 boincer umatlas      7813 Jul 27 04:16 heartbeat.json
[2025-07-27 04:16:57] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 04:16 boinc_mmap_file
[2025-07-27 04:16:57] -rw-r--r--. 1 boincer umatlas        27 Jul 27 04:16 wrapper_checkpoint.txt
[2025-07-27 04:16:57] -rw-------. 1 boincer umatlas        95 Jul 27 04:16 pilot_heartbeat.json
[2025-07-27 04:16:57] -rw-------. 1 boincer umatlas       823 Jul 27 04:16 pilotlog.txt
[2025-07-27 04:16:57] -rw-------. 1 boincer umatlas    476255 Jul 27 04:16 log.45758877._000039.job.log.1
[2025-07-27 04:16:57] -rw-------. 1 boincer umatlas       357 Jul 27 04:16 output.list
[2025-07-27 04:16:57] -rw-r--r--. 1 boincer umatlas       620 Jul 27 04:16 runtime_log
[2025-07-27 04:16:57] -rw-------. 1 boincer umatlas    860160 Jul 27 04:16 result.tar.gz
[2025-07-27 04:16:57] -rw-r--r--. 1 boincer umatlas      8667 Jul 27 04:16 runtime_log.err
[2025-07-27 04:16:57] -rw-------. 1 boincer umatlas       655 Jul 27 04:16 LZJMDm7G4z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5bTLDm0oF4ln.diag
[2025-07-27 04:16:57] -rw-r--r--. 1 boincer umatlas     21817 Jul 27 04:16 stderr.txt
[2025-07-27 04:16:57] HITS file was successfully produced:
[2025-07-27 04:16:57] -rw-------. 1 boincer umatlas 172476311 Jul 27 04:15 shared/HITS.pool.root.1
[2025-07-27 04:16:57]  *** Contents of shared directory: ***
[2025-07-27 04:16:57] total 404608
[2025-07-27 04:16:57] -rw-r--r--. 2 boincer umatlas 240406587 Jul 27 02:56 ATLAS.root_0
[2025-07-27 04:16:57] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 02:56 start_atlas.sh
[2025-07-27 04:16:57] -rw-r--r--. 2 boincer umatlas    542896 Jul 27 02:56 input.tar.gz
[2025-07-27 04:16:57] -rw-------. 1 boincer umatlas 172476311 Jul 27 04:15 HITS.pool.root.1
[2025-07-27 04:16:57] -rw-------. 1 boincer umatlas    860160 Jul 27 04:16 result.tar.gz
04:16:59 (1408086): run_atlas exited; CPU time 51843.646172
04:16:59 (1408086): called boinc_finish(0)

</stderr_txt>
]]>

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