Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:20:05 (2148808): wrapper (7.7.26015): starting
01:20:05 (2148808): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 01:20:05] Arguments: --nthreads 8
[2025-07-27 01:20:05] Threads: 8
[2025-07-27 01:20:05] Checking for CVMFS
[2025-07-27 01:20:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 01:20:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 01:20:06] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 01:20:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 01:20:06] 2.13.1.0 5036 13555 262792 148801 1 65 35607977 40960000 10409 16776704 0 68473284 99.758 68320006 33632 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 01:20:06] CVMFS is ok
[2025-07-27 01:20:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 01:20:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 01:20:06] Further information can be found at the LHC@home message board.
[2025-07-27 01:20:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 01:20:06] Checking for apptainer binary...
[2025-07-27 01:20:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 01:20:06] Running /usr/bin/apptainer --version
[2025-07-27 01:20:06] apptainer version 1.4.1-1.el9
[2025-07-27 01:20:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 01:20:06] c-212-2.aglt2.org
[2025-07-27 01:20:06] apptainer works
[2025-07-27 01:20:06] Set ATHENA_PROC_NUMBER=8
[2025-07-27 01:20:06] Set ATHENA_CORE_NUMBER=8
[2025-07-27 01:20:06] Starting ATLAS job with PandaID=6745907824
[2025-07-27 01:20:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 02:58:52]  *** The last 200 lines of the pilot log: ***
[2025-07-27 02:58:52]  mtime=0
[2025-07-27 02:58:52]  protocol_id=None
[2025-07-27 02:58:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 02:58:52]  replicas=None
[2025-07-27 02:58:52]  scope=mc23_13p6TeV
[2025-07-27 02:58:52]  status=None
[2025-07-27 02:58:52]  status_code=0
[2025-07-27 02:58:52]  storage_token=
[2025-07-27 02:58:52]  surl=/tmp/boinchome/slots/11/PanDA_Pilot-6745907824/log.45758450._000085.job.log.tgz.1
[2025-07-27 02:58:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/ef/log.45758450._000085.job.log.tgz.1
[2025-07-27 02:58:52]  workdir=None
[2025-07-27 02:58:52] ]
[2025-07-27 02:58:52] 2025-07-27 06:58:13,539 | INFO     | transferring file log.45758450._000085.job.log.tgz.1 from /tmp/boinchome/slots/11/PanDA_Pilot-6745907824/log.45758450._000085.job.log.tgz.1 to /tmp/boinchome/slots
[2025-07-27 02:58:52] 2025-07-27 06:58:13,539 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/11/PanDA_Pilot-6745907824/log.45758450._000085.job.log.tgz.1 /tmp/boinchome/slots/11/log.45758450._000085.j
[2025-07-27 02:58:52] 2025-07-27 06:58:13,559 | INFO     | adding to output.list: log.45758450._000085.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/ef/log.45758450._000085.job.log.tg
[2025-07-27 02:58:52] 2025-07-27 06:58:13,560 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 02:58:52] 2025-07-27 06:58:13,561 | INFO     | summary of transferred files:
[2025-07-27 02:58:52] 2025-07-27 06:58:13,562 | INFO     |  -- lfn=log.45758450._000085.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 02:58:52] 2025-07-27 06:58:13,562 | INFO     | stage-out finished correctly
[2025-07-27 02:58:52] 2025-07-27 06:58:13,945 | INFO     | monitor loop #429: job 0:6745907824 is in state 'finished'
[2025-07-27 02:58:52] 2025-07-27 06:58:13,946 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 02:58:52] 2025-07-27 06:58:14,871 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 02:58:52] 2025-07-27 06:58:15,996 | INFO     | job 6745907824 has state=finished
[2025-07-27 02:58:52] 2025-07-27 06:58:15,997 | INFO     | preparing for final server update for job 6745907824 in state='finished'
[2025-07-27 02:58:52] 2025-07-27 06:58:15,997 | INFO     | this job has now completed (state=finished)
[2025-07-27 02:58:52] 2025-07-27 06:58:15,997 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 02:58:52] 2025-07-27 06:58:15,997 | INFO     | log transfer has been attempted: DONE
[2025-07-27 02:58:52] 2025-07-27 06:58:15,997 | INFO     | job 6745907824 has finished - writing final server update
[2025-07-27 02:58:52] 2025-07-27 06:58:15,998 | INFO     | total number of processed events: 400 (read)
[2025-07-27 02:58:52] 2025-07-27 06:58:15,999 | INFO     | executing command: lscpu
[2025-07-27 02:58:52] 2025-07-27 06:58:16,059 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 02:58:52] 2025-07-27 06:58:16,453 | INFO     | monitor loop #430: job 0:6745907824 is in state 'finished'
[2025-07-27 02:58:52] 2025-07-27 06:58:16,453 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 02:58:52] 2025-07-27 06:58:17,593 | INFO     | PID=2152396 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 02:58:52] 2025-07-27 06:58:17,593 | INFO     | .. there are 14 such processes running
[2025-07-27 02:58:52] 2025-07-27 06:58:18,956 | INFO     | monitor loop #431: job 0:6745907824 is in state 'finished'
[2025-07-27 02:58:52] 2025-07-27 06:58:18,957 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 02:58:52] 2025-07-27 06:58:19,813 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 02:58:52] 2025-07-27 06:58:19,819 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3307.657916666665
[2025-07-27 02:58:52] 2025-07-27 06:58:19,833 | INFO     | using path: /tmp/boinchome/slots/11/PanDA_Pilot-6745907824/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 02:58:52] 2025-07-27 06:58:19,834 | INFO     | extracted standard info from prmon json
[2025-07-27 02:58:52] 2025-07-27 06:58:19,834 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 02:58:52] 2025-07-27 06:58:19,834 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 02:58:52] 2025-07-27 06:58:19,834 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 02:58:52] 2025-07-27 06:58:19,835 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 02:58:52] 2025-07-27 06:58:19,836 | INFO     | fitting pss+swap vs Time
[2025-07-27 02:58:52] 2025-07-27 06:58:19,837 | INFO     | sum of square deviations: 218571540.0
[2025-07-27 02:58:52] 2025-07-27 06:58:19,837 | INFO     | sum of deviations: -6414065149.000003
[2025-07-27 02:58:52] 2025-07-27 06:58:19,837 | INFO     | mean x: 1753596647.0
[2025-07-27 02:58:52] 2025-07-27 06:58:19,837 | INFO     | mean y: 2566098.595505618
[2025-07-27 02:58:52] 2025-07-27 06:58:19,837 | INFO     | -- intersect: 51462528081.4134
[2025-07-27 02:58:52] 2025-07-27 06:58:19,837 | INFO     | intersect: 51462528081.4134
[2025-07-27 02:58:52] 2025-07-27 06:58:19,837 | INFO     | chi2: 0.013841376131031468
[2025-07-27 02:58:52] 2025-07-27 06:58:19,838 | INFO     | -- intersect: 51462528081.4134
[2025-07-27 02:58:52] 2025-07-27 06:58:19,838 | INFO     | current memory leak: -29.35 B/s (using 89 data points, chi2=0.01)
[2025-07-27 02:58:52] 2025-07-27 06:58:19,838 | INFO     | could have reported an average CPU frequency of 3270 MHz (7 samples)
[2025-07-27 02:58:52] 2025-07-27 06:58:19,838 | INFO     | ..............................
[2025-07-27 02:58:52] 2025-07-27 06:58:19,838 | INFO     | . Timing measurements:
[2025-07-27 02:58:52] 2025-07-27 06:58:19,838 | INFO     | . get job = 0 s
[2025-07-27 02:58:52] 2025-07-27 06:58:19,838 | INFO     | . initial setup = 2 s
[2025-07-27 02:58:52] 2025-07-27 06:58:19,838 | INFO     | . payload setup = 11 s
[2025-07-27 02:58:52] 2025-07-27 06:58:19,838 | INFO     | . stage-in = 0 s
[2025-07-27 02:58:52] 2025-07-27 06:58:19,839 | INFO     | . payload execution = 5838 s
[2025-07-27 02:58:52] 2025-07-27 06:58:19,839 | INFO     | . stage-out = 0 s
[2025-07-27 02:58:52] 2025-07-27 06:58:19,839 | INFO     | . log creation = 0 s
[2025-07-27 02:58:52] 2025-07-27 06:58:19,839 | INFO     | ..............................
[2025-07-27 02:58:52] 2025-07-27 06:58:19,919 | INFO     | 
[2025-07-27 02:58:52] 2025-07-27 06:58:19,920 | INFO     | job summary report
[2025-07-27 02:58:52] 2025-07-27 06:58:19,920 | INFO     | --------------------------------------------------
[2025-07-27 02:58:52] 2025-07-27 06:58:19,920 | INFO     | PanDA job id: 6745907824
[2025-07-27 02:58:52] 2025-07-27 06:58:19,920 | INFO     | task id: 45758450
[2025-07-27 02:58:52] 2025-07-27 06:58:19,920 | INFO     | errors: (none)
[2025-07-27 02:58:52] 2025-07-27 06:58:19,920 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 02:58:52] 2025-07-27 06:58:19,920 | INFO     | pilot state: finished 
[2025-07-27 02:58:52] 2025-07-27 06:58:19,920 | INFO     | transexitcode: 0
[2025-07-27 02:58:52] 2025-07-27 06:58:19,920 | INFO     | exeerrorcode: 0
[2025-07-27 02:58:52] 2025-07-27 06:58:19,920 | INFO     | exeerrordiag: 
[2025-07-27 02:58:52] 2025-07-27 06:58:19,920 | INFO     | exitcode: 0
[2025-07-27 02:58:52] 2025-07-27 06:58:19,920 | INFO     | exitmsg: OK
[2025-07-27 02:58:52] 2025-07-27 06:58:19,920 | INFO     | cpuconsumptiontime: 43097 s
[2025-07-27 02:58:52] 2025-07-27 06:58:19,920 | INFO     | nevents: 400
[2025-07-27 02:58:52] 2025-07-27 06:58:19,921 | INFO     | neventsw: 0
[2025-07-27 02:58:52] 2025-07-27 06:58:19,921 | INFO     | pid: 2159040
[2025-07-27 02:58:52] 2025-07-27 06:58:19,921 | INFO     | pgrp: 2159040
[2025-07-27 02:58:52] 2025-07-27 06:58:19,921 | INFO     | corecount: 8
[2025-07-27 02:58:52] 2025-07-27 06:58:19,921 | INFO     | event service: False
[2025-07-27 02:58:52] 2025-07-27 06:58:19,921 | INFO     | sizes: {0: 2397289, 1: 2397488, 8: 2397750, 11: 2397778, 5853: 2424340, 5855: 2433340, 5856: 2433524, 5861: 2433718}
[2025-07-27 02:58:52] 2025-07-27 06:58:19,921 | INFO     | --------------------------------------------------
[2025-07-27 02:58:52] 2025-07-27 06:58:19,921 | INFO     | 
[2025-07-27 02:58:52] 2025-07-27 06:58:19,921 | INFO     | executing command: ls -lF /tmp/boinchome/slots/11
[2025-07-27 02:58:52] 2025-07-27 06:58:19,940 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 02:58:52] 2025-07-27 06:58:19,940 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 02:58:52] 2025-07-27 06:58:19,940 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 02:58:52] 2025-07-27 06:58:19,940 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 02:58:52] 2025-07-27 06:58:19,940 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 02:58:52] 2025-07-27 06:58:19,940 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 02:58:52] 2025-07-27 06:58:19,941 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 02:58:52] 2025-07-27 06:58:19,941 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 02:58:52] 2025-07-27 06:58:19,941 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 02:58:52] 2025-07-27 06:58:19,941 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 02:58:52] 2025-07-27 06:58:19,941 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 02:58:52] 2025-07-27 06:58:19,941 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 02:58:52] 2025-07-27 06:58:19,941 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 02:58:52] 2025-07-27 06:58:19,941 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 02:58:52] 2025-07-27 06:58:19,941 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 02:58:52] 2025-07-27 06:58:19,941 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 02:58:52] 2025-07-27 06:58:19,941 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 02:58:52] 2025-07-27 06:58:19,941 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 02:58:52] 2025-07-27 06:58:19,942 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 02:58:52] 2025-07-27 06:58:19,942 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 02:58:52] 2025-07-27 06:58:19,942 | INFO     | job 6745907824 has completed (purged errors)
[2025-07-27 02:58:52] 2025-07-27 06:58:19,942 | INFO     | overall cleanup function is called
[2025-07-27 02:58:52] 2025-07-27 06:58:20,951 | INFO     | --- collectZombieJob: --- 10, [2159040]
[2025-07-27 02:58:52] 2025-07-27 06:58:20,951 | INFO     | zombie collector waiting for pid 2159040
[2025-07-27 02:58:52] 2025-07-27 06:58:20,951 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 02:58:52] 2025-07-27 06:58:20,951 | INFO     | collected zombie processes
[2025-07-27 02:58:52] 2025-07-27 06:58:20,951 | INFO     | will attempt to kill all subprocesses of pid=2159040
[2025-07-27 02:58:52] 2025-07-27 06:58:21,310 | INFO     | process IDs to be killed: [2159040] (in reverse order)
[2025-07-27 02:58:52] 2025-07-27 06:58:21,421 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 02:58:52] 2025-07-27 06:58:21,421 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 02:58:52] 2025-07-27 06:58:21,434 | INFO     | did not find any defunct processes belonging to 2159040
[2025-07-27 02:58:52] 2025-07-27 06:58:21,444 | INFO     | did not find any defunct processes belonging to 2159040
[2025-07-27 02:58:52] 2025-07-27 06:58:21,445 | INFO     | ready for new job
[2025-07-27 02:58:52] 2025-07-27 06:58:21,445 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 02:58:52] 2025-07-27 06:58:21,446 | INFO     | ***************************************
[2025-07-27 02:58:52] 2025-07-27 06:58:21,446 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 02:58:52] 2025-07-27 06:58:21,447 | INFO     | ***************************************
[2025-07-27 02:58:52] 2025-07-27 06:58:21,447 | INFO     | 
[2025-07-27 02:58:52] 2025-07-27 06:58:21,451 | INFO     | architecture information:
[2025-07-27 02:58:52] 2025-07-27 06:58:21,452 | INFO     | executing command: cat /etc/os-release
[2025-07-27 02:58:52] 2025-07-27 06:58:21,468 | INFO     | cat /etc/os-release:
[2025-07-27 02:58:52] NAME="CentOS Linux"
[2025-07-27 02:58:52] VERSION="7 (Core)"
[2025-07-27 02:58:52] ID="centos"
[2025-07-27 02:58:52] ID_LIKE="rhel fedora"
[2025-07-27 02:58:52] VERSION_ID="7"
[2025-07-27 02:58:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 02:58:52] ANSI_COLOR="0;31"
[2025-07-27 02:58:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 02:58:52] HOME_URL="https://www.centos.org/"
[2025-07-27 02:58:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 02:58:52] 
[2025-07-27 02:58:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 02:58:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 02:58:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 02:58:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 02:58:52] 
[2025-07-27 02:58:52] 2025-07-27 06:58:21,468 | INFO     | ***************************************
[2025-07-27 02:58:52] 2025-07-27 06:58:21,971 | INFO     | executing command: df -mP /tmp/boinchome/slots/11
[2025-07-27 02:58:52] 2025-07-27 06:58:21,988 | INFO     | sufficient remaining disk space (123401666560 B)
[2025-07-27 02:58:52] 2025-07-27 06:58:21,988 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 02:58:52] 2025-07-27 06:58:21,988 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 02:58:52] 2025-07-27 06:58:21,988 | INFO     | update_server=False
[2025-07-27 02:58:52] 2025-07-27 06:58:21,988 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 02:58:52] 2025-07-27 06:58:21,988 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 02:58:52] 2025-07-27 06:58:22,466 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 02:58:52] 2025-07-27 06:58:22,467 | INFO     | aborting loop
[2025-07-27 02:58:52] 2025-07-27 06:58:22,494 | INFO     | all data control threads have been joined
[2025-07-27 02:58:52] 2025-07-27 06:58:22,988 | INFO     | all payload control threads have been joined
[2025-07-27 02:58:52] 2025-07-27 06:58:22,994 | INFO     | [job] retrieve thread has finished
[2025-07-27 02:58:52] 2025-07-27 06:58:23,472 | INFO     | [job] job monitor thread has finished
[2025-07-27 02:58:52] 2025-07-27 06:58:23,475 | INFO     | [data] copytool_in thread has finished
[2025-07-27 02:58:52] 2025-07-27 06:58:23,499 | INFO     | [data] control thread has finished
[2025-07-27 02:58:52] 2025-07-27 06:58:23,505 | INFO     | [job] validate thread has finished
[2025-07-27 02:58:52] 2025-07-27 06:58:23,518 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 02:58:52] 2025-07-27 06:58:23,613 | INFO     | [payload] failed_post thread has finished
[2025-07-27 02:58:52] 2025-07-27 06:58:23,683 | INFO     | all job control threads have been joined
[2025-07-27 02:58:52] 2025-07-27 06:58:23,856 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 02:58:52] 2025-07-27 06:58:23,939 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 02:58:52] 2025-07-27 06:58:23,989 | INFO     | [payload] control thread has finished
[2025-07-27 02:58:52] 2025-07-27 06:58:23,994 | INFO     | [data] copytool_out thread has finished
[2025-07-27 02:58:52] 2025-07-27 06:58:24,247 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 02:58:52] 2025-07-27 06:58:24,317 | INFO     | [payload] validate_post thread has finished
[2025-07-27 02:58:52] 2025-07-27 06:58:24,689 | INFO     | [job] control thread has finished
[2025-07-27 02:58:52] 2025-07-27 06:58:24,930 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 02:58:52] 2025-07-27 06:58:25,470 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 02:58:52] 2025-07-27 06:58:25,936 | INFO     | [job] queue monitor thread has finished
[2025-07-27 02:58:52] 2025-07-27 06:58:29,475 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 02:58:52] 2025-07-27 06:58:31,009 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139675609241408)>', '<ExcThread(monitor, started 139675104679680)>']
[2025-07-27 02:58:52] 2025-07-27 06:58:36,012 | INFO     | all workflow threads have been joined
[2025-07-27 02:58:52] 2025-07-27 06:58:36,012 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 02:58:52] 2025-07-27 06:58:36,012 | INFO     | traces error code: 0
[2025-07-27 02:58:52] 2025-07-27 06:58:36,013 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 02:58:52] 2025-07-27 06:58:52,053 | INFO     | PID=2152396 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 02:58:52] 2025-07-27 06:58:52,054 | INFO     | .. there are 13 such processes running
[2025-07-27 02:58:52] 2025-07-27 06:58:52,054 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 02:58:52] 2025-07-27 06:58:52,054 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 02:58:52] 2025-07-27 06:58:52,054 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 02:58:52] 2025-07-27 06:58:52,054 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 02:58:52] 2025-07-27 06:58:52,054 | INFO     | [monitor] control thread has ended
[2025-07-27 02:58:52] 2025-07-27 06:58:52,154 [wrapper] ==== pilot stdout END ====
[2025-07-27 02:58:52] 2025-07-27 06:58:52,157 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 02:58:52] 2025-07-27 06:58:52,160 [wrapper] pilotpid: 2152396
[2025-07-27 02:58:52] 2025-07-27 06:58:52,162 [wrapper] Pilot exit status: 0
[2025-07-27 02:58:52] 2025-07-27 06:58:52,171 [wrapper] pandaids: 6745907824
[2025-07-27 02:58:52] 2025-07-27 06:58:52,242 [wrapper] cleanup supervisor_pilot 2490356 2152397
[2025-07-27 02:58:52] 2025-07-27 06:58:52,244 [wrapper] Test setup, not cleaning
[2025-07-27 02:58:52] 2025-07-27 06:58:52,246 [wrapper] apfmon messages muted
[2025-07-27 02:58:52] 2025-07-27 06:58:52,248 [wrapper] ==== wrapper stdout END ====
[2025-07-27 02:58:52] 2025-07-27 06:58:52,250 [wrapper] ==== wrapper stderr END ====
[2025-07-27 02:58:52]  *** Error codes and diagnostics ***
[2025-07-27 02:58:52]     "exeErrorCode": 0,
[2025-07-27 02:58:52]     "exeErrorDiag": "",
[2025-07-27 02:58:52]     "pilotErrorCode": 0,
[2025-07-27 02:58:52]     "pilotErrorDiag": "",
[2025-07-27 02:58:52]  *** Listing of results directory ***
[2025-07-27 02:58:52] total 400760
[2025-07-27 02:58:52] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 19:58 pilot3.tar.gz
[2025-07-27 02:58:52] -rwx------. 1 boincer umatlas     36292 Jul 26 20:08 runpilot2-wrapper.sh
[2025-07-27 02:58:52] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 20:08 queuedata.json
[2025-07-27 02:58:52] -rw-r--r--. 1 boincer umatlas       100 Jul 27 01:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 02:58:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 01:20 run_atlas
[2025-07-27 02:58:52] -rw-r--r--. 1 boincer umatlas       105 Jul 27 01:20 job.xml
[2025-07-27 02:58:52] -rw-r--r--. 2 boincer umatlas 234085622 Jul 27 01:20 EVNT.45758448._000004.pool.root.1
[2025-07-27 02:58:52] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 01:20 start_atlas.sh
[2025-07-27 02:58:52] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 01:20 shared
[2025-07-27 02:58:52] -rw-r--r--. 2 boincer umatlas    542872 Jul 27 01:20 input.tar.gz
[2025-07-27 02:58:52] -rw-r--r--. 1 boincer umatlas         0 Jul 27 01:20 boinc_lockfile
[2025-07-27 02:58:52] -rw-r--r--. 1 boincer umatlas      2552 Jul 27 01:20 pandaJob.out
[2025-07-27 02:58:52] -rw-------. 1 boincer umatlas    980109 Jul 27 01:20 agis_schedconf.cvmfs.json
[2025-07-27 02:58:52] -rw-------. 1 boincer umatlas   1593052 Jul 27 01:20 agis_ddmendpoints.agis.ALL.json
[2025-07-27 02:58:52] drwx------. 4 boincer umatlas      4096 Jul 27 01:20 pilot3
[2025-07-27 02:58:52] -rw-r--r--. 1 boincer umatlas      6946 Jul 27 02:54 init_data.xml
[2025-07-27 02:58:52] -rw-r--r--. 1 boincer umatlas       529 Jul 27 02:57 boinc_task_state.xml
[2025-07-27 02:58:52] -rw-------. 1 boincer umatlas 170656932 Jul 27 02:57 HITS.45758450._000085.pool.root.1
[2025-07-27 02:58:52] -rw-------. 1 boincer umatlas      1026 Jul 27 02:58 memory_monitor_summary.json
[2025-07-27 02:58:52] -rw-------. 1 boincer umatlas    315220 Jul 27 02:58 log.45758450._000085.job.log.tgz.1
[2025-07-27 02:58:52] -rw-------. 1 boincer umatlas      7756 Jul 27 02:58 heartbeat.json
[2025-07-27 02:58:52] -rw-r--r--. 1 boincer umatlas        27 Jul 27 02:58 wrapper_checkpoint.txt
[2025-07-27 02:58:52] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 02:58 boinc_mmap_file
[2025-07-27 02:58:52] -rw-------. 1 boincer umatlas       823 Jul 27 02:58 pilotlog.txt
[2025-07-27 02:58:52] -rw-------. 1 boincer umatlas        95 Jul 27 02:58 pilot_heartbeat.json
[2025-07-27 02:58:52] -rw-------. 1 boincer umatlas    562956 Jul 27 02:58 log.45758450._000085.job.log.1
[2025-07-27 02:58:52] -rw-------. 1 boincer umatlas       357 Jul 27 02:58 output.list
[2025-07-27 02:58:52] -rw-r--r--. 1 boincer umatlas       620 Jul 27 02:58 runtime_log
[2025-07-27 02:58:52] -rw-------. 1 boincer umatlas    901120 Jul 27 02:58 result.tar.gz
[2025-07-27 02:58:52] -rw-------. 1 boincer umatlas       651 Jul 27 02:58 rzjLDmv73z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmCf1KDmgeyZDo.diag
[2025-07-27 02:58:52] -rw-r--r--. 1 boincer umatlas      8669 Jul 27 02:58 runtime_log.err
[2025-07-27 02:58:52] -rw-r--r--. 1 boincer umatlas     21835 Jul 27 02:58 stderr.txt
[2025-07-27 02:58:52] HITS file was successfully produced:
[2025-07-27 02:58:52] -rw-------. 1 boincer umatlas 170656932 Jul 27 02:57 shared/HITS.pool.root.1
[2025-07-27 02:58:52]  *** Contents of shared directory: ***
[2025-07-27 02:58:52] total 396696
[2025-07-27 02:58:52] -rw-r--r--. 2 boincer umatlas 234085622 Jul 27 01:20 ATLAS.root_0
[2025-07-27 02:58:52] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 01:20 start_atlas.sh
[2025-07-27 02:58:52] -rw-r--r--. 2 boincer umatlas    542872 Jul 27 01:20 input.tar.gz
[2025-07-27 02:58:52] -rw-------. 1 boincer umatlas 170656932 Jul 27 02:57 HITS.pool.root.1
[2025-07-27 02:58:52] -rw-------. 1 boincer umatlas    901120 Jul 27 02:58 result.tar.gz
02:58:54 (2148808): run_atlas exited; CPU time 43259.991514
02:58:54 (2148808): called boinc_finish(0)

</stderr_txt>
]]>

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