Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-27 01:09:26 (8508): Detected: vboxwrapper 26206
2025-07-27 01:09:26 (8508): Detected: BOINC client v8.0.2
2025-07-27 01:09:26 (8508): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-07-27 01:09:27 (8508): Successfully copied 'init_data.xml' to the shared directory.
2025-07-27 01:09:27 (8508): Create VM. (boinc_9999c192cf5cd6b2, slot#1)
2025-07-27 01:09:28 (8508): Setting Memory Size for VM. (4400MB)
2025-07-27 01:09:28 (8508): Setting CPU Count for VM. (4)
2025-07-27 01:09:28 (8508): Setting Chipset Options for VM.
2025-07-27 01:09:29 (8508): Setting Graphics Controller Options for VM.
2025-07-27 01:09:29 (8508): Setting Boot Options for VM.
2025-07-27 01:09:29 (8508): Setting Network Configuration for NAT.
2025-07-27 01:09:29 (8508): Enabling VM Network Access.
2025-07-27 01:09:30 (8508): Disabling USB Support for VM.
2025-07-27 01:09:30 (8508): Disabling COM Port Support for VM.
2025-07-27 01:09:30 (8508): Disabling LPT Port Support for VM.
2025-07-27 01:09:30 (8508): Disabling Audio Support for VM.
2025-07-27 01:09:31 (8508): Disabling Clipboard Support for VM.
2025-07-27 01:09:31 (8508): Disabling Drag and Drop Support for VM.
2025-07-27 01:09:31 (8508): Adding storage controller(s) to VM.
2025-07-27 01:09:32 (8508): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-27 01:09:34 (8508): Adding VirtualBox Guest Additions to VM.
2025-07-27 01:09:35 (8508): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-27 01:09:35 (8508): forwarding host port 58244 to guest port 80
2025-07-27 01:09:35 (8508): Enabling remote desktop for VM.
2025-07-27 01:09:35 (8508): Required extension pack not installed, remote desktop not enabled.
2025-07-27 01:09:35 (8508): Enabling shared directory for VM.
2025-07-27 01:09:36 (8508): Starting VM using VBoxManage interface. (boinc_9999c192cf5cd6b2, slot#1)
2025-07-27 01:09:45 (8508): Successfully started VM. (PID = '7992')
2025-07-27 01:09:45 (8508): Reporting VM Process ID to BOINC.
2025-07-27 01:09:45 (8508): Guest Log: BIOS: VirtualBox 7.0.6
2025-07-27 01:09:45 (8508): Guest Log: CPUID EDX: 0x178bfbff
2025-07-27 01:09:45 (8508): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-27 01:09:45 (8508): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-27 01:09:45 (8508): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-27 01:09:45 (8508): Detected: Web Application Enabled (http://localhost:58244)
2025-07-27 01:09:45 (8508): Preference change detected
2025-07-27 01:09:45 (8508): Setting CPU throttle for VM. (80%)
2025-07-27 01:09:45 (8508): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-27 01:09:47 (8508): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-27 01:09:47 (8508): Guest Log: BIOS: Booting from Hard Disk...
2025-07-27 01:09:50 (8508): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-27 01:09:50 (8508): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-27 01:09:50 (8508): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-27 01:10:00 (8508): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-27 01:10:00 (8508): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-27 01:10:07 (8508): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-27 01:10:07 (8508): Guest Log: 00:00:00.000407 main     Log opened 2025-07-27T01:10:06.278256000Z
2025-07-27 01:10:07 (8508): Guest Log: 00:00:00.000598 main     OS Product: Linux
2025-07-27 01:10:07 (8508): Guest Log: 00:00:00.000662 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-27 01:10:07 (8508): Guest Log: 00:00:00.000713 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-27 01:10:07 (8508): Guest Log: 00:00:00.000750 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-27 01:10:07 (8508): Guest Log: 00:00:00.000751 main     Process ID: 1268
2025-07-27 01:10:07 (8508): Guest Log: 00:00:00.000752 main     Package type: LINUX_64BITS_GENERIC
2025-07-27 01:10:07 (8508): Guest Log: 00:00:00.001905 main     5.2.32 r132073 started. Verbose level = 0
2025-07-27 01:10:08 (8508): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-27 01:10:08 (8508): Guest Log: [INFO] Mounting shared directory
2025-07-27 01:10:08 (8508): Guest Log: [INFO] Checking for init_data.xml
2025-07-27 01:10:11 (8508): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-27 01:10:11 (8508): Guest Log: [INFO] Detected branch: prod
2025-07-27 01:10:11 (8508): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-27 01:10:11 (8508): Guest Log: Copying input files
2025-07-27 01:10:12 (8508): VM state change detected. (old = 'running', new = 'paused')
2025-07-27 01:10:32 (8508): VM state change detected. (old = 'paused', new = 'running')
2025-07-27 01:10:33 (8508): Guest Log: Copied input files into RunAtlas.
2025-07-27 01:10:33 (8508): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-27 01:10:33 (8508): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-27 01:10:33 (8508): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-27 01:10:33 (8508): Guest Log: Further information can be found at the LHC@home message board.
2025-07-27 01:10:37 (8508): Guest Log: 00:00:10.006285 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 410 885 611 000ns (GuestNow=1 753 593 017 168 340 000 ns GuestLast=1 753 578 606 282 729 000 ns fSetTimeLastLoop=true )
2025-07-27 01:10:41 (8508): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-27 01:10:41 (8508): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-27 01:10:41 (8508): Guest Log: 2.6.3.0 1546 0 32120 148800 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-07-27 01:10:42 (8508): VM state change detected. (old = 'running', new = 'paused')
2025-07-27 01:11:02 (8508): VM state change detected. (old = 'paused', new = 'running')
2025-07-27 01:11:03 (8508): Guest Log: copied the webapp to /var/www
2025-07-27 01:11:03 (8508): Guest Log: ATHENA_PROC_NUMBER=4
2025-07-27 01:11:03 (8508): Guest Log: ATHENA_CORE_NUMBER=4
2025-07-27 01:11:03 (8508): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-27 01:11:03 (8508): Guest Log:  *** Starting ATLAS job. (PandaID=6745902037 taskID=45759252) ***
2025-07-27 01:11:52 (8508): VM state change detected. (old = 'running', new = 'paused')
2025-07-27 01:12:12 (8508): VM state change detected. (old = 'paused', new = 'running')
2025-07-27 01:12:33 (8508): VM state change detected. (old = 'running', new = 'paused')
2025-07-27 01:12:53 (8508): VM state change detected. (old = 'paused', new = 'running')
2025-07-27 01:13:23 (8508): VM state change detected. (old = 'running', new = 'paused')
2025-07-27 01:13:43 (8508): VM state change detected. (old = 'paused', new = 'running')
2025-07-27 01:13:53 (8508): VM state change detected. (old = 'running', new = 'paused')
2025-07-27 01:14:13 (8508): VM state change detected. (old = 'paused', new = 'running')
2025-07-27 01:14:33 (8508): VM state change detected. (old = 'running', new = 'paused')
2025-07-27 01:14:53 (8508): VM state change detected. (old = 'paused', new = 'running')
2025-07-27 01:15:13 (8508): VM state change detected. (old = 'running', new = 'paused')
2025-07-27 01:15:33 (8508): VM state change detected. (old = 'paused', new = 'running')
2025-07-27 01:15:43 (8508): VM state change detected. (old = 'running', new = 'paused')
2025-07-27 01:16:03 (8508): VM state change detected. (old = 'paused', new = 'running')
2025-07-27 01:16:23 (8508): VM state change detected. (old = 'running', new = 'paused')
2025-07-27 01:16:43 (8508): VM state change detected. (old = 'paused', new = 'running')
2025-07-27 01:17:23 (8508): VM state change detected. (old = 'running', new = 'paused')
2025-07-27 01:17:43 (8508): VM state change detected. (old = 'paused', new = 'running')
2025-07-27 01:21:27 (8508): Guest Log:  *** Job finished ***
2025-07-27 01:21:27 (8508): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-27 01:21:27 (8508): Guest Log: 2025-07-27 05:17:39,733 | INFO     | [data] copytool_out thread has finished
2025-07-27 01:21:27 (8508): Guest Log: 2025-07-27 05:17:39,734 | INFO     | [job] control thread has finished
2025-07-27 01:21:27 (8508): Guest Log: 2025-07-27 05:17:41,612 | INFO     | [data] queue_monitor thread has finished
2025-07-27 01:21:27 (8508): Guest Log: 2025-07-27 05:17:42,060 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140369482196800)>', '<ExcThread(monitor, started 140368876115712)>']
2025-07-27 01:21:27 (8508): Guest Log: 2025-07-27 05:17:42,606 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-27 01:21:27 (8508): Guest Log: 2025-07-27 05:17:42,606 | INFO     | [monitor] control thread has ended
2025-07-27 01:21:27 (8508): Guest Log: 2025-07-27 05:17:47,065 | INFO     | all workflow threads have been joined
2025-07-27 01:21:27 (8508): Guest Log: 2025-07-27 05:17:47,066 | INFO     | end of generic workflow (traces error code: 0)
2025-07-27 01:21:27 (8508): Guest Log: 2025-07-27 05:17:47,066 | INFO     | traces error code: 0
2025-07-27 01:21:27 (8508): Guest Log: 2025-07-27 05:17:47,066 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-27 01:21:27 (8508): Guest Log: 2025-07-27 05:17:47,211 [wrapper] ==== pilot stdout END ====
2025-07-27 01:21:27 (8508): Guest Log: 2025-07-27 05:17:47,219 [wrapper] ==== wrapper stdout RESUME ====
2025-07-27 01:21:27 (8508): Guest Log: 2025-07-27 05:17:47,226 [wrapper] pilotpid: 5850
2025-07-27 01:21:27 (8508): Guest Log: 2025-07-27 05:17:47,234 [wrapper] Pilot exit status: 0
2025-07-27 01:21:27 (8508): Guest Log: 2025-07-27 05:17:47,380 [wrapper] pandaids: 6745902037
2025-07-27 01:21:27 (8508): Guest Log: 2025-07-27 05:17:47,421 [wrapper] cleanup supervisor_pilot  5856 5851
2025-07-27 01:21:27 (8508): Guest Log: 2025-07-27 05:17:47,429 [wrapper] Test setup, not cleaning
2025-07-27 01:21:27 (8508): Guest Log: 2025-07-27 05:17:47,437 [wrapper] apfmon messages muted
2025-07-27 01:21:27 (8508): Guest Log: 2025-07-27 05:17:47,444 [wrapper] ==== wrapper stdout END ====
2025-07-27 01:21:27 (8508): Guest Log: 2025-07-27 05:17:47,452 [wrapper] ==== wrapper stderr END ====
2025-07-27 01:21:27 (8508): Guest Log:  *** Error codes and diagnostics ***
2025-07-27 01:21:27 (8508): Guest Log:     "exeErrorCode": 65,
2025-07-27 01:21:27 (8508): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-07-27 01:21:27 (8508): Guest Log:     "pilotErrorCode": 1305,
2025-07-27 01:21:27 (8508): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-07-27 01:21:27 (8508): Guest Log:  *** Listing of results directory ***
2025-07-27 01:21:27 (8508): Guest Log: total 4044
2025-07-27 01:21:27 (8508): Guest Log: -rw-r--r--. 1 atlas atlas  530466 Jul 26 23:40 pilot3.tar.gz
2025-07-27 01:21:27 (8508): Guest Log: -rwx------. 1 atlas atlas   36292 Jul 26 23:53 runpilot2-wrapper.sh
2025-07-27 01:21:27 (8508): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Jul 26 23:53 queuedata.json
2025-07-27 01:21:27 (8508): Guest Log: -rwxr-xr-x. 1 atlas atlas    8821 Jul 27 05:10 init_data.xml
2025-07-27 01:21:27 (8508): Guest Log: -rwxr-xr-x. 1 atlas atlas  542887 Jul 27 05:10 input.tar.gz
2025-07-27 01:21:27 (8508): Guest Log: -rwxr-xr-x. 1 atlas atlas   15095 Jul 27 05:10 start_atlas.sh
2025-07-27 01:21:27 (8508): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Jul 27 05:10 EVNT.45759247._000002.pool.root.1 -> /data/./ATLAS.root_0
2025-07-27 01:21:27 (8508): Guest Log: -rw-r--r--. 1 atlas atlas    2566 Jul 27 05:10 pandaJob.out
2025-07-27 01:21:27 (8508): Guest Log: -rw-------. 1 atlas atlas  980125 Jul 27 05:10 agis_schedconf.cvmfs.json
2025-07-27 01:21:27 (8508): Guest Log: -rw-------. 1 atlas atlas 1593052 Jul 27 05:11 agis_ddmendpoints.agis.ALL.json
2025-07-27 01:21:27 (8508): Guest Log: drwx------. 4 atlas atlas    4096 Jul 27 05:11 pilot3
2025-07-27 01:21:27 (8508): Guest Log: -rw-------. 1 atlas atlas   46053 Jul 27 05:15 log.45759252._000028.job.log.tgz.1
2025-07-27 01:21:27 (8508): Guest Log: -rw-------. 1 atlas atlas      95 Jul 27 05:17 pilot_heartbeat.json
2025-07-27 01:21:27 (8508): Guest Log: -rw-------. 1 atlas atlas    8047 Jul 27 05:17 heartbeat.json
2025-07-27 01:21:27 (8508): Guest Log: -rw-------. 1 atlas atlas    4540 Jul 27 05:17 pilotlog.txt
2025-07-27 01:21:27 (8508): Guest Log: -rw-------. 1 atlas atlas  123512 Jul 27 05:17 log.45759252._000028.job.log.1
2025-07-27 01:21:27 (8508): Guest Log: -rw-------. 1 atlas atlas     188 Jul 27 05:17 output.list
2025-07-27 01:21:27 (8508): Guest Log: -rw-r--r--. 1 atlas atlas     620 Jul 27 05:17 runtime_log
2025-07-27 01:21:27 (8508): Guest Log: -rw-------. 1 atlas atlas  184320 Jul 27 05:17 result.tar.gz
2025-07-27 01:21:27 (8508): Guest Log: -rw-r--r--. 1 atlas atlas    8467 Jul 27 05:17 runtime_log.err
2025-07-27 01:21:27 (8508): Guest Log: -rw-------. 1 atlas atlas     651 Jul 27 05:17 2cPMDmns3z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrWTLDmG90hqn.diag
2025-07-27 01:21:27 (8508): Guest Log: Looking for outputfile HITS.45759252._000028.pool.root.1
2025-07-27 01:21:27 (8508): Guest Log: No HITS file was produced
2025-07-27 01:21:27 (8508): Guest Log: Successfully finished the ATLAS job!
2025-07-27 01:21:27 (8508): Guest Log: Copying the results back to the shared directory!
2025-07-27 01:21:28 (8508): Guest Log:  *** Contents of shared directory: ***
2025-07-27 01:21:28 (8508): Guest Log: total 199076
2025-07-27 01:21:28 (8508): Guest Log: -rwxrwxrwx. 1 root root 203092191 Jul 27 05:09 ATLAS.root_0
2025-07-27 01:21:28 (8508): Guest Log: -rwxrwxrwx. 1 root root      8821 Jul 27 05:09 init_data.xml
2025-07-27 01:21:28 (8508): Guest Log: -rwxrwxrwx. 1 root root    542887 Jul 27 05:08 input.tar.gz
2025-07-27 01:21:28 (8508): Guest Log: -rwxrwxrwx. 1 root root    184320 Jul 27  2025 result.tar.gz
2025-07-27 01:21:28 (8508): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 27 05:08 start_atlas.sh
2025-07-27 01:21:28 (8508): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-27 01:21:28 (8508): VM Completion File Detected.
2025-07-27 01:21:28 (8508): Powering off VM.
2025-07-27 01:21:29 (8508): Successfully stopped VM.
2025-07-27 01:21:29 (8508): Deregistering VM. (boinc_9999c192cf5cd6b2, slot#1)
2025-07-27 01:21:29 (8508): Removing network bandwidth throttle group from VM.
2025-07-27 01:21:30 (8508): Removing VM from VirtualBox.
01:21:35 (8508): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN