Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:01:25 (2848568): wrapper (7.7.26015): starting
07:01:25 (2848568): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 07:01:25] Arguments: --nthreads 12
[2025-07-27 07:01:25] Threads: 12
[2025-07-27 07:01:25] Checking for CVMFS
[2025-07-27 07:01:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 07:01:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 07:01:25] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 07:01:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 07:01:25] 2.12.6.0 240040 18277 312388 148809 0 94 31835883 32935936 13409 16776704 1 58581740 99.766 55984083 10667 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 07:01:25] CVMFS is ok
[2025-07-27 07:01:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 07:01:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 07:01:25] Further information can be found at the LHC@home message board.
[2025-07-27 07:01:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 07:01:25] Checking for apptainer binary...
[2025-07-27 07:01:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 07:01:25] Running /usr/bin/apptainer --version
[2025-07-27 07:01:25] apptainer version 1.4.1-1.el9
[2025-07-27 07:01:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 07:01:26] c6-1-24-2.aglt2.org
[2025-07-27 07:01:26] apptainer works
[2025-07-27 07:01:26] Set ATHENA_PROC_NUMBER=12
[2025-07-27 07:01:26] Set ATHENA_CORE_NUMBER=12
[2025-07-27 07:01:26] Starting ATLAS job with PandaID=6745902185
[2025-07-27 07:01:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 10:52:46]  *** The last 200 lines of the pilot log: ***
[2025-07-27 10:52:46] 2025-07-27 14:52:31,387 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 10:52:46] 2025-07-27 14:52:31,391 | INFO     | fitting pss+swap vs Time
[2025-07-27 10:52:46] 2025-07-27 14:52:31,391 | INFO     | sum of square deviations: 3626916218.096939
[2025-07-27 10:52:46] 2025-07-27 14:52:31,406 | INFO     | sum of deviations: 32318275920.458225
[2025-07-27 10:52:46] 2025-07-27 14:52:31,406 | INFO     | mean x: 1753621023.6431718
[2025-07-27 10:52:46] 2025-07-27 14:52:31,406 | INFO     | mean y: 2360083.585903084
[2025-07-27 10:52:46] 2025-07-27 14:52:31,406 | INFO     | -- intersect: -15623588985.552937
[2025-07-27 10:52:46] 2025-07-27 14:52:31,407 | INFO     | intersect: -15623588985.552937
[2025-07-27 10:52:46] 2025-07-27 14:52:31,407 | INFO     | chi2: 2.2369412888128535
[2025-07-27 10:52:46] 2025-07-27 14:52:31,407 | INFO     | sum of square deviations: 3392528443.481978
[2025-07-27 10:52:46] 2025-07-27 14:52:31,409 | INFO     | sum of deviations: 46391247909.432465
[2025-07-27 10:52:46] 2025-07-27 14:52:31,409 | INFO     | mean x: 1753620871.1576576
[2025-07-27 10:52:46] 2025-07-27 14:52:31,409 | INFO     | mean y: 2369073.2162162163
[2025-07-27 10:52:46] 2025-07-27 14:52:31,409 | INFO     | -- intersect: -23977580374.026196
[2025-07-27 10:52:46] 2025-07-27 14:52:31,409 | INFO     | intersect: -23977580374.026196
[2025-07-27 10:52:46] 2025-07-27 14:52:31,416 | INFO     | chi2: 1.5344345883116817
[2025-07-27 10:52:46] 2025-07-27 14:52:31,416 | INFO     | current chi2=1.5344345883116817 (change=31.404789388727885 %)
[2025-07-27 10:52:46] 2025-07-27 14:52:31,416 | INFO     | sum of square deviations: 3168466443.7695813
[2025-07-27 10:52:46] 2025-07-27 14:52:31,418 | INFO     | sum of deviations: 45472962560.01383
[2025-07-27 10:52:46] 2025-07-27 14:52:31,418 | INFO     | mean x: 1753620718.672811
[2025-07-27 10:52:46] 2025-07-27 14:52:31,418 | INFO     | mean y: 2368443.239631336
[2025-07-27 10:52:46] 2025-07-27 14:52:31,418 | INFO     | -- intersect: -25165115795.540062
[2025-07-27 10:52:46] 2025-07-27 14:52:31,418 | INFO     | intersect: -25165115795.540062
[2025-07-27 10:52:46] 2025-07-27 14:52:31,418 | INFO     | chi2: 1.5326512972443544
[2025-07-27 10:52:46] 2025-07-27 14:52:31,419 | INFO     | current chi2=1.5326512972443544 (change=0.11621812235667545 %)
[2025-07-27 10:52:46] 2025-07-27 14:52:31,419 | INFO     | right removable region: 216
[2025-07-27 10:52:46] 2025-07-27 14:52:31,419 | INFO     | sum of square deviations: 3392439383.481978
[2025-07-27 10:52:46] 2025-07-27 14:52:31,424 | INFO     | sum of deviations: -4147240172.9819775
[2025-07-27 10:52:46] 2025-07-27 14:52:31,425 | INFO     | mean x: 1753621176.1576576
[2025-07-27 10:52:46] 2025-07-27 14:52:31,425 | INFO     | mean y: 2383663.3423423423
[2025-07-27 10:52:46] 2025-07-27 14:52:31,425 | INFO     | -- intersect: 2146176777.336999
[2025-07-27 10:52:46] 2025-07-27 14:52:31,425 | INFO     | intersect: 2146176777.336999
[2025-07-27 10:52:46] 2025-07-27 14:52:31,425 | INFO     | chi2: 0.8162925878030043
[2025-07-27 10:52:46] 2025-07-27 14:52:31,426 | INFO     | current chi2=0.8162925878030043 (change=63.50853766769126 %)
[2025-07-27 10:52:46] 2025-07-27 14:52:31,426 | INFO     | sum of square deviations: 3168288323.7695813
[2025-07-27 10:52:46] 2025-07-27 14:52:31,427 | INFO     | sum of deviations: -8631213450.05069
[2025-07-27 10:52:46] 2025-07-27 14:52:31,432 | INFO     | mean x: 1753621328.672811
[2025-07-27 10:52:46] 2025-07-27 14:52:31,432 | INFO     | mean y: 2386656.7880184334
[2025-07-27 10:52:46] 2025-07-27 14:52:31,432 | INFO     | -- intersect: 4779691766.547754
[2025-07-27 10:52:46] 2025-07-27 14:52:31,432 | INFO     | intersect: 4779691766.547754
[2025-07-27 10:52:46] 2025-07-27 14:52:31,432 | INFO     | chi2: 0.7472429385871192
[2025-07-27 10:52:46] 2025-07-27 14:52:31,432 | INFO     | current chi2=0.7472429385871192 (change=8.458933750914913 %)
[2025-07-27 10:52:46] 2025-07-27 14:52:31,433 | INFO     | left removable region: 20
[2025-07-27 10:52:46] 2025-07-27 14:52:31,433 | INFO     | sum of square deviations: 2334595580.6683717
[2025-07-27 10:52:46] 2025-07-27 14:52:31,434 | INFO     | sum of deviations: 3372641240.40306
[2025-07-27 10:52:46] 2025-07-27 14:52:31,434 | INFO     | mean x: 1753621298.2295918
[2025-07-27 10:52:46] 2025-07-27 14:52:31,434 | INFO     | mean y: 2398307.413265306
[2025-07-27 10:52:46] 2025-07-27 14:52:31,434 | INFO     | -- intersect: -2530946465.202581
[2025-07-27 10:52:46] 2025-07-27 14:52:31,434 | INFO     | intersect: -2530946465.202581
[2025-07-27 10:52:46] 2025-07-27 14:52:31,435 | INFO     | chi2: 0.02829279340430479
[2025-07-27 10:52:46] 2025-07-27 14:52:31,435 | INFO     | -- intersect: -2530946465.202581
[2025-07-27 10:52:46] 2025-07-27 14:52:31,435 | INFO     | current memory leak: 1.44 B/s (using 196 data points, chi2=0.03)
[2025-07-27 10:52:46] 2025-07-27 14:52:31,440 | INFO     | could have reported an average CPU frequency of 2618 MHz (11 samples)
[2025-07-27 10:52:46] 2025-07-27 14:52:31,440 | INFO     | ..............................
[2025-07-27 10:52:46] 2025-07-27 14:52:31,440 | INFO     | . Timing measurements:
[2025-07-27 10:52:46] 2025-07-27 14:52:31,440 | INFO     | . get job = 0 s
[2025-07-27 10:52:46] 2025-07-27 14:52:31,440 | INFO     | . initial setup = 3 s
[2025-07-27 10:52:46] 2025-07-27 14:52:31,440 | INFO     | . payload setup = 8 s
[2025-07-27 10:52:46] 2025-07-27 14:52:31,441 | INFO     | . stage-in = 0 s
[2025-07-27 10:52:46] 2025-07-27 14:52:31,441 | INFO     | . payload execution = 13812 s
[2025-07-27 10:52:46] 2025-07-27 14:52:31,441 | INFO     | . stage-out = 2 s
[2025-07-27 10:52:46] 2025-07-27 14:52:31,441 | INFO     | . log creation = 0 s
[2025-07-27 10:52:46] 2025-07-27 14:52:31,441 | INFO     | ..............................
[2025-07-27 10:52:46] 2025-07-27 14:52:31,556 | INFO     | 
[2025-07-27 10:52:46] 2025-07-27 14:52:31,558 | INFO     | job summary report
[2025-07-27 10:52:46] 2025-07-27 14:52:31,558 | INFO     | --------------------------------------------------
[2025-07-27 10:52:46] 2025-07-27 14:52:31,558 | INFO     | PanDA job id: 6745902185
[2025-07-27 10:52:46] 2025-07-27 14:52:31,558 | INFO     | task id: 45758861
[2025-07-27 10:52:46] 2025-07-27 14:52:31,558 | INFO     | errors: (none)
[2025-07-27 10:52:46] 2025-07-27 14:52:31,558 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 10:52:46] 2025-07-27 14:52:31,558 | INFO     | pilot state: finished 
[2025-07-27 10:52:46] 2025-07-27 14:52:31,558 | INFO     | transexitcode: 0
[2025-07-27 10:52:46] 2025-07-27 14:52:31,558 | INFO     | exeerrorcode: 0
[2025-07-27 10:52:46] 2025-07-27 14:52:31,558 | INFO     | exeerrordiag: 
[2025-07-27 10:52:46] 2025-07-27 14:52:31,559 | INFO     | exitcode: 0
[2025-07-27 10:52:46] 2025-07-27 14:52:31,559 | INFO     | exitmsg: OK
[2025-07-27 10:52:46] 2025-07-27 14:52:31,559 | INFO     | cpuconsumptiontime: 57781 s
[2025-07-27 10:52:46] 2025-07-27 14:52:31,559 | INFO     | nevents: 400
[2025-07-27 10:52:46] 2025-07-27 14:52:31,559 | INFO     | neventsw: 0
[2025-07-27 10:52:46] 2025-07-27 14:52:31,559 | INFO     | pid: 2860998
[2025-07-27 10:52:46] 2025-07-27 14:52:31,559 | INFO     | pgrp: 2860998
[2025-07-27 10:52:46] 2025-07-27 14:52:31,559 | INFO     | corecount: 12
[2025-07-27 10:52:46] 2025-07-27 14:52:31,559 | INFO     | event service: False
[2025-07-27 10:52:46] 2025-07-27 14:52:31,559 | INFO     | sizes: {0: 2397475, 5: 2397737, 11: 2397793, 13824: 2428017, 13828: 2437015, 13830: 2437071, 13836: 2437393}
[2025-07-27 10:52:46] 2025-07-27 14:52:31,559 | INFO     | --------------------------------------------------
[2025-07-27 10:52:46] 2025-07-27 14:52:31,559 | INFO     | 
[2025-07-27 10:52:46] 2025-07-27 14:52:31,559 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 10:52:46] 2025-07-27 14:52:31,602 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 10:52:46] 2025-07-27 14:52:31,603 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 10:52:46] 2025-07-27 14:52:31,603 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 10:52:46] 2025-07-27 14:52:31,603 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 10:52:46] 2025-07-27 14:52:31,603 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 10:52:46] 2025-07-27 14:52:31,603 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 10:52:46] 2025-07-27 14:52:31,603 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 10:52:46] 2025-07-27 14:52:31,603 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 10:52:46] 2025-07-27 14:52:31,603 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 10:52:46] 2025-07-27 14:52:31,604 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 10:52:46] 2025-07-27 14:52:31,604 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 10:52:46] 2025-07-27 14:52:31,604 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 10:52:46] 2025-07-27 14:52:31,604 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 10:52:46] 2025-07-27 14:52:31,604 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 10:52:46] 2025-07-27 14:52:31,604 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 10:52:46] 2025-07-27 14:52:31,604 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 10:52:46] 2025-07-27 14:52:31,604 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 10:52:46] 2025-07-27 14:52:31,604 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 10:52:46] 2025-07-27 14:52:31,604 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 10:52:46] 2025-07-27 14:52:31,604 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 10:52:46] 2025-07-27 14:52:31,604 | INFO     | job 6745902185 has completed (purged errors)
[2025-07-27 10:52:46] 2025-07-27 14:52:31,605 | INFO     | overall cleanup function is called
[2025-07-27 10:52:46] 2025-07-27 14:52:32,617 | INFO     | --- collectZombieJob: --- 10, [2860998]
[2025-07-27 10:52:46] 2025-07-27 14:52:32,618 | INFO     | zombie collector waiting for pid 2860998
[2025-07-27 10:52:46] 2025-07-27 14:52:32,618 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 10:52:46] 2025-07-27 14:52:32,618 | INFO     | collected zombie processes
[2025-07-27 10:52:46] 2025-07-27 14:52:32,618 | INFO     | will attempt to kill all subprocesses of pid=2860998
[2025-07-27 10:52:46] 2025-07-27 14:52:33,515 | INFO     | PID=2853558 has CPU usage=12.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 10:52:46] 2025-07-27 14:52:33,516 | INFO     | .. there are 15 such processes running
[2025-07-27 10:52:46] 2025-07-27 14:52:33,576 | INFO     | process IDs to be killed: [2860998] (in reverse order)
[2025-07-27 10:52:46] 2025-07-27 14:52:33,721 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 10:52:46] 2025-07-27 14:52:33,721 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 10:52:46] 2025-07-27 14:52:33,739 | INFO     | did not find any defunct processes belonging to 2860998
[2025-07-27 10:52:46] 2025-07-27 14:52:33,771 | INFO     | did not find any defunct processes belonging to 2860998
[2025-07-27 10:52:46] 2025-07-27 14:52:33,775 | INFO     | ready for new job
[2025-07-27 10:52:46] 2025-07-27 14:52:33,776 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 10:52:46] 2025-07-27 14:52:33,780 | INFO     | ***************************************
[2025-07-27 10:52:46] 2025-07-27 14:52:33,780 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 10:52:46] 2025-07-27 14:52:33,781 | INFO     | ***************************************
[2025-07-27 10:52:46] 2025-07-27 14:52:33,781 | INFO     | 
[2025-07-27 10:52:46] 2025-07-27 14:52:33,804 | INFO     | architecture information:
[2025-07-27 10:52:46] 2025-07-27 14:52:33,811 | INFO     | executing command: cat /etc/os-release
[2025-07-27 10:52:46] 2025-07-27 14:52:33,862 | INFO     | cat /etc/os-release:
[2025-07-27 10:52:46] NAME="CentOS Linux"
[2025-07-27 10:52:46] VERSION="7 (Core)"
[2025-07-27 10:52:46] ID="centos"
[2025-07-27 10:52:46] ID_LIKE="rhel fedora"
[2025-07-27 10:52:46] VERSION_ID="7"
[2025-07-27 10:52:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 10:52:46] ANSI_COLOR="0;31"
[2025-07-27 10:52:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 10:52:46] HOME_URL="https://www.centos.org/"
[2025-07-27 10:52:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 10:52:46] 
[2025-07-27 10:52:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 10:52:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 10:52:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 10:52:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 10:52:46] 
[2025-07-27 10:52:46] 2025-07-27 14:52:33,862 | INFO     | ***************************************
[2025-07-27 10:52:46] 2025-07-27 14:52:34,365 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 10:52:46] 2025-07-27 14:52:34,409 | INFO     | sufficient remaining disk space (76284952576 B)
[2025-07-27 10:52:46] 2025-07-27 14:52:34,409 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 10:52:46] 2025-07-27 14:52:34,410 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 10:52:46] 2025-07-27 14:52:34,410 | INFO     | update_server=False
[2025-07-27 10:52:46] 2025-07-27 14:52:34,410 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 10:52:46] 2025-07-27 14:52:34,410 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 10:52:46] 2025-07-27 14:52:34,411 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-27 10:52:46] 2025-07-27 14:52:34,412 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 10:52:46] 2025-07-27 14:52:34,412 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 10:52:46] 2025-07-27 14:52:34,412 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 10:52:46] 2025-07-27 14:52:34,509 | INFO     | all job control threads have been joined
[2025-07-27 10:52:46] 2025-07-27 14:52:34,618 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 10:52:46] 2025-07-27 14:52:34,619 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 10:52:46] 2025-07-27 14:52:34,619 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 10:52:46] 2025-07-27 14:52:34,620 | INFO     | will abort loop
[2025-07-27 10:52:46] 2025-07-27 14:52:34,960 | INFO     | all data control threads have been joined
[2025-07-27 10:52:46] 2025-07-27 14:52:35,415 | INFO     | [job] retrieve thread has finished
[2025-07-27 10:52:46] 2025-07-27 14:52:35,480 | INFO     | [payload] failed_post thread has finished
[2025-07-27 10:52:46] 2025-07-27 14:52:35,486 | INFO     | all payload control threads have been joined
[2025-07-27 10:52:46] 2025-07-27 14:52:35,516 | INFO     | [job] control thread has finished
[2025-07-27 10:52:46] 2025-07-27 14:52:35,611 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 10:52:46] 2025-07-27 14:52:35,626 | INFO     | [job] job monitor thread has finished
[2025-07-27 10:52:46] 2025-07-27 14:52:35,803 | INFO     | [payload] validate_post thread has finished
[2025-07-27 10:52:46] 2025-07-27 14:52:35,971 | INFO     | [data] control thread has finished
[2025-07-27 10:52:46] 2025-07-27 14:52:36,070 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 10:52:46] 2025-07-27 14:52:36,107 | INFO     | [data] copytool_in thread has finished
[2025-07-27 10:52:46] 2025-07-27 14:52:36,139 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 10:52:46] 2025-07-27 14:52:36,243 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 10:52:46] 2025-07-27 14:52:36,262 | INFO     | [job] validate thread has finished
[2025-07-27 10:52:46] 2025-07-27 14:52:36,276 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 10:52:46] 2025-07-27 14:52:36,417 | INFO     | [data] copytool_out thread has finished
[2025-07-27 10:52:46] 2025-07-27 14:52:36,492 | INFO     | [payload] control thread has finished
[2025-07-27 10:52:46] 2025-07-27 14:52:36,577 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 10:52:46] 2025-07-27 14:52:37,583 | INFO     | [job] queue monitor thread has finished
[2025-07-27 10:52:46] 2025-07-27 14:52:40,149 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 10:52:46] 2025-07-27 14:52:40,799 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139720565278528)>', '<ExcThread(monitor, started 139719782430464)>']
[2025-07-27 10:52:46] 2025-07-27 14:52:41,452 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 10:52:46] 2025-07-27 14:52:41,453 | INFO     | [monitor] control thread has ended
[2025-07-27 10:52:46] 2025-07-27 14:52:45,825 | INFO     | all workflow threads have been joined
[2025-07-27 10:52:46] 2025-07-27 14:52:45,826 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 10:52:46] 2025-07-27 14:52:45,826 | INFO     | traces error code: 0
[2025-07-27 10:52:46] 2025-07-27 14:52:45,826 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 10:52:46] 2025-07-27 14:52:46,247 [wrapper] ==== pilot stdout END ====
[2025-07-27 10:52:46] 2025-07-27 14:52:46,253 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 10:52:46] 2025-07-27 14:52:46,257 [wrapper] pilotpid: 2853558
[2025-07-27 10:52:46] 2025-07-27 14:52:46,261 [wrapper] Pilot exit status: 0
[2025-07-27 10:52:46] 2025-07-27 14:52:46,307 [wrapper] pandaids: 6745902185
[2025-07-27 10:52:46] 2025-07-27 14:52:46,390 [wrapper] cleanup supervisor_pilot 4078983 2853559
[2025-07-27 10:52:46] 2025-07-27 14:52:46,393 [wrapper] Test setup, not cleaning
[2025-07-27 10:52:46] 2025-07-27 14:52:46,398 [wrapper] apfmon messages muted
[2025-07-27 10:52:46] 2025-07-27 14:52:46,401 [wrapper] ==== wrapper stdout END ====
[2025-07-27 10:52:46] 2025-07-27 14:52:46,404 [wrapper] ==== wrapper stderr END ====
[2025-07-27 10:52:46]  *** Error codes and diagnostics ***
[2025-07-27 10:52:46]     "exeErrorCode": 0,
[2025-07-27 10:52:46]     "exeErrorDiag": "",
[2025-07-27 10:52:46]     "pilotErrorCode": 0,
[2025-07-27 10:52:46]     "pilotErrorDiag": "",
[2025-07-27 10:52:46]  *** Listing of results directory ***
[2025-07-27 10:52:46] total 406536
[2025-07-27 10:52:46] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 19:40 pilot3.tar.gz
[2025-07-27 10:52:46] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 19:53 queuedata.json
[2025-07-27 10:52:46] -rwx------. 1 boincer umatlas     36292 Jul 26 19:55 runpilot2-wrapper.sh
[2025-07-27 10:52:46] -rw-r--r--. 1 boincer umatlas       100 Jul 27 07:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 10:52:46] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 07:01 run_atlas
[2025-07-27 10:52:46] -rw-r--r--. 1 boincer umatlas       105 Jul 27 07:01 job.xml
[2025-07-27 10:52:46] -rw-r--r--. 2 boincer umatlas 237813513 Jul 27 07:01 EVNT.45758859._000003.pool.root.1
[2025-07-27 10:52:46] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 07:01 start_atlas.sh
[2025-07-27 10:52:46] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 07:01 shared
[2025-07-27 10:52:46] -rw-r--r--. 2 boincer umatlas    542885 Jul 27 07:01 input.tar.gz
[2025-07-27 10:52:46] -rw-r--r--. 1 boincer umatlas         0 Jul 27 07:01 boinc_lockfile
[2025-07-27 10:52:46] -rw-r--r--. 1 boincer umatlas      2571 Jul 27 07:01 pandaJob.out
[2025-07-27 10:52:46] -rw-------. 1 boincer umatlas    980117 Jul 27 07:01 agis_schedconf.cvmfs.json
[2025-07-27 10:52:46] drwx------. 4 boincer umatlas      4096 Jul 27 07:01 pilot3
[2025-07-27 10:52:46] -rw-r--r--. 1 boincer umatlas      6844 Jul 27 10:45 init_data.xml
[2025-07-27 10:52:46] -rw-------. 1 boincer umatlas 171610288 Jul 27 10:51 HITS.45758861._000051.pool.root.1
[2025-07-27 10:52:46] -rw-r--r--. 1 boincer umatlas       531 Jul 27 10:51 boinc_task_state.xml
[2025-07-27 10:52:46] -rw-------. 1 boincer umatlas      1039 Jul 27 10:52 memory_monitor_summary.json
[2025-07-27 10:52:46] -rw-------. 1 boincer umatlas   1593052 Jul 27 10:52 agis_ddmendpoints.agis.ALL.json
[2025-07-27 10:52:46] -rw-------. 1 boincer umatlas    428018 Jul 27 10:52 log.45758861._000051.job.log.tgz.1
[2025-07-27 10:52:46] -rw-------. 1 boincer umatlas        95 Jul 27 10:52 pilot_heartbeat.json
[2025-07-27 10:52:46] -rw-------. 1 boincer umatlas      7806 Jul 27 10:52 heartbeat.json
[2025-07-27 10:52:46] -rw-r--r--. 1 boincer umatlas        28 Jul 27 10:52 wrapper_checkpoint.txt
[2025-07-27 10:52:46] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 10:52 boinc_mmap_file
[2025-07-27 10:52:46] -rw-------. 1 boincer umatlas      4666 Jul 27 10:52 pilotlog.txt
[2025-07-27 10:52:46] -rw-------. 1 boincer umatlas   1066234 Jul 27 10:52 log.45758861._000051.job.log.1
[2025-07-27 10:52:46] -rw-------. 1 boincer umatlas       357 Jul 27 10:52 output.list
[2025-07-27 10:52:46] -rw-r--r--. 1 boincer umatlas       620 Jul 27 10:52 runtime_log
[2025-07-27 10:52:46] -rw-------. 1 boincer umatlas   1515520 Jul 27 10:52 result.tar.gz
[2025-07-27 10:52:46] -rw-------. 1 boincer umatlas       658 Jul 27 10:52 sCfLDmwu3z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGYTLDmP4V0hm.diag
[2025-07-27 10:52:46] -rw-r--r--. 1 boincer umatlas      8668 Jul 27 10:52 runtime_log.err
[2025-07-27 10:52:46] -rw-r--r--. 1 boincer umatlas     21063 Jul 27 10:52 stderr.txt
[2025-07-27 10:52:46] HITS file was successfully produced:
[2025-07-27 10:52:46] -rw-------. 1 boincer umatlas 171610288 Jul 27 10:51 shared/HITS.pool.root.1
[2025-07-27 10:52:46]  *** Contents of shared directory: ***
[2025-07-27 10:52:46] total 401864
[2025-07-27 10:52:46] -rw-r--r--. 2 boincer umatlas 237813513 Jul 27 07:01 ATLAS.root_0
[2025-07-27 10:52:46] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 07:01 start_atlas.sh
[2025-07-27 10:52:46] -rw-r--r--. 2 boincer umatlas    542885 Jul 27 07:01 input.tar.gz
[2025-07-27 10:52:46] -rw-------. 1 boincer umatlas 171610288 Jul 27 10:51 HITS.pool.root.1
[2025-07-27 10:52:46] -rw-------. 1 boincer umatlas   1515520 Jul 27 10:52 result.tar.gz
10:52:47 (2848568): run_atlas exited; CPU time 58201.486426
10:52:47 (2848568): called boinc_finish(0)

</stderr_txt>
]]>

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