Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:06:15 (2672223): wrapper (7.7.26015): starting
01:06:15 (2672223): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 01:06:15] Arguments: --nthreads 8
[2025-07-27 01:06:15] Threads: 8
[2025-07-27 01:06:15] Checking for CVMFS
[2025-07-27 01:06:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 01:06:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 01:06:15] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 01:06:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 01:06:16] 2.13.1.0 675479 13716 222860 148800 2 502 33467435 40960000 12911 16776704 0 36043400 99.869 26579809 52750 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 01:06:16] CVMFS is ok
[2025-07-27 01:06:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 01:06:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 01:06:16] Further information can be found at the LHC@home message board.
[2025-07-27 01:06:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 01:06:16] Checking for apptainer binary...
[2025-07-27 01:06:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 01:06:16] Running /usr/bin/apptainer --version
[2025-07-27 01:06:16] apptainer version 1.4.1-1.el9
[2025-07-27 01:06:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 01:06:16] c-212-11.aglt2.org
[2025-07-27 01:06:16] apptainer works
[2025-07-27 01:06:16] Set ATHENA_PROC_NUMBER=8
[2025-07-27 01:06:16] Set ATHENA_CORE_NUMBER=8
[2025-07-27 01:06:16] Starting ATLAS job with PandaID=6745902249
[2025-07-27 01:06:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 02:45:19]  *** The last 200 lines of the pilot log: ***
[2025-07-27 02:45:19]  protocol_id=None
[2025-07-27 02:45:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 02:45:19]  replicas=None
[2025-07-27 02:45:19]  scope=mc23_13p6TeV
[2025-07-27 02:45:19]  status=None
[2025-07-27 02:45:19]  status_code=0
[2025-07-27 02:45:19]  storage_token=
[2025-07-27 02:45:19]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6745902249/log.45758861._000115.job.log.tgz.1
[2025-07-27 02:45:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3c/6f/log.45758861._000115.job.log.tgz.1
[2025-07-27 02:45:19]  workdir=None
[2025-07-27 02:45:19] ]
[2025-07-27 02:45:19] 2025-07-27 06:44:39,900 | INFO     | transferring file log.45758861._000115.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6745902249/log.45758861._000115.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 02:45:19] 2025-07-27 06:44:39,901 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6745902249/log.45758861._000115.job.log.tgz.1 /tmp/boinchome/slots/1/log.45758861._000115.job
[2025-07-27 02:45:19] 2025-07-27 06:44:39,925 | INFO     | adding to output.list: log.45758861._000115.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3c/6f/log.45758861._000115.job.log.tg
[2025-07-27 02:45:19] 2025-07-27 06:44:39,926 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 02:45:19] 2025-07-27 06:44:39,927 | INFO     | summary of transferred files:
[2025-07-27 02:45:19] 2025-07-27 06:44:39,927 | INFO     |  -- lfn=log.45758861._000115.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 02:45:19] 2025-07-27 06:44:39,927 | INFO     | stage-out finished correctly
[2025-07-27 02:45:19] 2025-07-27 06:44:40,011 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 02:45:19] 2025-07-27 06:44:40,585 | INFO     | monitor loop #429: job 0:6745902249 is in state 'finished'
[2025-07-27 02:45:19] 2025-07-27 06:44:40,585 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 02:45:19] 2025-07-27 06:44:42,329 | INFO     | job 6745902249 has state=finished
[2025-07-27 02:45:19] 2025-07-27 06:44:42,329 | INFO     | preparing for final server update for job 6745902249 in state='finished'
[2025-07-27 02:45:19] 2025-07-27 06:44:42,330 | INFO     | this job has now completed (state=finished)
[2025-07-27 02:45:19] 2025-07-27 06:44:42,330 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 02:45:19] 2025-07-27 06:44:42,331 | INFO     | log transfer has been attempted: DONE
[2025-07-27 02:45:19] 2025-07-27 06:44:42,331 | INFO     | job 6745902249 has finished - writing final server update
[2025-07-27 02:45:19] 2025-07-27 06:44:42,331 | INFO     | total number of processed events: 400 (read)
[2025-07-27 02:45:19] 2025-07-27 06:44:42,332 | INFO     | executing command: lscpu
[2025-07-27 02:45:19] 2025-07-27 06:44:42,401 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 02:45:19] 2025-07-27 06:44:43,084 | INFO     | PID=2676057 has CPU usage=12.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-27 02:45:19] 2025-07-27 06:44:43,084 | INFO     | .. there are 15 such processes running
[2025-07-27 02:45:19] 2025-07-27 06:44:43,088 | INFO     | monitor loop #430: job 0:6745902249 is in state 'finished'
[2025-07-27 02:45:19] 2025-07-27 06:44:43,088 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 02:45:19] 2025-07-27 06:44:45,591 | INFO     | monitor loop #431: job 0:6745902249 is in state 'finished'
[2025-07-27 02:45:19] 2025-07-27 06:44:45,591 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 02:45:19] 2025-07-27 06:44:47,811 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 02:45:19] 2025-07-27 06:44:47,817 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3035.7266041666676
[2025-07-27 02:45:19] 2025-07-27 06:44:47,830 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745902249/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 02:45:19] 2025-07-27 06:44:47,831 | INFO     | extracted standard info from prmon json
[2025-07-27 02:45:19] 2025-07-27 06:44:47,831 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 02:45:19] 2025-07-27 06:44:47,831 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 02:45:19] 2025-07-27 06:44:47,831 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 02:45:19] 2025-07-27 06:44:47,831 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 02:45:19] 2025-07-27 06:44:47,833 | INFO     | fitting pss+swap vs Time
[2025-07-27 02:45:19] 2025-07-27 06:44:47,834 | INFO     | sum of square deviations: 226022842.5
[2025-07-27 02:45:19] 2025-07-27 06:44:47,834 | INFO     | sum of deviations: 63221955.499999866
[2025-07-27 02:45:19] 2025-07-27 06:44:47,834 | INFO     | mean x: 1753595838.5
[2025-07-27 02:45:19] 2025-07-27 06:44:47,834 | INFO     | mean y: 2545360.566666667
[2025-07-27 02:45:19] 2025-07-27 06:44:47,834 | INFO     | -- intersect: -487961514.04991966
[2025-07-27 02:45:19] 2025-07-27 06:44:47,834 | INFO     | intersect: -487961514.04991966
[2025-07-27 02:45:19] 2025-07-27 06:44:47,835 | INFO     | chi2: 0.007560842142541332
[2025-07-27 02:45:19] 2025-07-27 06:44:47,835 | INFO     | -- intersect: -487961514.04991966
[2025-07-27 02:45:19] 2025-07-27 06:44:47,835 | INFO     | current memory leak: 0.28 B/s (using 90 data points, chi2=0.01)
[2025-07-27 02:45:19] 2025-07-27 06:44:47,835 | INFO     | could have reported an average CPU frequency of 3010 MHz (7 samples)
[2025-07-27 02:45:19] 2025-07-27 06:44:47,835 | INFO     | ..............................
[2025-07-27 02:45:19] 2025-07-27 06:44:47,835 | INFO     | . Timing measurements:
[2025-07-27 02:45:19] 2025-07-27 06:44:47,835 | INFO     | . get job = 0 s
[2025-07-27 02:45:19] 2025-07-27 06:44:47,835 | INFO     | . initial setup = 2 s
[2025-07-27 02:45:19] 2025-07-27 06:44:47,836 | INFO     | . payload setup = 8 s
[2025-07-27 02:45:19] 2025-07-27 06:44:47,836 | INFO     | . stage-in = 0 s
[2025-07-27 02:45:19] 2025-07-27 06:44:47,836 | INFO     | . payload execution = 5862 s
[2025-07-27 02:45:19] 2025-07-27 06:44:47,836 | INFO     | . stage-out = 0 s
[2025-07-27 02:45:19] 2025-07-27 06:44:47,836 | INFO     | . log creation = 0 s
[2025-07-27 02:45:19] 2025-07-27 06:44:47,836 | INFO     | ..............................
[2025-07-27 02:45:19] 2025-07-27 06:44:47,955 | INFO     | 
[2025-07-27 02:45:19] 2025-07-27 06:44:47,955 | INFO     | job summary report
[2025-07-27 02:45:19] 2025-07-27 06:44:47,955 | INFO     | --------------------------------------------------
[2025-07-27 02:45:19] 2025-07-27 06:44:47,955 | INFO     | PanDA job id: 6745902249
[2025-07-27 02:45:19] 2025-07-27 06:44:47,956 | INFO     | task id: 45758861
[2025-07-27 02:45:19] 2025-07-27 06:44:47,956 | INFO     | errors: (none)
[2025-07-27 02:45:19] 2025-07-27 06:44:47,956 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 02:45:19] 2025-07-27 06:44:47,956 | INFO     | pilot state: finished 
[2025-07-27 02:45:19] 2025-07-27 06:44:47,956 | INFO     | transexitcode: 0
[2025-07-27 02:45:19] 2025-07-27 06:44:47,956 | INFO     | exeerrorcode: 0
[2025-07-27 02:45:19] 2025-07-27 06:44:47,956 | INFO     | exeerrordiag: 
[2025-07-27 02:45:19] 2025-07-27 06:44:47,956 | INFO     | exitcode: 0
[2025-07-27 02:45:19] 2025-07-27 06:44:47,956 | INFO     | exitmsg: OK
[2025-07-27 02:45:19] 2025-07-27 06:44:47,956 | INFO     | cpuconsumptiontime: 43641 s
[2025-07-27 02:45:19] 2025-07-27 06:44:47,956 | INFO     | nevents: 400
[2025-07-27 02:45:19] 2025-07-27 06:44:47,956 | INFO     | neventsw: 0
[2025-07-27 02:45:19] 2025-07-27 06:44:47,958 | INFO     | pid: 2683703
[2025-07-27 02:45:19] 2025-07-27 06:44:47,958 | INFO     | pgrp: 2683703
[2025-07-27 02:45:19] 2025-07-27 06:44:47,958 | INFO     | corecount: 8
[2025-07-27 02:45:19] 2025-07-27 06:44:47,958 | INFO     | event service: False
[2025-07-27 02:45:19] 2025-07-27 06:44:47,958 | INFO     | sizes: {0: 2397371, 1: 2397513, 6: 2397775, 11: 2397803, 5874: 2424395, 5875: 2433577, 5883: 2433715}
[2025-07-27 02:45:19] 2025-07-27 06:44:47,958 | INFO     | --------------------------------------------------
[2025-07-27 02:45:19] 2025-07-27 06:44:47,958 | INFO     | 
[2025-07-27 02:45:19] 2025-07-27 06:44:47,958 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-27 02:45:19] 2025-07-27 06:44:47,986 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 02:45:19] 2025-07-27 06:44:47,987 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 02:45:19] 2025-07-27 06:44:47,987 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 02:45:19] 2025-07-27 06:44:47,987 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 02:45:19] 2025-07-27 06:44:47,987 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 02:45:19] 2025-07-27 06:44:47,987 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 02:45:19] 2025-07-27 06:44:47,987 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 02:45:19] 2025-07-27 06:44:47,987 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 02:45:19] 2025-07-27 06:44:47,987 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 02:45:19] 2025-07-27 06:44:47,987 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 02:45:19] 2025-07-27 06:44:47,988 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 02:45:19] 2025-07-27 06:44:47,988 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 02:45:19] 2025-07-27 06:44:47,988 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 02:45:19] 2025-07-27 06:44:47,988 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 02:45:19] 2025-07-27 06:44:47,988 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 02:45:19] 2025-07-27 06:44:47,988 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 02:45:19] 2025-07-27 06:44:47,988 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 02:45:19] 2025-07-27 06:44:47,988 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 02:45:19] 2025-07-27 06:44:47,988 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 02:45:19] 2025-07-27 06:44:47,988 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 02:45:19] 2025-07-27 06:44:47,989 | INFO     | job 6745902249 has completed (purged errors)
[2025-07-27 02:45:19] 2025-07-27 06:44:47,989 | INFO     | overall cleanup function is called
[2025-07-27 02:45:19] 2025-07-27 06:44:48,997 | INFO     | --- collectZombieJob: --- 10, [2683703]
[2025-07-27 02:45:19] 2025-07-27 06:44:48,998 | INFO     | zombie collector waiting for pid 2683703
[2025-07-27 02:45:19] 2025-07-27 06:44:48,998 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 02:45:19] 2025-07-27 06:44:48,998 | INFO     | collected zombie processes
[2025-07-27 02:45:19] 2025-07-27 06:44:48,998 | INFO     | will attempt to kill all subprocesses of pid=2683703
[2025-07-27 02:45:19] 2025-07-27 06:44:49,369 | INFO     | process IDs to be killed: [2683703] (in reverse order)
[2025-07-27 02:45:19] 2025-07-27 06:44:49,481 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 02:45:19] 2025-07-27 06:44:49,481 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 02:45:19] 2025-07-27 06:44:49,492 | INFO     | did not find any defunct processes belonging to 2683703
[2025-07-27 02:45:19] 2025-07-27 06:44:49,501 | INFO     | did not find any defunct processes belonging to 2683703
[2025-07-27 02:45:19] 2025-07-27 06:44:49,501 | INFO     | ready for new job
[2025-07-27 02:45:19] 2025-07-27 06:44:49,501 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 02:45:19] 2025-07-27 06:44:49,502 | INFO     | ***************************************
[2025-07-27 02:45:19] 2025-07-27 06:44:49,502 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 02:45:19] 2025-07-27 06:44:49,503 | INFO     | ***************************************
[2025-07-27 02:45:19] 2025-07-27 06:44:49,503 | INFO     | 
[2025-07-27 02:45:19] 2025-07-27 06:44:49,506 | INFO     | architecture information:
[2025-07-27 02:45:19] 2025-07-27 06:44:49,507 | INFO     | executing command: cat /etc/os-release
[2025-07-27 02:45:19] 2025-07-27 06:44:49,525 | INFO     | cat /etc/os-release:
[2025-07-27 02:45:19] NAME="CentOS Linux"
[2025-07-27 02:45:19] VERSION="7 (Core)"
[2025-07-27 02:45:19] ID="centos"
[2025-07-27 02:45:19] ID_LIKE="rhel fedora"
[2025-07-27 02:45:19] VERSION_ID="7"
[2025-07-27 02:45:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 02:45:19] ANSI_COLOR="0;31"
[2025-07-27 02:45:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 02:45:19] HOME_URL="https://www.centos.org/"
[2025-07-27 02:45:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 02:45:19] 
[2025-07-27 02:45:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 02:45:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 02:45:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 02:45:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 02:45:19] 
[2025-07-27 02:45:19] 2025-07-27 06:44:49,525 | INFO     | ***************************************
[2025-07-27 02:45:19] 2025-07-27 06:44:50,027 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-27 02:45:19] 2025-07-27 06:44:50,045 | INFO     | sufficient remaining disk space (128492503040 B)
[2025-07-27 02:45:19] 2025-07-27 06:44:50,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 02:45:19] 2025-07-27 06:44:50,045 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 02:45:19] 2025-07-27 06:44:50,045 | INFO     | update_server=False
[2025-07-27 02:45:19] 2025-07-27 06:44:50,046 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 02:45:19] 2025-07-27 06:44:50,046 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 02:45:19] 2025-07-27 06:44:50,046 | INFO     | aborting loop
[2025-07-27 02:45:19] 2025-07-27 06:44:50,131 | INFO     | all job control threads have been joined
[2025-07-27 02:45:19] 2025-07-27 06:44:50,428 | INFO     | all data control threads have been joined
[2025-07-27 02:45:19] 2025-07-27 06:44:50,524 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 02:45:19] 2025-07-27 06:44:50,612 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 02:45:19] 2025-07-27 06:44:51,048 | INFO     | [job] retrieve thread has finished
[2025-07-27 02:45:19] 2025-07-27 06:44:51,051 | INFO     | [job] job monitor thread has finished
[2025-07-27 02:45:19] 2025-07-27 06:44:51,077 | INFO     | [payload] failed_post thread has finished
[2025-07-27 02:45:19] 2025-07-27 06:44:51,136 | INFO     | [job] control thread has finished
[2025-07-27 02:45:19] 2025-07-27 06:44:51,433 | INFO     | [data] control thread has finished
[2025-07-27 02:45:19] 2025-07-27 06:44:51,472 | INFO     | all payload control threads have been joined
[2025-07-27 02:45:19] 2025-07-27 06:44:51,500 | INFO     | [payload] validate_post thread has finished
[2025-07-27 02:45:19] 2025-07-27 06:44:51,974 | INFO     | [job] validate thread has finished
[2025-07-27 02:45:19] 2025-07-27 06:44:52,202 | INFO     | [data] copytool_in thread has finished
[2025-07-27 02:45:19] 2025-07-27 06:44:52,212 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 02:45:19] 2025-07-27 06:44:52,295 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 02:45:19] 2025-07-27 06:44:52,474 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 02:45:19] 2025-07-27 06:44:52,477 | INFO     | [payload] control thread has finished
[2025-07-27 02:45:19] 2025-07-27 06:44:52,529 | INFO     | [data] copytool_out thread has finished
[2025-07-27 02:45:19] 2025-07-27 06:44:52,933 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 02:45:19] 2025-07-27 06:44:53,939 | INFO     | [job] queue monitor thread has finished
[2025-07-27 02:45:19] 2025-07-27 06:44:54,620 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 02:45:19] 2025-07-27 06:45:00,198 | INFO     | job.realtimelogging is not enabled
[2025-07-27 02:45:19] 2025-07-27 06:45:01,199 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 02:45:19] 2025-07-27 06:45:02,740 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140246428235584)>', '<ExcThread(monitor, started 140246075287296)>']
[2025-07-27 02:45:19] 2025-07-27 06:45:07,765 | INFO     | all workflow threads have been joined
[2025-07-27 02:45:19] 2025-07-27 06:45:07,765 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 02:45:19] 2025-07-27 06:45:07,766 | INFO     | traces error code: 0
[2025-07-27 02:45:19] 2025-07-27 06:45:07,766 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 02:45:19] 2025-07-27 06:45:19,582 | INFO     | PID=2676057 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 02:45:19] 2025-07-27 06:45:19,583 | INFO     | .. there are 15 such processes running
[2025-07-27 02:45:19] 2025-07-27 06:45:19,583 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 02:45:19] 2025-07-27 06:45:19,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 02:45:19] 2025-07-27 06:45:19,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 02:45:19] 2025-07-27 06:45:19,584 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 02:45:19] 2025-07-27 06:45:19,584 | INFO     | [monitor] control thread has ended
[2025-07-27 02:45:19] 2025-07-27 06:45:19,665 [wrapper] ==== pilot stdout END ====
[2025-07-27 02:45:19] 2025-07-27 06:45:19,667 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 02:45:19] 2025-07-27 06:45:19,672 [wrapper] pilotpid: 2676057
[2025-07-27 02:45:19] 2025-07-27 06:45:19,677 [wrapper] Pilot exit status: 0
[2025-07-27 02:45:19] 2025-07-27 06:45:19,692 [wrapper] pandaids: 6745902249
[2025-07-27 02:45:19] 2025-07-27 06:45:19,775 [wrapper] cleanup supervisor_pilot 2821119 2676058
[2025-07-27 02:45:19] 2025-07-27 06:45:19,780 [wrapper] Test setup, not cleaning
[2025-07-27 02:45:19] 2025-07-27 06:45:19,786 [wrapper] apfmon messages muted
[2025-07-27 02:45:19] 2025-07-27 06:45:19,789 [wrapper] ==== wrapper stdout END ====
[2025-07-27 02:45:19] 2025-07-27 06:45:19,792 [wrapper] ==== wrapper stderr END ====
[2025-07-27 02:45:19]  *** Error codes and diagnostics ***
[2025-07-27 02:45:19]     "exeErrorCode": 0,
[2025-07-27 02:45:19]     "exeErrorDiag": "",
[2025-07-27 02:45:19]     "pilotErrorCode": 0,
[2025-07-27 02:45:19]     "pilotErrorDiag": "",
[2025-07-27 02:45:19]  *** Listing of results directory ***
[2025-07-27 02:45:19] total 409168
[2025-07-27 02:45:19] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 19:58 pilot3.tar.gz
[2025-07-27 02:45:19] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 20:00 queuedata.json
[2025-07-27 02:45:19] -rwx------. 1 boincer umatlas     36292 Jul 26 20:00 runpilot2-wrapper.sh
[2025-07-27 02:45:19] -rw-r--r--. 1 boincer umatlas       100 Jul 27 01:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 02:45:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 01:06 run_atlas
[2025-07-27 02:45:19] -rw-r--r--. 1 boincer umatlas       105 Jul 27 01:06 job.xml
[2025-07-27 02:45:19] -rw-r--r--. 2 boincer umatlas 240927338 Jul 27 01:06 EVNT.45758859._000005.pool.root.1
[2025-07-27 02:45:19] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 01:06 start_atlas.sh
[2025-07-27 02:45:19] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 01:06 shared
[2025-07-27 02:45:19] -rw-r--r--. 2 boincer umatlas    542887 Jul 27 01:06 input.tar.gz
[2025-07-27 02:45:19] -rw-r--r--. 1 boincer umatlas         0 Jul 27 01:06 boinc_lockfile
[2025-07-27 02:45:19] -rw-r--r--. 1 boincer umatlas      2576 Jul 27 01:06 pandaJob.out
[2025-07-27 02:45:19] -rw-------. 1 boincer umatlas    980125 Jul 27 01:06 agis_schedconf.cvmfs.json
[2025-07-27 02:45:19] -rw-------. 1 boincer umatlas   1593052 Jul 27 01:06 agis_ddmendpoints.agis.ALL.json
[2025-07-27 02:45:19] drwx------. 4 boincer umatlas      4096 Jul 27 01:06 pilot3
[2025-07-27 02:45:19] -rw-r--r--. 1 boincer umatlas      6944 Jul 27 02:39 init_data.xml
[2025-07-27 02:45:19] -rw-------. 1 boincer umatlas 172415008 Jul 27 02:44 HITS.45758861._000115.pool.root.1
[2025-07-27 02:45:19] -rw-r--r--. 1 boincer umatlas       529 Jul 27 02:44 boinc_task_state.xml
[2025-07-27 02:45:19] -rw-------. 1 boincer umatlas      1029 Jul 27 02:44 memory_monitor_summary.json
[2025-07-27 02:45:19] -rw-------. 1 boincer umatlas    319453 Jul 27 02:44 log.45758861._000115.job.log.tgz.1
[2025-07-27 02:45:19] -rw-------. 1 boincer umatlas      7757 Jul 27 02:44 heartbeat.json
[2025-07-27 02:45:19] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 02:45 boinc_mmap_file
[2025-07-27 02:45:19] -rw-r--r--. 1 boincer umatlas        27 Jul 27 02:45 wrapper_checkpoint.txt
[2025-07-27 02:45:19] -rw-------. 1 boincer umatlas       823 Jul 27 02:45 pilotlog.txt
[2025-07-27 02:45:19] -rw-------. 1 boincer umatlas        95 Jul 27 02:45 pilot_heartbeat.json
[2025-07-27 02:45:19] -rw-------. 1 boincer umatlas    565527 Jul 27 02:45 log.45758861._000115.job.log.1
[2025-07-27 02:45:19] -rw-------. 1 boincer umatlas       357 Jul 27 02:45 output.list
[2025-07-27 02:45:19] -rw-r--r--. 1 boincer umatlas       620 Jul 27 02:45 runtime_log
[2025-07-27 02:45:19] -rw-------. 1 boincer umatlas    901120 Jul 27 02:45 result.tar.gz
[2025-07-27 02:45:19] -rw-------. 1 boincer umatlas       651 Jul 27 02:45 xsULDmnz3z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmre1KDmCVouqm.diag
[2025-07-27 02:45:19] -rw-r--r--. 1 boincer umatlas      8660 Jul 27 02:45 runtime_log.err
[2025-07-27 02:45:19] -rw-r--r--. 1 boincer umatlas     21889 Jul 27 02:45 stderr.txt
[2025-07-27 02:45:19] HITS file was successfully produced:
[2025-07-27 02:45:19] -rw-------. 1 boincer umatlas 172415008 Jul 27 02:44 shared/HITS.pool.root.1
[2025-07-27 02:45:19]  *** Contents of shared directory: ***
[2025-07-27 02:45:19] total 405096
[2025-07-27 02:45:19] -rw-r--r--. 2 boincer umatlas 240927338 Jul 27 01:06 ATLAS.root_0
[2025-07-27 02:45:19] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 01:06 start_atlas.sh
[2025-07-27 02:45:19] -rw-r--r--. 2 boincer umatlas    542887 Jul 27 01:06 input.tar.gz
[2025-07-27 02:45:19] -rw-------. 1 boincer umatlas 172415008 Jul 27 02:44 HITS.pool.root.1
[2025-07-27 02:45:19] -rw-------. 1 boincer umatlas    901120 Jul 27 02:45 result.tar.gz
02:45:21 (2672223): run_atlas exited; CPU time 43814.526612
02:45:21 (2672223): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN