Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:38:01 (874805): wrapper (7.7.26015): starting
19:38:01 (874805): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 19:38:01] Arguments: --nthreads 4
[2025-07-27 19:38:01] Threads: 4
[2025-07-27 19:38:01] Checking for CVMFS
[2025-07-27 19:38:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 19:38:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 19:38:01] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 19:38:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 19:38:01] 2.9.2.0 3706633 4394 94164 148819 3 57 35842261 36864000 0 130560 0 3551634 99.991 156828 2492 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-27 19:38:01] CVMFS is ok
[2025-07-27 19:38:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 19:38:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 19:38:01] Further information can be found at the LHC@home message board.
[2025-07-27 19:38:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 19:38:01] Checking for apptainer binary...
[2025-07-27 19:38:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 19:38:01] Running /usr/bin/apptainer --version
[2025-07-27 19:38:02] apptainer version 1.4.1-1.1
[2025-07-27 19:38:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 19:38:02] thA309
[2025-07-27 19:38:02] apptainer works
[2025-07-27 19:38:02] Set ATHENA_PROC_NUMBER=4
[2025-07-27 19:38:02] Set ATHENA_CORE_NUMBER=4
[2025-07-27 19:38:02] Starting ATLAS job with PandaID=6745899358
[2025-07-27 19:38:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 21:03:41]  *** The last 200 lines of the pilot log: ***
[2025-07-27 21:03:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 21:03:41]  replicas=None
[2025-07-27 21:03:41]  scope=mc23_13p6TeV
[2025-07-27 21:03:41]  status=None
[2025-07-27 21:03:41]  status_code=0
[2025-07-27 21:03:41]  storage_token=
[2025-07-27 21:03:41]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6745899358/log.45759361._000100.job.log.tgz.1
[2025-07-27 21:03:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/de/log.45759361._000100.job.log.tgz.1
[2025-07-27 21:03:41]  workdir=None
[2025-07-27 21:03:41] ]
[2025-07-27 21:03:41] 2025-07-27 19:02:59,162 | INFO     | transferring file log.45759361._000100.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6745899358/log.45759361._000100.job.log.tgz.1 to /local/data/boinc/
[2025-07-27 21:03:41] 2025-07-27 19:02:59,162 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6745899358/log.45759361._000100.job.log.tgz.1 /local/data/boinc/slots/0/log.45759361._0001
[2025-07-27 21:03:41] 2025-07-27 19:02:59,181 | INFO     | adding to output.list: log.45759361._000100.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/de/log.45759361._000100.job.log.tg
[2025-07-27 21:03:41] 2025-07-27 19:02:59,181 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 21:03:41] 2025-07-27 19:02:59,181 | INFO     | summary of transferred files:
[2025-07-27 21:03:41] 2025-07-27 19:02:59,181 | INFO     |  -- lfn=log.45759361._000100.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 21:03:41] 2025-07-27 19:02:59,181 | INFO     | stage-out finished correctly
[2025-07-27 21:03:41] 2025-07-27 19:02:59,737 | WARNING  | process 885167 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 21:03:41] 2025-07-27 19:02:59,738 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745899358/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 21:03:41] 2025-07-27 19:02:59,781 | INFO     | number of running child processes to parent process 885167: 1
[2025-07-27 21:03:41] 2025-07-27 19:02:59,781 | INFO     | maximum number of monitored processes: 6
[2025-07-27 21:03:41] 2025-07-27 19:03:00,113 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 21:03:41] 2025-07-27 19:03:02,286 | INFO     | monitor loop #391: job 0:6745899358 is in state 'finished'
[2025-07-27 21:03:41] 2025-07-27 19:03:02,286 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 21:03:41] 2025-07-27 19:03:02,746 | INFO     | job 6745899358 has state=finished
[2025-07-27 21:03:41] 2025-07-27 19:03:02,746 | INFO     | preparing for final server update for job 6745899358 in state='finished'
[2025-07-27 21:03:41] 2025-07-27 19:03:02,746 | INFO     | this job has now completed (state=finished)
[2025-07-27 21:03:41] 2025-07-27 19:03:02,747 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 21:03:41] 2025-07-27 19:03:02,747 | INFO     | log transfer has been attempted: DONE
[2025-07-27 21:03:41] 2025-07-27 19:03:02,747 | INFO     | job 6745899358 has finished - writing final server update
[2025-07-27 21:03:41] 2025-07-27 19:03:02,747 | INFO     | total number of processed events: 400 (read)
[2025-07-27 21:03:41] 2025-07-27 19:03:02,747 | INFO     | executing command: lscpu
[2025-07-27 21:03:41] 2025-07-27 19:03:02,769 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 21:03:41] 2025-07-27 19:03:04,789 | INFO     | monitor loop #392: job 0:6745899358 is in state 'finished'
[2025-07-27 21:03:41] 2025-07-27 19:03:04,789 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 21:03:41] 2025-07-27 19:03:07,292 | INFO     | monitor loop #393: job 0:6745899358 is in state 'finished'
[2025-07-27 21:03:41] 2025-07-27 19:03:07,292 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 21:03:41] 2025-07-27 19:03:08,397 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 21:03:41] 2025-07-27 19:03:08,399 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3569.3614374999997
[2025-07-27 21:03:41] 2025-07-27 19:03:08,400 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745899358/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 21:03:41] 2025-07-27 19:03:08,400 | INFO     | extracted standard info from prmon json
[2025-07-27 21:03:41] 2025-07-27 19:03:08,400 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 21:03:41] 2025-07-27 19:03:08,400 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 21:03:41] 2025-07-27 19:03:08,401 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 21:03:41] 2025-07-27 19:03:08,401 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 21:03:41] 2025-07-27 19:03:08,401 | INFO     | fitting pss+swap vs Time
[2025-07-27 21:03:41] 2025-07-27 19:03:08,402 | INFO     | sum of square deviations: 136095575.0
[2025-07-27 21:03:41] 2025-07-27 19:03:08,402 | INFO     | sum of deviations: -9410883945.999996
[2025-07-27 21:03:41] 2025-07-27 19:03:08,402 | INFO     | mean x: 1753640505.5
[2025-07-27 21:03:41] 2025-07-27 19:03:08,402 | INFO     | mean y: 2481184.6315789474
[2025-07-27 21:03:41] 2025-07-27 19:03:08,402 | INFO     | -- intersect: 121265110629.16179
[2025-07-27 21:03:41] 2025-07-27 19:03:08,402 | INFO     | intersect: 121265110629.16179
[2025-07-27 21:03:41] 2025-07-27 19:03:08,402 | INFO     | chi2: 0.08114211034176586
[2025-07-27 21:03:41] 2025-07-27 19:03:08,402 | INFO     | -- intersect: 121265110629.16179
[2025-07-27 21:03:41] 2025-07-27 19:03:08,402 | INFO     | current memory leak: -69.15 B/s (using 76 data points, chi2=0.08)
[2025-07-27 21:03:41] 2025-07-27 19:03:08,402 | INFO     | could have reported an average CPU frequency of 3710 MHz (6 samples)
[2025-07-27 21:03:41] 2025-07-27 19:03:08,402 | INFO     | ..............................
[2025-07-27 21:03:41] 2025-07-27 19:03:08,402 | INFO     | . Timing measurements:
[2025-07-27 21:03:41] 2025-07-27 19:03:08,402 | INFO     | . get job = 0 s
[2025-07-27 21:03:41] 2025-07-27 19:03:08,402 | INFO     | . initial setup = 1 s
[2025-07-27 21:03:41] 2025-07-27 19:03:08,402 | INFO     | . payload setup = 5 s
[2025-07-27 21:03:41] 2025-07-27 19:03:08,402 | INFO     | . stage-in = 0 s
[2025-07-27 21:03:41] 2025-07-27 19:03:08,402 | INFO     | . payload execution = 5065 s
[2025-07-27 21:03:41] 2025-07-27 19:03:08,402 | INFO     | . stage-out = 0 s
[2025-07-27 21:03:41] 2025-07-27 19:03:08,402 | INFO     | . log creation = 0 s
[2025-07-27 21:03:41] 2025-07-27 19:03:08,402 | INFO     | ..............................
[2025-07-27 21:03:41] 2025-07-27 19:03:08,443 | INFO     | 
[2025-07-27 21:03:41] 2025-07-27 19:03:08,443 | INFO     | job summary report
[2025-07-27 21:03:41] 2025-07-27 19:03:08,443 | INFO     | --------------------------------------------------
[2025-07-27 21:03:41] 2025-07-27 19:03:08,443 | INFO     | PanDA job id: 6745899358
[2025-07-27 21:03:41] 2025-07-27 19:03:08,443 | INFO     | task id: 45759361
[2025-07-27 21:03:41] 2025-07-27 19:03:08,443 | INFO     | errors: (none)
[2025-07-27 21:03:41] 2025-07-27 19:03:08,443 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 21:03:41] 2025-07-27 19:03:08,443 | INFO     | pilot state: finished 
[2025-07-27 21:03:41] 2025-07-27 19:03:08,443 | INFO     | transexitcode: 0
[2025-07-27 21:03:41] 2025-07-27 19:03:08,444 | INFO     | exeerrorcode: 0
[2025-07-27 21:03:41] 2025-07-27 19:03:08,444 | INFO     | exeerrordiag: 
[2025-07-27 21:03:41] 2025-07-27 19:03:08,444 | INFO     | exitcode: 0
[2025-07-27 21:03:41] 2025-07-27 19:03:08,444 | INFO     | exitmsg: OK
[2025-07-27 21:03:41] 2025-07-27 19:03:08,444 | INFO     | cpuconsumptiontime: 19247 s
[2025-07-27 21:03:41] 2025-07-27 19:03:08,444 | INFO     | nevents: 400
[2025-07-27 21:03:41] 2025-07-27 19:03:08,444 | INFO     | neventsw: 0
[2025-07-27 21:03:41] 2025-07-27 19:03:08,444 | INFO     | pid: 885167
[2025-07-27 21:03:41] 2025-07-27 19:03:08,444 | INFO     | pgrp: 885167
[2025-07-27 21:03:41] 2025-07-27 19:03:08,444 | INFO     | corecount: 4
[2025-07-27 21:03:41] 2025-07-27 19:03:08,444 | INFO     | event service: False
[2025-07-27 21:03:41] 2025-07-27 19:03:08,444 | INFO     | sizes: {0: 2397491, 3: 2397753, 10: 2397781, 5073: 2424244, 5075: 2433248, 5076: 2433304, 5084: 2433626}
[2025-07-27 21:03:41] 2025-07-27 19:03:08,444 | INFO     | --------------------------------------------------
[2025-07-27 21:03:41] 2025-07-27 19:03:08,444 | INFO     | 
[2025-07-27 21:03:41] 2025-07-27 19:03:08,444 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-27 21:03:41] 2025-07-27 19:03:08,461 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 21:03:41] 2025-07-27 19:03:08,461 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 21:03:41] 2025-07-27 19:03:08,462 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 21:03:41] 2025-07-27 19:03:08,462 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 21:03:41] 2025-07-27 19:03:08,462 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 21:03:41] 2025-07-27 19:03:08,462 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 21:03:41] 2025-07-27 19:03:08,462 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 21:03:41] 2025-07-27 19:03:08,462 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 21:03:41] 2025-07-27 19:03:08,462 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 21:03:41] 2025-07-27 19:03:08,462 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 21:03:41] 2025-07-27 19:03:08,462 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 21:03:41] 2025-07-27 19:03:08,462 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 21:03:41] 2025-07-27 19:03:08,462 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 21:03:41] 2025-07-27 19:03:08,462 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 21:03:41] 2025-07-27 19:03:08,462 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 21:03:41] 2025-07-27 19:03:08,462 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 21:03:41] 2025-07-27 19:03:08,462 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 21:03:41] 2025-07-27 19:03:08,462 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 21:03:41] 2025-07-27 19:03:08,462 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 21:03:41] 2025-07-27 19:03:08,462 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 21:03:41] 2025-07-27 19:03:08,462 | INFO     | job 6745899358 has completed (purged errors)
[2025-07-27 21:03:41] 2025-07-27 19:03:08,462 | INFO     | overall cleanup function is called
[2025-07-27 21:03:41] 2025-07-27 19:03:09,469 | INFO     | --- collectZombieJob: --- 10, [885167]
[2025-07-27 21:03:41] 2025-07-27 19:03:09,469 | INFO     | zombie collector waiting for pid 885167
[2025-07-27 21:03:41] 2025-07-27 19:03:09,469 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 21:03:41] 2025-07-27 19:03:09,469 | INFO     | collected zombie processes
[2025-07-27 21:03:41] 2025-07-27 19:03:09,470 | INFO     | will attempt to kill all subprocesses of pid=885167
[2025-07-27 21:03:41] 2025-07-27 19:03:09,520 | INFO     | process IDs to be killed: [885167] (in reverse order)
[2025-07-27 21:03:41] 2025-07-27 19:03:09,555 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 21:03:41] 2025-07-27 19:03:09,555 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 21:03:41] 2025-07-27 19:03:09,557 | INFO     | did not find any defunct processes belonging to 885167
[2025-07-27 21:03:41] 2025-07-27 19:03:09,558 | INFO     | did not find any defunct processes belonging to 885167
[2025-07-27 21:03:41] 2025-07-27 19:03:09,558 | INFO     | ready for new job
[2025-07-27 21:03:41] 2025-07-27 19:03:09,558 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 21:03:41] 2025-07-27 19:03:09,559 | INFO     | ***************************************
[2025-07-27 21:03:41] 2025-07-27 19:03:09,559 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 21:03:41] 2025-07-27 19:03:09,559 | INFO     | ***************************************
[2025-07-27 21:03:41] 2025-07-27 19:03:09,559 | INFO     | 
[2025-07-27 21:03:41] 2025-07-27 19:03:09,560 | INFO     | architecture information:
[2025-07-27 21:03:41] 2025-07-27 19:03:09,560 | INFO     | executing command: cat /etc/os-release
[2025-07-27 21:03:41] 2025-07-27 19:03:09,574 | INFO     | cat /etc/os-release:
[2025-07-27 21:03:41] NAME="CentOS Linux"
[2025-07-27 21:03:41] VERSION="7 (Core)"
[2025-07-27 21:03:41] ID="centos"
[2025-07-27 21:03:41] ID_LIKE="rhel fedora"
[2025-07-27 21:03:41] VERSION_ID="7"
[2025-07-27 21:03:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 21:03:41] ANSI_COLOR="0;31"
[2025-07-27 21:03:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 21:03:41] HOME_URL="https://www.centos.org/"
[2025-07-27 21:03:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 21:03:41] 
[2025-07-27 21:03:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 21:03:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 21:03:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 21:03:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 21:03:41] 
[2025-07-27 21:03:41] 2025-07-27 19:03:09,574 | INFO     | ***************************************
[2025-07-27 21:03:41] 2025-07-27 19:03:10,077 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-27 21:03:41] 2025-07-27 19:03:10,095 | INFO     | sufficient remaining disk space (218709884928 B)
[2025-07-27 21:03:41] 2025-07-27 19:03:10,096 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 21:03:41] 2025-07-27 19:03:10,096 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 21:03:41] 2025-07-27 19:03:10,096 | INFO     | update_server=False
[2025-07-27 21:03:41] 2025-07-27 19:03:10,096 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 21:03:41] 2025-07-27 19:03:10,096 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 21:03:41] 2025-07-27 19:03:10,096 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 21:03:41] 2025-07-27 19:03:10,663 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 21:03:41] 2025-07-27 19:03:10,691 | INFO     | all data control threads have been joined
[2025-07-27 21:03:41] 2025-07-27 19:03:10,759 | INFO     | all payload control threads have been joined
[2025-07-27 21:03:41] 2025-07-27 19:03:10,801 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 21:03:41] 2025-07-27 19:03:10,801 | INFO     | aborting loop
[2025-07-27 21:03:41] 2025-07-27 19:03:10,955 | INFO     | all job control threads have been joined
[2025-07-27 21:03:41] 2025-07-27 19:03:11,102 | INFO     | [job] retrieve thread has finished
[2025-07-27 21:03:41] 2025-07-27 19:03:11,102 | INFO     | [job] queue monitor thread has finished
[2025-07-27 21:03:41] 2025-07-27 19:03:11,337 | INFO     | [payload] validate_post thread has finished
[2025-07-27 21:03:41] 2025-07-27 19:03:11,580 | INFO     | [data] copytool_in thread has finished
[2025-07-27 21:03:41] 2025-07-27 19:03:11,642 | INFO     | [payload] failed_post thread has finished
[2025-07-27 21:03:41] 2025-07-27 19:03:11,696 | INFO     | [data] control thread has finished
[2025-07-27 21:03:41] 2025-07-27 19:03:11,764 | INFO     | [payload] control thread has finished
[2025-07-27 21:03:41] 2025-07-27 19:03:11,807 | INFO     | [job] job monitor thread has finished
[2025-07-27 21:03:41] 2025-07-27 19:03:11,961 | INFO     | [job] control thread has finished
[2025-07-27 21:03:41] 2025-07-27 19:03:12,017 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 21:03:41] 2025-07-27 19:03:12,102 | INFO     | [data] copytool_out thread has finished
[2025-07-27 21:03:41] 2025-07-27 19:03:12,350 | INFO     | [job] validate thread has finished
[2025-07-27 21:03:41] 2025-07-27 19:03:12,477 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 21:03:41] 2025-07-27 19:03:12,561 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 21:03:41] 2025-07-27 19:03:14,670 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 21:03:41] 2025-07-27 19:03:20,310 | INFO     | job.realtimelogging is not enabled
[2025-07-27 21:03:41] 2025-07-27 19:03:21,315 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 21:03:41] 2025-07-27 19:03:22,102 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140611823834944)>', '<ExcThread(monitor, started 140611038467840)>']
[2025-07-27 21:03:41] 2025-07-27 19:03:27,128 | INFO     | all workflow threads have been joined
[2025-07-27 21:03:41] 2025-07-27 19:03:27,128 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 21:03:41] 2025-07-27 19:03:27,128 | INFO     | traces error code: 0
[2025-07-27 21:03:41] 2025-07-27 19:03:27,128 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 21:03:41] 2025-07-27 19:03:40,918 | INFO     | PID=878503 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 21:03:41] 2025-07-27 19:03:40,918 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 21:03:41] 2025-07-27 19:03:40,918 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 21:03:41] 2025-07-27 19:03:40,918 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 21:03:41] 2025-07-27 19:03:40,918 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 21:03:41] 2025-07-27 19:03:40,918 | INFO     | [monitor] control thread has ended
[2025-07-27 21:03:41] 2025-07-27 19:03:40,995 [wrapper] ==== pilot stdout END ====
[2025-07-27 21:03:41] 2025-07-27 19:03:40,999 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 21:03:41] 2025-07-27 19:03:41,003 [wrapper] pilotpid: 878503
[2025-07-27 21:03:41] 2025-07-27 19:03:41,007 [wrapper] Pilot exit status: 0
[2025-07-27 21:03:41] 2025-07-27 19:03:41,020 [wrapper] pandaids: 6745899358
[2025-07-27 21:03:41] 2025-07-27 19:03:41,043 [wrapper] cleanup supervisor_pilot  898138 878504
[2025-07-27 21:03:41] 2025-07-27 19:03:41,047 [wrapper] Test setup, not cleaning
[2025-07-27 21:03:41] 2025-07-27 19:03:41,051 [wrapper] apfmon messages muted
[2025-07-27 21:03:41] 2025-07-27 19:03:41,055 [wrapper] ==== wrapper stdout END ====
[2025-07-27 21:03:41] 2025-07-27 19:03:41,058 [wrapper] ==== wrapper stderr END ====
[2025-07-27 21:03:41]  *** Error codes and diagnostics ***
[2025-07-27 21:03:41]     "exeErrorCode": 0,
[2025-07-27 21:03:41]     "exeErrorDiag": "",
[2025-07-27 21:03:41]     "pilotErrorCode": 0,
[2025-07-27 21:03:41]     "pilotErrorDiag": "",
[2025-07-27 21:03:41]  *** Listing of results directory ***
[2025-07-27 21:03:41] total 413164
[2025-07-27 21:03:41] -rw-r--r-- 1 boinc boinc    530466 Jul 27 01:40 pilot3.tar.gz
[2025-07-27 21:03:41] -rw-r--r-- 1 boinc boinc      5112 Jul 27 01:49 queuedata.json
[2025-07-27 21:03:41] -rwx------ 1 boinc boinc     36292 Jul 27 01:50 runpilot2-wrapper.sh
[2025-07-27 21:03:41] -rw-r--r-- 1 boinc boinc       100 Jul 27 19:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 21:03:41] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 19:38 run_atlas
[2025-07-27 21:03:41] -rw-r--r-- 1 boinc boinc       105 Jul 27 19:38 job.xml
[2025-07-27 21:03:41] -rw-r--r-- 2 boinc boinc 243218060 Jul 27 19:38 EVNT.45759358._000004.pool.root.1
[2025-07-27 21:03:41] -rw-r--r-- 2 boinc boinc    542890 Jul 27 19:38 input.tar.gz
[2025-07-27 21:03:41] -rw-r--r-- 2 boinc boinc     15095 Jul 27 19:38 start_atlas.sh
[2025-07-27 21:03:41] drwxrwx--x 2 boinc boinc      4096 Jul 27 19:38 shared
[2025-07-27 21:03:41] -rw-r--r-- 1 boinc boinc         0 Jul 27 19:38 boinc_setup_complete
[2025-07-27 21:03:41] -rw-r--r-- 1 boinc boinc      6455 Jul 27 19:38 init_data.xml
[2025-07-27 21:03:41] -rw-r--r-- 1 boinc boinc         0 Jul 27 19:38 boinc_lockfile
[2025-07-27 21:03:41] -rw-r--r-- 1 boinc boinc      2579 Jul 27 19:38 pandaJob.out
[2025-07-27 21:03:41] -rw------- 1 boinc boinc    980117 Jul 27 19:38 agis_schedconf.cvmfs.json
[2025-07-27 21:03:41] -rw------- 1 boinc boinc   1593052 Jul 27 19:38 agis_ddmendpoints.agis.ALL.json
[2025-07-27 21:03:41] drwx------ 4 boinc boinc      4096 Jul 27 19:38 pilot3
[2025-07-27 21:03:41] -rw------- 1 boinc boinc 174469727 Jul 27 21:02 HITS.45759361._000100.pool.root.1
[2025-07-27 21:03:41] -rw-r--r-- 1 boinc boinc       529 Jul 27 21:02 boinc_task_state.xml
[2025-07-27 21:03:41] -rw------- 1 boinc boinc      1022 Jul 27 21:02 memory_monitor_summary.json
[2025-07-27 21:03:41] -rw------- 1 boinc boinc    260549 Jul 27 21:02 log.45759361._000100.job.log.tgz.1
[2025-07-27 21:03:41] -rw------- 1 boinc boinc      7757 Jul 27 21:03 heartbeat.json
[2025-07-27 21:03:41] -rw-r--r-- 1 boinc boinc        27 Jul 27 21:03 wrapper_checkpoint.txt
[2025-07-27 21:03:41] -rw-r--r-- 1 boinc boinc      8192 Jul 27 21:03 boinc_mmap_file
[2025-07-27 21:03:41] -rw------- 1 boinc boinc       746 Jul 27 21:03 pilotlog.txt
[2025-07-27 21:03:41] -rw------- 1 boinc boinc        95 Jul 27 21:03 pilot_heartbeat.json
[2025-07-27 21:03:41] -rw------- 1 boinc boinc    493721 Jul 27 21:03 log.45759361._000100.job.log.1
[2025-07-27 21:03:41] -rw------- 1 boinc boinc       357 Jul 27 21:03 output.list
[2025-07-27 21:03:41] -rw-r--r-- 1 boinc boinc       620 Jul 27 21:03 runtime_log
[2025-07-27 21:03:41] -rw------- 1 boinc boinc    778240 Jul 27 21:03 result.tar.gz
[2025-07-27 21:03:41] -rw-r--r-- 1 boinc boinc      8734 Jul 27 21:03 runtime_log.err
[2025-07-27 21:03:41] -rw------- 1 boinc boinc       658 Jul 27 21:03 BIhKDmsp3z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeWTLDmLCwdin.diag
[2025-07-27 21:03:41] -rw-r--r-- 1 boinc boinc     21918 Jul 27 21:03 stderr.txt
[2025-07-27 21:03:41] HITS file was successfully produced:
[2025-07-27 21:03:41] -rw------- 1 boinc boinc 174469727 Jul 27 21:02 shared/HITS.pool.root.1
[2025-07-27 21:03:41]  *** Contents of shared directory: ***
[2025-07-27 21:03:41] total 409220
[2025-07-27 21:03:41] -rw-r--r-- 2 boinc boinc 243218060 Jul 27 19:38 ATLAS.root_0
[2025-07-27 21:03:41] -rw-r--r-- 2 boinc boinc    542890 Jul 27 19:38 input.tar.gz
[2025-07-27 21:03:41] -rw-r--r-- 2 boinc boinc     15095 Jul 27 19:38 start_atlas.sh
[2025-07-27 21:03:41] -rw------- 1 boinc boinc 174469727 Jul 27 21:02 HITS.pool.root.1
[2025-07-27 21:03:41] -rw------- 1 boinc boinc    778240 Jul 27 21:03 result.tar.gz
21:03:42 (874805): run_atlas exited; CPU time 19267.914494
21:03:42 (874805): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN