Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:53:11 (2956): wrapper (7.7.26015): starting
00:53:11 (2956): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 00:53:11] Arguments: --nthreads 12
[2025-07-27 00:53:11] Threads: 12
[2025-07-27 00:53:11] Checking for CVMFS
[2025-07-27 00:53:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 00:53:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 00:53:11] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 00:53:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 00:53:11] 2.11.2.0 3087 111501 95432 148800 0 59 18376932 20275200 1 130560 0 39659037 99.974 9103958 10357 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 00:53:11] CVMFS is ok
[2025-07-27 00:53:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 00:53:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 00:53:11] Further information can be found at the LHC@home message board.
[2025-07-27 00:53:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 00:53:11] Checking for apptainer binary...
[2025-07-27 00:53:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 00:53:11] Running /usr/bin/apptainer --version
[2025-07-27 00:53:11] apptainer version 1.3.2-1.el7
[2025-07-27 00:53:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 00:53:12] c-115-42.aglt2.org
[2025-07-27 00:53:12] apptainer works
[2025-07-27 00:53:12] Set ATHENA_PROC_NUMBER=12
[2025-07-27 00:53:12] Set ATHENA_CORE_NUMBER=12
[2025-07-27 00:53:12] Starting ATLAS job with PandaID=6745899304
[2025-07-27 00:53:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 02:12:22]  *** The last 200 lines of the pilot log: ***
[2025-07-27 02:12:22]  protocol_id=None
[2025-07-27 02:12:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 02:12:22]  replicas=None
[2025-07-27 02:12:22]  scope=mc23_13p6TeV
[2025-07-27 02:12:22]  status=None
[2025-07-27 02:12:22]  status_code=0
[2025-07-27 02:12:22]  storage_token=
[2025-07-27 02:12:22]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745899304/log.45759361._000046.job.log.tgz.1
[2025-07-27 02:12:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/db/log.45759361._000046.job.log.tgz.1
[2025-07-27 02:12:22]  workdir=None
[2025-07-27 02:12:22] ]
[2025-07-27 02:12:22] 2025-07-27 06:11:40,385 | INFO     | transferring file log.45759361._000046.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745899304/log.45759361._000046.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 02:12:22] 2025-07-27 06:11:40,386 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745899304/log.45759361._000046.job.log.tgz.1 /tmp/boinchome/slots/0/log.45759361._000046.job
[2025-07-27 02:12:22] 2025-07-27 06:11:40,409 | INFO     | adding to output.list: log.45759361._000046.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/db/log.45759361._000046.job.log.tg
[2025-07-27 02:12:22] 2025-07-27 06:11:40,410 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 02:12:22] 2025-07-27 06:11:40,410 | INFO     | summary of transferred files:
[2025-07-27 02:12:22] 2025-07-27 06:11:40,410 | INFO     |  -- lfn=log.45759361._000046.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 02:12:22] 2025-07-27 06:11:40,410 | INFO     | stage-out finished correctly
[2025-07-27 02:12:22] 2025-07-27 06:11:41,358 | INFO     | monitor loop #352: job 0:6745899304 is in state 'finished'
[2025-07-27 02:12:22] 2025-07-27 06:11:41,358 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 02:12:22] 2025-07-27 06:11:42,088 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 02:12:22] 2025-07-27 06:11:43,861 | INFO     | monitor loop #353: job 0:6745899304 is in state 'finished'
[2025-07-27 02:12:22] 2025-07-27 06:11:43,861 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 02:12:22] 2025-07-27 06:11:44,618 | INFO     | job 6745899304 has state=finished
[2025-07-27 02:12:22] 2025-07-27 06:11:44,618 | INFO     | preparing for final server update for job 6745899304 in state='finished'
[2025-07-27 02:12:22] 2025-07-27 06:11:44,619 | INFO     | this job has now completed (state=finished)
[2025-07-27 02:12:22] 2025-07-27 06:11:44,619 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 02:12:22] 2025-07-27 06:11:44,619 | INFO     | log transfer has been attempted: DONE
[2025-07-27 02:12:22] 2025-07-27 06:11:44,620 | INFO     | job 6745899304 has finished - writing final server update
[2025-07-27 02:12:22] 2025-07-27 06:11:44,620 | INFO     | total number of processed events: 400 (read)
[2025-07-27 02:12:22] 2025-07-27 06:11:44,621 | INFO     | executing command: lscpu
[2025-07-27 02:12:22] 2025-07-27 06:11:44,650 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 02:12:22] 2025-07-27 06:11:46,227 | INFO     | PID=6707 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 02:12:22] 2025-07-27 06:11:46,364 | INFO     | monitor loop #354: job 0:6745899304 is in state 'finished'
[2025-07-27 02:12:22] 2025-07-27 06:11:46,365 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 02:12:22] 2025-07-27 06:11:48,868 | INFO     | monitor loop #355: job 0:6745899304 is in state 'finished'
[2025-07-27 02:12:22] 2025-07-27 06:11:48,868 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 02:12:22] 2025-07-27 06:11:50,362 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 02:12:22] 2025-07-27 06:11:50,366 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1773.4166666666667
[2025-07-27 02:12:22] 2025-07-27 06:11:50,368 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745899304/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 02:12:22] 2025-07-27 06:11:50,369 | INFO     | extracted standard info from prmon json
[2025-07-27 02:12:22] 2025-07-27 06:11:50,369 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 02:12:22] 2025-07-27 06:11:50,369 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 02:12:22] 2025-07-27 06:11:50,370 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 02:12:22] 2025-07-27 06:11:50,370 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 02:12:22] 2025-07-27 06:11:50,372 | INFO     | fitting pss+swap vs Time
[2025-07-27 02:12:22] 2025-07-27 06:11:50,372 | INFO     | sum of square deviations: 106336877.5
[2025-07-27 02:12:22] 2025-07-27 06:11:50,372 | INFO     | sum of deviations: -6017056470.000001
[2025-07-27 02:12:22] 2025-07-27 06:11:50,372 | INFO     | mean x: 1753594444.5
[2025-07-27 02:12:22] 2025-07-27 06:11:50,373 | INFO     | mean y: 2784047.342857143
[2025-07-27 02:12:22] 2025-07-27 06:11:50,373 | INFO     | -- intersect: 99229666067.03337
[2025-07-27 02:12:22] 2025-07-27 06:11:50,373 | INFO     | intersect: 99229666067.03337
[2025-07-27 02:12:22] 2025-07-27 06:11:50,373 | INFO     | chi2: 0.053621035291270235
[2025-07-27 02:12:22] 2025-07-27 06:11:50,373 | INFO     | -- intersect: 99229666067.03337
[2025-07-27 02:12:22] 2025-07-27 06:11:50,374 | INFO     | current memory leak: -56.58 B/s (using 70 data points, chi2=0.05)
[2025-07-27 02:12:22] 2025-07-27 06:11:50,374 | INFO     | could have reported an average CPU frequency of 2148 MHz (6 samples)
[2025-07-27 02:12:22] 2025-07-27 06:11:50,374 | INFO     | ..............................
[2025-07-27 02:12:22] 2025-07-27 06:11:50,374 | INFO     | . Timing measurements:
[2025-07-27 02:12:22] 2025-07-27 06:11:50,374 | INFO     | . get job = 0 s
[2025-07-27 02:12:22] 2025-07-27 06:11:50,374 | INFO     | . initial setup = 2 s
[2025-07-27 02:12:22] 2025-07-27 06:11:50,375 | INFO     | . payload setup = 9 s
[2025-07-27 02:12:22] 2025-07-27 06:11:50,375 | INFO     | . stage-in = 0 s
[2025-07-27 02:12:22] 2025-07-27 06:11:50,375 | INFO     | . payload execution = 4665 s
[2025-07-27 02:12:22] 2025-07-27 06:11:50,375 | INFO     | . stage-out = 0 s
[2025-07-27 02:12:22] 2025-07-27 06:11:50,375 | INFO     | . log creation = 0 s
[2025-07-27 02:12:22] 2025-07-27 06:11:50,375 | INFO     | ..............................
[2025-07-27 02:12:22] 2025-07-27 06:11:50,452 | INFO     | 
[2025-07-27 02:12:22] 2025-07-27 06:11:50,452 | INFO     | job summary report
[2025-07-27 02:12:22] 2025-07-27 06:11:50,452 | INFO     | --------------------------------------------------
[2025-07-27 02:12:22] 2025-07-27 06:11:50,452 | INFO     | PanDA job id: 6745899304
[2025-07-27 02:12:22] 2025-07-27 06:11:50,452 | INFO     | task id: 45759361
[2025-07-27 02:12:22] 2025-07-27 06:11:50,453 | INFO     | errors: (none)
[2025-07-27 02:12:22] 2025-07-27 06:11:50,453 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 02:12:22] 2025-07-27 06:11:50,453 | INFO     | pilot state: finished 
[2025-07-27 02:12:22] 2025-07-27 06:11:50,453 | INFO     | transexitcode: 0
[2025-07-27 02:12:22] 2025-07-27 06:11:50,453 | INFO     | exeerrorcode: 0
[2025-07-27 02:12:22] 2025-07-27 06:11:50,454 | INFO     | exeerrordiag: 
[2025-07-27 02:12:22] 2025-07-27 06:11:50,454 | INFO     | exitcode: 0
[2025-07-27 02:12:22] 2025-07-27 06:11:50,454 | INFO     | exitmsg: OK
[2025-07-27 02:12:22] 2025-07-27 06:11:50,454 | INFO     | cpuconsumptiontime: 51132 s
[2025-07-27 02:12:22] 2025-07-27 06:11:50,454 | INFO     | nevents: 400
[2025-07-27 02:12:22] 2025-07-27 06:11:50,454 | INFO     | neventsw: 0
[2025-07-27 02:12:22] 2025-07-27 06:11:50,454 | INFO     | pid: 13119
[2025-07-27 02:12:22] 2025-07-27 06:11:50,455 | INFO     | pgrp: 13119
[2025-07-27 02:12:22] 2025-07-27 06:11:50,455 | INFO     | corecount: 12
[2025-07-27 02:12:22] 2025-07-27 06:11:50,455 | INFO     | event service: False
[2025-07-27 02:12:22] 2025-07-27 06:11:50,455 | INFO     | sizes: {0: 2397484, 5: 2397746, 11: 2397802, 4678: 2423957, 4679: 2432955, 4680: 2433011, 4689: 2433333}
[2025-07-27 02:12:22] 2025-07-27 06:11:50,455 | INFO     | --------------------------------------------------
[2025-07-27 02:12:22] 2025-07-27 06:11:50,455 | INFO     | 
[2025-07-27 02:12:22] 2025-07-27 06:11:50,455 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 02:12:22] 2025-07-27 06:11:50,479 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 02:12:22] 2025-07-27 06:11:50,479 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 02:12:22] 2025-07-27 06:11:50,479 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 02:12:22] 2025-07-27 06:11:50,479 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 02:12:22] 2025-07-27 06:11:50,479 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 02:12:22] 2025-07-27 06:11:50,480 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 02:12:22] 2025-07-27 06:11:50,480 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 02:12:22] 2025-07-27 06:11:50,480 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 02:12:22] 2025-07-27 06:11:50,480 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 02:12:22] 2025-07-27 06:11:50,480 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 02:12:22] 2025-07-27 06:11:50,480 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 02:12:22] 2025-07-27 06:11:50,480 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 02:12:22] 2025-07-27 06:11:50,481 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 02:12:22] 2025-07-27 06:11:50,481 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 02:12:22] 2025-07-27 06:11:50,481 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 02:12:22] 2025-07-27 06:11:50,481 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 02:12:22] 2025-07-27 06:11:50,481 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 02:12:22] 2025-07-27 06:11:50,481 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 02:12:22] 2025-07-27 06:11:50,481 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 02:12:22] 2025-07-27 06:11:50,482 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 02:12:22] 2025-07-27 06:11:50,482 | INFO     | job 6745899304 has completed (purged errors)
[2025-07-27 02:12:22] 2025-07-27 06:11:50,482 | INFO     | overall cleanup function is called
[2025-07-27 02:12:22] 2025-07-27 06:11:51,490 | INFO     | --- collectZombieJob: --- 10, [13119]
[2025-07-27 02:12:22] 2025-07-27 06:11:51,490 | INFO     | zombie collector waiting for pid 13119
[2025-07-27 02:12:22] 2025-07-27 06:11:51,496 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 02:12:22] 2025-07-27 06:11:51,497 | INFO     | collected zombie processes
[2025-07-27 02:12:22] 2025-07-27 06:11:51,497 | INFO     | will attempt to kill all subprocesses of pid=13119
[2025-07-27 02:12:22] 2025-07-27 06:11:51,585 | INFO     | process IDs to be killed: [13119] (in reverse order)
[2025-07-27 02:12:22] 2025-07-27 06:11:51,637 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 02:12:22] 2025-07-27 06:11:51,637 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 02:12:22] 2025-07-27 06:11:51,641 | INFO     | did not find any defunct processes belonging to 13119
[2025-07-27 02:12:22] 2025-07-27 06:11:51,644 | INFO     | did not find any defunct processes belonging to 13119
[2025-07-27 02:12:22] 2025-07-27 06:11:51,644 | INFO     | ready for new job
[2025-07-27 02:12:22] 2025-07-27 06:11:51,644 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 02:12:22] 2025-07-27 06:11:51,645 | INFO     | ***************************************
[2025-07-27 02:12:22] 2025-07-27 06:11:51,645 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 02:12:22] 2025-07-27 06:11:51,646 | INFO     | ***************************************
[2025-07-27 02:12:22] 2025-07-27 06:11:51,646 | INFO     | 
[2025-07-27 02:12:22] 2025-07-27 06:11:51,646 | INFO     | architecture information:
[2025-07-27 02:12:22] 2025-07-27 06:11:51,647 | INFO     | executing command: cat /etc/os-release
[2025-07-27 02:12:22] 2025-07-27 06:11:51,661 | INFO     | cat /etc/os-release:
[2025-07-27 02:12:22] NAME="CentOS Linux"
[2025-07-27 02:12:22] VERSION="7 (Core)"
[2025-07-27 02:12:22] ID="centos"
[2025-07-27 02:12:22] ID_LIKE="rhel fedora"
[2025-07-27 02:12:22] VERSION_ID="7"
[2025-07-27 02:12:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 02:12:22] ANSI_COLOR="0;31"
[2025-07-27 02:12:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 02:12:22] HOME_URL="https://www.centos.org/"
[2025-07-27 02:12:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 02:12:22] 
[2025-07-27 02:12:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 02:12:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 02:12:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 02:12:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 02:12:22] 
[2025-07-27 02:12:22] 2025-07-27 06:11:51,661 | INFO     | ***************************************
[2025-07-27 02:12:22] 2025-07-27 06:11:52,164 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 02:12:22] 2025-07-27 06:11:52,181 | INFO     | sufficient remaining disk space (18579718144 B)
[2025-07-27 02:12:22] 2025-07-27 06:11:52,181 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 02:12:22] 2025-07-27 06:11:52,182 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 02:12:22] 2025-07-27 06:11:52,182 | INFO     | update_server=False
[2025-07-27 02:12:22] 2025-07-27 06:11:52,182 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 02:12:22] 2025-07-27 06:11:52,182 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 02:12:22] 2025-07-27 06:11:52,376 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 02:12:22] 2025-07-27 06:11:52,377 | INFO     | aborting loop
[2025-07-27 02:12:22] 2025-07-27 06:11:52,673 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 02:12:22] 2025-07-27 06:11:52,698 | INFO     | all data control threads have been joined
[2025-07-27 02:12:22] 2025-07-27 06:11:52,918 | INFO     | all payload control threads have been joined
[2025-07-27 02:12:22] 2025-07-27 06:11:53,187 | INFO     | [job] retrieve thread has finished
[2025-07-27 02:12:22] 2025-07-27 06:11:53,188 | INFO     | [job] queue monitor thread has finished
[2025-07-27 02:12:22] 2025-07-27 06:11:53,206 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 02:12:22] 2025-07-27 06:11:53,382 | INFO     | [job] job monitor thread has finished
[2025-07-27 02:12:22] 2025-07-27 06:11:53,478 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 02:12:22] 2025-07-27 06:11:53,486 | INFO     | [data] copytool_in thread has finished
[2025-07-27 02:12:22] 2025-07-27 06:11:53,508 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 02:12:22] 2025-07-27 06:11:53,526 | INFO     | [payload] failed_post thread has finished
[2025-07-27 02:12:22] 2025-07-27 06:11:53,542 | INFO     | [payload] validate_post thread has finished
[2025-07-27 02:12:22] 2025-07-27 06:11:53,554 | INFO     | all job control threads have been joined
[2025-07-27 02:12:22] 2025-07-27 06:11:53,703 | INFO     | [data] control thread has finished
[2025-07-27 02:12:22] 2025-07-27 06:11:53,923 | INFO     | [payload] control thread has finished
[2025-07-27 02:12:22] 2025-07-27 06:11:54,166 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 02:12:22] 2025-07-27 06:11:54,469 | INFO     | [job] validate thread has finished
[2025-07-27 02:12:22] 2025-07-27 06:11:54,557 | INFO     | [job] control thread has finished
[2025-07-27 02:12:22] 2025-07-27 06:11:55,514 | INFO     | [data] copytool_out thread has finished
[2025-07-27 02:12:22] 2025-07-27 06:11:56,679 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 02:12:22] 2025-07-27 06:12:02,732 | INFO     | job.realtimelogging is not enabled
[2025-07-27 02:12:22] 2025-07-27 06:12:03,738 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 02:12:22] 2025-07-27 06:12:04,197 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139901781608256)>', '<ExcThread(monitor, started 139901043472128)>']
[2025-07-27 02:12:22] 2025-07-27 06:12:09,214 | INFO     | all workflow threads have been joined
[2025-07-27 02:12:22] 2025-07-27 06:12:09,214 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 02:12:22] 2025-07-27 06:12:09,215 | INFO     | traces error code: 0
[2025-07-27 02:12:22] 2025-07-27 06:12:09,215 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 02:12:22] 2025-07-27 06:12:22,431 | INFO     | PID=6707 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 02:12:22] 2025-07-27 06:12:22,432 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 02:12:22] 2025-07-27 06:12:22,432 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 02:12:22] 2025-07-27 06:12:22,432 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 02:12:22] 2025-07-27 06:12:22,432 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 02:12:22] 2025-07-27 06:12:22,432 | INFO     | [monitor] control thread has ended
[2025-07-27 02:12:22] 2025-07-27 06:12:22,511 [wrapper] ==== pilot stdout END ====
[2025-07-27 02:12:22] 2025-07-27 06:12:22,514 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 02:12:22] 2025-07-27 06:12:22,518 [wrapper] pilotpid: 6707
[2025-07-27 02:12:22] 2025-07-27 06:12:22,522 [wrapper] Pilot exit status: 0
[2025-07-27 02:12:22] 2025-07-27 06:12:22,539 [wrapper] pandaids: 6745899304
[2025-07-27 02:12:22] 2025-07-27 06:12:22,582 [wrapper] cleanup supervisor_pilot 15709 6708
[2025-07-27 02:12:22] 2025-07-27 06:12:22,586 [wrapper] Test setup, not cleaning
[2025-07-27 02:12:22] 2025-07-27 06:12:22,590 [wrapper] apfmon messages muted
[2025-07-27 02:12:22] 2025-07-27 06:12:22,594 [wrapper] ==== wrapper stdout END ====
[2025-07-27 02:12:22] 2025-07-27 06:12:22,598 [wrapper] ==== wrapper stderr END ====
[2025-07-27 02:12:22]  *** Error codes and diagnostics ***
[2025-07-27 02:12:22]     "exeErrorCode": 0,
[2025-07-27 02:12:22]     "exeErrorDiag": "",
[2025-07-27 02:12:22]     "pilotErrorCode": 0,
[2025-07-27 02:12:22]     "pilotErrorDiag": "",
[2025-07-27 02:12:22]  *** Listing of results directory ***
[2025-07-27 02:12:22] total 415768
[2025-07-27 02:12:22] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 19:40 pilot3.tar.gz
[2025-07-27 02:12:22] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 19:47 queuedata.json
[2025-07-27 02:12:22] -rwx------ 1 boincer umatlas     36292 Jul 26 19:48 runpilot2-wrapper.sh
[2025-07-27 02:12:22] -rw-r--r-- 1 boincer umatlas       100 Jul 27 00:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 02:12:22] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 00:53 run_atlas
[2025-07-27 02:12:22] -rw-r--r-- 1 boincer umatlas       105 Jul 27 00:53 job.xml
[2025-07-27 02:12:22] -rw-r--r-- 2 boincer umatlas 242696276 Jul 27 00:53 EVNT.45759358._000002.pool.root.1
[2025-07-27 02:12:22] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 00:53 start_atlas.sh
[2025-07-27 02:12:22] drwxrwx--x 2 boincer umatlas      4096 Jul 27 00:53 shared
[2025-07-27 02:12:22] -rw-r--r-- 2 boincer umatlas    542890 Jul 27 00:53 input.tar.gz
[2025-07-27 02:12:22] -rw-r--r-- 1 boincer umatlas         0 Jul 27 00:53 boinc_lockfile
[2025-07-27 02:12:22] -rw-r--r-- 1 boincer umatlas      2577 Jul 27 00:53 pandaJob.out
[2025-07-27 02:12:22] -rw------- 1 boincer umatlas    980125 Jul 27 00:53 agis_schedconf.cvmfs.json
[2025-07-27 02:12:22] -rw------- 1 boincer umatlas   1593052 Jul 27 00:53 agis_ddmendpoints.agis.ALL.json
[2025-07-27 02:12:22] drwx------ 4 boincer umatlas      4096 Jul 27 00:53 pilot3
[2025-07-27 02:12:22] -rw-r--r-- 1 boincer umatlas      5869 Jul 27 02:10 init_data.xml
[2025-07-27 02:12:22] -rw-r--r-- 1 boincer umatlas       529 Jul 27 02:11 boinc_task_state.xml
[2025-07-27 02:12:22] -rw------- 1 boincer umatlas 177514861 Jul 27 02:11 HITS.45759361._000046.pool.root.1
[2025-07-27 02:12:22] -rw------- 1 boincer umatlas        95 Jul 27 02:11 pilot_heartbeat.json
[2025-07-27 02:12:22] -rw------- 1 boincer umatlas      1047 Jul 27 02:11 memory_monitor_summary.json
[2025-07-27 02:12:22] -rw------- 1 boincer umatlas    374633 Jul 27 02:11 log.45759361._000046.job.log.tgz.1
[2025-07-27 02:12:22] -rw------- 1 boincer umatlas      7842 Jul 27 02:11 heartbeat.json
[2025-07-27 02:12:22] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 02:11 boinc_mmap_file
[2025-07-27 02:12:22] -rw-r--r-- 1 boincer umatlas        27 Jul 27 02:11 wrapper_checkpoint.txt
[2025-07-27 02:12:22] -rw------- 1 boincer umatlas       744 Jul 27 02:12 pilotlog.txt
[2025-07-27 02:12:22] -rw------- 1 boincer umatlas    451565 Jul 27 02:12 log.45759361._000046.job.log.1
[2025-07-27 02:12:22] -rw------- 1 boincer umatlas       357 Jul 27 02:12 output.list
[2025-07-27 02:12:22] -rw-r--r-- 1 boincer umatlas       620 Jul 27 02:12 runtime_log
[2025-07-27 02:12:22] -rw------- 1 boincer umatlas    849920 Jul 27 02:12 result.tar.gz
[2025-07-27 02:12:22] -rw-r--r-- 1 boincer umatlas      8662 Jul 27 02:12 runtime_log.err
[2025-07-27 02:12:22] -rw------- 1 boincer umatlas       659 Jul 27 02:12 hyBLDmvn3z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvVTLDmDWrzLn.diag
[2025-07-27 02:12:22] -rw-r--r-- 1 boincer umatlas     21911 Jul 27 02:12 stderr.txt
[2025-07-27 02:12:22] HITS file was successfully produced:
[2025-07-27 02:12:22] -rw------- 1 boincer umatlas 177514861 Jul 27 02:11 shared/HITS.pool.root.1
[2025-07-27 02:12:22]  *** Contents of shared directory: ***
[2025-07-27 02:12:22] total 411752
[2025-07-27 02:12:22] -rw-r--r-- 2 boincer umatlas 242696276 Jul 27 00:53 ATLAS.root_0
[2025-07-27 02:12:22] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 00:53 start_atlas.sh
[2025-07-27 02:12:22] -rw-r--r-- 2 boincer umatlas    542890 Jul 27 00:53 input.tar.gz
[2025-07-27 02:12:22] -rw------- 1 boincer umatlas 177514861 Jul 27 02:11 HITS.pool.root.1
[2025-07-27 02:12:22] -rw------- 1 boincer umatlas    849920 Jul 27 02:12 result.tar.gz
02:12:24 (2956): run_atlas exited; CPU time 51122.108170
02:12:24 (2956): called boinc_finish(0)

</stderr_txt>
]]>

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