Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:51:02 (15622): wrapper (7.7.26015): starting
00:51:02 (15622): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 00:51:02] Arguments: --nthreads 8
[2025-07-27 00:51:02] Threads: 8
[2025-07-27 00:51:02] Checking for CVMFS
[2025-07-27 00:51:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 00:51:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 00:51:02] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 00:51:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 00:51:03] 2.11.2.0 2934 687 63956 148800 2 59 13483843 20275201 1 130560 0 454914 99.991 21202 37393 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 00:51:03] CVMFS is ok
[2025-07-27 00:51:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 00:51:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 00:51:03] Further information can be found at the LHC@home message board.
[2025-07-27 00:51:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 00:51:03] Checking for apptainer binary...
[2025-07-27 00:51:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 00:51:03] Running /usr/bin/apptainer --version
[2025-07-27 00:51:03] apptainer version 1.3.2-1.el7
[2025-07-27 00:51:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 00:51:04] c-204-33.aglt2.org
[2025-07-27 00:51:04] apptainer works
[2025-07-27 00:51:04] Set ATHENA_PROC_NUMBER=8
[2025-07-27 00:51:04] Set ATHENA_CORE_NUMBER=8
[2025-07-27 00:51:04] Starting ATLAS job with PandaID=6745899297
[2025-07-27 00:51:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 03:19:49]  *** The last 200 lines of the pilot log: ***
[2025-07-27 03:19:49] 2025-07-27 07:19:11,908 | INFO     | monitor loop #657: job 0:6745899297 is in state 'finished'
[2025-07-27 03:19:49] 2025-07-27 07:19:11,909 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:19:49] 2025-07-27 07:19:14,412 | INFO     | monitor loop #658: job 0:6745899297 is in state 'finished'
[2025-07-27 03:19:49] 2025-07-27 07:19:14,412 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:19:49] 2025-07-27 07:19:16,623 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 03:19:49] 2025-07-27 07:19:16,627 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-07-27 03:19:49] 2025-07-27 07:19:16,629 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745899297/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 03:19:49] 2025-07-27 07:19:16,629 | INFO     | extracted standard info from prmon json
[2025-07-27 03:19:49] 2025-07-27 07:19:16,630 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 03:19:49] 2025-07-27 07:19:16,630 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 03:19:49] 2025-07-27 07:19:16,630 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 03:19:49] 2025-07-27 07:19:16,630 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 03:19:49] 2025-07-27 07:19:16,634 | INFO     | fitting pss+swap vs Time
[2025-07-27 03:19:49] 2025-07-27 07:19:16,634 | INFO     | sum of square deviations: 945282840.0
[2025-07-27 03:19:49] 2025-07-27 07:19:16,635 | INFO     | sum of deviations: 4605824764.000001
[2025-07-27 03:19:49] 2025-07-27 07:19:16,636 | INFO     | mean x: 1753596304.0
[2025-07-27 03:19:49] 2025-07-27 07:19:16,636 | INFO     | mean y: 2530586.2
[2025-07-27 03:19:49] 2025-07-27 07:19:16,636 | INFO     | -- intersect: -8541745202.221246
[2025-07-27 03:19:49] 2025-07-27 07:19:16,636 | INFO     | intersect: -8541745202.221246
[2025-07-27 03:19:49] 2025-07-27 07:19:16,637 | INFO     | chi2: 1.51230281039848
[2025-07-27 03:19:49] 2025-07-27 07:19:16,637 | INFO     | sum of square deviations: 850825255.0
[2025-07-27 03:19:49] 2025-07-27 07:19:16,638 | INFO     | sum of deviations: 4570809696.5
[2025-07-27 03:19:49] 2025-07-27 07:19:16,638 | INFO     | mean x: 1753596151.5
[2025-07-27 03:19:49] 2025-07-27 07:19:16,638 | INFO     | mean y: 2530531.2642857144
[2025-07-27 03:19:49] 2025-07-27 07:19:16,638 | INFO     | -- intersect: -9418151619.292332
[2025-07-27 03:19:49] 2025-07-27 07:19:16,638 | INFO     | intersect: -9418151619.292332
[2025-07-27 03:19:49] 2025-07-27 07:19:16,639 | INFO     | chi2: 1.5135727735852451
[2025-07-27 03:19:49] 2025-07-27 07:19:16,639 | INFO     | current chi2=1.5135727735852451 (change=-0.08397545637242942 %)
[2025-07-27 03:19:49] 2025-07-27 07:19:16,639 | INFO     | right removable region: 139
[2025-07-27 03:19:49] 2025-07-27 07:19:16,639 | INFO     | sum of square deviations: 850825255.0
[2025-07-27 03:19:49] 2025-07-27 07:19:16,640 | INFO     | sum of deviations: -16304606979.0
[2025-07-27 03:19:49] 2025-07-27 07:19:16,640 | INFO     | mean x: 1753596456.5
[2025-07-27 03:19:49] 2025-07-27 07:19:16,640 | INFO     | mean y: 2563786.9
[2025-07-27 03:19:49] 2025-07-27 07:19:16,640 | INFO     | -- intersect: 33607232730.347816
[2025-07-27 03:19:49] 2025-07-27 07:19:16,641 | INFO     | intersect: 33607232730.347816
[2025-07-27 03:19:49] 2025-07-27 07:19:16,641 | INFO     | chi2: 0.12110140239364892
[2025-07-27 03:19:49] 2025-07-27 07:19:16,641 | INFO     | current chi2=0.12110140239364892 (change=91.99225171301906 %)
[2025-07-27 03:19:49] 2025-07-27 07:19:16,641 | INFO     | sum of square deviations: 762879420.0
[2025-07-27 03:19:49] 2025-07-27 07:19:16,642 | INFO     | sum of deviations: -13873007838.0
[2025-07-27 03:19:49] 2025-07-27 07:19:16,642 | INFO     | mean x: 1753596609.0
[2025-07-27 03:19:49] 2025-07-27 07:19:16,642 | INFO     | mean y: 2559494.6666666665
[2025-07-27 03:19:49] 2025-07-27 07:19:16,642 | INFO     | -- intersect: 31891818614.210384
[2025-07-27 03:19:49] 2025-07-27 07:19:16,642 | INFO     | intersect: 31891818614.210384
[2025-07-27 03:19:49] 2025-07-27 07:19:16,643 | INFO     | chi2: 0.1095028150072096
[2025-07-27 03:19:49] 2025-07-27 07:19:16,643 | INFO     | current chi2=0.1095028150072096 (change=9.57758304791324 %)
[2025-07-27 03:19:49] 2025-07-27 07:19:16,643 | INFO     | left removable region: 20
[2025-07-27 03:19:49] 2025-07-27 07:19:16,643 | INFO     | sum of square deviations: 522502820.0
[2025-07-27 03:19:49] 2025-07-27 07:19:16,644 | INFO     | sum of deviations: -3981495009.999999
[2025-07-27 03:19:49] 2025-07-27 07:19:16,644 | INFO     | mean x: 1753596731.0
[2025-07-27 03:19:49] 2025-07-27 07:19:16,644 | INFO     | mean y: 2540990.050420168
[2025-07-27 03:19:49] 2025-07-27 07:19:16,644 | INFO     | -- intersect: 13365027022.238363
[2025-07-27 03:19:49] 2025-07-27 07:19:16,644 | INFO     | intersect: 13365027022.238363
[2025-07-27 03:19:49] 2025-07-27 07:19:16,644 | INFO     | chi2: 0.05507099158874068
[2025-07-27 03:19:49] 2025-07-27 07:19:16,645 | INFO     | -- intersect: 13365027022.238363
[2025-07-27 03:19:49] 2025-07-27 07:19:16,645 | INFO     | current memory leak: -7.62 B/s (using 119 data points, chi2=0.06)
[2025-07-27 03:19:49] 2025-07-27 07:19:16,645 | INFO     | could have reported an average CPU frequency of 1987 MHz (8 samples)
[2025-07-27 03:19:49] 2025-07-27 07:19:16,645 | INFO     | ..............................
[2025-07-27 03:19:49] 2025-07-27 07:19:16,645 | INFO     | . Timing measurements:
[2025-07-27 03:19:49] 2025-07-27 07:19:16,646 | INFO     | . get job = 0 s
[2025-07-27 03:19:49] 2025-07-27 07:19:16,646 | INFO     | . initial setup = 2 s
[2025-07-27 03:19:49] 2025-07-27 07:19:16,646 | INFO     | . payload setup = 10 s
[2025-07-27 03:19:49] 2025-07-27 07:19:16,646 | INFO     | . stage-in = 0 s
[2025-07-27 03:19:49] 2025-07-27 07:19:16,646 | INFO     | . payload execution = 8833 s
[2025-07-27 03:19:49] 2025-07-27 07:19:16,646 | INFO     | . stage-out = 0 s
[2025-07-27 03:19:49] 2025-07-27 07:19:16,646 | INFO     | . log creation = 0 s
[2025-07-27 03:19:49] 2025-07-27 07:19:16,646 | INFO     | ..............................
[2025-07-27 03:19:49] 2025-07-27 07:19:16,740 | INFO     | 
[2025-07-27 03:19:49] 2025-07-27 07:19:16,740 | INFO     | job summary report
[2025-07-27 03:19:49] 2025-07-27 07:19:16,740 | INFO     | --------------------------------------------------
[2025-07-27 03:19:49] 2025-07-27 07:19:16,740 | INFO     | PanDA job id: 6745899297
[2025-07-27 03:19:49] 2025-07-27 07:19:16,740 | INFO     | task id: 45759361
[2025-07-27 03:19:49] 2025-07-27 07:19:16,741 | INFO     | errors: (none)
[2025-07-27 03:19:49] 2025-07-27 07:19:16,741 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 03:19:49] 2025-07-27 07:19:16,741 | INFO     | pilot state: finished 
[2025-07-27 03:19:49] 2025-07-27 07:19:16,741 | INFO     | transexitcode: 0
[2025-07-27 03:19:49] 2025-07-27 07:19:16,741 | INFO     | exeerrorcode: 0
[2025-07-27 03:19:49] 2025-07-27 07:19:16,741 | INFO     | exeerrordiag: 
[2025-07-27 03:19:49] 2025-07-27 07:19:16,742 | INFO     | exitcode: 0
[2025-07-27 03:19:49] 2025-07-27 07:19:16,742 | INFO     | exitmsg: OK
[2025-07-27 03:19:49] 2025-07-27 07:19:16,742 | INFO     | cpuconsumptiontime: 66317 s
[2025-07-27 03:19:49] 2025-07-27 07:19:16,742 | INFO     | nevents: 400
[2025-07-27 03:19:49] 2025-07-27 07:19:16,742 | INFO     | neventsw: 0
[2025-07-27 03:19:49] 2025-07-27 07:19:16,742 | INFO     | pid: 25691
[2025-07-27 03:19:49] 2025-07-27 07:19:16,743 | INFO     | pgrp: 25691
[2025-07-27 03:19:49] 2025-07-27 07:19:16,743 | INFO     | corecount: 8
[2025-07-27 03:19:49] 2025-07-27 07:19:16,743 | INFO     | event service: False
[2025-07-27 03:19:49] 2025-07-27 07:19:16,743 | INFO     | sizes: {0: 2397484, 6: 2397746, 11: 2397774, 8848: 2425922, 8850: 2434920, 8853: 2434976, 8861: 2435298}
[2025-07-27 03:19:49] 2025-07-27 07:19:16,743 | INFO     | --------------------------------------------------
[2025-07-27 03:19:49] 2025-07-27 07:19:16,743 | INFO     | 
[2025-07-27 03:19:49] 2025-07-27 07:19:16,744 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 03:19:49] 2025-07-27 07:19:16,771 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 03:19:49] 2025-07-27 07:19:16,772 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 03:19:49] 2025-07-27 07:19:16,772 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 03:19:49] 2025-07-27 07:19:16,772 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 03:19:49] 2025-07-27 07:19:16,772 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 03:19:49] 2025-07-27 07:19:16,772 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 03:19:49] 2025-07-27 07:19:16,773 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 03:19:49] 2025-07-27 07:19:16,773 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 03:19:49] 2025-07-27 07:19:16,773 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 03:19:49] 2025-07-27 07:19:16,773 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 03:19:49] 2025-07-27 07:19:16,773 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 03:19:49] 2025-07-27 07:19:16,774 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 03:19:49] 2025-07-27 07:19:16,774 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 03:19:49] 2025-07-27 07:19:16,774 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 03:19:49] 2025-07-27 07:19:16,774 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 03:19:49] 2025-07-27 07:19:16,774 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 03:19:49] 2025-07-27 07:19:16,775 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 03:19:49] 2025-07-27 07:19:16,775 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 03:19:49] 2025-07-27 07:19:16,775 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 03:19:49] 2025-07-27 07:19:16,775 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 03:19:49] 2025-07-27 07:19:16,775 | INFO     | job 6745899297 has completed (purged errors)
[2025-07-27 03:19:49] 2025-07-27 07:19:16,776 | INFO     | overall cleanup function is called
[2025-07-27 03:19:49] 2025-07-27 07:19:17,784 | INFO     | --- collectZombieJob: --- 10, [25691]
[2025-07-27 03:19:49] 2025-07-27 07:19:17,784 | INFO     | zombie collector waiting for pid 25691
[2025-07-27 03:19:49] 2025-07-27 07:19:17,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 03:19:49] 2025-07-27 07:19:17,785 | INFO     | collected zombie processes
[2025-07-27 03:19:49] 2025-07-27 07:19:17,785 | INFO     | will attempt to kill all subprocesses of pid=25691
[2025-07-27 03:19:49] 2025-07-27 07:19:17,872 | INFO     | process IDs to be killed: [25691] (in reverse order)
[2025-07-27 03:19:49] 2025-07-27 07:19:17,930 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 03:19:49] 2025-07-27 07:19:17,931 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 03:19:49] 2025-07-27 07:19:17,935 | INFO     | did not find any defunct processes belonging to 25691
[2025-07-27 03:19:49] 2025-07-27 07:19:17,938 | INFO     | did not find any defunct processes belonging to 25691
[2025-07-27 03:19:49] 2025-07-27 07:19:17,939 | INFO     | ready for new job
[2025-07-27 03:19:49] 2025-07-27 07:19:17,939 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 03:19:49] 2025-07-27 07:19:17,941 | INFO     | ***************************************
[2025-07-27 03:19:49] 2025-07-27 07:19:17,941 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 03:19:49] 2025-07-27 07:19:17,941 | INFO     | ***************************************
[2025-07-27 03:19:49] 2025-07-27 07:19:17,941 | INFO     | 
[2025-07-27 03:19:49] 2025-07-27 07:19:17,942 | INFO     | architecture information:
[2025-07-27 03:19:49] 2025-07-27 07:19:17,942 | INFO     | executing command: cat /etc/os-release
[2025-07-27 03:19:49] 2025-07-27 07:19:17,960 | INFO     | cat /etc/os-release:
[2025-07-27 03:19:49] NAME="CentOS Linux"
[2025-07-27 03:19:49] VERSION="7 (Core)"
[2025-07-27 03:19:49] ID="centos"
[2025-07-27 03:19:49] ID_LIKE="rhel fedora"
[2025-07-27 03:19:49] VERSION_ID="7"
[2025-07-27 03:19:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 03:19:49] ANSI_COLOR="0;31"
[2025-07-27 03:19:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 03:19:49] HOME_URL="https://www.centos.org/"
[2025-07-27 03:19:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 03:19:49] 
[2025-07-27 03:19:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 03:19:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 03:19:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 03:19:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 03:19:49] 
[2025-07-27 03:19:49] 2025-07-27 07:19:17,961 | INFO     | ***************************************
[2025-07-27 03:19:49] 2025-07-27 07:19:18,464 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 03:19:49] 2025-07-27 07:19:18,484 | INFO     | sufficient remaining disk space (18578669568 B)
[2025-07-27 03:19:49] 2025-07-27 07:19:18,484 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 03:19:49] 2025-07-27 07:19:18,485 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 03:19:49] 2025-07-27 07:19:18,485 | INFO     | update_server=False
[2025-07-27 03:19:49] 2025-07-27 07:19:18,485 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 03:19:49] 2025-07-27 07:19:18,485 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 03:19:49] 2025-07-27 07:19:18,486 | INFO     | aborting loop
[2025-07-27 03:19:49] 2025-07-27 07:19:18,486 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 03:19:49] 2025-07-27 07:19:18,597 | INFO     | all job control threads have been joined
[2025-07-27 03:19:49] 2025-07-27 07:19:18,680 | INFO     | all payload control threads have been joined
[2025-07-27 03:19:49] 2025-07-27 07:19:18,785 | INFO     | all data control threads have been joined
[2025-07-27 03:19:49] 2025-07-27 07:19:19,139 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 03:19:49] 2025-07-27 07:19:19,488 | INFO     | [job] job monitor thread has finished
[2025-07-27 03:19:49] 2025-07-27 07:19:19,491 | INFO     | [job] retrieve thread has finished
[2025-07-27 03:19:49] 2025-07-27 07:19:19,491 | INFO     | [job] queue monitor thread has finished
[2025-07-27 03:19:49] 2025-07-27 07:19:19,603 | INFO     | [job] control thread has finished
[2025-07-27 03:19:49] 2025-07-27 07:19:19,616 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 03:19:49] 2025-07-27 07:19:19,686 | INFO     | [payload] control thread has finished
[2025-07-27 03:19:49] 2025-07-27 07:19:19,790 | INFO     | [data] control thread has finished
[2025-07-27 03:19:49] 2025-07-27 07:19:19,880 | INFO     | [payload] failed_post thread has finished
[2025-07-27 03:19:49] 2025-07-27 07:19:20,241 | INFO     | [job] validate thread has finished
[2025-07-27 03:19:49] 2025-07-27 07:19:20,446 | INFO     | [data] copytool_in thread has finished
[2025-07-27 03:19:49] 2025-07-27 07:19:20,448 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 03:19:49] 2025-07-27 07:19:20,553 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 03:19:49] 2025-07-27 07:19:20,628 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 03:19:49] 2025-07-27 07:19:20,851 | INFO     | [payload] validate_post thread has finished
[2025-07-27 03:19:49] 2025-07-27 07:19:20,988 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 03:19:49] 2025-07-27 07:19:21,145 | INFO     | [data] copytool_out thread has finished
[2025-07-27 03:19:49] 2025-07-27 07:19:23,622 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 03:19:49] 2025-07-27 07:19:24,270 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140184656353088)>', '<ExcThread(monitor, started 140183706007296)>']
[2025-07-27 03:19:49] 2025-07-27 07:19:29,298 | INFO     | all workflow threads have been joined
[2025-07-27 03:19:49] 2025-07-27 07:19:29,305 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 03:19:49] 2025-07-27 07:19:29,306 | INFO     | traces error code: 0
[2025-07-27 03:19:49] 2025-07-27 07:19:29,309 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 03:19:49] 2025-07-27 07:19:49,465 | INFO     | PID=19209 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 03:19:49] 2025-07-27 07:19:49,466 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 03:19:49] 2025-07-27 07:19:49,466 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 03:19:49] 2025-07-27 07:19:49,466 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 03:19:49] 2025-07-27 07:19:49,466 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 03:19:49] 2025-07-27 07:19:49,466 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 03:19:49] 2025-07-27 07:19:49,467 | INFO     | [monitor] control thread has ended
[2025-07-27 03:19:49] 2025-07-27 07:19:49,591 [wrapper] ==== pilot stdout END ====
[2025-07-27 03:19:49] 2025-07-27 07:19:49,595 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 03:19:49] 2025-07-27 07:19:49,600 [wrapper] pilotpid: 19209
[2025-07-27 03:19:49] 2025-07-27 07:19:49,605 [wrapper] Pilot exit status: 0
[2025-07-27 03:19:49] 2025-07-27 07:19:49,622 [wrapper] pandaids: 6745899297
[2025-07-27 03:19:49] 2025-07-27 07:19:49,665 [wrapper] cleanup supervisor_pilot 16569 19210
[2025-07-27 03:19:49] 2025-07-27 07:19:49,670 [wrapper] Test setup, not cleaning
[2025-07-27 03:19:49] 2025-07-27 07:19:49,674 [wrapper] apfmon messages muted
[2025-07-27 03:19:49] 2025-07-27 07:19:49,678 [wrapper] ==== wrapper stdout END ====
[2025-07-27 03:19:49] 2025-07-27 07:19:49,683 [wrapper] ==== wrapper stderr END ====
[2025-07-27 03:19:49]  *** Error codes and diagnostics ***
[2025-07-27 03:19:49]     "exeErrorCode": 0,
[2025-07-27 03:19:49]     "exeErrorDiag": "",
[2025-07-27 03:19:49]     "pilotErrorCode": 0,
[2025-07-27 03:19:49]     "pilotErrorDiag": "",
[2025-07-27 03:19:49]  *** Listing of results directory ***
[2025-07-27 03:19:49] total 416044
[2025-07-27 03:19:49] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 19:40 pilot3.tar.gz
[2025-07-27 03:19:49] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 19:47 queuedata.json
[2025-07-27 03:19:49] -rwx------ 1 boincer umatlas     36292 Jul 26 19:48 runpilot2-wrapper.sh
[2025-07-27 03:19:49] -rw-r--r-- 1 boincer umatlas       100 Jul 27 00:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 03:19:49] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 00:51 run_atlas
[2025-07-27 03:19:49] -rw-r--r-- 1 boincer umatlas       105 Jul 27 00:51 job.xml
[2025-07-27 03:19:49] -rw-r--r-- 2 boincer umatlas 242696276 Jul 27 00:51 EVNT.45759358._000002.pool.root.1
[2025-07-27 03:19:49] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 00:51 start_atlas.sh
[2025-07-27 03:19:49] drwxrwx--x 2 boincer umatlas      4096 Jul 27 00:51 shared
[2025-07-27 03:19:49] -rw-r--r-- 2 boincer umatlas    542897 Jul 27 00:51 input.tar.gz
[2025-07-27 03:19:49] -rw-r--r-- 1 boincer umatlas         0 Jul 27 00:51 boinc_lockfile
[2025-07-27 03:19:49] -rw-r--r-- 1 boincer umatlas      2577 Jul 27 00:51 pandaJob.out
[2025-07-27 03:19:49] -rw------- 1 boincer umatlas    980125 Jul 27 00:51 agis_schedconf.cvmfs.json
[2025-07-27 03:19:49] -rw------- 1 boincer umatlas   1593052 Jul 27 00:51 agis_ddmendpoints.agis.ALL.json
[2025-07-27 03:19:49] drwx------ 4 boincer umatlas      4096 Jul 27 00:51 pilot3
[2025-07-27 03:19:49] -rw-r--r-- 1 boincer umatlas      5824 Jul 27 03:12 init_data.xml
[2025-07-27 03:19:49] -rw-r--r-- 1 boincer umatlas       529 Jul 27 03:18 boinc_task_state.xml
[2025-07-27 03:19:49] -rw------- 1 boincer umatlas 177164055 Jul 27 03:18 HITS.45759361._000039.pool.root.1
[2025-07-27 03:19:49] -rw------- 1 boincer umatlas      1063 Jul 27 03:19 memory_monitor_summary.json
[2025-07-27 03:19:49] -rw------- 1 boincer umatlas    345542 Jul 27 03:19 log.45759361._000039.job.log.tgz.1
[2025-07-27 03:19:49] -rw------- 1 boincer umatlas      7832 Jul 27 03:19 heartbeat.json
[2025-07-27 03:19:49] -rw-r--r-- 1 boincer umatlas        27 Jul 27 03:19 wrapper_checkpoint.txt
[2025-07-27 03:19:49] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 03:19 boinc_mmap_file
[2025-07-27 03:19:49] -rw------- 1 boincer umatlas        95 Jul 27 03:19 pilot_heartbeat.json
[2025-07-27 03:19:49] -rw------- 1 boincer umatlas       815 Jul 27 03:19 pilotlog.txt
[2025-07-27 03:19:49] -rw------- 1 boincer umatlas    805098 Jul 27 03:19 log.45759361._000039.job.log.1
[2025-07-27 03:19:49] -rw------- 1 boincer umatlas       357 Jul 27 03:19 output.list
[2025-07-27 03:19:49] -rw-r--r-- 1 boincer umatlas       620 Jul 27 03:19 runtime_log
[2025-07-27 03:19:49] -rw------- 1 boincer umatlas   1167360 Jul 27 03:19 result.tar.gz
[2025-07-27 03:19:49] -rw-r--r-- 1 boincer umatlas      8660 Jul 27 03:19 runtime_log.err
[2025-07-27 03:19:49] -rw------- 1 boincer umatlas       660 Jul 27 03:19 CH2KDmvn3z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoVTLDm1lTjfn.diag
[2025-07-27 03:19:49] -rw-r--r-- 1 boincer umatlas     21083 Jul 27 03:19 stderr.txt
[2025-07-27 03:19:49] HITS file was successfully produced:
[2025-07-27 03:19:49] -rw------- 1 boincer umatlas 177164055 Jul 27 03:18 shared/HITS.pool.root.1
[2025-07-27 03:19:49]  *** Contents of shared directory: ***
[2025-07-27 03:19:49] total 411712
[2025-07-27 03:19:49] -rw-r--r-- 2 boincer umatlas 242696276 Jul 27 00:51 ATLAS.root_0
[2025-07-27 03:19:49] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 00:51 start_atlas.sh
[2025-07-27 03:19:49] -rw-r--r-- 2 boincer umatlas    542897 Jul 27 00:51 input.tar.gz
[2025-07-27 03:19:49] -rw------- 1 boincer umatlas 177164055 Jul 27 03:18 HITS.pool.root.1
[2025-07-27 03:19:49] -rw------- 1 boincer umatlas   1167360 Jul 27 03:19 result.tar.gz
03:19:51 (15622): run_atlas exited; CPU time 66324.576102
03:19:51 (15622): called boinc_finish(0)

</stderr_txt>
]]>

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