Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:28:28 (3100768): wrapper (7.7.26015): starting
12:28:28 (3100768): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 12:28:28] Arguments: --nthreads 12
[2025-07-27 12:28:28] Threads: 12
[2025-07-27 12:28:28] Checking for CVMFS
[2025-07-27 12:28:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 12:28:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 12:28:28] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 12:28:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 12:28:28] 2.13.1.0 95439 8554 101412 148809 0 57 2589132 4097025 0 130560 0 7075533 99.990 323464 6274 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-07-27 12:28:28] CVMFS is ok
[2025-07-27 12:28:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 12:28:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 12:28:28] Further information can be found at the LHC@home message board.
[2025-07-27 12:28:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 12:28:28] Checking for apptainer binary...
[2025-07-27 12:28:28] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-07-27 12:28:28] apptainer is not installed, using version from CVMFS
[2025-07-27 12:28:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 12:28:28] pckelar5.cern.ch
[2025-07-27 12:28:28] apptainer works
[2025-07-27 12:28:28] Set ATHENA_PROC_NUMBER=12
[2025-07-27 12:28:28] Set ATHENA_CORE_NUMBER=12
[2025-07-27 12:28:28] Starting ATLAS job with PandaID=6745899267
[2025-07-27 12:28:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 13:49:10]  *** The last 200 lines of the pilot log: ***
[2025-07-27 13:49:10]  is_altstaged=None
[2025-07-27 13:49:10]  is_tar=False
[2025-07-27 13:49:10]  lfn=log.45759361._000009.job.log.tgz.1
[2025-07-27 13:49:10]  mtime=0
[2025-07-27 13:49:10]  protocol_id=None
[2025-07-27 13:49:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 13:49:10]  replicas=None
[2025-07-27 13:49:10]  scope=mc23_13p6TeV
[2025-07-27 13:49:10]  status=None
[2025-07-27 13:49:10]  status_code=0
[2025-07-27 13:49:10]  storage_token=
[2025-07-27 13:49:10]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6745899267/log.45759361._000009.job.log.tgz.1
[2025-07-27 13:49:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/e2/log.45759361._000009.job.log.tgz.1
[2025-07-27 13:49:10]  workdir=None
[2025-07-27 13:49:10] ]
[2025-07-27 13:49:10] 2025-07-27 11:48:30,699 | INFO     | transferring file log.45759361._000009.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6745899267/log.45759361._000009.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-27 13:49:10] 2025-07-27 11:48:30,699 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6745899267/log.45759361._000009.job.log.tgz.1 /var/lib/boinc/slots/0/log.45759361._000009.job
[2025-07-27 13:49:10] 2025-07-27 11:48:30,716 | INFO     | adding to output.list: log.45759361._000009.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/e2/log.45759361._000009.job.log.tg
[2025-07-27 13:49:10] 2025-07-27 11:48:30,717 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 13:49:10] 2025-07-27 11:48:30,717 | INFO     | summary of transferred files:
[2025-07-27 13:49:10] 2025-07-27 11:48:30,717 | INFO     |  -- lfn=log.45759361._000009.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 13:49:10] 2025-07-27 11:48:30,717 | INFO     | stage-out finished correctly
[2025-07-27 13:49:10] 2025-07-27 11:48:31,018 | INFO     | monitor loop #359: job 0:6745899267 is in state 'finished'
[2025-07-27 13:49:10] 2025-07-27 11:48:31,019 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:49:10] 2025-07-27 11:48:33,522 | INFO     | monitor loop #360: job 0:6745899267 is in state 'finished'
[2025-07-27 13:49:10] 2025-07-27 11:48:33,522 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:49:10] 2025-07-27 11:48:33,963 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 13:49:10] 2025-07-27 11:48:34,028 | INFO     | job 6745899267 has state=finished
[2025-07-27 13:49:10] 2025-07-27 11:48:34,028 | INFO     | preparing for final server update for job 6745899267 in state='finished'
[2025-07-27 13:49:10] 2025-07-27 11:48:34,029 | INFO     | this job has now completed (state=finished)
[2025-07-27 13:49:10] 2025-07-27 11:48:34,029 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 13:49:10] 2025-07-27 11:48:34,029 | INFO     | log transfer has been attempted: DONE
[2025-07-27 13:49:10] 2025-07-27 11:48:34,029 | INFO     | job 6745899267 has finished - writing final server update
[2025-07-27 13:49:10] 2025-07-27 11:48:34,029 | INFO     | total number of processed events: 400 (read)
[2025-07-27 13:49:10] 2025-07-27 11:48:34,030 | INFO     | executing command: lscpu
[2025-07-27 13:49:10] 2025-07-27 11:48:34,050 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 13:49:10] 2025-07-27 11:48:36,025 | INFO     | monitor loop #361: job 0:6745899267 is in state 'finished'
[2025-07-27 13:49:10] 2025-07-27 11:48:36,025 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 13:49:10] 2025-07-27 11:48:38,198 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 13:49:10] 2025-07-27 11:48:38,200 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2483.4773333333333
[2025-07-27 13:49:10] 2025-07-27 11:48:38,202 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6745899267/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 13:49:10] 2025-07-27 11:48:38,203 | INFO     | extracted standard info from prmon json
[2025-07-27 13:49:10] 2025-07-27 11:48:38,203 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 13:49:10] 2025-07-27 11:48:38,203 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 13:49:10] 2025-07-27 11:48:38,203 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 13:49:10] 2025-07-27 11:48:38,203 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 13:49:10] 2025-07-27 11:48:38,205 | INFO     | fitting pss+swap vs Time
[2025-07-27 13:49:10] 2025-07-27 11:48:38,205 | INFO     | sum of square deviations: 115715658.0
[2025-07-27 13:49:10] 2025-07-27 11:48:38,205 | INFO     | sum of deviations: -14593512540.500006
[2025-07-27 13:49:10] 2025-07-27 11:48:38,205 | INFO     | mean x: 1753614608.5
[2025-07-27 13:49:10] 2025-07-27 11:48:38,205 | INFO     | mean y: 2920804.7916666665
[2025-07-27 13:49:10] 2025-07-27 11:48:38,205 | INFO     | -- intersect: 221160517128.9534
[2025-07-27 13:49:10] 2025-07-27 11:48:38,205 | INFO     | intersect: 221160517128.9534
[2025-07-27 13:49:10] 2025-07-27 11:48:38,206 | INFO     | chi2: 0.10280225877633285
[2025-07-27 13:49:10] 2025-07-27 11:48:38,206 | INFO     | -- intersect: 221160517128.9534
[2025-07-27 13:49:10] 2025-07-27 11:48:38,206 | INFO     | current memory leak: -126.12 B/s (using 72 data points, chi2=0.10)
[2025-07-27 13:49:10] 2025-07-27 11:48:38,206 | INFO     | could have reported an average CPU frequency of 2595 MHz (6 samples)
[2025-07-27 13:49:10] 2025-07-27 11:48:38,206 | INFO     | ..............................
[2025-07-27 13:49:10] 2025-07-27 11:48:38,206 | INFO     | . Timing measurements:
[2025-07-27 13:49:10] 2025-07-27 11:48:38,206 | INFO     | . get job = 0 s
[2025-07-27 13:49:10] 2025-07-27 11:48:38,206 | INFO     | . initial setup = 1 s
[2025-07-27 13:49:10] 2025-07-27 11:48:38,207 | INFO     | . payload setup = 5 s
[2025-07-27 13:49:10] 2025-07-27 11:48:38,207 | INFO     | . stage-in = 0 s
[2025-07-27 13:49:10] 2025-07-27 11:48:38,207 | INFO     | . payload execution = 4771 s
[2025-07-27 13:49:10] 2025-07-27 11:48:38,207 | INFO     | . stage-out = 0 s
[2025-07-27 13:49:10] 2025-07-27 11:48:38,207 | INFO     | . log creation = 0 s
[2025-07-27 13:49:10] 2025-07-27 11:48:38,207 | INFO     | ..............................
[2025-07-27 13:49:10] 2025-07-27 11:48:38,277 | INFO     | 
[2025-07-27 13:49:10] 2025-07-27 11:48:38,277 | INFO     | job summary report
[2025-07-27 13:49:10] 2025-07-27 11:48:38,277 | INFO     | --------------------------------------------------
[2025-07-27 13:49:10] 2025-07-27 11:48:38,278 | INFO     | PanDA job id: 6745899267
[2025-07-27 13:49:10] 2025-07-27 11:48:38,278 | INFO     | task id: 45759361
[2025-07-27 13:49:10] 2025-07-27 11:48:38,278 | INFO     | errors: (none)
[2025-07-27 13:49:10] 2025-07-27 11:48:38,278 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 13:49:10] 2025-07-27 11:48:38,278 | INFO     | pilot state: finished 
[2025-07-27 13:49:10] 2025-07-27 11:48:38,278 | INFO     | transexitcode: 0
[2025-07-27 13:49:10] 2025-07-27 11:48:38,278 | INFO     | exeerrorcode: 0
[2025-07-27 13:49:10] 2025-07-27 11:48:38,278 | INFO     | exeerrordiag: 
[2025-07-27 13:49:10] 2025-07-27 11:48:38,278 | INFO     | exitcode: 0
[2025-07-27 13:49:10] 2025-07-27 11:48:38,278 | INFO     | exitmsg: OK
[2025-07-27 13:49:10] 2025-07-27 11:48:38,278 | INFO     | cpuconsumptiontime: 51864 s
[2025-07-27 13:49:10] 2025-07-27 11:48:38,278 | INFO     | nevents: 400
[2025-07-27 13:49:10] 2025-07-27 11:48:38,279 | INFO     | neventsw: 0
[2025-07-27 13:49:10] 2025-07-27 11:48:38,279 | INFO     | pid: 3111575
[2025-07-27 13:49:10] 2025-07-27 11:48:38,279 | INFO     | pgrp: 3111575
[2025-07-27 13:49:10] 2025-07-27 11:48:38,279 | INFO     | corecount: 12
[2025-07-27 13:49:10] 2025-07-27 11:48:38,279 | INFO     | event service: False
[2025-07-27 13:49:10] 2025-07-27 11:48:38,279 | INFO     | sizes: {0: 2397364, 1: 2397506, 3: 2397768, 11: 2397796, 4781: 2433080, 4785: 2433080, 4789: 2433402}
[2025-07-27 13:49:10] 2025-07-27 11:48:38,279 | INFO     | --------------------------------------------------
[2025-07-27 13:49:10] 2025-07-27 11:48:38,279 | INFO     | 
[2025-07-27 13:49:10] 2025-07-27 11:48:38,279 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-27 13:49:10] 2025-07-27 11:48:38,295 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 13:49:10] 2025-07-27 11:48:38,295 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 13:49:10] 2025-07-27 11:48:38,295 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 13:49:10] 2025-07-27 11:48:38,296 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 13:49:10] 2025-07-27 11:48:38,296 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 13:49:10] 2025-07-27 11:48:38,296 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 13:49:10] 2025-07-27 11:48:38,296 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 13:49:10] 2025-07-27 11:48:38,296 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 13:49:10] 2025-07-27 11:48:38,296 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 13:49:10] 2025-07-27 11:48:38,296 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 13:49:10] 2025-07-27 11:48:38,296 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 13:49:10] 2025-07-27 11:48:38,296 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 13:49:10] 2025-07-27 11:48:38,296 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 13:49:10] 2025-07-27 11:48:38,296 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 13:49:10] 2025-07-27 11:48:38,297 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 13:49:10] 2025-07-27 11:48:38,297 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 13:49:10] 2025-07-27 11:48:38,297 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 13:49:10] 2025-07-27 11:48:38,297 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 13:49:10] 2025-07-27 11:48:38,297 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 13:49:10] 2025-07-27 11:48:38,297 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 13:49:10] 2025-07-27 11:48:38,297 | INFO     | job 6745899267 has completed (purged errors)
[2025-07-27 13:49:10] 2025-07-27 11:48:38,297 | INFO     | overall cleanup function is called
[2025-07-27 13:49:10] 2025-07-27 11:48:39,304 | INFO     | --- collectZombieJob: --- 10, [3111575]
[2025-07-27 13:49:10] 2025-07-27 11:48:39,304 | INFO     | zombie collector waiting for pid 3111575
[2025-07-27 13:49:10] 2025-07-27 11:48:39,304 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 13:49:10] 2025-07-27 11:48:39,304 | INFO     | collected zombie processes
[2025-07-27 13:49:10] 2025-07-27 11:48:39,304 | INFO     | will attempt to kill all subprocesses of pid=3111575
[2025-07-27 13:49:10] 2025-07-27 11:48:39,379 | INFO     | process IDs to be killed: [3111575] (in reverse order)
[2025-07-27 13:49:10] 2025-07-27 11:48:39,411 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 13:49:10] 2025-07-27 11:48:39,411 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 13:49:10] 2025-07-27 11:48:39,413 | INFO     | did not find any defunct processes belonging to 3111575
[2025-07-27 13:49:10] 2025-07-27 11:48:39,415 | INFO     | did not find any defunct processes belonging to 3111575
[2025-07-27 13:49:10] 2025-07-27 11:48:39,415 | INFO     | ready for new job
[2025-07-27 13:49:10] 2025-07-27 11:48:39,416 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 13:49:10] 2025-07-27 11:48:39,417 | INFO     | ***************************************
[2025-07-27 13:49:10] 2025-07-27 11:48:39,417 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 13:49:10] 2025-07-27 11:48:39,417 | INFO     | ***************************************
[2025-07-27 13:49:10] 2025-07-27 11:48:39,417 | INFO     | 
[2025-07-27 13:49:10] 2025-07-27 11:48:39,417 | INFO     | architecture information:
[2025-07-27 13:49:10] 2025-07-27 11:48:39,418 | INFO     | executing command: cat /etc/os-release
[2025-07-27 13:49:10] 2025-07-27 11:48:39,426 | INFO     | cat /etc/os-release:
[2025-07-27 13:49:10] NAME="CentOS Linux"
[2025-07-27 13:49:10] VERSION="7 (Core)"
[2025-07-27 13:49:10] ID="centos"
[2025-07-27 13:49:10] ID_LIKE="rhel fedora"
[2025-07-27 13:49:10] VERSION_ID="7"
[2025-07-27 13:49:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 13:49:10] ANSI_COLOR="0;31"
[2025-07-27 13:49:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 13:49:10] HOME_URL="https://www.centos.org/"
[2025-07-27 13:49:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 13:49:10] 
[2025-07-27 13:49:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 13:49:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 13:49:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 13:49:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 13:49:10] 
[2025-07-27 13:49:10] 2025-07-27 11:48:39,427 | INFO     | ***************************************
[2025-07-27 13:49:10] 2025-07-27 11:48:39,929 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-27 13:49:10] 2025-07-27 11:48:39,942 | INFO     | sufficient remaining disk space (1817273434112 B)
[2025-07-27 13:49:10] 2025-07-27 11:48:39,943 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 13:49:10] 2025-07-27 11:48:39,943 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 13:49:10] 2025-07-27 11:48:39,943 | INFO     | update_server=False
[2025-07-27 13:49:10] 2025-07-27 11:48:39,943 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 13:49:10] 2025-07-27 11:48:39,943 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:49:10] 2025-07-27 11:48:39,944 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 13:49:10] 2025-07-27 11:48:39,944 | INFO     | aborting loop
[2025-07-27 13:49:10] 2025-07-27 11:48:40,034 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 13:49:10] 2025-07-27 11:48:40,128 | INFO     | all job control threads have been joined
[2025-07-27 13:49:10] 2025-07-27 11:48:40,224 | INFO     | all payload control threads have been joined
[2025-07-27 13:49:10] 2025-07-27 11:48:40,948 | INFO     | [job] retrieve thread has finished
[2025-07-27 13:49:10] 2025-07-27 11:48:40,949 | INFO     | [job] queue monitor thread has finished
[2025-07-27 13:49:10] 2025-07-27 11:48:40,949 | INFO     | [job] job monitor thread has finished
[2025-07-27 13:49:10] 2025-07-27 11:48:40,968 | INFO     | all data control threads have been joined
[2025-07-27 13:49:10] 2025-07-27 11:48:41,134 | INFO     | [job] control thread has finished
[2025-07-27 13:49:10] 2025-07-27 11:48:41,229 | INFO     | [payload] control thread has finished
[2025-07-27 13:49:10] 2025-07-27 11:48:41,299 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 13:49:10] 2025-07-27 11:48:41,414 | INFO     | [payload] failed_post thread has finished
[2025-07-27 13:49:10] 2025-07-27 11:48:41,626 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 13:49:10] 2025-07-27 11:48:41,799 | INFO     | [job] validate thread has finished
[2025-07-27 13:49:10] 2025-07-27 11:48:41,838 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 13:49:10] 2025-07-27 11:48:41,875 | INFO     | [data] copytool_in thread has finished
[2025-07-27 13:49:10] 2025-07-27 11:48:41,973 | INFO     | [data] control thread has finished
[2025-07-27 13:49:10] 2025-07-27 11:48:42,078 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 13:49:10] 2025-07-27 11:48:42,203 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 13:49:10] 2025-07-27 11:48:42,386 | INFO     | [payload] validate_post thread has finished
[2025-07-27 13:49:10] 2025-07-27 11:48:43,305 | INFO     | [data] copytool_out thread has finished
[2025-07-27 13:49:10] 2025-07-27 11:48:44,040 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 13:49:10] 2025-07-27 11:48:45,394 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140364432963392)>', '<ExcThread(monitor, started 140363138324224)>']
[2025-07-27 13:49:10] 2025-07-27 11:48:50,419 | INFO     | all workflow threads have been joined
[2025-07-27 13:49:10] 2025-07-27 11:48:50,420 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 13:49:10] 2025-07-27 11:48:50,420 | INFO     | traces error code: 0
[2025-07-27 13:49:10] 2025-07-27 11:48:50,420 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 13:49:10] 2025-07-27 11:49:09,940 | INFO     | PID=3104453 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 13:49:10] 2025-07-27 11:49:09,940 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 13:49:10] 2025-07-27 11:49:09,940 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 13:49:10] 2025-07-27 11:49:09,940 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 13:49:10] 2025-07-27 11:49:09,940 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 13:49:10] 2025-07-27 11:49:09,940 | INFO     | [monitor] control thread has ended
[2025-07-27 13:49:10] 2025-07-27 11:49:10,020 [wrapper] ==== pilot stdout END ====
[2025-07-27 13:49:10] 2025-07-27 11:49:10,023 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 13:49:10] 2025-07-27 11:49:10,026 [wrapper] pilotpid: 3104453
[2025-07-27 13:49:10] 2025-07-27 11:49:10,028 [wrapper] Pilot exit status: 0
[2025-07-27 13:49:10] 2025-07-27 11:49:10,037 [wrapper] pandaids: 6745899267
[2025-07-27 13:49:10] 2025-07-27 11:49:10,056 [wrapper] cleanup supervisor_pilot 3127446 3104454
[2025-07-27 13:49:10] 2025-07-27 11:49:10,058 [wrapper] Test setup, not cleaning
[2025-07-27 13:49:10] 2025-07-27 11:49:10,060 [wrapper] apfmon messages muted
[2025-07-27 13:49:10] 2025-07-27 11:49:10,062 [wrapper] ==== wrapper stdout END ====
[2025-07-27 13:49:10] 2025-07-27 11:49:10,064 [wrapper] ==== wrapper stderr END ====
[2025-07-27 13:49:10]  *** Error codes and diagnostics ***
[2025-07-27 13:49:10]     "exeErrorCode": 0,
[2025-07-27 13:49:10]     "exeErrorDiag": "",
[2025-07-27 13:49:10]     "pilotErrorCode": 0,
[2025-07-27 13:49:10]     "pilotErrorDiag": "",
[2025-07-27 13:49:10]  *** Listing of results directory ***
[2025-07-27 13:49:10] total 405612
[2025-07-27 13:49:10] -rw-r--r-- 1 boinc boinc    530466 Jul 27 01:40 pilot3.tar.gz
[2025-07-27 13:49:10] -rw-r--r-- 1 boinc boinc      5112 Jul 27 01:41 queuedata.json
[2025-07-27 13:49:10] -rwx------ 1 boinc boinc     36292 Jul 27 01:45 runpilot2-wrapper.sh
[2025-07-27 13:49:10] -rw-r--r-- 1 boinc boinc       100 Jul 27 12:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 13:49:10] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 12:28 run_atlas
[2025-07-27 13:49:10] -rw-r--r-- 1 boinc boinc       105 Jul 27 12:28 job.xml
[2025-07-27 13:49:10] -rw-r--r-- 1 boinc boinc      6294 Jul 27 12:28 init_data.xml
[2025-07-27 13:49:10] -rw-r--r-- 2 boinc boinc 242603095 Jul 27 12:28 EVNT.45759358._000001.pool.root.1
[2025-07-27 13:49:10] -rw-r--r-- 2 boinc boinc     15095 Jul 27 12:28 start_atlas.sh
[2025-07-27 13:49:10] drwxrwx--x 2 boinc boinc        68 Jul 27 12:28 shared
[2025-07-27 13:49:10] -rw-r--r-- 2 boinc boinc    542896 Jul 27 12:28 input.tar.gz
[2025-07-27 13:49:10] -rw-r--r-- 1 boinc boinc         0 Jul 27 12:28 boinc_lockfile
[2025-07-27 13:49:10] -rw-r--r-- 1 boinc boinc      2574 Jul 27 12:28 pandaJob.out
[2025-07-27 13:49:10] -rw------- 1 boinc boinc    980117 Jul 27 12:28 agis_schedconf.cvmfs.json
[2025-07-27 13:49:10] -rw------- 1 boinc boinc   1593052 Jul 27 12:28 agis_ddmendpoints.agis.ALL.json
[2025-07-27 13:49:10] drwx------ 4 boinc boinc      4096 Jul 27 12:28 pilot3
[2025-07-27 13:49:10] -rw------- 1 boinc boinc 167240253 Jul 27 13:48 HITS.45759361._000009.pool.root.1
[2025-07-27 13:49:10] -rw-r--r-- 1 boinc boinc       529 Jul 27 13:48 boinc_task_state.xml
[2025-07-27 13:49:10] -rw------- 1 boinc boinc      1016 Jul 27 13:48 memory_monitor_summary.json
[2025-07-27 13:49:10] -rw------- 1 boinc boinc    358032 Jul 27 13:48 log.45759361._000009.job.log.tgz.1
[2025-07-27 13:49:10] -rw------- 1 boinc boinc        95 Jul 27 13:48 pilot_heartbeat.json
[2025-07-27 13:49:10] -rw------- 1 boinc boinc      7779 Jul 27 13:48 heartbeat.json
[2025-07-27 13:49:10] -rw-r--r-- 1 boinc boinc      8192 Jul 27 13:48 boinc_mmap_file
[2025-07-27 13:49:10] -rw-r--r-- 1 boinc boinc        27 Jul 27 13:48 wrapper_checkpoint.txt
[2025-07-27 13:49:10] -rw------- 1 boinc boinc       747 Jul 27 13:49 pilotlog.txt
[2025-07-27 13:49:10] -rw------- 1 boinc boinc    460868 Jul 27 13:49 log.45759361._000009.job.log.1
[2025-07-27 13:49:10] -rw------- 1 boinc boinc       357 Jul 27 13:49 output.list
[2025-07-27 13:49:10] -rw-r--r-- 1 boinc boinc       620 Jul 27 13:49 runtime_log
[2025-07-27 13:49:10] -rw------- 1 boinc boinc    839680 Jul 27 13:49 result.tar.gz
[2025-07-27 13:49:10] -rw------- 1 boinc boinc       655 Jul 27 13:49 yPDODmtk3z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPVTLDmUuCTrm.diag
[2025-07-27 13:49:10] -rw-r--r-- 1 boinc boinc      8684 Jul 27 13:49 runtime_log.err
[2025-07-27 13:49:10] -rw-r--r-- 1 boinc boinc     21634 Jul 27 13:49 stderr.txt
[2025-07-27 13:49:10] HITS file was successfully produced:
[2025-07-27 13:49:10] -rw------- 1 boinc boinc 167240253 Jul 27 13:48 shared/HITS.pool.root.1
[2025-07-27 13:49:10]  *** Contents of shared directory: ***
[2025-07-27 13:49:10] total 401612
[2025-07-27 13:49:10] -rw-r--r-- 2 boinc boinc 242603095 Jul 27 12:28 ATLAS.root_0
[2025-07-27 13:49:10] -rw-r--r-- 2 boinc boinc     15095 Jul 27 12:28 start_atlas.sh
[2025-07-27 13:49:10] -rw-r--r-- 2 boinc boinc    542896 Jul 27 12:28 input.tar.gz
[2025-07-27 13:49:10] -rw------- 1 boinc boinc 167240253 Jul 27 13:48 HITS.pool.root.1
[2025-07-27 13:49:10] -rw------- 1 boinc boinc    839680 Jul 27 13:49 result.tar.gz
13:49:11 (3100768): run_atlas exited; CPU time 51896.921907
13:49:11 (3100768): called boinc_finish(0)

</stderr_txt>
]]>

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