Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:19:49 (823516): wrapper (7.7.26015): starting
02:19:49 (823516): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 02:19:49] Arguments: --nthreads 12
[2025-07-27 02:19:49] Threads: 12
[2025-07-27 02:19:49] Checking for CVMFS
[2025-07-27 02:19:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 02:19:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 02:19:49] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 02:19:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 02:19:50] 2.12.6.0 1263230 17996 331112 148803 2 104 21939618 32935936 7311 16776704 0 35291752 99.606 56708240 29261 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 02:19:50] CVMFS is ok
[2025-07-27 02:19:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 02:19:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 02:19:50] Further information can be found at the LHC@home message board.
[2025-07-27 02:19:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 02:19:50] Checking for apptainer binary...
[2025-07-27 02:19:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 02:19:50] Running /usr/bin/apptainer --version
[2025-07-27 02:19:50] apptainer version 1.4.1-1.el9
[2025-07-27 02:19:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 02:19:50] c6-5-7-2.aglt2.org
[2025-07-27 02:19:50] apptainer works
[2025-07-27 02:19:50] Set ATHENA_PROC_NUMBER=12
[2025-07-27 02:19:50] Set ATHENA_CORE_NUMBER=12
[2025-07-27 02:19:50] Starting ATLAS job with PandaID=6745899276
[2025-07-27 02:19:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 03:45:01]  *** The last 200 lines of the pilot log: ***
[2025-07-27 03:45:01]  replicas=None
[2025-07-27 03:45:01]  scope=mc23_13p6TeV
[2025-07-27 03:45:01]  status=None
[2025-07-27 03:45:01]  status_code=0
[2025-07-27 03:45:01]  storage_token=
[2025-07-27 03:45:01]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745899276/log.45759361._000018.job.log.tgz.1
[2025-07-27 03:45:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f6/9b/log.45759361._000018.job.log.tgz.1
[2025-07-27 03:45:01]  workdir=None
[2025-07-27 03:45:01] ]
[2025-07-27 03:45:01] 2025-07-27 07:44:20,069 | INFO     | transferring file log.45759361._000018.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745899276/log.45759361._000018.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 03:45:01] 2025-07-27 07:44:20,069 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745899276/log.45759361._000018.job.log.tgz.1 /tmp/boinchome/slots/0/log.45759361._000018.job
[2025-07-27 03:45:01] 2025-07-27 07:44:20,090 | INFO     | adding to output.list: log.45759361._000018.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f6/9b/log.45759361._000018.job.log.tg
[2025-07-27 03:45:01] 2025-07-27 07:44:20,090 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 03:45:01] 2025-07-27 07:44:20,090 | INFO     | summary of transferred files:
[2025-07-27 03:45:01] 2025-07-27 07:44:20,090 | INFO     |  -- lfn=log.45759361._000018.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 03:45:01] 2025-07-27 07:44:20,091 | INFO     | stage-out finished correctly
[2025-07-27 03:45:01] 2025-07-27 07:44:20,161 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 03:45:01] 2025-07-27 07:44:20,193 | INFO     | monitor loop #371: job 0:6745899276 is in state 'finished'
[2025-07-27 03:45:01] 2025-07-27 07:44:20,193 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:45:01] 2025-07-27 07:44:20,552 | INFO     | PID=827279 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 03:45:01] 2025-07-27 07:44:20,552 | INFO     | .. there are 9 such processes running
[2025-07-27 03:45:01] 2025-07-27 07:44:22,701 | INFO     | monitor loop #372: job 0:6745899276 is in state 'finished'
[2025-07-27 03:45:01] 2025-07-27 07:44:22,702 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:45:01] 2025-07-27 07:44:23,001 | INFO     | job 6745899276 has state=finished
[2025-07-27 03:45:01] 2025-07-27 07:44:23,001 | INFO     | preparing for final server update for job 6745899276 in state='finished'
[2025-07-27 03:45:01] 2025-07-27 07:44:23,002 | INFO     | this job has now completed (state=finished)
[2025-07-27 03:45:01] 2025-07-27 07:44:23,002 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 03:45:01] 2025-07-27 07:44:23,002 | INFO     | log transfer has been attempted: DONE
[2025-07-27 03:45:01] 2025-07-27 07:44:23,002 | INFO     | job 6745899276 has finished - writing final server update
[2025-07-27 03:45:01] 2025-07-27 07:44:23,003 | INFO     | total number of processed events: 400 (read)
[2025-07-27 03:45:01] 2025-07-27 07:44:23,003 | INFO     | executing command: lscpu
[2025-07-27 03:45:01] 2025-07-27 07:44:23,066 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 03:45:01] 2025-07-27 07:44:25,205 | INFO     | monitor loop #373: job 0:6745899276 is in state 'finished'
[2025-07-27 03:45:01] 2025-07-27 07:44:25,205 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:45:01] 2025-07-27 07:44:27,707 | INFO     | monitor loop #374: job 0:6745899276 is in state 'finished'
[2025-07-27 03:45:01] 2025-07-27 07:44:27,708 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:45:01] 2025-07-27 07:44:28,201 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-27 03:45:01] 2025-07-27 07:44:28,209 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2860.143071428572
[2025-07-27 03:45:01] 2025-07-27 07:44:28,219 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745899276/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 03:45:01] 2025-07-27 07:44:28,220 | INFO     | extracted standard info from prmon json
[2025-07-27 03:45:01] 2025-07-27 07:44:28,220 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 03:45:01] 2025-07-27 07:44:28,220 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 03:45:01] 2025-07-27 07:44:28,221 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 03:45:01] 2025-07-27 07:44:28,221 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 03:45:01] 2025-07-27 07:44:28,223 | INFO     | fitting pss+swap vs Time
[2025-07-27 03:45:01] 2025-07-27 07:44:28,224 | INFO     | sum of square deviations: 136095575.0
[2025-07-27 03:45:01] 2025-07-27 07:44:28,224 | INFO     | sum of deviations: -15041012261.5
[2025-07-27 03:45:01] 2025-07-27 07:44:28,224 | INFO     | mean x: 1753599826.5
[2025-07-27 03:45:01] 2025-07-27 07:44:28,225 | INFO     | mean y: 2630247.2763157897
[2025-07-27 03:45:01] 2025-07-27 07:44:28,225 | INFO     | -- intersect: 193806995247.02573
[2025-07-27 03:45:01] 2025-07-27 07:44:28,225 | INFO     | intersect: 193806995247.02573
[2025-07-27 03:45:01] 2025-07-27 07:44:28,225 | INFO     | chi2: 0.16082955404247756
[2025-07-27 03:45:01] 2025-07-27 07:44:28,225 | INFO     | -- intersect: 193806995247.02573
[2025-07-27 03:45:01] 2025-07-27 07:44:28,225 | INFO     | current memory leak: -110.52 B/s (using 76 data points, chi2=0.16)
[2025-07-27 03:45:01] 2025-07-27 07:44:28,226 | INFO     | could have reported an average CPU frequency of 2767 MHz (6 samples)
[2025-07-27 03:45:01] 2025-07-27 07:44:28,226 | INFO     | ..............................
[2025-07-27 03:45:01] 2025-07-27 07:44:28,226 | INFO     | . Timing measurements:
[2025-07-27 03:45:01] 2025-07-27 07:44:28,226 | INFO     | . get job = 0 s
[2025-07-27 03:45:01] 2025-07-27 07:44:28,226 | INFO     | . initial setup = 3 s
[2025-07-27 03:45:01] 2025-07-27 07:44:28,226 | INFO     | . payload setup = 8 s
[2025-07-27 03:45:01] 2025-07-27 07:44:28,226 | INFO     | . stage-in = 0 s
[2025-07-27 03:45:01] 2025-07-27 07:44:28,226 | INFO     | . payload execution = 5026 s
[2025-07-27 03:45:01] 2025-07-27 07:44:28,226 | INFO     | . stage-out = 0 s
[2025-07-27 03:45:01] 2025-07-27 07:44:28,227 | INFO     | . log creation = 0 s
[2025-07-27 03:45:01] 2025-07-27 07:44:28,227 | INFO     | ..............................
[2025-07-27 03:45:01] 2025-07-27 07:44:28,349 | INFO     | 
[2025-07-27 03:45:01] 2025-07-27 07:44:28,350 | INFO     | job summary report
[2025-07-27 03:45:01] 2025-07-27 07:44:28,350 | INFO     | --------------------------------------------------
[2025-07-27 03:45:01] 2025-07-27 07:44:28,350 | INFO     | PanDA job id: 6745899276
[2025-07-27 03:45:01] 2025-07-27 07:44:28,350 | INFO     | task id: 45759361
[2025-07-27 03:45:01] 2025-07-27 07:44:28,350 | INFO     | errors: (none)
[2025-07-27 03:45:01] 2025-07-27 07:44:28,350 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 03:45:01] 2025-07-27 07:44:28,350 | INFO     | pilot state: finished 
[2025-07-27 03:45:01] 2025-07-27 07:44:28,350 | INFO     | transexitcode: 0
[2025-07-27 03:45:01] 2025-07-27 07:44:28,351 | INFO     | exeerrorcode: 0
[2025-07-27 03:45:01] 2025-07-27 07:44:28,351 | INFO     | exeerrordiag: 
[2025-07-27 03:45:01] 2025-07-27 07:44:28,351 | INFO     | exitcode: 0
[2025-07-27 03:45:01] 2025-07-27 07:44:28,351 | INFO     | exitmsg: OK
[2025-07-27 03:45:01] 2025-07-27 07:44:28,351 | INFO     | cpuconsumptiontime: 51084 s
[2025-07-27 03:45:01] 2025-07-27 07:44:28,351 | INFO     | nevents: 400
[2025-07-27 03:45:01] 2025-07-27 07:44:28,351 | INFO     | neventsw: 0
[2025-07-27 03:45:01] 2025-07-27 07:44:28,351 | INFO     | pid: 835837
[2025-07-27 03:45:01] 2025-07-27 07:44:28,351 | INFO     | pgrp: 835837
[2025-07-27 03:45:01] 2025-07-27 07:44:28,351 | INFO     | corecount: 12
[2025-07-27 03:45:01] 2025-07-27 07:44:28,352 | INFO     | event service: False
[2025-07-27 03:45:01] 2025-07-27 07:44:28,352 | INFO     | sizes: {0: 2397255, 1: 2397510, 6: 2397772, 12: 2397800, 5037: 2424009, 5039: 2433191, 5047: 2433329}
[2025-07-27 03:45:01] 2025-07-27 07:44:28,352 | INFO     | --------------------------------------------------
[2025-07-27 03:45:01] 2025-07-27 07:44:28,352 | INFO     | 
[2025-07-27 03:45:01] 2025-07-27 07:44:28,352 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 03:45:01] 2025-07-27 07:44:28,377 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 03:45:01] 2025-07-27 07:44:28,377 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 03:45:01] 2025-07-27 07:44:28,377 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 03:45:01] 2025-07-27 07:44:28,378 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 03:45:01] 2025-07-27 07:44:28,378 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 03:45:01] 2025-07-27 07:44:28,378 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 03:45:01] 2025-07-27 07:44:28,378 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 03:45:01] 2025-07-27 07:44:28,378 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 03:45:01] 2025-07-27 07:44:28,378 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 03:45:01] 2025-07-27 07:44:28,378 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 03:45:01] 2025-07-27 07:44:28,378 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 03:45:01] 2025-07-27 07:44:28,378 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 03:45:01] 2025-07-27 07:44:28,378 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 03:45:01] 2025-07-27 07:44:28,378 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 03:45:01] 2025-07-27 07:44:28,378 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 03:45:01] 2025-07-27 07:44:28,378 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 03:45:01] 2025-07-27 07:44:28,378 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 03:45:01] 2025-07-27 07:44:28,379 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 03:45:01] 2025-07-27 07:44:28,379 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 03:45:01] 2025-07-27 07:44:28,379 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 03:45:01] 2025-07-27 07:44:28,379 | INFO     | job 6745899276 has completed (purged errors)
[2025-07-27 03:45:01] 2025-07-27 07:44:28,379 | INFO     | overall cleanup function is called
[2025-07-27 03:45:01] 2025-07-27 07:44:29,386 | INFO     | --- collectZombieJob: --- 10, [835837]
[2025-07-27 03:45:01] 2025-07-27 07:44:29,387 | INFO     | zombie collector waiting for pid 835837
[2025-07-27 03:45:01] 2025-07-27 07:44:29,387 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 03:45:01] 2025-07-27 07:44:29,387 | INFO     | collected zombie processes
[2025-07-27 03:45:01] 2025-07-27 07:44:29,387 | INFO     | will attempt to kill all subprocesses of pid=835837
[2025-07-27 03:45:01] 2025-07-27 07:44:29,656 | INFO     | process IDs to be killed: [835837] (in reverse order)
[2025-07-27 03:45:01] 2025-07-27 07:44:29,762 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 03:45:01] 2025-07-27 07:44:29,763 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 03:45:01] 2025-07-27 07:44:29,773 | INFO     | did not find any defunct processes belonging to 835837
[2025-07-27 03:45:01] 2025-07-27 07:44:29,784 | INFO     | did not find any defunct processes belonging to 835837
[2025-07-27 03:45:01] 2025-07-27 07:44:29,785 | INFO     | ready for new job
[2025-07-27 03:45:01] 2025-07-27 07:44:29,785 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 03:45:01] 2025-07-27 07:44:29,787 | INFO     | ***************************************
[2025-07-27 03:45:01] 2025-07-27 07:44:29,787 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 03:45:01] 2025-07-27 07:44:29,787 | INFO     | ***************************************
[2025-07-27 03:45:01] 2025-07-27 07:44:29,787 | INFO     | 
[2025-07-27 03:45:01] 2025-07-27 07:44:29,803 | INFO     | architecture information:
[2025-07-27 03:45:01] 2025-07-27 07:44:29,804 | INFO     | executing command: cat /etc/os-release
[2025-07-27 03:45:01] 2025-07-27 07:44:29,821 | INFO     | cat /etc/os-release:
[2025-07-27 03:45:01] NAME="CentOS Linux"
[2025-07-27 03:45:01] VERSION="7 (Core)"
[2025-07-27 03:45:01] ID="centos"
[2025-07-27 03:45:01] ID_LIKE="rhel fedora"
[2025-07-27 03:45:01] VERSION_ID="7"
[2025-07-27 03:45:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 03:45:01] ANSI_COLOR="0;31"
[2025-07-27 03:45:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 03:45:01] HOME_URL="https://www.centos.org/"
[2025-07-27 03:45:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 03:45:01] 
[2025-07-27 03:45:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 03:45:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 03:45:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 03:45:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 03:45:01] 
[2025-07-27 03:45:01] 2025-07-27 07:44:29,821 | INFO     | ***************************************
[2025-07-27 03:45:01] 2025-07-27 07:44:30,324 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 03:45:01] 2025-07-27 07:44:30,344 | INFO     | sufficient remaining disk space (76290195456 B)
[2025-07-27 03:45:01] 2025-07-27 07:44:30,345 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 03:45:01] 2025-07-27 07:44:30,345 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 03:45:01] 2025-07-27 07:44:30,345 | INFO     | update_server=False
[2025-07-27 03:45:01] 2025-07-27 07:44:30,345 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 03:45:01] 2025-07-27 07:44:30,672 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 03:45:01] 2025-07-27 07:44:30,726 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 03:45:01] 2025-07-27 07:44:31,014 | INFO     | all data control threads have been joined
[2025-07-27 03:45:01] 2025-07-27 07:44:31,216 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 03:45:01] 2025-07-27 07:44:31,217 | INFO     | aborting loop
[2025-07-27 03:45:01] 2025-07-27 07:44:31,350 | INFO     | [job] retrieve thread has finished
[2025-07-27 03:45:01] 2025-07-27 07:44:31,581 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 03:45:01] 2025-07-27 07:44:31,719 | INFO     | all job control threads have been joined
[2025-07-27 03:45:01] 2025-07-27 07:44:31,832 | INFO     | all payload control threads have been joined
[2025-07-27 03:45:01] 2025-07-27 07:44:31,947 | INFO     | [data] copytool_in thread has finished
[2025-07-27 03:45:01] 2025-07-27 07:44:32,020 | INFO     | [data] control thread has finished
[2025-07-27 03:45:01] 2025-07-27 07:44:32,222 | INFO     | [job] job monitor thread has finished
[2025-07-27 03:45:01] 2025-07-27 07:44:32,285 | INFO     | [payload] validate_post thread has finished
[2025-07-27 03:45:01] 2025-07-27 07:44:32,521 | INFO     | [job] validate thread has finished
[2025-07-27 03:45:01] 2025-07-27 07:44:32,677 | INFO     | [data] copytool_out thread has finished
[2025-07-27 03:45:01] 2025-07-27 07:44:32,724 | INFO     | [job] control thread has finished
[2025-07-27 03:45:01] 2025-07-27 07:44:32,807 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 03:45:01] 2025-07-27 07:44:32,822 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 03:45:01] 2025-07-27 07:44:32,837 | INFO     | [payload] control thread has finished
[2025-07-27 03:45:01] 2025-07-27 07:44:32,930 | INFO     | [payload] failed_post thread has finished
[2025-07-27 03:45:01] 2025-07-27 07:44:33,343 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 03:45:01] 2025-07-27 07:44:34,348 | INFO     | [job] queue monitor thread has finished
[2025-07-27 03:45:01] 2025-07-27 07:44:34,733 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 03:45:01] 2025-07-27 07:44:40,656 | INFO     | job.realtimelogging is not enabled
[2025-07-27 03:45:01] 2025-07-27 07:44:41,662 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 03:45:01] 2025-07-27 07:44:42,553 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139760705972032)>', '<ExcThread(monitor, started 139760332936960)>']
[2025-07-27 03:45:01] 2025-07-27 07:44:47,577 | INFO     | all workflow threads have been joined
[2025-07-27 03:45:01] 2025-07-27 07:44:47,578 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 03:45:01] 2025-07-27 07:44:47,578 | INFO     | traces error code: 0
[2025-07-27 03:45:01] 2025-07-27 07:44:47,578 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 03:45:01] 2025-07-27 07:45:01,018 | INFO     | PID=827279 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 03:45:01] 2025-07-27 07:45:01,018 | INFO     | .. there are 9 such processes running
[2025-07-27 03:45:01] 2025-07-27 07:45:01,020 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 03:45:01] 2025-07-27 07:45:01,020 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 03:45:01] 2025-07-27 07:45:01,020 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 03:45:01] 2025-07-27 07:45:01,020 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 03:45:01] 2025-07-27 07:45:01,020 | INFO     | [monitor] control thread has ended
[2025-07-27 03:45:01] 2025-07-27 07:45:01,238 [wrapper] ==== pilot stdout END ====
[2025-07-27 03:45:01] 2025-07-27 07:45:01,243 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 03:45:01] 2025-07-27 07:45:01,247 [wrapper] pilotpid: 827279
[2025-07-27 03:45:01] 2025-07-27 07:45:01,251 [wrapper] Pilot exit status: 0
[2025-07-27 03:45:01] 2025-07-27 07:45:01,267 [wrapper] pandaids: 6745899276
[2025-07-27 03:45:01] 2025-07-27 07:45:01,338 [wrapper] cleanup supervisor_pilot 1120209 827280
[2025-07-27 03:45:01] 2025-07-27 07:45:01,344 [wrapper] Test setup, not cleaning
[2025-07-27 03:45:01] 2025-07-27 07:45:01,350 [wrapper] apfmon messages muted
[2025-07-27 03:45:01] 2025-07-27 07:45:01,356 [wrapper] ==== wrapper stdout END ====
[2025-07-27 03:45:01] 2025-07-27 07:45:01,362 [wrapper] ==== wrapper stderr END ====
[2025-07-27 03:45:01]  *** Error codes and diagnostics ***
[2025-07-27 03:45:01]     "exeErrorCode": 0,
[2025-07-27 03:45:01]     "exeErrorDiag": "",
[2025-07-27 03:45:01]     "pilotErrorCode": 0,
[2025-07-27 03:45:01]     "pilotErrorDiag": "",
[2025-07-27 03:45:01]  *** Listing of results directory ***
[2025-07-27 03:45:01] total 413256
[2025-07-27 03:45:01] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 19:40 pilot3.tar.gz
[2025-07-27 03:45:01] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 19:41 queuedata.json
[2025-07-27 03:45:01] -rwx------. 1 boincer umatlas     36292 Jul 26 19:45 runpilot2-wrapper.sh
[2025-07-27 03:45:01] -rw-r--r--. 1 boincer umatlas       100 Jul 27 02:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 03:45:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 02:19 run_atlas
[2025-07-27 03:45:01] -rw-r--r--. 1 boincer umatlas       105 Jul 27 02:19 job.xml
[2025-07-27 03:45:01] -rw-r--r--. 2 boincer umatlas 242603095 Jul 27 02:19 EVNT.45759358._000001.pool.root.1
[2025-07-27 03:45:01] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 02:19 start_atlas.sh
[2025-07-27 03:45:01] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 02:19 shared
[2025-07-27 03:45:01] -rw-r--r--. 2 boincer umatlas    542899 Jul 27 02:19 input.tar.gz
[2025-07-27 03:45:01] -rw-r--r--. 1 boincer umatlas         0 Jul 27 02:19 boinc_lockfile
[2025-07-27 03:45:01] -rw-r--r--. 1 boincer umatlas      2576 Jul 27 02:19 pandaJob.out
[2025-07-27 03:45:01] -rw-------. 1 boincer umatlas    980125 Jul 27 02:20 agis_schedconf.cvmfs.json
[2025-07-27 03:45:01] -rw-------. 1 boincer umatlas   1593052 Jul 27 02:20 agis_ddmendpoints.agis.ALL.json
[2025-07-27 03:45:01] drwx------. 4 boincer umatlas      4096 Jul 27 02:20 pilot3
[2025-07-27 03:45:01] -rw-r--r--. 1 boincer umatlas      6841 Jul 27 03:38 init_data.xml
[2025-07-27 03:45:01] -rw-------. 1 boincer umatlas 174952125 Jul 27 03:43 HITS.45759361._000018.pool.root.1
[2025-07-27 03:45:01] -rw-r--r--. 1 boincer umatlas       529 Jul 27 03:43 boinc_task_state.xml
[2025-07-27 03:45:01] -rw-------. 1 boincer umatlas      1034 Jul 27 03:44 memory_monitor_summary.json
[2025-07-27 03:45:01] -rw-------. 1 boincer umatlas    378120 Jul 27 03:44 log.45759361._000018.job.log.tgz.1
[2025-07-27 03:45:01] -rw-------. 1 boincer umatlas      7808 Jul 27 03:44 heartbeat.json
[2025-07-27 03:45:01] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 03:45 boinc_mmap_file
[2025-07-27 03:45:01] -rw-------. 1 boincer umatlas       821 Jul 27 03:45 pilotlog.txt
[2025-07-27 03:45:01] -rw-------. 1 boincer umatlas        95 Jul 27 03:45 pilot_heartbeat.json
[2025-07-27 03:45:01] -rw-r--r--. 1 boincer umatlas        27 Jul 27 03:45 wrapper_checkpoint.txt
[2025-07-27 03:45:01] -rw-------. 1 boincer umatlas    494191 Jul 27 03:45 log.45759361._000018.job.log.1
[2025-07-27 03:45:01] -rw-------. 1 boincer umatlas       357 Jul 27 03:45 output.list
[2025-07-27 03:45:01] -rw-r--r--. 1 boincer umatlas       620 Jul 27 03:45 runtime_log
[2025-07-27 03:45:01] -rw-------. 1 boincer umatlas    890880 Jul 27 03:45 result.tar.gz
[2025-07-27 03:45:01] -rw-------. 1 boincer umatlas       653 Jul 27 03:45 wwMODmtk3z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYVTLDmOigXmm.diag
[2025-07-27 03:45:01] -rw-r--r--. 1 boincer umatlas      8662 Jul 27 03:45 runtime_log.err
[2025-07-27 03:45:01] -rw-r--r--. 1 boincer umatlas     21941 Jul 27 03:45 stderr.txt
[2025-07-27 03:45:01] HITS file was successfully produced:
[2025-07-27 03:45:01] -rw-------. 1 boincer umatlas 174952125 Jul 27 03:43 shared/HITS.pool.root.1
[2025-07-27 03:45:01]  *** Contents of shared directory: ***
[2025-07-27 03:45:01] total 409196
[2025-07-27 03:45:01] -rw-r--r--. 2 boincer umatlas 242603095 Jul 27 02:19 ATLAS.root_0
[2025-07-27 03:45:01] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 02:19 start_atlas.sh
[2025-07-27 03:45:01] -rw-r--r--. 2 boincer umatlas    542899 Jul 27 02:19 input.tar.gz
[2025-07-27 03:45:01] -rw-------. 1 boincer umatlas 174952125 Jul 27 03:43 HITS.pool.root.1
[2025-07-27 03:45:01] -rw-------. 1 boincer umatlas    890880 Jul 27 03:45 result.tar.gz
03:45:03 (823516): run_atlas exited; CPU time 51103.101662
03:45:03 (823516): called boinc_finish(0)

</stderr_txt>
]]>

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