Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:33:23 (454447): wrapper (7.7.26015): starting
00:33:23 (454447): wrapper: running run_atlas (--nthreads 10)
[2025-07-27 00:33:23] Arguments: --nthreads 10
[2025-07-27 00:33:23] Threads: 10
[2025-07-27 00:33:23] Checking for CVMFS
[2025-07-27 00:33:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 00:33:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 00:33:23] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 00:33:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 00:33:23] 2.13.0.0 2500898 17907 284884 148800 2 71 23845032 32935937 7991 16776704 1 54943499 99.559 77996398 23238 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 00:33:23] CVMFS is ok
[2025-07-27 00:33:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 00:33:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 00:33:23] Further information can be found at the LHC@home message board.
[2025-07-27 00:33:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 00:33:23] Checking for apptainer binary...
[2025-07-27 00:33:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 00:33:23] Running /usr/bin/apptainer --version
[2025-07-27 00:33:23] apptainer version 1.4.1-1.el9
[2025-07-27 00:33:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 00:33:24] c-4-40.aglt2.org
[2025-07-27 00:33:24] apptainer works
[2025-07-27 00:33:24] Set ATHENA_PROC_NUMBER=10
[2025-07-27 00:33:24] Set ATHENA_CORE_NUMBER=10
[2025-07-27 00:33:24] Starting ATLAS job with PandaID=6745867295
[2025-07-27 00:33:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 02:53:47]  *** The last 200 lines of the pilot log: ***
[2025-07-27 02:53:47] 2025-07-27 06:53:12,522 | INFO     | PID=458462 has CPU usage=12.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 02:53:47] 2025-07-27 06:53:12,522 | INFO     | .. there are 11 such processes running
[2025-07-27 02:53:47] 2025-07-27 06:53:13,568 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 02:53:47] 2025-07-27 06:53:13,587 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2679.88955
[2025-07-27 02:53:47] 2025-07-27 06:53:13,606 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745867295/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 02:53:47] 2025-07-27 06:53:13,607 | INFO     | extracted standard info from prmon json
[2025-07-27 02:53:47] 2025-07-27 06:53:13,607 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 02:53:47] 2025-07-27 06:53:13,607 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 02:53:47] 2025-07-27 06:53:13,607 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 02:53:47] 2025-07-27 06:53:13,607 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 02:53:47] 2025-07-27 06:53:13,610 | INFO     | fitting pss+swap vs Time
[2025-07-27 02:53:47] 2025-07-27 06:53:13,611 | INFO     | sum of square deviations: 797301857.7664247
[2025-07-27 02:53:47] 2025-07-27 06:53:13,612 | INFO     | sum of deviations: -13211966169.59124
[2025-07-27 02:53:47] 2025-07-27 06:53:13,612 | INFO     | mean x: 1753594993.0948906
[2025-07-27 02:53:47] 2025-07-27 06:53:13,612 | INFO     | mean y: 2380031.583941606
[2025-07-27 02:53:47] 2025-07-27 06:53:13,612 | INFO     | -- intersect: 29060932320.4733
[2025-07-27 02:53:47] 2025-07-27 06:53:13,612 | INFO     | intersect: 29060932320.4733
[2025-07-27 02:53:47] 2025-07-27 06:53:13,613 | INFO     | chi2: 2.065881886102175
[2025-07-27 02:53:47] 2025-07-27 06:53:13,613 | INFO     | sum of square deviations: 713155407.7196949
[2025-07-27 02:53:47] 2025-07-27 06:53:13,614 | INFO     | sum of deviations: -11652530606.939394
[2025-07-27 02:53:47] 2025-07-27 06:53:13,614 | INFO     | mean x: 1753594840.5984848
[2025-07-27 02:53:47] 2025-07-27 06:53:13,614 | INFO     | mean y: 2382840.303030303
[2025-07-27 02:53:47] 2025-07-27 06:53:13,614 | INFO     | -- intersect: 28655068259.29427
[2025-07-27 02:53:47] 2025-07-27 06:53:13,614 | INFO     | intersect: 28655068259.29427
[2025-07-27 02:53:47] 2025-07-27 06:53:13,614 | INFO     | chi2: 2.06515398803329
[2025-07-27 02:53:47] 2025-07-27 06:53:13,614 | INFO     | current chi2=2.06515398803329 (change=0.03523425389330111 %)
[2025-07-27 02:53:47] 2025-07-27 06:53:13,615 | INFO     | right removable region: 131
[2025-07-27 02:53:47] 2025-07-27 06:53:13,615 | INFO     | sum of square deviations: 713147477.7196949
[2025-07-27 02:53:47] 2025-07-27 06:53:13,615 | INFO     | sum of deviations: -35389577568.37121
[2025-07-27 02:53:47] 2025-07-27 06:53:13,616 | INFO     | mean x: 1753595145.5984848
[2025-07-27 02:53:47] 2025-07-27 06:53:13,616 | INFO     | mean y: 2419740.143939394
[2025-07-27 02:53:47] 2025-07-27 06:53:13,616 | INFO     | -- intersect: 87023678831.05708
[2025-07-27 02:53:47] 2025-07-27 06:53:13,616 | INFO     | intersect: 87023678831.05708
[2025-07-27 02:53:47] 2025-07-27 06:53:13,616 | INFO     | chi2: 0.4123895355092659
[2025-07-27 02:53:47] 2025-07-27 06:53:13,616 | INFO     | current chi2=0.4123895355092659 (change=80.03808744906775 %)
[2025-07-27 02:53:47] 2025-07-27 06:53:13,617 | INFO     | sum of square deviations: 635132747.6692923
[2025-07-27 02:53:47] 2025-07-27 06:53:13,617 | INFO     | sum of deviations: -35839833695.68502
[2025-07-27 02:53:47] 2025-07-27 06:53:13,617 | INFO     | mean x: 1753595298.1023622
[2025-07-27 02:53:47] 2025-07-27 06:53:13,618 | INFO     | mean y: 2420446.283464567
[2025-07-27 02:53:47] 2025-07-27 06:53:13,618 | INFO     | -- intersect: 98955850393.2597
[2025-07-27 02:53:47] 2025-07-27 06:53:13,618 | INFO     | intersect: 98955850393.2597
[2025-07-27 02:53:47] 2025-07-27 06:53:13,618 | INFO     | chi2: 0.3382494099465807
[2025-07-27 02:53:47] 2025-07-27 06:53:13,618 | INFO     | current chi2=0.3382494099465807 (change=17.978178197739293 %)
[2025-07-27 02:53:47] 2025-07-27 06:53:13,618 | INFO     | left removable region: 20
[2025-07-27 02:53:47] 2025-07-27 06:53:13,619 | INFO     | sum of square deviations: 424044687.47747797
[2025-07-27 02:53:47] 2025-07-27 06:53:13,619 | INFO     | sum of deviations: -23160474101.45945
[2025-07-27 02:53:47] 2025-07-27 06:53:13,619 | INFO     | mean x: 1753595420.1171172
[2025-07-27 02:53:47] 2025-07-27 06:53:13,619 | INFO     | mean y: 2400851.189189189
[2025-07-27 02:53:47] 2025-07-27 06:53:13,620 | INFO     | -- intersect: 95780281134.6617
[2025-07-27 02:53:47] 2025-07-27 06:53:13,620 | INFO     | intersect: 95780281134.6617
[2025-07-27 02:53:47] 2025-07-27 06:53:13,620 | INFO     | chi2: 0.3115859831462416
[2025-07-27 02:53:47] 2025-07-27 06:53:13,620 | INFO     | -- intersect: 95780281134.6617
[2025-07-27 02:53:47] 2025-07-27 06:53:13,620 | INFO     | current memory leak: -54.62 B/s (using 111 data points, chi2=0.31)
[2025-07-27 02:53:47] 2025-07-27 06:53:13,621 | INFO     | could have reported an average CPU frequency of 2682 MHz (8 samples)
[2025-07-27 02:53:47] 2025-07-27 06:53:13,621 | INFO     | ..............................
[2025-07-27 02:53:47] 2025-07-27 06:53:13,621 | INFO     | . Timing measurements:
[2025-07-27 02:53:47] 2025-07-27 06:53:13,621 | INFO     | . get job = 0 s
[2025-07-27 02:53:47] 2025-07-27 06:53:13,621 | INFO     | . initial setup = 3 s
[2025-07-27 02:53:47] 2025-07-27 06:53:13,621 | INFO     | . payload setup = 7 s
[2025-07-27 02:53:47] 2025-07-27 06:53:13,622 | INFO     | . stage-in = 0 s
[2025-07-27 02:53:47] 2025-07-27 06:53:13,622 | INFO     | . payload execution = 8339 s
[2025-07-27 02:53:47] 2025-07-27 06:53:13,622 | INFO     | . stage-out = 0 s
[2025-07-27 02:53:47] 2025-07-27 06:53:13,622 | INFO     | . log creation = 0 s
[2025-07-27 02:53:47] 2025-07-27 06:53:13,622 | INFO     | ..............................
[2025-07-27 02:53:47] 2025-07-27 06:53:13,732 | INFO     | 
[2025-07-27 02:53:47] 2025-07-27 06:53:13,733 | INFO     | job summary report
[2025-07-27 02:53:47] 2025-07-27 06:53:13,733 | INFO     | --------------------------------------------------
[2025-07-27 02:53:47] 2025-07-27 06:53:13,733 | INFO     | PanDA job id: 6745867295
[2025-07-27 02:53:47] 2025-07-27 06:53:13,733 | INFO     | task id: 45758797
[2025-07-27 02:53:47] 2025-07-27 06:53:13,733 | INFO     | errors: (none)
[2025-07-27 02:53:47] 2025-07-27 06:53:13,733 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 02:53:47] 2025-07-27 06:53:13,733 | INFO     | pilot state: finished 
[2025-07-27 02:53:47] 2025-07-27 06:53:13,733 | INFO     | transexitcode: 0
[2025-07-27 02:53:47] 2025-07-27 06:53:13,734 | INFO     | exeerrorcode: 0
[2025-07-27 02:53:47] 2025-07-27 06:53:13,735 | INFO     | exeerrordiag: 
[2025-07-27 02:53:47] 2025-07-27 06:53:13,735 | INFO     | exitcode: 0
[2025-07-27 02:53:47] 2025-07-27 06:53:13,735 | INFO     | exitmsg: OK
[2025-07-27 02:53:47] 2025-07-27 06:53:13,736 | INFO     | cpuconsumptiontime: 61738 s
[2025-07-27 02:53:47] 2025-07-27 06:53:13,737 | INFO     | nevents: 400
[2025-07-27 02:53:47] 2025-07-27 06:53:13,737 | INFO     | neventsw: 0
[2025-07-27 02:53:47] 2025-07-27 06:53:13,737 | INFO     | pid: 464913
[2025-07-27 02:53:47] 2025-07-27 06:53:13,738 | INFO     | pgrp: 464913
[2025-07-27 02:53:47] 2025-07-27 06:53:13,738 | INFO     | corecount: 10
[2025-07-27 02:53:47] 2025-07-27 06:53:13,738 | INFO     | event service: False
[2025-07-27 02:53:47] 2025-07-27 06:53:13,739 | INFO     | sizes: {0: 2397476, 5: 2397738, 11: 2397794, 8349: 2425908, 8350: 2425907, 8351: 2434961, 8353: 2435145, 8360: 2435339}
[2025-07-27 02:53:47] 2025-07-27 06:53:13,740 | INFO     | --------------------------------------------------
[2025-07-27 02:53:47] 2025-07-27 06:53:13,740 | INFO     | 
[2025-07-27 02:53:47] 2025-07-27 06:53:13,740 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 02:53:47] 2025-07-27 06:53:13,767 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 02:53:47] 2025-07-27 06:53:13,767 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 02:53:47] 2025-07-27 06:53:13,767 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 02:53:47] 2025-07-27 06:53:13,767 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 02:53:47] 2025-07-27 06:53:13,768 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 02:53:47] 2025-07-27 06:53:13,768 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 02:53:47] 2025-07-27 06:53:13,768 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 02:53:47] 2025-07-27 06:53:13,768 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 02:53:47] 2025-07-27 06:53:13,768 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 02:53:47] 2025-07-27 06:53:13,768 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 02:53:47] 2025-07-27 06:53:13,768 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 02:53:47] 2025-07-27 06:53:13,768 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 02:53:47] 2025-07-27 06:53:13,769 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 02:53:47] 2025-07-27 06:53:13,769 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 02:53:47] 2025-07-27 06:53:13,769 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 02:53:47] 2025-07-27 06:53:13,769 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 02:53:47] 2025-07-27 06:53:13,769 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 02:53:47] 2025-07-27 06:53:13,769 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 02:53:47] 2025-07-27 06:53:13,769 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 02:53:47] 2025-07-27 06:53:13,769 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 02:53:47] 2025-07-27 06:53:13,770 | INFO     | job 6745867295 has completed (purged errors)
[2025-07-27 02:53:47] 2025-07-27 06:53:13,770 | INFO     | overall cleanup function is called
[2025-07-27 02:53:47] 2025-07-27 06:53:14,778 | INFO     | --- collectZombieJob: --- 10, [464913]
[2025-07-27 02:53:47] 2025-07-27 06:53:14,778 | INFO     | zombie collector waiting for pid 464913
[2025-07-27 02:53:47] 2025-07-27 06:53:14,778 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 02:53:47] 2025-07-27 06:53:14,779 | INFO     | collected zombie processes
[2025-07-27 02:53:47] 2025-07-27 06:53:14,779 | INFO     | will attempt to kill all subprocesses of pid=464913
[2025-07-27 02:53:47] 2025-07-27 06:53:15,040 | INFO     | process IDs to be killed: [464913] (in reverse order)
[2025-07-27 02:53:47] 2025-07-27 06:53:15,130 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 02:53:47] 2025-07-27 06:53:15,131 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 02:53:47] 2025-07-27 06:53:15,141 | INFO     | did not find any defunct processes belonging to 464913
[2025-07-27 02:53:47] 2025-07-27 06:53:15,151 | INFO     | did not find any defunct processes belonging to 464913
[2025-07-27 02:53:47] 2025-07-27 06:53:15,151 | INFO     | ready for new job
[2025-07-27 02:53:47] 2025-07-27 06:53:15,151 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 02:53:47] 2025-07-27 06:53:15,153 | INFO     | ***************************************
[2025-07-27 02:53:47] 2025-07-27 06:53:15,154 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 02:53:47] 2025-07-27 06:53:15,154 | INFO     | ***************************************
[2025-07-27 02:53:47] 2025-07-27 06:53:15,154 | INFO     | 
[2025-07-27 02:53:47] 2025-07-27 06:53:15,169 | INFO     | architecture information:
[2025-07-27 02:53:47] 2025-07-27 06:53:15,169 | INFO     | executing command: cat /etc/os-release
[2025-07-27 02:53:47] 2025-07-27 06:53:15,187 | INFO     | cat /etc/os-release:
[2025-07-27 02:53:47] NAME="CentOS Linux"
[2025-07-27 02:53:47] VERSION="7 (Core)"
[2025-07-27 02:53:47] ID="centos"
[2025-07-27 02:53:47] ID_LIKE="rhel fedora"
[2025-07-27 02:53:47] VERSION_ID="7"
[2025-07-27 02:53:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 02:53:47] ANSI_COLOR="0;31"
[2025-07-27 02:53:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 02:53:47] HOME_URL="https://www.centos.org/"
[2025-07-27 02:53:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 02:53:47] 
[2025-07-27 02:53:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 02:53:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 02:53:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 02:53:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 02:53:47] 
[2025-07-27 02:53:47] 2025-07-27 06:53:15,187 | INFO     | ***************************************
[2025-07-27 02:53:47] 2025-07-27 06:53:15,690 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 02:53:47] 2025-07-27 06:53:15,711 | INFO     | sufficient remaining disk space (76529270784 B)
[2025-07-27 02:53:47] 2025-07-27 06:53:15,712 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 02:53:47] 2025-07-27 06:53:15,712 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 02:53:47] 2025-07-27 06:53:15,712 | INFO     | update_server=False
[2025-07-27 02:53:47] 2025-07-27 06:53:15,712 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 02:53:47] 2025-07-27 06:53:15,712 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 02:53:47] 2025-07-27 06:53:15,713 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 02:53:47] 2025-07-27 06:53:15,714 | INFO     | aborting loop
[2025-07-27 02:53:47] 2025-07-27 06:53:16,108 | INFO     | all data control threads have been joined
[2025-07-27 02:53:47] 2025-07-27 06:53:16,362 | INFO     | all payload control threads have been joined
[2025-07-27 02:53:47] 2025-07-27 06:53:16,717 | INFO     | [job] retrieve thread has finished
[2025-07-27 02:53:47] 2025-07-27 06:53:16,719 | INFO     | [job] queue monitor thread has finished
[2025-07-27 02:53:47] 2025-07-27 06:53:16,720 | INFO     | [job] job monitor thread has finished
[2025-07-27 02:53:47] 2025-07-27 06:53:16,798 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 02:53:47] 2025-07-27 06:53:17,113 | INFO     | [data] control thread has finished
[2025-07-27 02:53:47] 2025-07-27 06:53:17,114 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 02:53:47] 2025-07-27 06:53:17,224 | INFO     | all job control threads have been joined
[2025-07-27 02:53:47] 2025-07-27 06:53:17,235 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 02:53:47] 2025-07-27 06:53:17,236 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 02:53:47] 2025-07-27 06:53:17,367 | INFO     | [payload] control thread has finished
[2025-07-27 02:53:47] 2025-07-27 06:53:17,460 | INFO     | [payload] failed_post thread has finished
[2025-07-27 02:53:47] 2025-07-27 06:53:17,508 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 02:53:47] 2025-07-27 06:53:17,643 | INFO     | [job] validate thread has finished
[2025-07-27 02:53:47] 2025-07-27 06:53:17,963 | INFO     | [data] copytool_in thread has finished
[2025-07-27 02:53:47] 2025-07-27 06:53:18,229 | INFO     | [job] control thread has finished
[2025-07-27 02:53:47] 2025-07-27 06:53:18,262 | INFO     | [payload] validate_post thread has finished
[2025-07-27 02:53:47] 2025-07-27 06:53:19,119 | INFO     | [data] copytool_out thread has finished
[2025-07-27 02:53:47] 2025-07-27 06:53:20,806 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 02:53:47] 2025-07-27 06:53:26,685 | INFO     | job.realtimelogging is not enabled
[2025-07-27 02:53:47] 2025-07-27 06:53:27,690 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 02:53:47] 2025-07-27 06:53:28,239 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139859853547328)>', '<ExcThread(monitor, started 139859226257152)>']
[2025-07-27 02:53:47] 2025-07-27 06:53:33,264 | INFO     | all workflow threads have been joined
[2025-07-27 02:53:47] 2025-07-27 06:53:33,264 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 02:53:47] 2025-07-27 06:53:33,265 | INFO     | traces error code: 0
[2025-07-27 02:53:47] 2025-07-27 06:53:33,265 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 02:53:47] 2025-07-27 06:53:46,972 | INFO     | PID=458462 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 02:53:47] 2025-07-27 06:53:46,972 | INFO     | .. there are 11 such processes running
[2025-07-27 02:53:47] 2025-07-27 06:53:46,972 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 02:53:47] 2025-07-27 06:53:46,972 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 02:53:47] 2025-07-27 06:53:46,972 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 02:53:47] 2025-07-27 06:53:46,973 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 02:53:47] 2025-07-27 06:53:46,973 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 02:53:47] 2025-07-27 06:53:46,973 | INFO     | [monitor] control thread has ended
[2025-07-27 02:53:47] 2025-07-27 06:53:47,147 [wrapper] ==== pilot stdout END ====
[2025-07-27 02:53:47] 2025-07-27 06:53:47,152 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 02:53:47] 2025-07-27 06:53:47,157 [wrapper] pilotpid: 458462
[2025-07-27 02:53:47] 2025-07-27 06:53:47,163 [wrapper] Pilot exit status: 0
[2025-07-27 02:53:47] 2025-07-27 06:53:47,175 [wrapper] pandaids: 6745867295
[2025-07-27 02:53:47] 2025-07-27 06:53:47,242 [wrapper] cleanup supervisor_pilot  761571 458463
[2025-07-27 02:53:47] 2025-07-27 06:53:47,247 [wrapper] Test setup, not cleaning
[2025-07-27 02:53:47] 2025-07-27 06:53:47,251 [wrapper] apfmon messages muted
[2025-07-27 02:53:47] 2025-07-27 06:53:47,255 [wrapper] ==== wrapper stdout END ====
[2025-07-27 02:53:47] 2025-07-27 06:53:47,260 [wrapper] ==== wrapper stderr END ====
[2025-07-27 02:53:47]  *** Error codes and diagnostics ***
[2025-07-27 02:53:47]     "exeErrorCode": 0,
[2025-07-27 02:53:47]     "exeErrorDiag": "",
[2025-07-27 02:53:47]     "pilotErrorCode": 0,
[2025-07-27 02:53:47]     "pilotErrorDiag": "",
[2025-07-27 02:53:47]  *** Listing of results directory ***
[2025-07-27 02:53:47] total 413156
[2025-07-27 02:53:47] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 19:07 pilot3.tar.gz
[2025-07-27 02:53:47] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 19:18 queuedata.json
[2025-07-27 02:53:47] -rwx------. 1 boincer umatlas     36292 Jul 26 19:19 runpilot2-wrapper.sh
[2025-07-27 02:53:47] -rw-r--r--. 1 boincer umatlas       100 Jul 27 00:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 02:53:47] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 00:33 run_atlas
[2025-07-27 02:53:47] -rw-r--r--. 1 boincer umatlas       105 Jul 27 00:33 job.xml
[2025-07-27 02:53:47] -rw-r--r--. 2 boincer umatlas 243943757 Jul 27 00:33 EVNT.45758795._000004.pool.root.1
[2025-07-27 02:53:47] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 00:33 start_atlas.sh
[2025-07-27 02:53:47] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 00:33 shared
[2025-07-27 02:53:47] -rw-r--r--. 2 boincer umatlas    542891 Jul 27 00:33 input.tar.gz
[2025-07-27 02:53:47] -rw-r--r--. 1 boincer umatlas         0 Jul 27 00:33 boinc_lockfile
[2025-07-27 02:53:47] -rw-r--r--. 1 boincer umatlas      2569 Jul 27 00:33 pandaJob.out
[2025-07-27 02:53:47] -rw-------. 1 boincer umatlas    980125 Jul 27 00:33 agis_schedconf.cvmfs.json
[2025-07-27 02:53:47] -rw-------. 1 boincer umatlas   1593052 Jul 27 00:33 agis_ddmendpoints.agis.ALL.json
[2025-07-27 02:53:47] drwx------. 4 boincer umatlas      4096 Jul 27 00:33 pilot3
[2025-07-27 02:53:47] -rw-r--r--. 1 boincer umatlas      6658 Jul 27 02:47 init_data.xml
[2025-07-27 02:53:47] -rw-------. 1 boincer umatlas 172977539 Jul 27 02:52 HITS.45758797._000079.pool.root.1
[2025-07-27 02:53:47] -rw-r--r--. 1 boincer umatlas       529 Jul 27 02:52 boinc_task_state.xml
[2025-07-27 02:53:47] -rw-------. 1 boincer umatlas      1039 Jul 27 02:52 memory_monitor_summary.json
[2025-07-27 02:53:47] -rw-------. 1 boincer umatlas    360828 Jul 27 02:53 log.45758797._000079.job.log.tgz.1
[2025-07-27 02:53:47] -rw-------. 1 boincer umatlas        95 Jul 27 02:53 pilot_heartbeat.json
[2025-07-27 02:53:47] -rw-------. 1 boincer umatlas      7808 Jul 27 02:53 heartbeat.json
[2025-07-27 02:53:47] -rw-r--r--. 1 boincer umatlas        27 Jul 27 02:53 wrapper_checkpoint.txt
[2025-07-27 02:53:47] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 02:53 boinc_mmap_file
[2025-07-27 02:53:47] -rw-------. 1 boincer umatlas       892 Jul 27 02:53 pilotlog.txt
[2025-07-27 02:53:47] -rw-------. 1 boincer umatlas    776250 Jul 27 02:53 log.45758797._000079.job.log.1
[2025-07-27 02:53:47] -rw-------. 1 boincer umatlas       357 Jul 27 02:53 output.list
[2025-07-27 02:53:47] -rw-r--r--. 1 boincer umatlas       620 Jul 27 02:53 runtime_log
[2025-07-27 02:53:47] -rw-------. 1 boincer umatlas   1157120 Jul 27 02:53 result.tar.gz
[2025-07-27 02:53:47] -rw-r--r--. 1 boincer umatlas      8652 Jul 27 02:53 runtime_log.err
[2025-07-27 02:53:47] -rw-------. 1 boincer umatlas       652 Jul 27 02:53 CdRNDmqL3z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZSTLDmjnHqSm.diag
[2025-07-27 02:53:47] -rw-r--r--. 1 boincer umatlas     21205 Jul 27 02:53 stderr.txt
[2025-07-27 02:53:47] HITS file was successfully produced:
[2025-07-27 02:53:47] -rw-------. 1 boincer umatlas 172977539 Jul 27 02:52 shared/HITS.pool.root.1
[2025-07-27 02:53:47]  *** Contents of shared directory: ***
[2025-07-27 02:53:47] total 408836
[2025-07-27 02:53:47] -rw-r--r--. 2 boincer umatlas 243943757 Jul 27 00:33 ATLAS.root_0
[2025-07-27 02:53:47] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 00:33 start_atlas.sh
[2025-07-27 02:53:47] -rw-r--r--. 2 boincer umatlas    542891 Jul 27 00:33 input.tar.gz
[2025-07-27 02:53:47] -rw-------. 1 boincer umatlas 172977539 Jul 27 02:52 HITS.pool.root.1
[2025-07-27 02:53:47] -rw-------. 1 boincer umatlas   1157120 Jul 27 02:53 result.tar.gz
02:53:49 (454447): run_atlas exited; CPU time 61950.798601
02:53:49 (454447): called boinc_finish(0)

</stderr_txt>
]]>

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