Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:52:51 (7964): wrapper (7.7.26015): starting
00:52:51 (7964): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 00:52:51] Arguments: --nthreads 8
[2025-07-27 00:52:51] Threads: 8
[2025-07-27 00:52:51] Checking for CVMFS
[2025-07-27 00:52:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 00:52:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 00:52:52] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 00:52:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 00:52:52] 2.11.2.0 2871 84398 81636 148800 1 58 13051004 20275200 1 130560 0 20783003 99.959 4397506 39960 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 00:52:52] CVMFS is ok
[2025-07-27 00:52:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 00:52:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 00:52:52] Further information can be found at the LHC@home message board.
[2025-07-27 00:52:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 00:52:52] Checking for apptainer binary...
[2025-07-27 00:52:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 00:52:52] Running /usr/bin/apptainer --version
[2025-07-27 00:52:52] apptainer version 1.3.2-1.el7
[2025-07-27 00:52:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 00:52:54] c-115-7.aglt2.org
[2025-07-27 00:52:54] apptainer works
[2025-07-27 00:52:54] Set ATHENA_PROC_NUMBER=8
[2025-07-27 00:52:54] Set ATHENA_CORE_NUMBER=8
[2025-07-27 00:52:54] Starting ATLAS job with PandaID=6745891021
[2025-07-27 00:52:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 03:15:37]  *** The last 200 lines of the pilot log: ***
[2025-07-27 03:15:37] 2025-07-27 07:15:03,065 | INFO     | monitor loop #629: job 0:6745891021 is in state 'finished'
[2025-07-27 03:15:37] 2025-07-27 07:15:03,066 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:15:37] 2025-07-27 07:15:03,454 | INFO     | 8517s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-27 03:15:37] 2025-07-27 07:15:04,568 | INFO     | PID=11596 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 03:15:37] 2025-07-27 07:15:05,116 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 03:15:37] 2025-07-27 07:15:05,119 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-07-27 03:15:37] 2025-07-27 07:15:05,121 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745891021/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 03:15:37] 2025-07-27 07:15:05,121 | INFO     | extracted standard info from prmon json
[2025-07-27 03:15:37] 2025-07-27 07:15:05,122 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 03:15:37] 2025-07-27 07:15:05,122 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 03:15:37] 2025-07-27 07:15:05,122 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 03:15:37] 2025-07-27 07:15:05,122 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 03:15:37] 2025-07-27 07:15:05,126 | INFO     | fitting pss+swap vs Time
[2025-07-27 03:15:37] 2025-07-27 07:15:05,126 | INFO     | sum of square deviations: 832722590.0
[2025-07-27 03:15:37] 2025-07-27 07:15:05,127 | INFO     | sum of deviations: 7965123921.999998
[2025-07-27 03:15:37] 2025-07-27 07:15:05,127 | INFO     | mean x: 1753596231.0
[2025-07-27 03:15:37] 2025-07-27 07:15:05,127 | INFO     | mean y: 2525328.021582734
[2025-07-27 03:15:37] 2025-07-27 07:15:05,127 | INFO     | -- intersect: -16770901329.068546
[2025-07-27 03:15:37] 2025-07-27 07:15:05,127 | INFO     | intersect: -16770901329.068546
[2025-07-27 03:15:37] 2025-07-27 07:15:05,128 | INFO     | chi2: 1.4672969477429942
[2025-07-27 03:15:37] 2025-07-27 07:15:05,128 | INFO     | sum of square deviations: 746051197.5
[2025-07-27 03:15:37] 2025-07-27 07:15:05,129 | INFO     | sum of deviations: 7567953837.000003
[2025-07-27 03:15:37] 2025-07-27 07:15:05,129 | INFO     | mean x: 1753596078.5
[2025-07-27 03:15:37] 2025-07-27 07:15:05,129 | INFO     | mean y: 2524631.462686567
[2025-07-27 03:15:37] 2025-07-27 07:15:05,129 | INFO     | -- intersect: -17785978644.590607
[2025-07-27 03:15:37] 2025-07-27 07:15:05,129 | INFO     | intersect: -17785978644.590607
[2025-07-27 03:15:37] 2025-07-27 07:15:05,129 | INFO     | chi2: 1.468656787534233
[2025-07-27 03:15:37] 2025-07-27 07:15:05,130 | INFO     | current chi2=1.468656787534233 (change=-0.09267652286269483 %)
[2025-07-27 03:15:37] 2025-07-27 07:15:05,130 | INFO     | right removable region: 133
[2025-07-27 03:15:37] 2025-07-27 07:15:05,130 | INFO     | sum of square deviations: 746051197.5
[2025-07-27 03:15:37] 2025-07-27 07:15:05,130 | INFO     | sum of deviations: -11531909699.999998
[2025-07-27 03:15:37] 2025-07-27 07:15:05,131 | INFO     | mean x: 1753596383.5
[2025-07-27 03:15:37] 2025-07-27 07:15:05,131 | INFO     | mean y: 2559024.1343283583
[2025-07-27 03:15:37] 2025-07-27 07:15:05,131 | INFO     | -- intersect: 27108359822.434856
[2025-07-27 03:15:37] 2025-07-27 07:15:05,131 | INFO     | intersect: 27108359822.434856
[2025-07-27 03:15:37] 2025-07-27 07:15:05,131 | INFO     | chi2: 0.10706809925632017
[2025-07-27 03:15:37] 2025-07-27 07:15:05,131 | INFO     | current chi2=0.10706809925632017 (change=92.70303809866073 %)
[2025-07-27 03:15:37] 2025-07-27 07:15:05,132 | INFO     | sum of square deviations: 665612480.0
[2025-07-27 03:15:37] 2025-07-27 07:15:05,132 | INFO     | sum of deviations: -8978436524.0
[2025-07-27 03:15:37] 2025-07-27 07:15:05,132 | INFO     | mean x: 1753596536.0
[2025-07-27 03:15:37] 2025-07-27 07:15:05,132 | INFO     | mean y: 2554099.8372093025
[2025-07-27 03:15:37] 2025-07-27 07:15:05,132 | INFO     | -- intersect: 23656790852.102253
[2025-07-27 03:15:37] 2025-07-27 07:15:05,133 | INFO     | intersect: 23656790852.102253
[2025-07-27 03:15:37] 2025-07-27 07:15:05,133 | INFO     | chi2: 0.09281948377387758
[2025-07-27 03:15:37] 2025-07-27 07:15:05,133 | INFO     | current chi2=0.09281948377387758 (change=13.307993306513755 %)
[2025-07-27 03:15:37] 2025-07-27 07:15:05,133 | INFO     | left removable region: 20
[2025-07-27 03:15:37] 2025-07-27 07:15:05,133 | INFO     | sum of square deviations: 447383272.0
[2025-07-27 03:15:37] 2025-07-27 07:15:05,134 | INFO     | sum of deviations: 492557676.0
[2025-07-27 03:15:37] 2025-07-27 07:15:05,134 | INFO     | mean x: 1753596658.0
[2025-07-27 03:15:37] 2025-07-27 07:15:05,134 | INFO     | mean y: 2532848.132743363
[2025-07-27 03:15:37] 2025-07-27 07:15:05,134 | INFO     | -- intersect: -1928132754.6389372
[2025-07-27 03:15:37] 2025-07-27 07:15:05,134 | INFO     | intersect: -1928132754.6389372
[2025-07-27 03:15:37] 2025-07-27 07:15:05,134 | INFO     | chi2: 0.013073648555146903
[2025-07-27 03:15:37] 2025-07-27 07:15:05,135 | INFO     | -- intersect: -1928132754.6389372
[2025-07-27 03:15:37] 2025-07-27 07:15:05,135 | INFO     | current memory leak: 1.10 B/s (using 113 data points, chi2=0.01)
[2025-07-27 03:15:37] 2025-07-27 07:15:05,135 | INFO     | could have reported an average CPU frequency of 2138 MHz (8 samples)
[2025-07-27 03:15:37] 2025-07-27 07:15:05,135 | INFO     | ..............................
[2025-07-27 03:15:37] 2025-07-27 07:15:05,135 | INFO     | . Timing measurements:
[2025-07-27 03:15:37] 2025-07-27 07:15:05,135 | INFO     | . get job = 0 s
[2025-07-27 03:15:37] 2025-07-27 07:15:05,136 | INFO     | . initial setup = 2 s
[2025-07-27 03:15:37] 2025-07-27 07:15:05,136 | INFO     | . payload setup = 11 s
[2025-07-27 03:15:37] 2025-07-27 07:15:05,136 | INFO     | . stage-in = 0 s
[2025-07-27 03:15:37] 2025-07-27 07:15:05,136 | INFO     | . payload execution = 8474 s
[2025-07-27 03:15:37] 2025-07-27 07:15:05,136 | INFO     | . stage-out = 0 s
[2025-07-27 03:15:37] 2025-07-27 07:15:05,136 | INFO     | . log creation = 0 s
[2025-07-27 03:15:37] 2025-07-27 07:15:05,136 | INFO     | ..............................
[2025-07-27 03:15:37] 2025-07-27 07:15:05,224 | INFO     | 
[2025-07-27 03:15:37] 2025-07-27 07:15:05,224 | INFO     | job summary report
[2025-07-27 03:15:37] 2025-07-27 07:15:05,224 | INFO     | --------------------------------------------------
[2025-07-27 03:15:37] 2025-07-27 07:15:05,225 | INFO     | PanDA job id: 6745891021
[2025-07-27 03:15:37] 2025-07-27 07:15:05,225 | INFO     | task id: 45758408
[2025-07-27 03:15:37] 2025-07-27 07:15:05,225 | INFO     | errors: (none)
[2025-07-27 03:15:37] 2025-07-27 07:15:05,225 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 03:15:37] 2025-07-27 07:15:05,225 | INFO     | pilot state: finished 
[2025-07-27 03:15:37] 2025-07-27 07:15:05,225 | INFO     | transexitcode: 0
[2025-07-27 03:15:37] 2025-07-27 07:15:05,226 | INFO     | exeerrorcode: 0
[2025-07-27 03:15:37] 2025-07-27 07:15:05,226 | INFO     | exeerrordiag: 
[2025-07-27 03:15:37] 2025-07-27 07:15:05,226 | INFO     | exitcode: 0
[2025-07-27 03:15:37] 2025-07-27 07:15:05,226 | INFO     | exitmsg: OK
[2025-07-27 03:15:37] 2025-07-27 07:15:05,226 | INFO     | cpuconsumptiontime: 63383 s
[2025-07-27 03:15:37] 2025-07-27 07:15:05,226 | INFO     | nevents: 400
[2025-07-27 03:15:37] 2025-07-27 07:15:05,227 | INFO     | neventsw: 0
[2025-07-27 03:15:37] 2025-07-27 07:15:05,227 | INFO     | pid: 18107
[2025-07-27 03:15:37] 2025-07-27 07:15:05,227 | INFO     | pgrp: 18107
[2025-07-27 03:15:37] 2025-07-27 07:15:05,227 | INFO     | corecount: 8
[2025-07-27 03:15:37] 2025-07-27 07:15:05,227 | INFO     | event service: False
[2025-07-27 03:15:37] 2025-07-27 07:15:05,228 | INFO     | sizes: {0: 2397307, 1: 2397506, 6: 2397768, 11: 2397796, 8489: 2425640, 8491: 2434638, 8492: 2434850, 8499: 2435044}
[2025-07-27 03:15:37] 2025-07-27 07:15:05,228 | INFO     | --------------------------------------------------
[2025-07-27 03:15:37] 2025-07-27 07:15:05,228 | INFO     | 
[2025-07-27 03:15:37] 2025-07-27 07:15:05,228 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 03:15:37] 2025-07-27 07:15:05,260 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 03:15:37] 2025-07-27 07:15:05,261 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 03:15:37] 2025-07-27 07:15:05,261 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 03:15:37] 2025-07-27 07:15:05,261 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 03:15:37] 2025-07-27 07:15:05,261 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 03:15:37] 2025-07-27 07:15:05,261 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 03:15:37] 2025-07-27 07:15:05,262 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 03:15:37] 2025-07-27 07:15:05,262 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 03:15:37] 2025-07-27 07:15:05,262 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 03:15:37] 2025-07-27 07:15:05,262 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 03:15:37] 2025-07-27 07:15:05,263 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 03:15:37] 2025-07-27 07:15:05,263 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 03:15:37] 2025-07-27 07:15:05,263 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 03:15:37] 2025-07-27 07:15:05,263 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 03:15:37] 2025-07-27 07:15:05,264 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 03:15:37] 2025-07-27 07:15:05,264 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 03:15:37] 2025-07-27 07:15:05,264 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 03:15:37] 2025-07-27 07:15:05,264 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 03:15:37] 2025-07-27 07:15:05,264 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 03:15:37] 2025-07-27 07:15:05,265 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 03:15:37] 2025-07-27 07:15:05,265 | INFO     | job 6745891021 has completed (purged errors)
[2025-07-27 03:15:37] 2025-07-27 07:15:05,265 | INFO     | overall cleanup function is called
[2025-07-27 03:15:37] 2025-07-27 07:15:06,274 | INFO     | --- collectZombieJob: --- 10, [18107]
[2025-07-27 03:15:37] 2025-07-27 07:15:06,274 | INFO     | zombie collector waiting for pid 18107
[2025-07-27 03:15:37] 2025-07-27 07:15:06,274 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 03:15:37] 2025-07-27 07:15:06,275 | INFO     | collected zombie processes
[2025-07-27 03:15:37] 2025-07-27 07:15:06,275 | INFO     | will attempt to kill all subprocesses of pid=18107
[2025-07-27 03:15:37] 2025-07-27 07:15:06,362 | INFO     | process IDs to be killed: [18107] (in reverse order)
[2025-07-27 03:15:37] 2025-07-27 07:15:06,418 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 03:15:37] 2025-07-27 07:15:06,419 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 03:15:37] 2025-07-27 07:15:06,424 | INFO     | did not find any defunct processes belonging to 18107
[2025-07-27 03:15:37] 2025-07-27 07:15:06,428 | INFO     | did not find any defunct processes belonging to 18107
[2025-07-27 03:15:37] 2025-07-27 07:15:06,428 | INFO     | ready for new job
[2025-07-27 03:15:37] 2025-07-27 07:15:06,429 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 03:15:37] 2025-07-27 07:15:06,430 | INFO     | ***************************************
[2025-07-27 03:15:37] 2025-07-27 07:15:06,430 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 03:15:37] 2025-07-27 07:15:06,431 | INFO     | ***************************************
[2025-07-27 03:15:37] 2025-07-27 07:15:06,431 | INFO     | 
[2025-07-27 03:15:37] 2025-07-27 07:15:06,431 | INFO     | architecture information:
[2025-07-27 03:15:37] 2025-07-27 07:15:06,432 | INFO     | executing command: cat /etc/os-release
[2025-07-27 03:15:37] 2025-07-27 07:15:06,451 | INFO     | cat /etc/os-release:
[2025-07-27 03:15:37] NAME="CentOS Linux"
[2025-07-27 03:15:37] VERSION="7 (Core)"
[2025-07-27 03:15:37] ID="centos"
[2025-07-27 03:15:37] ID_LIKE="rhel fedora"
[2025-07-27 03:15:37] VERSION_ID="7"
[2025-07-27 03:15:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 03:15:37] ANSI_COLOR="0;31"
[2025-07-27 03:15:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 03:15:37] HOME_URL="https://www.centos.org/"
[2025-07-27 03:15:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 03:15:37] 
[2025-07-27 03:15:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 03:15:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 03:15:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 03:15:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 03:15:37] 
[2025-07-27 03:15:37] 2025-07-27 07:15:06,451 | INFO     | ***************************************
[2025-07-27 03:15:37] 2025-07-27 07:15:06,955 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 03:15:37] 2025-07-27 07:15:07,016 | INFO     | sufficient remaining disk space (18593349632 B)
[2025-07-27 03:15:37] 2025-07-27 07:15:07,016 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 03:15:37] 2025-07-27 07:15:07,017 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 03:15:37] 2025-07-27 07:15:07,017 | INFO     | update_server=False
[2025-07-27 03:15:37] 2025-07-27 07:15:07,017 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 03:15:37] 2025-07-27 07:15:07,018 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 03:15:37] 2025-07-27 07:15:07,018 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 03:15:37] 2025-07-27 07:15:07,019 | INFO     | aborting loop
[2025-07-27 03:15:37] 2025-07-27 07:15:07,542 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 03:15:37] 2025-07-27 07:15:07,564 | INFO     | all payload control threads have been joined
[2025-07-27 03:15:37] 2025-07-27 07:15:08,023 | INFO     | [job] retrieve thread has finished
[2025-07-27 03:15:37] 2025-07-27 07:15:08,024 | INFO     | [job] job monitor thread has finished
[2025-07-27 03:15:37] 2025-07-27 07:15:08,024 | INFO     | [job] queue monitor thread has finished
[2025-07-27 03:15:37] 2025-07-27 07:15:08,097 | INFO     | all data control threads have been joined
[2025-07-27 03:15:37] 2025-07-27 07:15:08,363 | INFO     | [payload] failed_post thread has finished
[2025-07-27 03:15:37] 2025-07-27 07:15:08,479 | INFO     | all job control threads have been joined
[2025-07-27 03:15:37] 2025-07-27 07:15:08,570 | INFO     | [payload] control thread has finished
[2025-07-27 03:15:37] 2025-07-27 07:15:08,683 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 03:15:37] 2025-07-27 07:15:08,686 | INFO     | [data] copytool_in thread has finished
[2025-07-27 03:15:37] 2025-07-27 07:15:08,693 | INFO     | [job] validate thread has finished
[2025-07-27 03:15:37] 2025-07-27 07:15:08,769 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 03:15:37] 2025-07-27 07:15:08,952 | INFO     | [payload] validate_post thread has finished
[2025-07-27 03:15:37] 2025-07-27 07:15:08,970 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 03:15:37] 2025-07-27 07:15:09,085 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 03:15:37] 2025-07-27 07:15:09,103 | INFO     | [data] control thread has finished
[2025-07-27 03:15:37] 2025-07-27 07:15:09,485 | INFO     | [job] control thread has finished
[2025-07-27 03:15:37] 2025-07-27 07:15:09,548 | INFO     | [data] copytool_out thread has finished
[2025-07-27 03:15:37] 2025-07-27 07:15:12,775 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 03:15:37] 2025-07-27 07:15:17,786 | INFO     | job.realtimelogging is not enabled
[2025-07-27 03:15:37] 2025-07-27 07:15:18,789 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 03:15:37] 2025-07-27 07:15:19,889 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139674212153152)>', '<ExcThread(monitor, started 139673317918464)>']
[2025-07-27 03:15:37] 2025-07-27 07:15:24,914 | INFO     | all workflow threads have been joined
[2025-07-27 03:15:37] 2025-07-27 07:15:24,914 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 03:15:37] 2025-07-27 07:15:24,915 | INFO     | traces error code: 0
[2025-07-27 03:15:37] 2025-07-27 07:15:24,915 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 03:15:37] 2025-07-27 07:15:36,769 | INFO     | PID=11596 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 03:15:37] 2025-07-27 07:15:36,769 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 03:15:37] 2025-07-27 07:15:36,770 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 03:15:37] 2025-07-27 07:15:36,770 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 03:15:37] 2025-07-27 07:15:36,770 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 03:15:37] 2025-07-27 07:15:36,770 | INFO     | [monitor] control thread has ended
[2025-07-27 03:15:37] 2025-07-27 07:15:36,866 [wrapper] ==== pilot stdout END ====
[2025-07-27 03:15:37] 2025-07-27 07:15:36,870 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 03:15:37] 2025-07-27 07:15:36,875 [wrapper] pilotpid: 11596
[2025-07-27 03:15:37] 2025-07-27 07:15:36,879 [wrapper] Pilot exit status: 0
[2025-07-27 03:15:37] 2025-07-27 07:15:36,897 [wrapper] pandaids: 6745891021
[2025-07-27 03:15:37] 2025-07-27 07:15:36,943 [wrapper] cleanup supervisor_pilot  4420 11597
[2025-07-27 03:15:37] 2025-07-27 07:15:36,947 [wrapper] Test setup, not cleaning
[2025-07-27 03:15:37] 2025-07-27 07:15:36,952 [wrapper] apfmon messages muted
[2025-07-27 03:15:37] 2025-07-27 07:15:36,957 [wrapper] ==== wrapper stdout END ====
[2025-07-27 03:15:37] 2025-07-27 07:15:36,961 [wrapper] ==== wrapper stderr END ====
[2025-07-27 03:15:37]  *** Error codes and diagnostics ***
[2025-07-27 03:15:37]     "exeErrorCode": 0,
[2025-07-27 03:15:37]     "exeErrorDiag": "",
[2025-07-27 03:15:37]     "pilotErrorCode": 0,
[2025-07-27 03:15:37]     "pilotErrorDiag": "",
[2025-07-27 03:15:37]  *** Listing of results directory ***
[2025-07-27 03:15:37] total 406040
[2025-07-27 03:15:37] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 19:07 pilot3.tar.gz
[2025-07-27 03:15:37] -rwx------ 1 boincer umatlas     36292 Jul 26 19:20 runpilot2-wrapper.sh
[2025-07-27 03:15:37] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 19:20 queuedata.json
[2025-07-27 03:15:37] -rw-r--r-- 1 boincer umatlas       100 Jul 27 00:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 03:15:37] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 00:52 run_atlas
[2025-07-27 03:15:37] -rw-r--r-- 1 boincer umatlas       105 Jul 27 00:52 job.xml
[2025-07-27 03:15:37] -rw-r--r-- 2 boincer umatlas 239329472 Jul 27 00:52 EVNT.45758406._000001.pool.root.1
[2025-07-27 03:15:37] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 00:52 start_atlas.sh
[2025-07-27 03:15:37] drwxrwx--x 2 boincer umatlas      4096 Jul 27 00:52 shared
[2025-07-27 03:15:37] -rw-r--r-- 2 boincer umatlas    542882 Jul 27 00:52 input.tar.gz
[2025-07-27 03:15:37] -rw-r--r-- 1 boincer umatlas         0 Jul 27 00:52 boinc_lockfile
[2025-07-27 03:15:37] -rw-r--r-- 1 boincer umatlas      2574 Jul 27 00:52 pandaJob.out
[2025-07-27 03:15:37] -rw------- 1 boincer umatlas    980125 Jul 27 00:53 agis_schedconf.cvmfs.json
[2025-07-27 03:15:37] -rw------- 1 boincer umatlas   1593052 Jul 27 00:53 agis_ddmendpoints.agis.ALL.json
[2025-07-27 03:15:37] drwx------ 4 boincer umatlas      4096 Jul 27 00:53 pilot3
[2025-07-27 03:15:37] -rw-r--r-- 1 boincer umatlas      5824 Jul 27 03:11 init_data.xml
[2025-07-27 03:15:37] -rw------- 1 boincer umatlas 170362074 Jul 27 03:14 HITS.45758408._000008.pool.root.1
[2025-07-27 03:15:37] -rw------- 1 boincer umatlas      1050 Jul 27 03:14 memory_monitor_summary.json
[2025-07-27 03:15:37] -rw------- 1 boincer umatlas    333580 Jul 27 03:14 log.45758408._000008.job.log.tgz.1
[2025-07-27 03:15:37] -rw-r--r-- 1 boincer umatlas       530 Jul 27 03:15 boinc_task_state.xml
[2025-07-27 03:15:37] -rw------- 1 boincer umatlas        95 Jul 27 03:15 pilot_heartbeat.json
[2025-07-27 03:15:37] -rw------- 1 boincer umatlas      7824 Jul 27 03:15 heartbeat.json
[2025-07-27 03:15:37] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 03:15 boinc_mmap_file
[2025-07-27 03:15:37] -rw-r--r-- 1 boincer umatlas        27 Jul 27 03:15 wrapper_checkpoint.txt
[2025-07-27 03:15:37] -rw------- 1 boincer umatlas       745 Jul 27 03:15 pilotlog.txt
[2025-07-27 03:15:37] -rw------- 1 boincer umatlas    775161 Jul 27 03:15 log.45758408._000008.job.log.1
[2025-07-27 03:15:37] -rw------- 1 boincer umatlas       357 Jul 27 03:15 output.list
[2025-07-27 03:15:37] -rw-r--r-- 1 boincer umatlas       620 Jul 27 03:15 runtime_log
[2025-07-27 03:15:37] -rw------- 1 boincer umatlas   1126400 Jul 27 03:15 result.tar.gz
[2025-07-27 03:15:37] -rw------- 1 boincer umatlas       659 Jul 27 03:15 sOcKDmpM3z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmmb1KDml0Ocrm.diag
[2025-07-27 03:15:37] -rw-r--r-- 1 boincer umatlas      8655 Jul 27 03:15 runtime_log.err
[2025-07-27 03:15:37] -rw-r--r-- 1 boincer umatlas     21232 Jul 27 03:15 stderr.txt
[2025-07-27 03:15:37] HITS file was successfully produced:
[2025-07-27 03:15:37] -rw------- 1 boincer umatlas 170362074 Jul 27 03:14 shared/HITS.pool.root.1
[2025-07-27 03:15:37]  *** Contents of shared directory: ***
[2025-07-27 03:15:37] total 401748
[2025-07-27 03:15:37] -rw-r--r-- 2 boincer umatlas 239329472 Jul 27 00:52 ATLAS.root_0
[2025-07-27 03:15:37] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 00:52 start_atlas.sh
[2025-07-27 03:15:37] -rw-r--r-- 2 boincer umatlas    542882 Jul 27 00:52 input.tar.gz
[2025-07-27 03:15:37] -rw------- 1 boincer umatlas 170362074 Jul 27 03:14 HITS.pool.root.1
[2025-07-27 03:15:37] -rw------- 1 boincer umatlas   1126400 Jul 27 03:15 result.tar.gz
03:15:38 (7964): run_atlas exited; CPU time 63391.937372
03:15:38 (7964): called boinc_finish(0)

</stderr_txt>
]]>

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