Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
22:13:30 (67023): wrapper (7.7.26015): starting
22:13:30 (67023): wrapper: running run_atlas (--nthreads 6)
[2025-07-27 22:13:30] Arguments: --nthreads 6
[2025-07-27 22:13:30] Threads: 6
[2025-07-27 22:13:30] Checking for CVMFS
[2025-07-27 22:13:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 22:13:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 22:13:30] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 22:13:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 22:13:30] 2.11.5.0 4381 13 47452 148822 2 188 2944835 4194305 2957 130560 0 160036 99.990 2706 774 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.3.250:3128 1
[2025-07-27 22:13:30] CVMFS is ok
[2025-07-27 22:13:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 22:13:30] Checking for apptainer binary...
[2025-07-27 22:13:30] apptainer is not installed, using version from CVMFS
[2025-07-27 22:13:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 22:13:31] boinc-b450f
[2025-07-27 22:13:31] apptainer works
[2025-07-27 22:13:37] Set ATHENA_PROC_NUMBER=6
[2025-07-27 22:13:37] Set ATHENA_CORE_NUMBER=6
[2025-07-27 22:13:37] Starting ATLAS job with PandaID=6745388507
[2025-07-27 22:13:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 23:48:40]  *** The last 200 lines of the pilot log: ***
[2025-07-27 23:48:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 23:48:40]  replicas=None
[2025-07-27 23:48:40]  scope=mc23_13p6TeV
[2025-07-27 23:48:40]  status=None
[2025-07-27 23:48:40]  status_code=0
[2025-07-27 23:48:40]  storage_token=
[2025-07-27 23:48:40]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6745388507/log.45743349._043556.job.log.tgz.1
[2025-07-27 23:48:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ed/94/log.45743349._043556.job.log.tgz.1
[2025-07-27 23:48:40]  workdir=None
[2025-07-27 23:48:40] ]
[2025-07-27 23:48:40] 2025-07-27 21:48:14,875 | INFO     | transferring file log.45743349._043556.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6745388507/log.45743349._043556.job.log.tgz.1 to /var/lib/boinc
[2025-07-27 23:48:40] 2025-07-27 21:48:14,876 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6745388507/log.45743349._043556.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.457433
[2025-07-27 23:48:40] 2025-07-27 21:48:14,885 | INFO     | adding to output.list: log.45743349._043556.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ed/94/log.45743349._043556.job.log.tg
[2025-07-27 23:48:40] 2025-07-27 21:48:14,885 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 23:48:40] 2025-07-27 21:48:14,885 | INFO     | summary of transferred files:
[2025-07-27 23:48:40] 2025-07-27 21:48:14,885 | INFO     |  -- lfn=log.45743349._043556.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 23:48:40] 2025-07-27 21:48:14,885 | INFO     | stage-out finished correctly
[2025-07-27 23:48:40] 2025-07-27 21:48:15,128 | WARNING  | process 118531 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 23:48:40] 2025-07-27 21:48:15,128 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6745388507/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 23:48:40] 2025-07-27 21:48:15,216 | INFO     | number of running child processes to parent process 118531: 1
[2025-07-27 23:48:40] 2025-07-27 21:48:15,217 | INFO     | maximum number of monitored processes: 6
[2025-07-27 23:48:40] 2025-07-27 21:48:16,988 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 23:48:40] 2025-07-27 21:48:17,751 | INFO     | monitor loop #418: job 0:6745388507 is in state 'finished'
[2025-07-27 23:48:40] 2025-07-27 21:48:17,751 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:48:40] 2025-07-27 21:48:19,224 | INFO     | job 6745388507 has state=finished
[2025-07-27 23:48:40] 2025-07-27 21:48:19,224 | INFO     | preparing for final server update for job 6745388507 in state='finished'
[2025-07-27 23:48:40] 2025-07-27 21:48:19,224 | INFO     | this job has now completed (state=finished)
[2025-07-27 23:48:40] 2025-07-27 21:48:19,224 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 23:48:40] 2025-07-27 21:48:19,224 | INFO     | log transfer has been attempted: DONE
[2025-07-27 23:48:40] 2025-07-27 21:48:19,225 | INFO     | job 6745388507 has finished - writing final server update
[2025-07-27 23:48:40] 2025-07-27 21:48:19,225 | INFO     | total number of processed events: 400 (read)
[2025-07-27 23:48:40] 2025-07-27 21:48:19,225 | INFO     | executing command: lscpu
[2025-07-27 23:48:40] 2025-07-27 21:48:19,239 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 23:48:40] 2025-07-27 21:48:20,040 | INFO     | PID=77325 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 23:48:40] 2025-07-27 21:48:20,040 | INFO     | .. there are 4 such processes running
[2025-07-27 23:48:40] 2025-07-27 21:48:20,254 | INFO     | monitor loop #419: job 0:6745388507 is in state 'finished'
[2025-07-27 23:48:40] 2025-07-27 21:48:20,254 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 23:48:40] 2025-07-27 21:48:20,918 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 23:48:40] 2025-07-27 21:48:20,921 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 3862.8764583333323
[2025-07-27 23:48:40] 2025-07-27 21:48:20,923 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6745388507/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 23:48:40] 2025-07-27 21:48:20,923 | INFO     | extracted standard info from prmon json
[2025-07-27 23:48:40] 2025-07-27 21:48:20,924 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 23:48:40] 2025-07-27 21:48:20,924 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 23:48:40] 2025-07-27 21:48:20,924 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 23:48:40] 2025-07-27 21:48:20,924 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 23:48:40] 2025-07-27 21:48:20,925 | INFO     | fitting pss+swap vs Time
[2025-07-27 23:48:40] 2025-07-27 21:48:20,925 | INFO     | sum of square deviations: 197203697.5
[2025-07-27 23:48:40] 2025-07-27 21:48:20,926 | INFO     | sum of deviations: -119994625.0
[2025-07-27 23:48:40] 2025-07-27 21:48:20,926 | INFO     | mean x: 1753650134.5
[2025-07-27 23:48:40] 2025-07-27 21:48:20,926 | INFO     | mean y: 2421511.3720930233
[2025-07-27 23:48:40] 2025-07-27 21:48:20,926 | INFO     | -- intersect: 1069483604.7211646
[2025-07-27 23:48:40] 2025-07-27 21:48:20,926 | INFO     | intersect: 1069483604.7211646
[2025-07-27 23:48:40] 2025-07-27 21:48:20,926 | INFO     | chi2: 0.00143477960600302
[2025-07-27 23:48:40] 2025-07-27 21:48:20,926 | INFO     | -- intersect: 1069483604.7211646
[2025-07-27 23:48:40] 2025-07-27 21:48:20,926 | INFO     | current memory leak: -0.61 B/s (using 86 data points, chi2=0.00)
[2025-07-27 23:48:40] 2025-07-27 21:48:20,927 | INFO     | could have reported an average CPU frequency of 3966 MHz (7 samples)
[2025-07-27 23:48:40] 2025-07-27 21:48:20,927 | INFO     | ..............................
[2025-07-27 23:48:40] 2025-07-27 21:48:20,927 | INFO     | . Timing measurements:
[2025-07-27 23:48:40] 2025-07-27 21:48:20,927 | INFO     | . get job = 0 s
[2025-07-27 23:48:40] 2025-07-27 21:48:20,927 | INFO     | . initial setup = 1 s
[2025-07-27 23:48:40] 2025-07-27 21:48:20,927 | INFO     | . payload setup = 1 s
[2025-07-27 23:48:40] 2025-07-27 21:48:20,927 | INFO     | . stage-in = 0 s
[2025-07-27 23:48:40] 2025-07-27 21:48:20,927 | INFO     | . payload execution = 5654 s
[2025-07-27 23:48:40] 2025-07-27 21:48:20,927 | INFO     | . stage-out = 0 s
[2025-07-27 23:48:40] 2025-07-27 21:48:20,927 | INFO     | . log creation = 0 s
[2025-07-27 23:48:40] 2025-07-27 21:48:20,927 | INFO     | ..............................
[2025-07-27 23:48:40] 2025-07-27 21:48:21,363 | INFO     | 
[2025-07-27 23:48:40] 2025-07-27 21:48:21,364 | INFO     | job summary report
[2025-07-27 23:48:40] 2025-07-27 21:48:21,364 | INFO     | --------------------------------------------------
[2025-07-27 23:48:40] 2025-07-27 21:48:21,364 | INFO     | PanDA job id: 6745388507
[2025-07-27 23:48:40] 2025-07-27 21:48:21,364 | INFO     | task id: 45743349
[2025-07-27 23:48:40] 2025-07-27 21:48:21,364 | INFO     | errors: (none)
[2025-07-27 23:48:40] 2025-07-27 21:48:21,364 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 23:48:40] 2025-07-27 21:48:21,364 | INFO     | pilot state: finished 
[2025-07-27 23:48:40] 2025-07-27 21:48:21,364 | INFO     | transexitcode: 0
[2025-07-27 23:48:40] 2025-07-27 21:48:21,364 | INFO     | exeerrorcode: 0
[2025-07-27 23:48:40] 2025-07-27 21:48:21,364 | INFO     | exeerrordiag: 
[2025-07-27 23:48:40] 2025-07-27 21:48:21,364 | INFO     | exitcode: 0
[2025-07-27 23:48:40] 2025-07-27 21:48:21,364 | INFO     | exitmsg: OK
[2025-07-27 23:48:40] 2025-07-27 21:48:21,364 | INFO     | cpuconsumptiontime: 32143 s
[2025-07-27 23:48:40] 2025-07-27 21:48:21,364 | INFO     | nevents: 400
[2025-07-27 23:48:40] 2025-07-27 21:48:21,364 | INFO     | neventsw: 0
[2025-07-27 23:48:40] 2025-07-27 21:48:21,365 | INFO     | pid: 118531
[2025-07-27 23:48:40] 2025-07-27 21:48:21,365 | INFO     | pgrp: 118531
[2025-07-27 23:48:40] 2025-07-27 21:48:21,365 | INFO     | corecount: 6
[2025-07-27 23:48:40] 2025-07-27 21:48:21,365 | INFO     | event service: False
[2025-07-27 23:48:40] 2025-07-27 21:48:21,365 | INFO     | sizes: {0: 2397368, 1: 2397510, 2: 2397772, 11: 2397800, 5660: 2424574, 5662: 2433586, 5664: 2433770, 5668: 2433964}
[2025-07-27 23:48:40] 2025-07-27 21:48:21,365 | INFO     | --------------------------------------------------
[2025-07-27 23:48:40] 2025-07-27 21:48:21,365 | INFO     | 
[2025-07-27 23:48:40] 2025-07-27 21:48:21,365 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-07-27 23:48:40] 2025-07-27 21:48:21,374 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 23:48:40] 2025-07-27 21:48:21,374 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 23:48:40] 2025-07-27 21:48:21,374 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 23:48:40] 2025-07-27 21:48:21,374 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 23:48:40] 2025-07-27 21:48:21,374 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 23:48:40] 2025-07-27 21:48:21,374 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 23:48:40] 2025-07-27 21:48:21,374 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 23:48:40] 2025-07-27 21:48:21,374 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 23:48:40] 2025-07-27 21:48:21,375 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 23:48:40] 2025-07-27 21:48:21,375 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 23:48:40] 2025-07-27 21:48:21,375 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 23:48:40] 2025-07-27 21:48:21,375 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 23:48:40] 2025-07-27 21:48:21,375 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 23:48:40] 2025-07-27 21:48:21,375 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 23:48:40] 2025-07-27 21:48:21,375 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 23:48:40] 2025-07-27 21:48:21,375 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 23:48:40] 2025-07-27 21:48:21,375 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 23:48:40] 2025-07-27 21:48:21,375 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 23:48:40] 2025-07-27 21:48:21,375 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 23:48:40] 2025-07-27 21:48:21,375 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 23:48:40] 2025-07-27 21:48:21,375 | INFO     | job 6745388507 has completed (purged errors)
[2025-07-27 23:48:40] 2025-07-27 21:48:21,375 | INFO     | overall cleanup function is called
[2025-07-27 23:48:40] 2025-07-27 21:48:22,378 | INFO     | --- collectZombieJob: --- 10, [118531]
[2025-07-27 23:48:40] 2025-07-27 21:48:22,378 | INFO     | zombie collector waiting for pid 118531
[2025-07-27 23:48:40] 2025-07-27 21:48:22,378 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 23:48:40] 2025-07-27 21:48:22,378 | INFO     | collected zombie processes
[2025-07-27 23:48:40] 2025-07-27 21:48:22,378 | INFO     | will attempt to kill all subprocesses of pid=118531
[2025-07-27 23:48:40] 2025-07-27 21:48:22,462 | INFO     | process IDs to be killed: [118531] (in reverse order)
[2025-07-27 23:48:40] 2025-07-27 21:48:22,487 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 23:48:40] 2025-07-27 21:48:22,488 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 23:48:40] 2025-07-27 21:48:22,490 | INFO     | did not find any defunct processes belonging to 118531
[2025-07-27 23:48:40] 2025-07-27 21:48:22,492 | INFO     | did not find any defunct processes belonging to 118531
[2025-07-27 23:48:40] 2025-07-27 21:48:22,492 | INFO     | ready for new job
[2025-07-27 23:48:40] 2025-07-27 21:48:22,492 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 23:48:40] 2025-07-27 21:48:22,493 | INFO     | ***************************************
[2025-07-27 23:48:40] 2025-07-27 21:48:22,493 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 23:48:40] 2025-07-27 21:48:22,493 | INFO     | ***************************************
[2025-07-27 23:48:40] 2025-07-27 21:48:22,493 | INFO     | 
[2025-07-27 23:48:40] 2025-07-27 21:48:22,494 | INFO     | architecture information:
[2025-07-27 23:48:40] 2025-07-27 21:48:22,494 | INFO     | executing command: cat /etc/os-release
[2025-07-27 23:48:40] 2025-07-27 21:48:22,500 | INFO     | cat /etc/os-release:
[2025-07-27 23:48:40] NAME="CentOS Linux"
[2025-07-27 23:48:40] VERSION="7 (Core)"
[2025-07-27 23:48:40] ID="centos"
[2025-07-27 23:48:40] ID_LIKE="rhel fedora"
[2025-07-27 23:48:40] VERSION_ID="7"
[2025-07-27 23:48:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 23:48:40] ANSI_COLOR="0;31"
[2025-07-27 23:48:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 23:48:40] HOME_URL="https://www.centos.org/"
[2025-07-27 23:48:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 23:48:40] 
[2025-07-27 23:48:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 23:48:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 23:48:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 23:48:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 23:48:40] 
[2025-07-27 23:48:40] 2025-07-27 21:48:22,500 | INFO     | ***************************************
[2025-07-27 23:48:40] 2025-07-27 21:48:23,003 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-07-27 23:48:40] 2025-07-27 21:48:23,010 | INFO     | sufficient remaining disk space (18364760064 B)
[2025-07-27 23:48:40] 2025-07-27 21:48:23,010 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 23:48:40] 2025-07-27 21:48:23,011 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 23:48:40] 2025-07-27 21:48:23,011 | INFO     | update_server=False
[2025-07-27 23:48:40] 2025-07-27 21:48:23,011 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 23:48:40] 2025-07-27 21:48:23,011 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-27 23:48:40] 2025-07-27 21:48:23,011 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 23:48:40] 2025-07-27 21:48:23,011 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 23:48:40] 2025-07-27 21:48:23,011 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 23:48:40] 2025-07-27 21:48:23,012 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 23:48:40] 2025-07-27 21:48:23,056 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 23:48:40] 2025-07-27 21:48:23,182 | INFO     | all job control threads have been joined
[2025-07-27 23:48:40] 2025-07-27 21:48:23,408 | INFO     | all data control threads have been joined
[2025-07-27 23:48:40] 2025-07-27 21:48:23,672 | INFO     | all payload control threads have been joined
[2025-07-27 23:48:40] 2025-07-27 21:48:23,762 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:48:40] 2025-07-27 21:48:23,762 | INFO     | aborting loop
[2025-07-27 23:48:40] 2025-07-27 21:48:24,016 | INFO     | [job] retrieve thread has finished
[2025-07-27 23:48:40] 2025-07-27 21:48:24,088 | INFO     | [job] validate thread has finished
[2025-07-27 23:48:40] 2025-07-27 21:48:24,188 | INFO     | [job] control thread has finished
[2025-07-27 23:48:40] 2025-07-27 21:48:24,196 | INFO     | [data] copytool_in thread has finished
[2025-07-27 23:48:40] 2025-07-27 21:48:24,196 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 23:48:40] 2025-07-27 21:48:24,404 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 23:48:40] 2025-07-27 21:48:24,413 | INFO     | [data] control thread has finished
[2025-07-27 23:48:40] 2025-07-27 21:48:24,678 | INFO     | [payload] control thread has finished
[2025-07-27 23:48:40] 2025-07-27 21:48:24,748 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 23:48:40] 2025-07-27 21:48:24,768 | INFO     | [job] job monitor thread has finished
[2025-07-27 23:48:40] 2025-07-27 21:48:25,017 | INFO     | [data] copytool_out thread has finished
[2025-07-27 23:48:40] 2025-07-27 21:48:25,174 | INFO     | [payload] validate_post thread has finished
[2025-07-27 23:48:40] 2025-07-27 21:48:25,448 | INFO     | [payload] failed_post thread has finished
[2025-07-27 23:48:40] 2025-07-27 21:48:26,005 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 23:48:40] 2025-07-27 21:48:27,010 | INFO     | [job] queue monitor thread has finished
[2025-07-27 23:48:40] 2025-07-27 21:48:27,059 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 23:48:40] 2025-07-27 21:48:33,428 | INFO     | job.realtimelogging is not enabled
[2025-07-27 23:48:40] 2025-07-27 21:48:34,429 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 23:48:40] 2025-07-27 21:48:35,529 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140516947412800)>', '<ExcThread(monitor, started 140516406576896)>']
[2025-07-27 23:48:40] 2025-07-27 21:48:36,073 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 23:48:40] 2025-07-27 21:48:36,073 | INFO     | [monitor] control thread has ended
[2025-07-27 23:48:40] 2025-07-27 21:48:40,548 | INFO     | all workflow threads have been joined
[2025-07-27 23:48:40] 2025-07-27 21:48:40,548 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 23:48:40] 2025-07-27 21:48:40,548 | INFO     | traces error code: 0
[2025-07-27 23:48:40] 2025-07-27 21:48:40,548 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 23:48:40] 2025-07-27 21:48:40,610 [wrapper] ==== pilot stdout END ====
[2025-07-27 23:48:40] 2025-07-27 21:48:40,612 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 23:48:40] 2025-07-27 21:48:40,613 [wrapper] pilotpid: 77325
[2025-07-27 23:48:40] 2025-07-27 21:48:40,614 [wrapper] Pilot exit status: 0
[2025-07-27 23:48:40] 2025-07-27 21:48:40,621 [wrapper] pandaids: 6745388507
[2025-07-27 23:48:40] 2025-07-27 21:48:40,635 [wrapper] cleanup supervisor_pilot  165731 77326
[2025-07-27 23:48:40] 2025-07-27 21:48:40,637 [wrapper] Test setup, not cleaning
[2025-07-27 23:48:40] 2025-07-27 21:48:40,638 [wrapper] apfmon messages muted
[2025-07-27 23:48:40] 2025-07-27 21:48:40,639 [wrapper] ==== wrapper stdout END ====
[2025-07-27 23:48:40] 2025-07-27 21:48:40,640 [wrapper] ==== wrapper stderr END ====
[2025-07-27 23:48:40]  *** Error codes and diagnostics ***
[2025-07-27 23:48:40]     "exeErrorCode": 0,
[2025-07-27 23:48:40]     "exeErrorDiag": "",
[2025-07-27 23:48:40]     "pilotErrorCode": 0,
[2025-07-27 23:48:40]     "pilotErrorDiag": "",
[2025-07-27 23:48:40]  *** Listing of results directory ***
[2025-07-27 23:48:40] total 349158
[2025-07-27 23:48:40] -rw-r--r-- 1 boinc boinc    530466 Jul 26 21:43 pilot3.tar.gz
[2025-07-27 23:48:40] -rw-r--r-- 1 boinc boinc      5112 Jul 26 22:04 queuedata.json
[2025-07-27 23:48:40] -rwx------ 1 boinc boinc     36292 Jul 26 22:07 runpilot2-wrapper.sh
[2025-07-27 23:48:40] -rw-r--r-- 1 boinc boinc       100 Jul 27 22:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 23:48:40] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 22:13 run_atlas
[2025-07-27 23:48:40] -rw-r--r-- 1 boinc boinc       105 Jul 27 22:13 job.xml
[2025-07-27 23:48:40] -rw-r--r-- 1 boinc boinc      6795 Jul 27 22:13 init_data.xml
[2025-07-27 23:48:40] -rw-r--r-- 2 boinc boinc 151429245 Jul 27 22:13 EVNT.45743347._002488.pool.root.1
[2025-07-27 23:48:40] -rw-r--r-- 2 boinc boinc     15095 Jul 27 22:13 start_atlas.sh
[2025-07-27 23:48:40] drwxrwx--x 2 boinc boinc         5 Jul 27 22:13 shared
[2025-07-27 23:48:40] -rw-r--r-- 2 boinc boinc    542898 Jul 27 22:13 input.tar.gz
[2025-07-27 23:48:40] -rw-r--r-- 1 boinc boinc         0 Jul 27 22:13 boinc_lockfile
[2025-07-27 23:48:40] -rw-r--r-- 1 boinc boinc      2563 Jul 27 22:13 pandaJob.out
[2025-07-27 23:48:40] -rw------- 1 boinc boinc    980125 Jul 27 22:13 agis_schedconf.cvmfs.json
[2025-07-27 23:48:40] -rw------- 1 boinc boinc   1593052 Jul 27 22:13 agis_ddmendpoints.agis.ALL.json
[2025-07-27 23:48:40] drwx------ 4 boinc boinc        20 Jul 27 22:13 pilot3
[2025-07-27 23:48:40] -rw------- 1 boinc boinc        95 Jul 27 23:47 pilot_heartbeat.json
[2025-07-27 23:48:40] -rw------- 1 boinc boinc 204237032 Jul 27 23:47 HITS.45743349._043556.pool.root.1
[2025-07-27 23:48:40] -rw------- 1 boinc boinc      1032 Jul 27 23:48 memory_monitor_summary.json
[2025-07-27 23:48:40] -rw-r--r-- 1 boinc boinc      8192 Jul 27 23:48 boinc_mmap_file
[2025-07-27 23:48:40] -rw------- 1 boinc boinc    280584 Jul 27 23:48 log.45743349._043556.job.log.tgz.1
[2025-07-27 23:48:40] -rw-r--r-- 1 boinc boinc        27 Jul 27 23:48 wrapper_checkpoint.txt
[2025-07-27 23:48:40] -rw-r--r-- 1 boinc boinc       529 Jul 27 23:48 boinc_task_state.xml
[2025-07-27 23:48:40] -rw------- 1 boinc boinc      7757 Jul 27 23:48 heartbeat.json
[2025-07-27 23:48:40] -rw------- 1 boinc boinc      4559 Jul 27 23:48 pilotlog.txt
[2025-07-27 23:48:40] -rw------- 1 boinc boinc    555932 Jul 27 23:48 log.45743349._043556.job.log.1
[2025-07-27 23:48:40] -rw-r--r-- 1 boinc boinc       620 Jul 27 23:48 runtime_log
[2025-07-27 23:48:40] -rw------- 1 boinc boinc    860160 Jul 27 23:48 result.tar.gz
[2025-07-27 23:48:40] -rw------- 1 boinc boinc       357 Jul 27 23:48 output.list
[2025-07-27 23:48:40] -rw-r--r-- 1 boinc boinc      8759 Jul 27 23:48 runtime_log.err
[2025-07-27 23:48:40] -rw------- 1 boinc boinc       658 Jul 27 23:48 qu1MDmoL0z7n9Rq4apOajLDm4fhM0noT9bVof3QYDm2N1KDmgmN8Cn.diag
[2025-07-27 23:48:40] -rw-r--r-- 1 boinc boinc     21653 Jul 27 23:48 stderr.txt
[2025-07-27 23:48:40] HITS file was successfully produced:
[2025-07-27 23:48:40] -rw------- 1 boinc boinc 204237032 Jul 27 23:47 shared/HITS.pool.root.1
[2025-07-27 23:48:40]  *** Contents of shared directory: ***
[2025-07-27 23:48:40] total 348090
[2025-07-27 23:48:40] -rw-r--r-- 2 boinc boinc 151429245 Jul 27 22:13 ATLAS.root_0
[2025-07-27 23:48:40] -rw-r--r-- 2 boinc boinc     15095 Jul 27 22:13 start_atlas.sh
[2025-07-27 23:48:40] -rw-r--r-- 2 boinc boinc    542898 Jul 27 22:13 input.tar.gz
[2025-07-27 23:48:40] -rw------- 1 boinc boinc 204237032 Jul 27 23:47 HITS.pool.root.1
[2025-07-27 23:48:40] -rw------- 1 boinc boinc    860160 Jul 27 23:48 result.tar.gz
23:48:42 (67023): run_atlas exited; CPU time 32217.651677
23:48:42 (67023): called boinc_finish(0)

</stderr_txt>
]]>

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