Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:15:02 (27879): wrapper (7.7.26015): starting
00:15:02 (27879): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 00:15:02] Arguments: --nthreads 8
[2025-07-27 00:15:02] Threads: 8
[2025-07-27 00:15:02] Checking for CVMFS
[2025-07-27 00:15:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 00:15:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 00:15:02] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 00:15:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 00:15:02] 2.11.2.0 3213 516445 243048 148799 1 188 19965484 20275200 917 130560 0 179446023 99.988 22518125 19708 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 00:15:02] CVMFS is ok
[2025-07-27 00:15:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 00:15:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 00:15:02] Further information can be found at the LHC@home message board.
[2025-07-27 00:15:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 00:15:02] Checking for apptainer binary...
[2025-07-27 00:15:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 00:15:02] Running /usr/bin/apptainer --version
[2025-07-27 00:15:02] apptainer version 1.3.2-1.el7
[2025-07-27 00:15:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 00:15:03] c-205-38.aglt2.org
[2025-07-27 00:15:03] apptainer works
[2025-07-27 00:15:03] Set ATHENA_PROC_NUMBER=8
[2025-07-27 00:15:03] Set ATHENA_CORE_NUMBER=8
[2025-07-27 00:15:03] Starting ATLAS job with PandaID=6745862412
[2025-07-27 00:15:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 01:20:56]  *** The last 200 lines of the pilot log: ***
[2025-07-27 01:20:56]  protocol_id=None
[2025-07-27 01:20:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 01:20:56]  replicas=None
[2025-07-27 01:20:56]  scope=mc23_13p6TeV
[2025-07-27 01:20:56]  status=None
[2025-07-27 01:20:56]  status_code=0
[2025-07-27 01:20:56]  storage_token=
[2025-07-27 01:20:56]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745862412/log.45758763._000067.job.log.tgz.1
[2025-07-27 01:20:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f6/9f/log.45758763._000067.job.log.tgz.1
[2025-07-27 01:20:56]  workdir=None
[2025-07-27 01:20:56] ]
[2025-07-27 01:20:56] 2025-07-27 05:20:17,794 | INFO     | transferring file log.45758763._000067.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745862412/log.45758763._000067.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 01:20:56] 2025-07-27 05:20:17,794 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745862412/log.45758763._000067.job.log.tgz.1 /tmp/boinchome/slots/0/log.45758763._000067.job
[2025-07-27 01:20:56] 2025-07-27 05:20:17,812 | INFO     | adding to output.list: log.45758763._000067.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f6/9f/log.45758763._000067.job.log.tg
[2025-07-27 01:20:56] 2025-07-27 05:20:17,813 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 01:20:56] 2025-07-27 05:20:17,813 | INFO     | summary of transferred files:
[2025-07-27 01:20:56] 2025-07-27 05:20:17,813 | INFO     |  -- lfn=log.45758763._000067.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 01:20:56] 2025-07-27 05:20:17,814 | INFO     | stage-out finished correctly
[2025-07-27 01:20:56] 2025-07-27 05:20:18,012 | WARNING  | process 5585 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 01:20:56] 2025-07-27 05:20:18,012 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745862412/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 01:20:56] 2025-07-27 05:20:18,076 | INFO     | number of running child processes to parent process 5585: 1
[2025-07-27 01:20:56] 2025-07-27 05:20:18,076 | INFO     | maximum number of monitored processes: 6
[2025-07-27 01:20:56] 2025-07-27 05:20:20,540 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 01:20:56] 2025-07-27 05:20:20,584 | INFO     | monitor loop #293: job 0:6745862412 is in state 'finished'
[2025-07-27 01:20:56] 2025-07-27 05:20:20,595 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 01:20:56] 2025-07-27 05:20:22,065 | INFO     | job 6745862412 has state=finished
[2025-07-27 01:20:56] 2025-07-27 05:20:22,066 | INFO     | preparing for final server update for job 6745862412 in state='finished'
[2025-07-27 01:20:56] 2025-07-27 05:20:22,066 | INFO     | this job has now completed (state=finished)
[2025-07-27 01:20:56] 2025-07-27 05:20:22,066 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 01:20:56] 2025-07-27 05:20:22,067 | INFO     | log transfer has been attempted: DONE
[2025-07-27 01:20:56] 2025-07-27 05:20:22,067 | INFO     | job 6745862412 has finished - writing final server update
[2025-07-27 01:20:56] 2025-07-27 05:20:22,067 | INFO     | total number of processed events: 400 (read)
[2025-07-27 01:20:56] 2025-07-27 05:20:22,068 | INFO     | executing command: lscpu
[2025-07-27 01:20:56] 2025-07-27 05:20:22,097 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 01:20:56] 2025-07-27 05:20:23,108 | INFO     | monitor loop #294: job 0:6745862412 is in state 'finished'
[2025-07-27 01:20:56] 2025-07-27 05:20:23,108 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 01:20:56] 2025-07-27 05:20:24,426 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 01:20:56] 2025-07-27 05:20:24,430 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2810.7906875
[2025-07-27 01:20:56] 2025-07-27 05:20:24,434 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745862412/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 01:20:56] 2025-07-27 05:20:24,435 | INFO     | extracted standard info from prmon json
[2025-07-27 01:20:56] 2025-07-27 05:20:24,435 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 01:20:56] 2025-07-27 05:20:24,435 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 01:20:56] 2025-07-27 05:20:24,435 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 01:20:56] 2025-07-27 05:20:24,435 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 01:20:56] 2025-07-27 05:20:24,437 | INFO     | fitting pss+swap vs Time
[2025-07-27 01:20:56] 2025-07-27 05:20:24,438 | INFO     | sum of square deviations: 57407588.0
[2025-07-27 01:20:56] 2025-07-27 05:20:24,438 | INFO     | sum of deviations: -198236153.00000006
[2025-07-27 01:20:56] 2025-07-27 05:20:24,438 | INFO     | mean x: 1753591744.0
[2025-07-27 01:20:56] 2025-07-27 05:20:24,438 | INFO     | mean y: 2565100.263157895
[2025-07-27 01:20:56] 2025-07-27 05:20:24,438 | INFO     | -- intersect: 6057954176.409694
[2025-07-27 01:20:56] 2025-07-27 05:20:24,438 | INFO     | intersect: 6057954176.409694
[2025-07-27 01:20:56] 2025-07-27 05:20:24,439 | INFO     | chi2: 0.0016451229256109925
[2025-07-27 01:20:56] 2025-07-27 05:20:24,439 | INFO     | -- intersect: 6057954176.409694
[2025-07-27 01:20:56] 2025-07-27 05:20:24,439 | INFO     | current memory leak: -3.45 B/s (using 57 data points, chi2=0.00)
[2025-07-27 01:20:56] 2025-07-27 05:20:24,439 | INFO     | could have reported an average CPU frequency of 3073 MHz (6 samples)
[2025-07-27 01:20:56] 2025-07-27 05:20:24,439 | INFO     | ..............................
[2025-07-27 01:20:56] 2025-07-27 05:20:24,440 | INFO     | . Timing measurements:
[2025-07-27 01:20:56] 2025-07-27 05:20:24,440 | INFO     | . get job = 0 s
[2025-07-27 01:20:56] 2025-07-27 05:20:24,440 | INFO     | . initial setup = 2 s
[2025-07-27 01:20:56] 2025-07-27 05:20:24,440 | INFO     | . payload setup = 4 s
[2025-07-27 01:20:56] 2025-07-27 05:20:24,440 | INFO     | . stage-in = 0 s
[2025-07-27 01:20:56] 2025-07-27 05:20:24,440 | INFO     | . payload execution = 3884 s
[2025-07-27 01:20:56] 2025-07-27 05:20:24,440 | INFO     | . stage-out = 0 s
[2025-07-27 01:20:56] 2025-07-27 05:20:24,440 | INFO     | . log creation = 0 s
[2025-07-27 01:20:56] 2025-07-27 05:20:24,440 | INFO     | ..............................
[2025-07-27 01:20:56] 2025-07-27 05:20:24,519 | INFO     | 
[2025-07-27 01:20:56] 2025-07-27 05:20:24,519 | INFO     | job summary report
[2025-07-27 01:20:56] 2025-07-27 05:20:24,519 | INFO     | --------------------------------------------------
[2025-07-27 01:20:56] 2025-07-27 05:20:24,519 | INFO     | PanDA job id: 6745862412
[2025-07-27 01:20:56] 2025-07-27 05:20:24,519 | INFO     | task id: 45758763
[2025-07-27 01:20:56] 2025-07-27 05:20:24,520 | INFO     | errors: (none)
[2025-07-27 01:20:56] 2025-07-27 05:20:24,520 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 01:20:56] 2025-07-27 05:20:24,520 | INFO     | pilot state: finished 
[2025-07-27 01:20:56] 2025-07-27 05:20:24,520 | INFO     | transexitcode: 0
[2025-07-27 01:20:56] 2025-07-27 05:20:24,520 | INFO     | exeerrorcode: 0
[2025-07-27 01:20:56] 2025-07-27 05:20:24,520 | INFO     | exeerrordiag: 
[2025-07-27 01:20:56] 2025-07-27 05:20:24,520 | INFO     | exitcode: 0
[2025-07-27 01:20:56] 2025-07-27 05:20:24,520 | INFO     | exitmsg: OK
[2025-07-27 01:20:56] 2025-07-27 05:20:24,520 | INFO     | cpuconsumptiontime: 28706 s
[2025-07-27 01:20:56] 2025-07-27 05:20:24,521 | INFO     | nevents: 400
[2025-07-27 01:20:56] 2025-07-27 05:20:24,521 | INFO     | neventsw: 0
[2025-07-27 01:20:56] 2025-07-27 05:20:24,521 | INFO     | pid: 5585
[2025-07-27 01:20:56] 2025-07-27 05:20:24,521 | INFO     | pgrp: 5585
[2025-07-27 01:20:56] 2025-07-27 05:20:24,521 | INFO     | corecount: 8
[2025-07-27 01:20:56] 2025-07-27 05:20:24,521 | INFO     | event service: False
[2025-07-27 01:20:56] 2025-07-27 05:20:24,521 | INFO     | sizes: {0: 2397230, 1: 2397485, 3: 2397747, 12: 2397775, 3891: 2423691, 3892: 2423690, 3893: 2432872, 3896: 2432928, 3900: 2433122}
[2025-07-27 01:20:56] 2025-07-27 05:20:24,521 | INFO     | --------------------------------------------------
[2025-07-27 01:20:56] 2025-07-27 05:20:24,521 | INFO     | 
[2025-07-27 01:20:56] 2025-07-27 05:20:24,522 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 01:20:56] 2025-07-27 05:20:24,541 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 01:20:56] 2025-07-27 05:20:24,541 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 01:20:56] 2025-07-27 05:20:24,541 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 01:20:56] 2025-07-27 05:20:24,541 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 01:20:56] 2025-07-27 05:20:24,542 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 01:20:56] 2025-07-27 05:20:24,542 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 01:20:56] 2025-07-27 05:20:24,542 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 01:20:56] 2025-07-27 05:20:24,542 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 01:20:56] 2025-07-27 05:20:24,542 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 01:20:56] 2025-07-27 05:20:24,542 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 01:20:56] 2025-07-27 05:20:24,542 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 01:20:56] 2025-07-27 05:20:24,542 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 01:20:56] 2025-07-27 05:20:24,542 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 01:20:56] 2025-07-27 05:20:24,542 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 01:20:56] 2025-07-27 05:20:24,543 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 01:20:56] 2025-07-27 05:20:24,543 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 01:20:56] 2025-07-27 05:20:24,543 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 01:20:56] 2025-07-27 05:20:24,543 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 01:20:56] 2025-07-27 05:20:24,543 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 01:20:56] 2025-07-27 05:20:24,543 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 01:20:56] 2025-07-27 05:20:24,543 | INFO     | job 6745862412 has completed (purged errors)
[2025-07-27 01:20:56] 2025-07-27 05:20:24,544 | INFO     | overall cleanup function is called
[2025-07-27 01:20:56] 2025-07-27 05:20:25,551 | INFO     | --- collectZombieJob: --- 10, [5585]
[2025-07-27 01:20:56] 2025-07-27 05:20:25,551 | INFO     | zombie collector waiting for pid 5585
[2025-07-27 01:20:56] 2025-07-27 05:20:25,552 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 01:20:56] 2025-07-27 05:20:25,552 | INFO     | collected zombie processes
[2025-07-27 01:20:56] 2025-07-27 05:20:25,552 | INFO     | will attempt to kill all subprocesses of pid=5585
[2025-07-27 01:20:56] 2025-07-27 05:20:25,645 | INFO     | process IDs to be killed: [5585] (in reverse order)
[2025-07-27 01:20:56] 2025-07-27 05:20:25,693 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 01:20:56] 2025-07-27 05:20:25,694 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 01:20:56] 2025-07-27 05:20:25,697 | INFO     | did not find any defunct processes belonging to 5585
[2025-07-27 01:20:56] 2025-07-27 05:20:25,699 | INFO     | did not find any defunct processes belonging to 5585
[2025-07-27 01:20:56] 2025-07-27 05:20:25,700 | INFO     | ready for new job
[2025-07-27 01:20:56] 2025-07-27 05:20:25,700 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 01:20:56] 2025-07-27 05:20:25,701 | INFO     | ***************************************
[2025-07-27 01:20:56] 2025-07-27 05:20:25,702 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 01:20:56] 2025-07-27 05:20:25,702 | INFO     | ***************************************
[2025-07-27 01:20:56] 2025-07-27 05:20:25,702 | INFO     | 
[2025-07-27 01:20:56] 2025-07-27 05:20:25,703 | INFO     | architecture information:
[2025-07-27 01:20:56] 2025-07-27 05:20:25,703 | INFO     | executing command: cat /etc/os-release
[2025-07-27 01:20:56] 2025-07-27 05:20:25,717 | INFO     | cat /etc/os-release:
[2025-07-27 01:20:56] NAME="CentOS Linux"
[2025-07-27 01:20:56] VERSION="7 (Core)"
[2025-07-27 01:20:56] ID="centos"
[2025-07-27 01:20:56] ID_LIKE="rhel fedora"
[2025-07-27 01:20:56] VERSION_ID="7"
[2025-07-27 01:20:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 01:20:56] ANSI_COLOR="0;31"
[2025-07-27 01:20:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 01:20:56] HOME_URL="https://www.centos.org/"
[2025-07-27 01:20:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 01:20:56] 
[2025-07-27 01:20:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 01:20:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 01:20:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 01:20:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 01:20:56] 
[2025-07-27 01:20:56] 2025-07-27 05:20:25,717 | INFO     | ***************************************
[2025-07-27 01:20:56] 2025-07-27 05:20:26,221 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 01:20:56] 2025-07-27 05:20:26,236 | INFO     | sufficient remaining disk space (32820428800 B)
[2025-07-27 01:20:56] 2025-07-27 05:20:26,237 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 01:20:56] 2025-07-27 05:20:26,237 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 01:20:56] 2025-07-27 05:20:26,237 | INFO     | update_server=False
[2025-07-27 01:20:56] 2025-07-27 05:20:26,237 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 01:20:56] 2025-07-27 05:20:26,237 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 01:20:56] 2025-07-27 05:20:26,237 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 01:20:56] 2025-07-27 05:20:26,360 | INFO     | all data control threads have been joined
[2025-07-27 01:20:56] 2025-07-27 05:20:26,617 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 01:20:56] 2025-07-27 05:20:26,617 | INFO     | aborting loop
[2025-07-27 01:20:56] 2025-07-27 05:20:26,628 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 01:20:56] 2025-07-27 05:20:27,241 | INFO     | [job] retrieve thread has finished
[2025-07-27 01:20:56] 2025-07-27 05:20:27,243 | INFO     | [job] queue monitor thread has finished
[2025-07-27 01:20:56] 2025-07-27 05:20:27,275 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 01:20:56] 2025-07-27 05:20:27,365 | INFO     | [data] control thread has finished
[2025-07-27 01:20:56] 2025-07-27 05:20:27,411 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 01:20:56] 2025-07-27 05:20:27,599 | INFO     | all job control threads have been joined
[2025-07-27 01:20:56] 2025-07-27 05:20:27,599 | INFO     | all payload control threads have been joined
[2025-07-27 01:20:56] 2025-07-27 05:20:27,622 | INFO     | [job] job monitor thread has finished
[2025-07-27 01:20:56] 2025-07-27 05:20:28,040 | INFO     | [payload] failed_post thread has finished
[2025-07-27 01:20:56] 2025-07-27 05:20:28,242 | INFO     | [data] copytool_out thread has finished
[2025-07-27 01:20:56] 2025-07-27 05:20:28,354 | INFO     | [job] validate thread has finished
[2025-07-27 01:20:56] 2025-07-27 05:20:28,481 | INFO     | [data] copytool_in thread has finished
[2025-07-27 01:20:56] 2025-07-27 05:20:28,601 | INFO     | [payload] control thread has finished
[2025-07-27 01:20:56] 2025-07-27 05:20:28,602 | INFO     | [job] control thread has finished
[2025-07-27 01:20:56] 2025-07-27 05:20:28,626 | INFO     | [payload] validate_post thread has finished
[2025-07-27 01:20:56] 2025-07-27 05:20:28,736 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 01:20:56] 2025-07-27 05:20:30,633 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 01:20:56] 2025-07-27 05:20:36,692 | INFO     | job.realtimelogging is not enabled
[2025-07-27 01:20:56] 2025-07-27 05:20:37,697 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 01:20:56] 2025-07-27 05:20:37,883 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140418332899136)>', '<ExcThread(monitor, started 140417907549952)>']
[2025-07-27 01:20:56] 2025-07-27 05:20:42,908 | INFO     | all workflow threads have been joined
[2025-07-27 01:20:56] 2025-07-27 05:20:42,908 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 01:20:56] 2025-07-27 05:20:42,909 | INFO     | traces error code: 0
[2025-07-27 01:20:56] 2025-07-27 05:20:42,909 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 01:20:56] 2025-07-27 05:20:55,840 | INFO     | PID=31488 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 01:20:56] 2025-07-27 05:20:55,840 | INFO     | .. there are 2 such processes running
[2025-07-27 01:20:56] 2025-07-27 05:20:55,840 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 01:20:56] 2025-07-27 05:20:55,840 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 01:20:56] 2025-07-27 05:20:55,840 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 01:20:56] 2025-07-27 05:20:55,840 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 01:20:56] 2025-07-27 05:20:55,840 | INFO     | [monitor] control thread has ended
[2025-07-27 01:20:56] 2025-07-27 05:20:55,933 [wrapper] ==== pilot stdout END ====
[2025-07-27 01:20:56] 2025-07-27 05:20:55,936 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 01:20:56] 2025-07-27 05:20:55,939 [wrapper] pilotpid: 31488
[2025-07-27 01:20:56] 2025-07-27 05:20:55,942 [wrapper] Pilot exit status: 0
[2025-07-27 01:20:56] 2025-07-27 05:20:55,952 [wrapper] pandaids: 6745862412
[2025-07-27 01:20:56] 2025-07-27 05:20:55,983 [wrapper] cleanup supervisor_pilot 16562 31489
[2025-07-27 01:20:56] 2025-07-27 05:20:55,986 [wrapper] Test setup, not cleaning
[2025-07-27 01:20:56] 2025-07-27 05:20:55,989 [wrapper] apfmon messages muted
[2025-07-27 01:20:56] 2025-07-27 05:20:55,992 [wrapper] ==== wrapper stdout END ====
[2025-07-27 01:20:56] 2025-07-27 05:20:55,994 [wrapper] ==== wrapper stderr END ====
[2025-07-27 01:20:56]  *** Error codes and diagnostics ***
[2025-07-27 01:20:56]     "exeErrorCode": 0,
[2025-07-27 01:20:56]     "exeErrorDiag": "",
[2025-07-27 01:20:56]     "pilotErrorCode": 0,
[2025-07-27 01:20:56]     "pilotErrorDiag": "",
[2025-07-27 01:20:56]  *** Listing of results directory ***
[2025-07-27 01:20:56] total 407572
[2025-07-27 01:20:56] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 18:38 pilot3.tar.gz
[2025-07-27 01:20:56] -rwx------ 1 boincer umatlas     36292 Jul 26 19:03 runpilot2-wrapper.sh
[2025-07-27 01:20:56] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 19:03 queuedata.json
[2025-07-27 01:20:56] -rw-r--r-- 1 boincer umatlas       100 Jul 27 00:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 01:20:56] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 00:15 run_atlas
[2025-07-27 01:20:56] -rw-r--r-- 1 boincer umatlas       105 Jul 27 00:15 job.xml
[2025-07-27 01:20:56] -rw-r--r-- 2 boincer umatlas 242039500 Jul 27 00:15 EVNT.45758761._000003.pool.root.1
[2025-07-27 01:20:56] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 00:15 start_atlas.sh
[2025-07-27 01:20:56] drwxrwx--x 2 boincer umatlas      4096 Jul 27 00:15 shared
[2025-07-27 01:20:56] -rw-r--r-- 2 boincer umatlas    542875 Jul 27 00:15 input.tar.gz
[2025-07-27 01:20:56] -rw-r--r-- 1 boincer umatlas         0 Jul 27 00:15 boinc_lockfile
[2025-07-27 01:20:56] -rw-r--r-- 1 boincer umatlas      2550 Jul 27 00:15 pandaJob.out
[2025-07-27 01:20:56] -rw------- 1 boincer umatlas    980125 Jul 27 00:15 agis_schedconf.cvmfs.json
[2025-07-27 01:20:56] -rw------- 1 boincer umatlas   1593052 Jul 27 00:15 agis_ddmendpoints.agis.ALL.json
[2025-07-27 01:20:56] drwx------ 4 boincer umatlas      4096 Jul 27 00:15 pilot3
[2025-07-27 01:20:56] -rw-r--r-- 1 boincer umatlas      6050 Jul 27 01:18 init_data.xml
[2025-07-27 01:20:56] -rw------- 1 boincer umatlas 170039379 Jul 27 01:19 HITS.45758763._000067.pool.root.1
[2025-07-27 01:20:56] -rw------- 1 boincer umatlas      1045 Jul 27 01:20 memory_monitor_summary.json
[2025-07-27 01:20:56] -rw-r--r-- 1 boincer umatlas       529 Jul 27 01:20 boinc_task_state.xml
[2025-07-27 01:20:56] -rw------- 1 boincer umatlas    303775 Jul 27 01:20 log.45758763._000067.job.log.tgz.1
[2025-07-27 01:20:56] -rw------- 1 boincer umatlas      7815 Jul 27 01:20 heartbeat.json
[2025-07-27 01:20:56] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 01:20 boinc_mmap_file
[2025-07-27 01:20:56] -rw-r--r-- 1 boincer umatlas        27 Jul 27 01:20 wrapper_checkpoint.txt
[2025-07-27 01:20:56] -rw------- 1 boincer umatlas       820 Jul 27 01:20 pilotlog.txt
[2025-07-27 01:20:56] -rw------- 1 boincer umatlas        95 Jul 27 01:20 pilot_heartbeat.json
[2025-07-27 01:20:56] -rw------- 1 boincer umatlas    398189 Jul 27 01:20 log.45758763._000067.job.log.1
[2025-07-27 01:20:56] -rw------- 1 boincer umatlas       357 Jul 27 01:20 output.list
[2025-07-27 01:20:56] -rw-r--r-- 1 boincer umatlas       620 Jul 27 01:20 runtime_log
[2025-07-27 01:20:56] -rw------- 1 boincer umatlas    716800 Jul 27 01:20 result.tar.gz
[2025-07-27 01:20:56] -rw-r--r-- 1 boincer umatlas      8660 Jul 27 01:20 runtime_log.err
[2025-07-27 01:20:56] -rw------- 1 boincer umatlas       657 Jul 27 01:20 RB9LDmp62z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmea1KDmNuoFKm.diag
[2025-07-27 01:20:56] -rw-r--r-- 1 boincer umatlas     21802 Jul 27 01:20 stderr.txt
[2025-07-27 01:20:56] HITS file was successfully produced:
[2025-07-27 01:20:56] -rw------- 1 boincer umatlas 170039379 Jul 27 01:19 shared/HITS.pool.root.1
[2025-07-27 01:20:56]  *** Contents of shared directory: ***
[2025-07-27 01:20:56] total 403676
[2025-07-27 01:20:56] -rw-r--r-- 2 boincer umatlas 242039500 Jul 27 00:15 ATLAS.root_0
[2025-07-27 01:20:56] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 00:15 start_atlas.sh
[2025-07-27 01:20:56] -rw-r--r-- 2 boincer umatlas    542875 Jul 27 00:15 input.tar.gz
[2025-07-27 01:20:56] -rw------- 1 boincer umatlas 170039379 Jul 27 01:19 HITS.pool.root.1
[2025-07-27 01:20:56] -rw------- 1 boincer umatlas    716800 Jul 27 01:20 result.tar.gz
01:20:57 (27879): run_atlas exited; CPU time 28682.181105
01:20:57 (27879): called boinc_finish(0)

</stderr_txt>
]]>

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