Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:20:55 (2000468): wrapper (7.7.26015): starting
21:20:55 (2000468): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 21:20:55] Arguments: --nthreads 12
[2025-07-26 21:20:55] Threads: 12
[2025-07-26 21:20:55] Checking for CVMFS
[2025-07-26 21:20:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 21:20:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 21:20:55] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 21:20:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 21:20:56] 2.11.3.0 1989253 43466 167736 148799 1 311 42365676 45568000 16317 130560 0 504465565 99.776 353369550 18069 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-26 21:20:56] CVMFS is ok
[2025-07-26 21:20:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 21:20:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 21:20:56] Further information can be found at the LHC@home message board.
[2025-07-26 21:20:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 21:20:56] Checking for apptainer binary...
[2025-07-26 21:20:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 21:20:56] Running /usr/bin/apptainer --version
[2025-07-26 21:20:56] apptainer version 1.3.3-1.el9
[2025-07-26 21:20:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 21:20:56] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0169.triumf.lcg
[2025-07-26 21:20:56] apptainer works
[2025-07-26 21:20:56] Set ATHENA_PROC_NUMBER=12
[2025-07-26 21:20:56] Set ATHENA_CORE_NUMBER=12
[2025-07-26 21:20:57] Starting ATLAS job with PandaID=6745948332
[2025-07-26 21:20:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 21:25:59]  *** The last 200 lines of the pilot log: ***
[2025-07-26 21:25:59] 2025-07-27 04:25:24,740 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 21:25:59] 2025-07-27 04:25:24,740 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | WARNING  | wrong length of table data, x=[1753590144.0], y=[536.0] (must be same and length>=4)
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | could have reported an average CPU frequency of 2808 MHz (4 samples)
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | ..............................
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | . Timing measurements:
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | . get job = 0 s
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | . initial setup = 5 s
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | . payload setup = 10 s
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | . stage-in = 0 s
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | . payload execution = 45 s
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | . stage-out = 0 s
[2025-07-26 21:25:59] 2025-07-27 04:25:24,742 | INFO     | . log creation = 0 s
[2025-07-26 21:25:59] 2025-07-27 04:25:24,742 | INFO     | ..............................
[2025-07-26 21:25:59] 2025-07-27 04:25:24,742 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 21:25:59] 2025-07-27 04:25:24,742 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745948332/pilotlog.txt
[2025-07-26 21:25:59] 2025-07-27 04:25:24,788 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-26 21:25:59] - Log from pilotlog.txt -
[2025-07-26 21:25:59] 2025-07-27 04:25:24,734 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745948332/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 21:25:59] 2025-07-27 04:25:24,738 | INFO     | extracted standard info from prmon json
[2025-07-26 21:25:59] 2025-07-27 04:25:24,738 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 21:25:59] 2025-07-27 04:25:24,739 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 21:25:59] 2025-07-27 04:25:24,740 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 21:25:59] 2025-07-27 04:25:24,740 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | WARNING  | wrong length of table data, x=[1753590144.0], y=[536.0] (must be same and length>=4)
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | could have reported an average CPU frequency of 2808 MHz (4 samples)
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | ..............................
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | . Timing measurements:
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | . get job = 0 s
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | . initial setup = 5 s
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | . payload setup = 10 s
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | . stage-in = 0 s
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | . payload execution = 45 s
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | . stage-out = 0 s
[2025-07-26 21:25:59] 2025-07-27 04:25:24,742 | INFO     | . log creation = 0 s
[2025-07-26 21:25:59] 2025-07-27 04:25:24,742 | INFO     | ..............................
[2025-07-26 21:25:59] 2025-07-27 04:25:24,742 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 21:25:59] 2025-07-27 04:25:24,742 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745948332/pilotlog.txt
[2025-07-26 21:25:59] 2025-07-27 04:25:24,788 | WARNING  | 
[2025-07-26 21:25:59] [begin log extracts]
[2025-07-26 21:25:59] - Log from pilotlog.txt -
[2025-07-26 21:25:59] 2025-07-27 04:25:24,734 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745948332/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 21:25:59] 2025-07-27 04:25:24,738 | INFO     | extracted standard info from prmon json
[2025-07-26 21:25:59] 2025-07-27 04:25:24,738 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 21:25:59] 2025-07-27 04:25:24,739 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 21:25:59] 2025-07-27 04:25:24,740 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 21:25:59] 2025-07-27 04:25:24,740 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | WARNING  | wrong length of table data, x=[1753590144.0], y=[536.0] (must be same and length>=4)
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | could have reported an average CPU frequency of 2808 MHz (4 samples)
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | ..............................
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | . Timing measurements:
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | . get job = 0 s
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | . initial setup = 5 s
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | . payload setup = 10 s
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | . stage-in = 0 s
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | . payload execution = 45 s
[2025-07-26 21:25:59] 2025-07-27 04:25:24,741 | INFO     | . stage-out = 0 s
[2025-07-26 21:25:59] 2025-07-27 04:25:24,742 | INFO     | . log creation = 0 s
[2025-07-26 21:25:59] 2025-07-27 04:25:24,742 | INFO     | ..............................
[2025-07-26 21:25:59] 2025-07-27 04:25:24,742 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 21:25:59] 2025-07-27 04:25:24,742 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745948332/pilotlog.txt
[2025-07-26 21:25:59] [end log extracts]
[2025-07-26 21:25:59] 2025-07-27 04:25:24,788 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-26 21:25:59] 2025-07-27 04:25:24,789 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-26 21:25:59] 2025-07-27 04:25:25,213 | INFO     | 
[2025-07-26 21:25:59] 2025-07-27 04:25:25,213 | INFO     | job summary report
[2025-07-26 21:25:59] 2025-07-27 04:25:25,213 | INFO     | --------------------------------------------------
[2025-07-26 21:25:59] 2025-07-27 04:25:25,213 | INFO     | PanDA job id: 6745948332
[2025-07-26 21:25:59] 2025-07-27 04:25:25,213 | INFO     | task id: 45759912
[2025-07-26 21:25:59] 2025-07-27 04:25:25,213 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-26 21:22:49,386 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-26 21:25:59] 2025-07-27 04:25:25,213 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 21:25:59] 2025-07-27 04:25:25,213 | INFO     | pilot state: failed 
[2025-07-26 21:25:59] 2025-07-27 04:25:25,213 | INFO     | transexitcode: 65
[2025-07-26 21:25:59] 2025-07-27 04:25:25,213 | INFO     | exeerrorcode: 65
[2025-07-26 21:25:59] 2025-07-27 04:25:25,213 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-26 21:25:59] 2025-07-27 04:25:25,214 | INFO     | exitcode: 65
[2025-07-26 21:25:59] 2025-07-27 04:25:25,214 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-26 21:25:59] 2025-07-27 04:25:25,214 | INFO     | cpuconsumptiontime: 13 s
[2025-07-26 21:25:59] 2025-07-27 04:25:25,214 | INFO     | nevents: 0
[2025-07-26 21:25:59] 2025-07-27 04:25:25,214 | INFO     | neventsw: 0
[2025-07-26 21:25:59] 2025-07-27 04:25:25,214 | INFO     | pid: 2010376
[2025-07-26 21:25:59] 2025-07-27 04:25:25,214 | INFO     | pgrp: 2010376
[2025-07-26 21:25:59] 2025-07-27 04:25:25,214 | INFO     | corecount: 12
[2025-07-26 21:25:59] 2025-07-27 04:25:25,214 | INFO     | event service: False
[2025-07-26 21:25:59] 2025-07-27 04:25:25,214 | INFO     | sizes: {0: 2397344, 1: 2397486, 10: 2397748, 12: 2397776, 59: 2421088, 61: 2425380, 64: 2425536, 201: 2425730}
[2025-07-26 21:25:59] 2025-07-27 04:25:25,214 | INFO     | --------------------------------------------------
[2025-07-26 21:25:59] 2025-07-27 04:25:25,214 | INFO     | 
[2025-07-26 21:25:59] 2025-07-27 04:25:25,214 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-26 21:25:59] 2025-07-27 04:25:25,303 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 21:25:59] 2025-07-27 04:25:25,303 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 21:25:59] 2025-07-27 04:25:25,303 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 21:25:59] 2025-07-27 04:25:25,304 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 21:25:59] 2025-07-27 04:25:25,304 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 21:25:59] 2025-07-27 04:25:25,304 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 21:25:59] 2025-07-27 04:25:25,304 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 21:25:59] 2025-07-27 04:25:25,304 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 21:25:59] 2025-07-27 04:25:25,304 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 21:25:59] 2025-07-27 04:25:25,304 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 21:25:59] 2025-07-27 04:25:25,304 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 21:25:59] 2025-07-27 04:25:25,304 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 21:25:59] 2025-07-27 04:25:25,304 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 21:25:59] 2025-07-27 04:25:25,304 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 21:25:59] 2025-07-27 04:25:25,304 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 21:25:59] 2025-07-27 04:25:25,304 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 21:25:59] 2025-07-27 04:25:25,304 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 21:25:59] 2025-07-27 04:25:25,304 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 21:25:59] 2025-07-27 04:25:25,304 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 21:25:59] 2025-07-27 04:25:25,304 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 21:25:59] 2025-07-27 04:25:25,304 | INFO     | job 6745948332 has completed (purged errors)
[2025-07-26 21:25:59] 2025-07-27 04:25:25,304 | INFO     | overall cleanup function is called
[2025-07-26 21:25:59] 2025-07-27 04:25:26,311 | INFO     | --- collectZombieJob: --- 10, [2010376]
[2025-07-26 21:25:59] 2025-07-27 04:25:26,311 | INFO     | zombie collector waiting for pid 2010376
[2025-07-26 21:25:59] 2025-07-27 04:25:26,311 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 21:25:59] 2025-07-27 04:25:26,311 | INFO     | collected zombie processes
[2025-07-26 21:25:59] 2025-07-27 04:25:26,311 | INFO     | will attempt to kill all subprocesses of pid=2010376
[2025-07-26 21:25:59] 2025-07-27 04:25:27,224 | INFO     | process IDs to be killed: [2010376] (in reverse order)
[2025-07-26 21:25:59] 2025-07-27 04:25:27,590 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 21:25:59] 2025-07-27 04:25:27,590 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 21:25:59] 2025-07-27 04:25:27,615 | INFO     | did not find any defunct processes belonging to 2010376
[2025-07-26 21:25:59] 2025-07-27 04:25:27,658 | INFO     | did not find any defunct processes belonging to 2010376
[2025-07-26 21:25:59] 2025-07-27 04:25:27,658 | INFO     | ready for new job
[2025-07-26 21:25:59] 2025-07-27 04:25:27,658 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 21:25:59] 2025-07-27 04:25:27,674 | INFO     | ***************************************
[2025-07-26 21:25:59] 2025-07-27 04:25:27,675 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 21:25:59] 2025-07-27 04:25:27,675 | INFO     | ***************************************
[2025-07-26 21:25:59] 2025-07-27 04:25:27,675 | INFO     | 
[2025-07-26 21:25:59] 2025-07-27 04:25:27,690 | INFO     | architecture information:
[2025-07-26 21:25:59] 2025-07-27 04:25:27,718 | INFO     | executing command: cat /etc/os-release
[2025-07-26 21:25:59] 2025-07-27 04:25:27,819 | INFO     | cat /etc/os-release:
[2025-07-26 21:25:59] NAME="CentOS Linux"
[2025-07-26 21:25:59] VERSION="7 (Core)"
[2025-07-26 21:25:59] ID="centos"
[2025-07-26 21:25:59] ID_LIKE="rhel fedora"
[2025-07-26 21:25:59] VERSION_ID="7"
[2025-07-26 21:25:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 21:25:59] ANSI_COLOR="0;31"
[2025-07-26 21:25:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 21:25:59] HOME_URL="https://www.centos.org/"
[2025-07-26 21:25:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 21:25:59] 
[2025-07-26 21:25:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 21:25:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 21:25:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 21:25:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 21:25:59] 
[2025-07-26 21:25:59] 2025-07-27 04:25:27,819 | INFO     | ***************************************
[2025-07-26 21:25:59] 2025-07-27 04:25:28,323 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-26 21:25:59] 2025-07-27 04:25:28,420 | INFO     | sufficient remaining disk space (2571460673536 B)
[2025-07-26 21:25:59] 2025-07-27 04:25:28,420 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 21:25:59] 2025-07-27 04:25:28,420 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 21:25:59] 2025-07-27 04:25:28,420 | INFO     | update_server=False
[2025-07-26 21:25:59] 2025-07-27 04:25:28,421 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 21:25:59] 2025-07-27 04:25:28,422 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 21:25:59] 2025-07-27 04:25:28,893 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 21:25:59] 2025-07-27 04:25:28,893 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 21:25:59] 2025-07-27 04:25:28,893 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 21:25:59] 2025-07-27 04:25:28,893 | INFO     | will abort loop
[2025-07-26 21:25:59] 2025-07-27 04:25:28,951 | INFO     | all data control threads have been joined
[2025-07-26 21:25:59] 2025-07-27 04:25:29,052 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 21:25:59] 2025-07-27 04:25:29,426 | INFO     | [job] retrieve thread has finished
[2025-07-26 21:25:59] 2025-07-27 04:25:29,774 | INFO     | all payload control threads have been joined
[2025-07-26 21:25:59] 2025-07-27 04:25:29,830 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 21:25:59] 2025-07-27 04:25:29,847 | INFO     | [data] copytool_in thread has finished
[2025-07-26 21:25:59] 2025-07-27 04:25:29,875 | INFO     | all job control threads have been joined
[2025-07-26 21:25:59] 2025-07-27 04:25:29,899 | INFO     | [job] job monitor thread has finished
[2025-07-26 21:25:59] 2025-07-27 04:25:29,957 | INFO     | [data] control thread has finished
[2025-07-26 21:25:59] 2025-07-27 04:25:30,245 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 21:25:59] 2025-07-27 04:25:30,273 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 21:25:59] 2025-07-27 04:25:30,357 | INFO     | [payload] failed_post thread has finished
[2025-07-26 21:25:59] 2025-07-27 04:25:30,435 | INFO     | [data] copytool_out thread has finished
[2025-07-26 21:25:59] 2025-07-27 04:25:30,472 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 21:25:59] 2025-07-27 04:25:30,484 | INFO     | [job] validate thread has finished
[2025-07-26 21:25:59] 2025-07-27 04:25:30,759 | INFO     | [payload] validate_post thread has finished
[2025-07-26 21:25:59] 2025-07-27 04:25:30,780 | INFO     | [payload] control thread has finished
[2025-07-26 21:25:59] 2025-07-27 04:25:30,863 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 21:25:59] 2025-07-27 04:25:30,881 | INFO     | [job] control thread has finished
[2025-07-26 21:25:59] 2025-07-27 04:25:31,251 | INFO     | [job] queue monitor thread has finished
[2025-07-26 21:25:59] 2025-07-27 04:25:33,067 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 21:25:59] 2025-07-27 04:25:33,323 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139940302370624)>', '<ExcThread(monitor, started 139939580712704)>']
[2025-07-26 21:25:59] 2025-07-27 04:25:38,349 | INFO     | all workflow threads have been joined
[2025-07-26 21:25:59] 2025-07-27 04:25:38,349 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 21:25:59] 2025-07-27 04:25:38,349 | INFO     | traces error code: 0
[2025-07-26 21:25:59] 2025-07-27 04:25:38,349 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 21:25:59] 2025-07-27 04:25:58,585 | INFO     | PID=2004054 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 21:25:59] 2025-07-27 04:25:58,585 | INFO     | .. there are 28 such processes running
[2025-07-26 21:25:59] 2025-07-27 04:25:58,593 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 21:25:59] 2025-07-27 04:25:58,593 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 21:25:59] 2025-07-27 04:25:58,593 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 21:25:59] 2025-07-27 04:25:58,593 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 21:25:59] 2025-07-27 04:25:58,593 | INFO     | [monitor] control thread has ended
[2025-07-26 21:25:59] 2025-07-27 04:25:59,212 [wrapper] ==== pilot stdout END ====
[2025-07-26 21:25:59] 2025-07-27 04:25:59,227 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 21:25:59] 2025-07-27 04:25:59,247 [wrapper] pilotpid: 2004054
[2025-07-26 21:25:59] 2025-07-27 04:25:59,264 [wrapper] Pilot exit status: 0
[2025-07-26 21:25:59] 2025-07-27 04:25:59,329 [wrapper] pandaids: 6745948332
[2025-07-26 21:25:59] 2025-07-27 04:25:59,370 [wrapper] cleanup supervisor_pilot 2004060 2004055
[2025-07-26 21:25:59] 2025-07-27 04:25:59,371 [wrapper] Test setup, not cleaning
[2025-07-26 21:25:59] 2025-07-27 04:25:59,374 [wrapper] apfmon messages muted
[2025-07-26 21:25:59] 2025-07-27 04:25:59,376 [wrapper] ==== wrapper stdout END ====
[2025-07-26 21:25:59] 2025-07-27 04:25:59,377 [wrapper] ==== wrapper stderr END ====
[2025-07-26 21:25:59]  *** Error codes and diagnostics ***
[2025-07-26 21:25:59]     "exeErrorCode": 65,
[2025-07-26 21:25:59]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-26 21:25:59]     "pilotErrorCode": 1305,
[2025-07-26 21:25:59]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-26 21:25:59]  *** Listing of results directory ***
[2025-07-26 21:25:59] total 232996
[2025-07-26 21:25:59] -rw-r--r--. 1 boinc boinc    530466 Jul 26 18:40 pilot3.tar.gz
[2025-07-26 21:25:59] -rwx------. 1 boinc boinc     36292 Jul 26 18:46 runpilot2-wrapper.sh
[2025-07-26 21:25:59] -rw-r--r--. 1 boinc boinc      5112 Jul 26 18:46 queuedata.json
[2025-07-26 21:25:59] -rw-r--r--. 1 boinc boinc       100 Jul 26 21:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 21:25:59] -rwxr-xr-x. 1 boinc boinc      7986 Jul 26 21:20 run_atlas
[2025-07-26 21:25:59] -rw-r--r--. 1 boinc boinc       105 Jul 26 21:20 job.xml
[2025-07-26 21:25:59] -rw-r--r--. 2 boinc boinc 234506750 Jul 26 21:20 EVNT.45759910._000002.pool.root.1
[2025-07-26 21:25:59] -rw-r--r--. 2 boinc boinc     15095 Jul 26 21:20 start_atlas.sh
[2025-07-26 21:25:59] drwxrwx--x. 2 boinc boinc      4096 Jul 26 21:20 shared
[2025-07-26 21:25:59] -rw-r--r--. 2 boinc boinc    542869 Jul 26 21:20 input.tar.gz
[2025-07-26 21:25:59] -rw-r--r--. 1 boinc boinc      6611 Jul 26 21:20 init_data.xml
[2025-07-26 21:25:59] -rw-r--r--. 1 boinc boinc         0 Jul 26 21:20 boinc_lockfile
[2025-07-26 21:25:59] -rw-r--r--. 1 boinc boinc      2554 Jul 26 21:20 pandaJob.out
[2025-07-26 21:25:59] -rw-------. 1 boinc boinc    980125 Jul 26 21:21 agis_schedconf.cvmfs.json
[2025-07-26 21:25:59] -rw-------. 1 boinc boinc   1593052 Jul 26 21:21 agis_ddmendpoints.agis.ALL.json
[2025-07-26 21:25:59] drwx------. 4 boinc boinc      4096 Jul 26 21:21 pilot3
[2025-07-26 21:25:59] -rw-r--r--. 1 boinc boinc       523 Jul 26 21:22 boinc_task_state.xml
[2025-07-26 21:25:59] -rw-------. 1 boinc boinc       965 Jul 26 21:22 memory_monitor_summary.json
[2025-07-26 21:25:59] -rw-------. 1 boinc boinc     21228 Jul 26 21:23 log.45759912._000032.job.log.tgz.1
[2025-07-26 21:25:59] -rw-------. 1 boinc boinc      8385 Jul 26 21:25 heartbeat.json
[2025-07-26 21:25:59] -rw-------. 1 boinc boinc        95 Jul 26 21:25 pilot_heartbeat.json
[2025-07-26 21:25:59] -rw-------. 1 boinc boinc       823 Jul 26 21:25 pilotlog.txt
[2025-07-26 21:25:59] -rw-r--r--. 1 boinc boinc        22 Jul 26 21:25 wrapper_checkpoint.txt
[2025-07-26 21:25:59] -rw-r--r--. 1 boinc boinc      8192 Jul 26 21:25 boinc_mmap_file
[2025-07-26 21:25:59] -rw-------. 1 boinc boinc     80409 Jul 26 21:25 log.45759912._000032.job.log.1
[2025-07-26 21:25:59] -rw-------. 1 boinc boinc       188 Jul 26 21:25 output.list
[2025-07-26 21:25:59] -rw-r--r--. 1 boinc boinc       620 Jul 26 21:25 runtime_log
[2025-07-26 21:25:59] -rw-------. 1 boinc boinc    122880 Jul 26 21:25 result.tar.gz
[2025-07-26 21:25:59] -rw-------. 1 boinc boinc       647 Jul 26 21:25 xIpMDm2d5z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnpTLDmEmh3Jn.diag
[2025-07-26 21:25:59] -rw-r--r--. 1 boinc boinc      8650 Jul 26 21:25 runtime_log.err
[2025-07-26 21:25:59] -rw-r--r--. 1 boinc boinc     21992 Jul 26 21:25 stderr.txt
[2025-07-26 21:25:59] No HITS result produced
[2025-07-26 21:25:59]  *** Contents of shared directory: ***
[2025-07-26 21:25:59] total 229684
[2025-07-26 21:25:59] -rw-r--r--. 2 boinc boinc 234506750 Jul 26 21:20 ATLAS.root_0
[2025-07-26 21:25:59] -rw-r--r--. 2 boinc boinc     15095 Jul 26 21:20 start_atlas.sh
[2025-07-26 21:25:59] -rw-r--r--. 2 boinc boinc    542869 Jul 26 21:20 input.tar.gz
[2025-07-26 21:25:59] -rw-------. 1 boinc boinc    122880 Jul 26 21:25 result.tar.gz
21:26:00 (2000468): run_atlas exited; CPU time 22.490066
21:26:00 (2000468): called boinc_finish(0)

</stderr_txt>
]]>

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