Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:50:40 (5556): wrapper (7.7.26015): starting
16:50:40 (5556): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 16:50:40] Arguments: --nthreads 8
[2025-07-27 16:50:40] Threads: 8
[2025-07-27 16:50:40] Checking for CVMFS
[2025-07-27 16:50:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 16:50:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 16:50:41] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 16:50:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 16:50:41] 2.11.2.0 20081 109685 106512 148815 1 206 18875842 25165825 3536 130560 0 72743980 99.873 47543676 3191 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-27 16:50:41] CVMFS is ok
[2025-07-27 16:50:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 16:50:41] Checking for apptainer binary...
[2025-07-27 16:50:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 16:50:41] Running /usr/bin/apptainer --version
[2025-07-27 16:50:41] apptainer version 1.3.2-1.el7
[2025-07-27 16:50:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 16:50:43] cg-vwn273.simple-grid.lan
[2025-07-27 16:50:43] apptainer works
[2025-07-27 16:50:43] Set ATHENA_PROC_NUMBER=8
[2025-07-27 16:50:43] Set ATHENA_CORE_NUMBER=8
[2025-07-27 16:50:43] Starting ATLAS job with PandaID=6745862429
[2025-07-27 16:50:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 22:45:34]  *** The last 200 lines of the pilot log: ***
[2025-07-27 22:45:34] 2025-07-27 19:42:09,740 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 22:45:34] 2025-07-27 19:42:09,740 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 22:45:34] 2025-07-27 19:42:09,746 | INFO     | fitting pss+swap vs Time
[2025-07-27 22:45:34] 2025-07-27 19:42:09,747 | INFO     | sum of square deviations: 7102775035.0
[2025-07-27 22:45:34] 2025-07-27 19:42:09,750 | INFO     | sum of deviations: 17429942848.000004
[2025-07-27 22:45:34] 2025-07-27 19:42:09,750 | INFO     | mean x: 1753636554.5
[2025-07-27 22:45:34] 2025-07-27 19:42:09,750 | INFO     | mean y: 2494964.915492958
[2025-07-27 22:45:34] 2025-07-27 19:42:09,750 | INFO     | -- intersect: -4300863197.2790165
[2025-07-27 22:45:34] 2025-07-27 19:42:09,750 | INFO     | intersect: -4300863197.2790165
[2025-07-27 22:45:34] 2025-07-27 19:42:09,751 | INFO     | chi2: 2.425420160307084
[2025-07-27 22:45:34] 2025-07-27 19:42:09,751 | INFO     | sum of square deviations: 6734191380.0
[2025-07-27 22:45:34] 2025-07-27 19:42:09,754 | INFO     | sum of deviations: 35906888720.0
[2025-07-27 22:45:34] 2025-07-27 19:42:09,754 | INFO     | mean x: 1753636402.0
[2025-07-27 22:45:34] 2025-07-27 19:42:09,754 | INFO     | mean y: 2502497.6594982077
[2025-07-27 22:45:34] 2025-07-27 19:42:09,754 | INFO     | -- intersect: -9347933744.613615
[2025-07-27 22:45:34] 2025-07-27 19:42:09,754 | INFO     | intersect: -9347933744.613615
[2025-07-27 22:45:34] 2025-07-27 19:42:09,755 | INFO     | chi2: 1.6500033898325293
[2025-07-27 22:45:34] 2025-07-27 19:42:09,755 | INFO     | current chi2=1.6500033898325293 (change=31.970410041300994 %)
[2025-07-27 22:45:34] 2025-07-27 19:42:09,755 | INFO     | sum of square deviations: 6378584712.5
[2025-07-27 22:45:34] 2025-07-27 19:42:09,758 | INFO     | sum of deviations: 35127467807.999985
[2025-07-27 22:45:34] 2025-07-27 19:42:09,758 | INFO     | mean x: 1753636249.5
[2025-07-27 22:45:34] 2025-07-27 19:42:09,758 | INFO     | mean y: 2502163.4817518247
[2025-07-27 22:45:34] 2025-07-27 19:42:09,758 | INFO     | -- intersect: -9654938111.7152
[2025-07-27 22:45:34] 2025-07-27 19:42:09,758 | INFO     | intersect: -9654938111.7152
[2025-07-27 22:45:34] 2025-07-27 19:42:09,759 | INFO     | chi2: 1.6506701782647921
[2025-07-27 22:45:34] 2025-07-27 19:42:09,759 | INFO     | current chi2=1.6506701782647921 (change=-0.040411337114316055 %)
[2025-07-27 22:45:34] 2025-07-27 19:42:09,759 | INFO     | right removable region: 273
[2025-07-27 22:45:34] 2025-07-27 19:42:09,760 | INFO     | sum of square deviations: 6734191380.0
[2025-07-27 22:45:34] 2025-07-27 19:42:09,762 | INFO     | sum of deviations: -29892767448.0
[2025-07-27 22:45:34] 2025-07-27 19:42:09,763 | INFO     | mean x: 1753636707.0
[2025-07-27 22:45:34] 2025-07-27 19:42:09,763 | INFO     | mean y: 2514406.7992831543
[2025-07-27 22:45:34] 2025-07-27 19:42:09,763 | INFO     | -- intersect: 7786827520.666789
[2025-07-27 22:45:34] 2025-07-27 19:42:09,763 | INFO     | intersect: 7786827520.666789
[2025-07-27 22:45:34] 2025-07-27 19:42:09,763 | INFO     | chi2: 0.8977540687147303
[2025-07-27 22:45:34] 2025-07-27 19:42:09,764 | INFO     | current chi2=0.8977540687147303 (change=62.985626844914776 %)
[2025-07-27 22:45:34] 2025-07-27 19:42:09,764 | INFO     | sum of square deviations: 6378584712.5
[2025-07-27 22:45:34] 2025-07-27 19:42:09,767 | INFO     | sum of deviations: -27075441577.999996
[2025-07-27 22:45:34] 2025-07-27 19:42:09,767 | INFO     | mean x: 1753636859.5
[2025-07-27 22:45:34] 2025-07-27 19:42:09,767 | INFO     | mean y: 2513176.00729927
[2025-07-27 22:45:34] 2025-07-27 19:42:09,767 | INFO     | -- intersect: 7446247872.4162
[2025-07-27 22:45:34] 2025-07-27 19:42:09,767 | INFO     | intersect: 7446247872.4162
[2025-07-27 22:45:34] 2025-07-27 19:42:09,768 | INFO     | chi2: 0.882191152415061
[2025-07-27 22:45:34] 2025-07-27 19:42:09,768 | INFO     | current chi2=0.882191152415061 (change=1.7335389325441855 %)
[2025-07-27 22:45:34] 2025-07-27 19:42:09,768 | INFO     | left removable region: 20
[2025-07-27 22:45:34] 2025-07-27 19:42:09,769 | INFO     | sum of square deviations: 5021496942.0
[2025-07-27 22:45:34] 2025-07-27 19:42:09,771 | INFO     | sum of deviations: 8990199275.999998
[2025-07-27 22:45:34] 2025-07-27 19:42:09,771 | INFO     | mean x: 1753636829.0
[2025-07-27 22:45:34] 2025-07-27 19:42:09,771 | INFO     | mean y: 2512727.782608696
[2025-07-27 22:45:34] 2025-07-27 19:42:09,771 | INFO     | -- intersect: -3137097777.3197827
[2025-07-27 22:45:34] 2025-07-27 19:42:09,771 | INFO     | intersect: -3137097777.3197827
[2025-07-27 22:45:34] 2025-07-27 19:42:09,772 | INFO     | chi2: 0.012242872902741087
[2025-07-27 22:45:34] 2025-07-27 19:42:09,772 | INFO     | -- intersect: -3137097777.3197827
[2025-07-27 22:45:34] 2025-07-27 19:42:09,772 | INFO     | current memory leak: 1.79 B/s (using 253 data points, chi2=0.01)
[2025-07-27 22:45:34] 2025-07-27 19:42:09,773 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-27 22:45:34] 2025-07-27 19:42:09,773 | INFO     | ..............................
[2025-07-27 22:45:34] 2025-07-27 19:42:09,773 | INFO     | . Timing measurements:
[2025-07-27 22:45:34] 2025-07-27 19:42:09,773 | INFO     | . get job = 0 s
[2025-07-27 22:45:34] 2025-07-27 19:42:09,773 | INFO     | . initial setup = 1 s
[2025-07-27 22:45:34] 2025-07-27 19:42:09,773 | INFO     | . payload setup = 15 s
[2025-07-27 22:45:34] 2025-07-27 19:42:09,773 | INFO     | . stage-in = 0 s
[2025-07-27 22:45:34] 2025-07-27 19:42:09,773 | INFO     | . payload execution = 17318 s
[2025-07-27 22:45:34] 2025-07-27 19:42:09,773 | INFO     | . stage-out = 4 s
[2025-07-27 22:45:34] 2025-07-27 19:42:09,774 | INFO     | . log creation = 1 s
[2025-07-27 22:45:34] 2025-07-27 19:42:09,774 | INFO     | ..............................
[2025-07-27 22:45:34] 2025-07-27 19:42:09,980 | INFO     | 
[2025-07-27 22:45:34] 2025-07-27 19:42:09,981 | INFO     | job summary report
[2025-07-27 22:45:34] 2025-07-27 19:42:09,981 | INFO     | --------------------------------------------------
[2025-07-27 22:45:34] 2025-07-27 19:42:09,981 | INFO     | PanDA job id: 6745862429
[2025-07-27 22:45:34] 2025-07-27 19:42:09,981 | INFO     | task id: 45758763
[2025-07-27 22:45:34] 2025-07-27 19:42:09,981 | INFO     | errors: (none)
[2025-07-27 22:45:34] 2025-07-27 19:42:09,981 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 22:45:34] 2025-07-27 19:42:09,981 | INFO     | pilot state: finished 
[2025-07-27 22:45:34] 2025-07-27 19:42:09,981 | INFO     | transexitcode: 0
[2025-07-27 22:45:34] 2025-07-27 19:42:09,981 | INFO     | exeerrorcode: 0
[2025-07-27 22:45:34] 2025-07-27 19:42:09,981 | INFO     | exeerrordiag: 
[2025-07-27 22:45:34] 2025-07-27 19:42:09,981 | INFO     | exitcode: 0
[2025-07-27 22:45:34] 2025-07-27 19:42:09,982 | INFO     | exitmsg: OK
[2025-07-27 22:45:34] 2025-07-27 19:42:09,982 | INFO     | cpuconsumptiontime: 66689 s
[2025-07-27 22:45:34] 2025-07-27 19:42:09,982 | INFO     | nevents: 400
[2025-07-27 22:45:34] 2025-07-27 19:42:09,982 | INFO     | neventsw: 0
[2025-07-27 22:45:34] 2025-07-27 19:42:09,982 | INFO     | pid: 15771
[2025-07-27 22:45:34] 2025-07-27 19:42:09,982 | INFO     | pgrp: 15771
[2025-07-27 22:45:34] 2025-07-27 19:42:09,982 | INFO     | corecount: 8
[2025-07-27 22:45:34] 2025-07-27 19:42:09,982 | INFO     | event service: False
[2025-07-27 22:45:34] 2025-07-27 19:42:09,982 | INFO     | sizes: {0: 2397230, 1: 2397485, 11: 2397747, 12: 2397775, 17338: 2429170, 17342: 2438170, 17343: 2438354, 17443: 2438548}
[2025-07-27 22:45:34] 2025-07-27 19:42:09,982 | INFO     | --------------------------------------------------
[2025-07-27 22:45:34] 2025-07-27 19:42:09,982 | INFO     | 
[2025-07-27 22:45:34] 2025-07-27 19:42:09,983 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-07-27 22:45:34] 2025-07-27 19:42:10,546 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 22:45:34] 2025-07-27 19:42:10,547 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 22:45:34] 2025-07-27 19:42:10,547 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 22:45:34] 2025-07-27 19:42:10,547 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 22:45:34] 2025-07-27 19:42:10,547 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 22:45:34] 2025-07-27 19:42:10,547 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 22:45:34] 2025-07-27 19:42:10,547 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 22:45:34] 2025-07-27 19:42:10,547 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 22:45:34] 2025-07-27 19:42:10,547 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 22:45:34] 2025-07-27 19:42:10,548 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 22:45:34] 2025-07-27 19:42:10,548 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 22:45:34] 2025-07-27 19:42:10,548 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 22:45:34] 2025-07-27 19:42:10,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 22:45:34] 2025-07-27 19:42:10,548 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 22:45:34] 2025-07-27 19:42:10,548 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 22:45:34] 2025-07-27 19:42:10,548 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 22:45:34] 2025-07-27 19:42:10,548 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 22:45:34] 2025-07-27 19:42:10,548 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 22:45:34] 2025-07-27 19:42:10,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 22:45:34] 2025-07-27 19:42:10,549 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 22:45:34] 2025-07-27 19:42:10,549 | INFO     | job 6745862429 has completed (purged errors)
[2025-07-27 22:45:34] 2025-07-27 19:42:10,549 | INFO     | overall cleanup function is called
[2025-07-27 22:45:34] 2025-07-27 19:42:11,558 | INFO     | --- collectZombieJob: --- 10, [15771]
[2025-07-27 22:45:34] 2025-07-27 19:42:11,559 | INFO     | zombie collector waiting for pid 15771
[2025-07-27 22:45:34] 2025-07-27 19:42:11,559 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 22:45:34] 2025-07-27 19:42:11,559 | INFO     | collected zombie processes
[2025-07-27 22:45:34] 2025-07-27 19:42:11,559 | INFO     | will attempt to kill all subprocesses of pid=15771
[2025-07-27 22:45:34] 2025-07-27 19:42:11,668 | INFO     | process IDs to be killed: [15771] (in reverse order)
[2025-07-27 22:45:34] 2025-07-27 19:42:12,306 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 22:45:34] 2025-07-27 19:42:12,306 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 22:45:34] 2025-07-27 19:42:12,309 | INFO     | did not find any defunct processes belonging to 15771
[2025-07-27 22:45:34] 2025-07-27 19:42:12,312 | INFO     | did not find any defunct processes belonging to 15771
[2025-07-27 22:45:34] 2025-07-27 19:42:12,313 | INFO     | ready for new job
[2025-07-27 22:45:34] 2025-07-27 19:42:12,313 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 22:45:34] 2025-07-27 19:42:12,315 | INFO     | ***************************************
[2025-07-27 22:45:34] 2025-07-27 19:42:12,315 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 22:45:34] 2025-07-27 19:42:12,315 | INFO     | ***************************************
[2025-07-27 22:45:34] 2025-07-27 19:42:12,315 | INFO     | 
[2025-07-27 22:45:34] 2025-07-27 19:42:12,316 | INFO     | pilot is running in a VM
[2025-07-27 22:45:34] 2025-07-27 19:42:12,316 | INFO     | architecture information:
[2025-07-27 22:45:34] 2025-07-27 19:42:12,322 | INFO     | executing command: cat /etc/os-release
[2025-07-27 22:45:34] 2025-07-27 19:42:12,430 | INFO     | cat /etc/os-release:
[2025-07-27 22:45:34] NAME="CentOS Linux"
[2025-07-27 22:45:34] VERSION="7 (Core)"
[2025-07-27 22:45:34] ID="centos"
[2025-07-27 22:45:34] ID_LIKE="rhel fedora"
[2025-07-27 22:45:34] VERSION_ID="7"
[2025-07-27 22:45:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 22:45:34] ANSI_COLOR="0;31"
[2025-07-27 22:45:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 22:45:34] HOME_URL="https://www.centos.org/"
[2025-07-27 22:45:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 22:45:34] 
[2025-07-27 22:45:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 22:45:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 22:45:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 22:45:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 22:45:34] 
[2025-07-27 22:45:34] 2025-07-27 19:42:12,430 | INFO     | ***************************************
[2025-07-27 22:45:34] 2025-07-27 19:42:12,934 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-07-27 22:45:34] 2025-07-27 19:42:13,069 | INFO     | sufficient remaining disk space (496680042496 B)
[2025-07-27 22:45:34] 2025-07-27 19:42:13,069 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 22:45:34] 2025-07-27 19:42:13,070 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 22:45:34] 2025-07-27 19:42:13,070 | INFO     | update_server=False
[2025-07-27 22:45:34] 2025-07-27 19:42:13,070 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 22:45:34] 2025-07-27 19:42:13,070 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 22:45:34] 2025-07-27 19:42:13,079 | INFO     | all job control threads have been joined
[2025-07-27 22:45:34] 2025-07-27 19:42:13,390 | INFO     | all data control threads have been joined
[2025-07-27 22:45:34] 2025-07-27 19:42:13,411 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:45:34] 2025-07-27 19:42:13,412 | INFO     | aborting loop
[2025-07-27 22:45:34] 2025-07-27 19:42:14,075 | INFO     | [job] retrieve thread has finished
[2025-07-27 22:45:34] 2025-07-27 19:42:14,084 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 22:45:34] 2025-07-27 19:42:14,085 | INFO     | [job] control thread has finished
[2025-07-27 22:45:34] 2025-07-27 19:42:14,147 | INFO     | [payload] failed_post thread has finished
[2025-07-27 22:45:34] 2025-07-27 19:42:14,258 | INFO     | all payload control threads have been joined
[2025-07-27 22:45:34] 2025-07-27 19:42:14,396 | INFO     | [data] control thread has finished
[2025-07-27 22:45:34] 2025-07-27 19:42:14,417 | INFO     | [job] job monitor thread has finished
[2025-07-27 22:45:34] 2025-07-27 19:42:14,874 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 22:45:34] 2025-07-27 19:42:14,995 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:45:34] 2025-07-27 19:42:15,018 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 22:45:34] 2025-07-27 19:42:15,076 | INFO     | [data] copytool_out thread has finished
[2025-07-27 22:45:34] 2025-07-27 19:42:15,125 | INFO     | [payload] validate_post thread has finished
[2025-07-27 22:45:34] 2025-07-27 19:42:15,226 | INFO     | [data] copytool_in thread has finished
[2025-07-27 22:45:34] 2025-07-27 19:42:15,264 | INFO     | [payload] control thread has finished
[2025-07-27 22:45:34] 2025-07-27 19:42:15,306 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 22:45:34] 2025-07-27 19:42:15,457 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 22:45:34] 2025-07-27 19:42:15,537 | INFO     | [job] validate thread has finished
[2025-07-27 22:45:34] 2025-07-27 19:42:16,001 | INFO     | [job] queue monitor thread has finished
[2025-07-27 22:45:34] 2025-07-27 19:42:19,316 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 22:45:34] 2025-07-27 19:42:19,661 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140340741494592)>', '<ExcThread(monitor, started 140339935442688)>']
[2025-07-27 22:45:34] 2025-07-27 19:42:24,687 | INFO     | all workflow threads have been joined
[2025-07-27 22:45:34] 2025-07-27 19:42:24,688 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 22:45:34] 2025-07-27 19:42:24,688 | INFO     | traces error code: 0
[2025-07-27 22:45:34] 2025-07-27 19:42:24,688 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 22:45:34] 2025-07-27 19:42:43,132 | INFO     | PID=9238 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 22:45:34] 2025-07-27 19:42:43,132 | INFO     | .. there are 9 such processes running
[2025-07-27 22:45:34] 2025-07-27 19:42:43,134 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 22:45:34] 2025-07-27 19:42:43,134 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 22:45:34] 2025-07-27 19:42:43,134 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 22:45:34] 2025-07-27 19:42:43,134 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 22:45:34] 2025-07-27 19:42:43,135 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 22:45:34] 2025-07-27 19:42:43,135 | INFO     | [monitor] control thread has ended
[2025-07-27 22:45:34] 2025-07-27 19:42:43,474 [wrapper] ==== pilot stdout END ====
[2025-07-27 22:45:34] 2025-07-27 19:42:43,533 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 22:45:34] 2025-07-27 19:42:43,595 [wrapper] pilotpid: 9238
[2025-07-27 22:45:34] 2025-07-27 19:42:43,652 [wrapper] Pilot exit status: 0
[2025-07-27 22:45:34] 2025-07-27 19:42:44,126 [wrapper] pandaids: 6745862429
[2025-07-27 22:45:34] 2025-07-27 19:42:44,993 [wrapper] cleanup supervisor_pilot 11333 9239
[2025-07-27 22:45:34] 2025-07-27 19:42:45,080 [wrapper] Test setup, not cleaning
[2025-07-27 22:45:34] 2025-07-27 19:42:45,137 [wrapper] apfmon messages muted
[2025-07-27 22:45:34] 2025-07-27 19:42:45,236 [wrapper] ==== wrapper stdout END ====
[2025-07-27 22:45:34] 2025-07-27 19:42:45,327 [wrapper] ==== wrapper stderr END ====
[2025-07-27 22:45:34]  *** Error codes and diagnostics ***
[2025-07-27 22:45:34]     "exeErrorCode": 0,
[2025-07-27 22:45:34]     "exeErrorDiag": "",
[2025-07-27 22:45:34]     "pilotErrorCode": 0,
[2025-07-27 22:45:34]     "pilotErrorDiag": "",
[2025-07-27 22:45:34]  *** Listing of results directory ***
[2025-07-27 22:45:34] total 422124
[2025-07-27 22:45:34] -rw-r--r--. 1 boinc boinc    530466 Jul 27 00:38 pilot3.tar.gz
[2025-07-27 22:45:34] -rwx------. 1 boinc boinc     36292 Jul 27 01:06 runpilot2-wrapper.sh
[2025-07-27 22:45:34] -rw-r--r--. 1 boinc boinc      5112 Jul 27 01:06 queuedata.json
[2025-07-27 22:45:34] -rw-r--r--. 1 boinc boinc       100 Jul 27 16:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 22:45:34] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 16:50 run_atlas
[2025-07-27 22:45:34] -rw-r--r--. 1 boinc boinc       105 Jul 27 16:50 job.xml
[2025-07-27 22:45:34] -rw-r--r--. 1 boinc boinc      6391 Jul 27 16:50 init_data.xml
[2025-07-27 22:45:34] -rw-r--r--. 2 boinc boinc 244298006 Jul 27 16:50 EVNT.45758761._000004.pool.root.1
[2025-07-27 22:45:34] -rw-r--r--. 2 boinc boinc     15095 Jul 27 16:50 start_atlas.sh
[2025-07-27 22:45:34] drwxrwx--x. 2 boinc boinc        68 Jul 27 16:50 shared
[2025-07-27 22:45:34] -rw-r--r--. 2 boinc boinc    542876 Jul 27 16:50 input.tar.gz
[2025-07-27 22:45:34] -rw-r--r--. 1 boinc boinc         0 Jul 27 16:50 boinc_lockfile
[2025-07-27 22:45:34] -rw-r--r--. 1 boinc boinc      2549 Jul 27 16:50 pandaJob.out
[2025-07-27 22:45:34] -rw-------. 1 boinc boinc    980109 Jul 27 16:51 agis_schedconf.cvmfs.json
[2025-07-27 22:45:34] drwx------. 4 boinc boinc      4096 Jul 27 16:51 pilot3
[2025-07-27 22:45:34] -rw-------. 1 boinc boinc 180277987 Jul 27 21:39 HITS.45758763._000084.pool.root.1
[2025-07-27 22:45:34] -rw-r--r--. 1 boinc boinc       531 Jul 27 21:39 boinc_task_state.xml
[2025-07-27 22:45:34] -rw-------. 1 boinc boinc      1018 Jul 27 21:40 memory_monitor_summary.json
[2025-07-27 22:45:34] -rw-------. 1 boinc boinc   1593052 Jul 27 21:40 agis_ddmendpoints.agis.ALL.json
[2025-07-27 22:45:34] -rw-------. 1 boinc boinc    410856 Jul 27 21:40 log.45758763._000084.job.log.tgz.1
[2025-07-27 22:45:34] -rw-------. 1 boinc boinc      7762 Jul 27 21:42 heartbeat.json
[2025-07-27 22:45:34] -rw-------. 1 boinc boinc        95 Jul 27 21:42 pilot_heartbeat.json
[2025-07-27 22:45:34] -rw-------. 1 boinc boinc       889 Jul 27 21:42 pilotlog.txt
[2025-07-27 22:45:34] -rw-------. 1 boinc boinc   1498634 Jul 27 21:42 log.45758763._000084.job.log.1
[2025-07-27 22:45:34] -rw-------. 1 boinc boinc       357 Jul 27 21:42 output.list
[2025-07-27 22:45:34] -rw-r--r--. 1 boinc boinc       620 Jul 27 21:42 runtime_log
[2025-07-27 22:45:34] -rw-------. 1 boinc boinc   1925120 Jul 27 21:42 result.tar.gz
[2025-07-27 22:45:34] -rw-r--r--. 1 boinc boinc      8674 Jul 27 21:42 runtime_log.err
[2025-07-27 22:45:34] -rw-------. 1 boinc boinc       656 Jul 27 21:42 3lJODm582z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmta1KDm8xjgIm.diag
[2025-07-27 22:45:34] -rw-r--r--. 1 boinc boinc      8192 Jul 27 22:45 boinc_mmap_file
[2025-07-27 22:45:34] -rw-r--r--. 1 boinc boinc        28 Jul 27 22:45 wrapper_checkpoint.txt
[2025-07-27 22:45:34] -rw-r--r--. 1 boinc boinc     20566 Jul 27 22:45 stderr.txt
[2025-07-27 22:45:34] HITS file was successfully produced:
[2025-07-27 22:45:34] -rw-------. 1 boinc boinc 180277987 Jul 27 21:39 shared/HITS.pool.root.1
[2025-07-27 22:45:34]  *** Contents of shared directory: ***
[2025-07-27 22:45:34] total 417060
[2025-07-27 22:45:34] -rw-r--r--. 2 boinc boinc 244298006 Jul 27 16:50 ATLAS.root_0
[2025-07-27 22:45:34] -rw-r--r--. 2 boinc boinc     15095 Jul 27 16:50 start_atlas.sh
[2025-07-27 22:45:34] -rw-r--r--. 2 boinc boinc    542876 Jul 27 16:50 input.tar.gz
[2025-07-27 22:45:34] -rw-------. 1 boinc boinc 180277987 Jul 27 21:39 HITS.pool.root.1
[2025-07-27 22:45:34] -rw-------. 1 boinc boinc   1925120 Jul 27 21:42 result.tar.gz
22:45:36 (5556): run_atlas exited; CPU time 66919.558830
22:45:36 (5556): called boinc_finish(0)

</stderr_txt>
]]>

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