Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:13:17 (699): wrapper (7.7.26015): starting
00:13:17 (699): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 00:13:17] Arguments: --nthreads 12
[2025-07-27 00:13:17] Threads: 12
[2025-07-27 00:13:17] Checking for CVMFS
[2025-07-27 00:13:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 00:13:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 00:13:17] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 00:13:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 00:13:17] 2.11.2.0 2979 111507 102324 148799 2 57 15627620 20275201 1 130560 0 37685492 99.971 9499490 10555 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-27 00:13:17] CVMFS is ok
[2025-07-27 00:13:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 00:13:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 00:13:17] Further information can be found at the LHC@home message board.
[2025-07-27 00:13:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 00:13:17] Checking for apptainer binary...
[2025-07-27 00:13:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 00:13:17] Running /usr/bin/apptainer --version
[2025-07-27 00:13:17] apptainer version 1.3.2-1.el7
[2025-07-27 00:13:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 00:13:19] c-205-7.aglt2.org
[2025-07-27 00:13:19] apptainer works
[2025-07-27 00:13:19] Set ATHENA_PROC_NUMBER=12
[2025-07-27 00:13:19] Set ATHENA_CORE_NUMBER=12
[2025-07-27 00:13:19] Starting ATLAS job with PandaID=6745851311
[2025-07-27 00:13:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 01:42:31]  *** The last 200 lines of the pilot log: ***
[2025-07-27 01:42:31]  lfn=log.45759596._000104.job.log.tgz.1
[2025-07-27 01:42:31]  mtime=0
[2025-07-27 01:42:31]  protocol_id=None
[2025-07-27 01:42:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 01:42:31]  replicas=None
[2025-07-27 01:42:31]  scope=mc23_13p6TeV
[2025-07-27 01:42:31]  status=None
[2025-07-27 01:42:31]  status_code=0
[2025-07-27 01:42:31]  storage_token=
[2025-07-27 01:42:31]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745851311/log.45759596._000104.job.log.tgz.1
[2025-07-27 01:42:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/1b/log.45759596._000104.job.log.tgz.1
[2025-07-27 01:42:31]  workdir=None
[2025-07-27 01:42:31] ]
[2025-07-27 01:42:31] 2025-07-27 05:41:53,784 | INFO     | transferring file log.45759596._000104.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745851311/log.45759596._000104.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 01:42:31] 2025-07-27 05:41:53,784 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745851311/log.45759596._000104.job.log.tgz.1 /tmp/boinchome/slots/0/log.45759596._000104.job
[2025-07-27 01:42:31] 2025-07-27 05:41:53,806 | INFO     | adding to output.list: log.45759596._000104.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/1b/log.45759596._000104.job.log.tg
[2025-07-27 01:42:31] 2025-07-27 05:41:53,807 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 01:42:31] 2025-07-27 05:41:53,807 | INFO     | summary of transferred files:
[2025-07-27 01:42:31] 2025-07-27 05:41:53,807 | INFO     |  -- lfn=log.45759596._000104.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 01:42:31] 2025-07-27 05:41:53,807 | INFO     | stage-out finished correctly
[2025-07-27 01:42:31] 2025-07-27 05:41:54,133 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 01:42:31] 2025-07-27 05:41:54,215 | INFO     | job 6745851311 has state=finished
[2025-07-27 01:42:31] 2025-07-27 05:41:54,215 | INFO     | preparing for final server update for job 6745851311 in state='finished'
[2025-07-27 01:42:31] 2025-07-27 05:41:54,216 | INFO     | this job has now completed (state=finished)
[2025-07-27 01:42:31] 2025-07-27 05:41:54,216 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 01:42:31] 2025-07-27 05:41:54,216 | INFO     | log transfer has been attempted: DONE
[2025-07-27 01:42:31] 2025-07-27 05:41:54,216 | INFO     | job 6745851311 has finished - writing final server update
[2025-07-27 01:42:31] 2025-07-27 05:41:54,217 | INFO     | total number of processed events: 400 (read)
[2025-07-27 01:42:31] 2025-07-27 05:41:54,217 | INFO     | executing command: lscpu
[2025-07-27 01:42:31] 2025-07-27 05:41:54,244 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 01:42:31] 2025-07-27 05:41:55,613 | WARNING  | process 11622 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 01:42:31] 2025-07-27 05:41:55,613 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745851311/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 01:42:31] 2025-07-27 05:41:55,701 | INFO     | number of running child processes to parent process 11622: 1
[2025-07-27 01:42:31] 2025-07-27 05:41:55,702 | INFO     | maximum number of monitored processes: 6
[2025-07-27 01:42:31] 2025-07-27 05:41:58,205 | INFO     | monitor loop #395: job 0:6745851311 is in state 'finished'
[2025-07-27 01:42:31] 2025-07-27 05:41:58,205 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 01:42:31] 2025-07-27 05:41:59,213 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 01:42:31] 2025-07-27 05:41:59,219 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1751.25
[2025-07-27 01:42:31] 2025-07-27 05:41:59,221 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745851311/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 01:42:31] 2025-07-27 05:41:59,222 | INFO     | extracted standard info from prmon json
[2025-07-27 01:42:31] 2025-07-27 05:41:59,222 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 01:42:31] 2025-07-27 05:41:59,222 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 01:42:31] 2025-07-27 05:41:59,223 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 01:42:31] 2025-07-27 05:41:59,223 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 01:42:31] 2025-07-27 05:41:59,225 | INFO     | fitting pss+swap vs Time
[2025-07-27 01:42:31] 2025-07-27 05:41:59,225 | INFO     | sum of square deviations: 158737860.0
[2025-07-27 01:42:31] 2025-07-27 05:41:59,225 | INFO     | sum of deviations: -5152974.999999866
[2025-07-27 01:42:31] 2025-07-27 05:41:59,226 | INFO     | mean x: 1753592357.5
[2025-07-27 01:42:31] 2025-07-27 05:41:59,226 | INFO     | mean y: 2730125.475
[2025-07-27 01:42:31] 2025-07-27 05:41:59,226 | INFO     | -- intersect: 59655534.31186051
[2025-07-27 01:42:31] 2025-07-27 05:41:59,226 | INFO     | intersect: 59655534.31186051
[2025-07-27 01:42:31] 2025-07-27 05:41:59,226 | INFO     | chi2: 0.05122489659361336
[2025-07-27 01:42:31] 2025-07-27 05:41:59,226 | INFO     | -- intersect: 59655534.31186051
[2025-07-27 01:42:31] 2025-07-27 05:41:59,227 | INFO     | current memory leak: -0.03 B/s (using 80 data points, chi2=0.05)
[2025-07-27 01:42:31] 2025-07-27 05:41:59,227 | INFO     | could have reported an average CPU frequency of 2048 MHz (6 samples)
[2025-07-27 01:42:31] 2025-07-27 05:41:59,227 | INFO     | ..............................
[2025-07-27 01:42:31] 2025-07-27 05:41:59,227 | INFO     | . Timing measurements:
[2025-07-27 01:42:31] 2025-07-27 05:41:59,227 | INFO     | . get job = 0 s
[2025-07-27 01:42:31] 2025-07-27 05:41:59,228 | INFO     | . initial setup = 2 s
[2025-07-27 01:42:31] 2025-07-27 05:41:59,228 | INFO     | . payload setup = 9 s
[2025-07-27 01:42:31] 2025-07-27 05:41:59,228 | INFO     | . stage-in = 0 s
[2025-07-27 01:42:31] 2025-07-27 05:41:59,228 | INFO     | . payload execution = 5270 s
[2025-07-27 01:42:31] 2025-07-27 05:41:59,228 | INFO     | . stage-out = 0 s
[2025-07-27 01:42:31] 2025-07-27 05:41:59,228 | INFO     | . log creation = 0 s
[2025-07-27 01:42:31] 2025-07-27 05:41:59,229 | INFO     | ..............................
[2025-07-27 01:42:31] 2025-07-27 05:41:59,313 | INFO     | 
[2025-07-27 01:42:31] 2025-07-27 05:41:59,313 | INFO     | job summary report
[2025-07-27 01:42:31] 2025-07-27 05:41:59,313 | INFO     | --------------------------------------------------
[2025-07-27 01:42:31] 2025-07-27 05:41:59,313 | INFO     | PanDA job id: 6745851311
[2025-07-27 01:42:31] 2025-07-27 05:41:59,313 | INFO     | task id: 45759596
[2025-07-27 01:42:31] 2025-07-27 05:41:59,314 | INFO     | errors: (none)
[2025-07-27 01:42:31] 2025-07-27 05:41:59,314 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 01:42:31] 2025-07-27 05:41:59,314 | INFO     | pilot state: finished 
[2025-07-27 01:42:31] 2025-07-27 05:41:59,315 | INFO     | transexitcode: 0
[2025-07-27 01:42:31] 2025-07-27 05:41:59,315 | INFO     | exeerrorcode: 0
[2025-07-27 01:42:31] 2025-07-27 05:41:59,315 | INFO     | exeerrordiag: 
[2025-07-27 01:42:31] 2025-07-27 05:41:59,315 | INFO     | exitcode: 0
[2025-07-27 01:42:31] 2025-07-27 05:41:59,315 | INFO     | exitmsg: OK
[2025-07-27 01:42:31] 2025-07-27 05:41:59,316 | INFO     | cpuconsumptiontime: 57985 s
[2025-07-27 01:42:31] 2025-07-27 05:41:59,316 | INFO     | nevents: 400
[2025-07-27 01:42:31] 2025-07-27 05:41:59,317 | INFO     | neventsw: 0
[2025-07-27 01:42:31] 2025-07-27 05:41:59,317 | INFO     | pid: 11622
[2025-07-27 01:42:31] 2025-07-27 05:41:59,317 | INFO     | pgrp: 11622
[2025-07-27 01:42:31] 2025-07-27 05:41:59,318 | INFO     | corecount: 12
[2025-07-27 01:42:31] 2025-07-27 05:41:59,318 | INFO     | event service: False
[2025-07-27 01:42:31] 2025-07-27 05:41:59,318 | INFO     | sizes: {0: 2397422, 1: 2397422, 5: 2397712, 11: 2397768, 5283: 2424217, 5284: 2424216, 5285: 2433454, 5290: 2433592}
[2025-07-27 01:42:31] 2025-07-27 05:41:59,318 | INFO     | --------------------------------------------------
[2025-07-27 01:42:31] 2025-07-27 05:41:59,319 | INFO     | 
[2025-07-27 01:42:31] 2025-07-27 05:41:59,319 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 01:42:31] 2025-07-27 05:41:59,340 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 01:42:31] 2025-07-27 05:41:59,340 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 01:42:31] 2025-07-27 05:41:59,340 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 01:42:31] 2025-07-27 05:41:59,341 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 01:42:31] 2025-07-27 05:41:59,341 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 01:42:31] 2025-07-27 05:41:59,341 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 01:42:31] 2025-07-27 05:41:59,342 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 01:42:31] 2025-07-27 05:41:59,342 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 01:42:31] 2025-07-27 05:41:59,342 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 01:42:31] 2025-07-27 05:41:59,342 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 01:42:31] 2025-07-27 05:41:59,343 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 01:42:31] 2025-07-27 05:41:59,343 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 01:42:31] 2025-07-27 05:41:59,343 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 01:42:31] 2025-07-27 05:41:59,343 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 01:42:31] 2025-07-27 05:41:59,343 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 01:42:31] 2025-07-27 05:41:59,344 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 01:42:31] 2025-07-27 05:41:59,344 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 01:42:31] 2025-07-27 05:41:59,344 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 01:42:31] 2025-07-27 05:41:59,344 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 01:42:31] 2025-07-27 05:41:59,345 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 01:42:31] 2025-07-27 05:41:59,345 | INFO     | job 6745851311 has completed (purged errors)
[2025-07-27 01:42:31] 2025-07-27 05:41:59,345 | INFO     | overall cleanup function is called
[2025-07-27 01:42:31] 2025-07-27 05:41:59,427 | INFO     | PID=4480 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 01:42:31] 2025-07-27 05:42:00,354 | INFO     | --- collectZombieJob: --- 10, [11622]
[2025-07-27 01:42:31] 2025-07-27 05:42:00,354 | INFO     | zombie collector waiting for pid 11622
[2025-07-27 01:42:31] 2025-07-27 05:42:00,354 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 01:42:31] 2025-07-27 05:42:00,354 | INFO     | collected zombie processes
[2025-07-27 01:42:31] 2025-07-27 05:42:00,355 | INFO     | will attempt to kill all subprocesses of pid=11622
[2025-07-27 01:42:31] 2025-07-27 05:42:00,444 | INFO     | process IDs to be killed: [11622] (in reverse order)
[2025-07-27 01:42:31] 2025-07-27 05:42:00,497 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 01:42:31] 2025-07-27 05:42:00,497 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 01:42:31] 2025-07-27 05:42:00,501 | INFO     | did not find any defunct processes belonging to 11622
[2025-07-27 01:42:31] 2025-07-27 05:42:00,505 | INFO     | did not find any defunct processes belonging to 11622
[2025-07-27 01:42:31] 2025-07-27 05:42:00,505 | INFO     | ready for new job
[2025-07-27 01:42:31] 2025-07-27 05:42:00,505 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 01:42:31] 2025-07-27 05:42:00,507 | INFO     | ***************************************
[2025-07-27 01:42:31] 2025-07-27 05:42:00,507 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 01:42:31] 2025-07-27 05:42:00,507 | INFO     | ***************************************
[2025-07-27 01:42:31] 2025-07-27 05:42:00,507 | INFO     | 
[2025-07-27 01:42:31] 2025-07-27 05:42:00,508 | INFO     | architecture information:
[2025-07-27 01:42:31] 2025-07-27 05:42:00,508 | INFO     | executing command: cat /etc/os-release
[2025-07-27 01:42:31] 2025-07-27 05:42:00,524 | INFO     | cat /etc/os-release:
[2025-07-27 01:42:31] NAME="CentOS Linux"
[2025-07-27 01:42:31] VERSION="7 (Core)"
[2025-07-27 01:42:31] ID="centos"
[2025-07-27 01:42:31] ID_LIKE="rhel fedora"
[2025-07-27 01:42:31] VERSION_ID="7"
[2025-07-27 01:42:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 01:42:31] ANSI_COLOR="0;31"
[2025-07-27 01:42:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 01:42:31] HOME_URL="https://www.centos.org/"
[2025-07-27 01:42:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 01:42:31] 
[2025-07-27 01:42:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 01:42:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 01:42:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 01:42:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 01:42:31] 
[2025-07-27 01:42:31] 2025-07-27 05:42:00,524 | INFO     | ***************************************
[2025-07-27 01:42:31] 2025-07-27 05:42:01,027 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 01:42:31] 2025-07-27 05:42:01,044 | INFO     | sufficient remaining disk space (29358030848 B)
[2025-07-27 01:42:31] 2025-07-27 05:42:01,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 01:42:31] 2025-07-27 05:42:01,045 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 01:42:31] 2025-07-27 05:42:01,045 | INFO     | update_server=False
[2025-07-27 01:42:31] 2025-07-27 05:42:01,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 01:42:31] 2025-07-27 05:42:01,046 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 01:42:31] 2025-07-27 05:42:01,046 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 01:42:31] 2025-07-27 05:42:01,211 | INFO     | all job control threads have been joined
[2025-07-27 01:42:31] 2025-07-27 05:42:01,284 | INFO     | all payload control threads have been joined
[2025-07-27 01:42:31] 2025-07-27 05:42:01,650 | INFO     | all data control threads have been joined
[2025-07-27 01:42:31] 2025-07-27 05:42:01,713 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 01:42:31] 2025-07-27 05:42:01,713 | INFO     | aborting loop
[2025-07-27 01:42:31] 2025-07-27 05:42:01,904 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 01:42:31] 2025-07-27 05:42:02,051 | INFO     | [job] queue monitor thread has finished
[2025-07-27 01:42:31] 2025-07-27 05:42:02,051 | INFO     | [job] retrieve thread has finished
[2025-07-27 01:42:31] 2025-07-27 05:42:02,129 | INFO     | [data] copytool_in thread has finished
[2025-07-27 01:42:31] 2025-07-27 05:42:02,216 | INFO     | [job] control thread has finished
[2025-07-27 01:42:31] 2025-07-27 05:42:02,290 | INFO     | [payload] control thread has finished
[2025-07-27 01:42:31] 2025-07-27 05:42:02,339 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 01:42:31] 2025-07-27 05:42:02,481 | INFO     | [payload] failed_post thread has finished
[2025-07-27 01:42:31] 2025-07-27 05:42:02,655 | INFO     | [data] control thread has finished
[2025-07-27 01:42:31] 2025-07-27 05:42:02,719 | INFO     | [job] job monitor thread has finished
[2025-07-27 01:42:31] 2025-07-27 05:42:02,726 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 01:42:31] 2025-07-27 05:42:02,735 | INFO     | [job] validate thread has finished
[2025-07-27 01:42:31] 2025-07-27 05:42:03,073 | INFO     | [payload] validate_post thread has finished
[2025-07-27 01:42:31] 2025-07-27 05:42:03,212 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 01:42:31] 2025-07-27 05:42:03,909 | INFO     | [data] copytool_out thread has finished
[2025-07-27 01:42:31] 2025-07-27 05:42:05,050 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 01:42:31] 2025-07-27 05:42:11,952 | INFO     | job.realtimelogging is not enabled
[2025-07-27 01:42:31] 2025-07-27 05:42:12,957 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 01:42:31] 2025-07-27 05:42:14,212 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139961805522752)>', '<ExcThread(monitor, started 139961097512704)>']
[2025-07-27 01:42:31] 2025-07-27 05:42:19,235 | INFO     | all workflow threads have been joined
[2025-07-27 01:42:31] 2025-07-27 05:42:19,235 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 01:42:31] 2025-07-27 05:42:19,235 | INFO     | traces error code: 0
[2025-07-27 01:42:31] 2025-07-27 05:42:19,236 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 01:42:31] 2025-07-27 05:42:31,622 | INFO     | PID=4480 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 01:42:31] 2025-07-27 05:42:31,623 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 01:42:31] 2025-07-27 05:42:31,623 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 01:42:31] 2025-07-27 05:42:31,623 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 01:42:31] 2025-07-27 05:42:31,623 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 01:42:31] 2025-07-27 05:42:31,623 | INFO     | [monitor] control thread has ended
[2025-07-27 01:42:31] 2025-07-27 05:42:31,708 [wrapper] ==== pilot stdout END ====
[2025-07-27 01:42:31] 2025-07-27 05:42:31,711 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 01:42:31] 2025-07-27 05:42:31,715 [wrapper] pilotpid: 4480
[2025-07-27 01:42:31] 2025-07-27 05:42:31,719 [wrapper] Pilot exit status: 0
[2025-07-27 01:42:31] 2025-07-27 05:42:31,734 [wrapper] pandaids: 6745851311
[2025-07-27 01:42:31] 2025-07-27 05:42:31,775 [wrapper] cleanup supervisor_pilot 28322 4481
[2025-07-27 01:42:31] 2025-07-27 05:42:31,780 [wrapper] Test setup, not cleaning
[2025-07-27 01:42:31] 2025-07-27 05:42:31,783 [wrapper] apfmon messages muted
[2025-07-27 01:42:31] 2025-07-27 05:42:31,787 [wrapper] ==== wrapper stdout END ====
[2025-07-27 01:42:31] 2025-07-27 05:42:31,791 [wrapper] ==== wrapper stderr END ====
[2025-07-27 01:42:31]  *** Error codes and diagnostics ***
[2025-07-27 01:42:31]     "exeErrorCode": 0,
[2025-07-27 01:42:31]     "exeErrorDiag": "",
[2025-07-27 01:42:31]     "pilotErrorCode": 0,
[2025-07-27 01:42:31]     "pilotErrorDiag": "",
[2025-07-27 01:42:31]  *** Listing of results directory ***
[2025-07-27 01:42:31] total 411784
[2025-07-27 01:42:31] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 18:38 pilot3.tar.gz
[2025-07-27 01:42:31] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 18:53 queuedata.json
[2025-07-27 01:42:31] -rwx------ 1 boincer umatlas     36292 Jul 26 18:55 runpilot2-wrapper.sh
[2025-07-27 01:42:31] -rw-r--r-- 1 boincer umatlas       100 Jul 27 00:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 01:42:31] -rwxr-xr-x 1 boincer umatlas      7986 Jul 27 00:13 run_atlas
[2025-07-27 01:42:31] -rw-r--r-- 1 boincer umatlas       105 Jul 27 00:13 job.xml
[2025-07-27 01:42:31] -rw-r--r-- 2 boincer umatlas 243534319 Jul 27 00:13 EVNT.45759593._000005.pool.root.1
[2025-07-27 01:42:31] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 00:13 start_atlas.sh
[2025-07-27 01:42:31] drwxrwx--x 2 boincer umatlas      4096 Jul 27 00:13 shared
[2025-07-27 01:42:31] -rw-r--r-- 2 boincer umatlas    542880 Jul 27 00:13 input.tar.gz
[2025-07-27 01:42:31] -rw-r--r-- 1 boincer umatlas         0 Jul 27 00:13 boinc_lockfile
[2025-07-27 01:42:31] -rw-r--r-- 1 boincer umatlas      2563 Jul 27 00:13 pandaJob.out
[2025-07-27 01:42:31] -rw------- 1 boincer umatlas    980125 Jul 27 00:13 agis_schedconf.cvmfs.json
[2025-07-27 01:42:31] -rw------- 1 boincer umatlas   1593052 Jul 27 00:13 agis_ddmendpoints.agis.ALL.json
[2025-07-27 01:42:31] drwx------ 4 boincer umatlas      4096 Jul 27 00:13 pilot3
[2025-07-27 01:42:31] -rw-r--r-- 1 boincer umatlas      5867 Jul 27 01:40 init_data.xml
[2025-07-27 01:42:31] -rw------- 1 boincer umatlas 172536862 Jul 27 01:41 HITS.45759596._000104.pool.root.1
[2025-07-27 01:42:31] -rw------- 1 boincer umatlas        95 Jul 27 01:41 pilot_heartbeat.json
[2025-07-27 01:42:31] -rw------- 1 boincer umatlas      1049 Jul 27 01:41 memory_monitor_summary.json
[2025-07-27 01:42:31] -rw------- 1 boincer umatlas    360031 Jul 27 01:41 log.45759596._000104.job.log.tgz.1
[2025-07-27 01:42:31] -rw-r--r-- 1 boincer umatlas       529 Jul 27 01:41 boinc_task_state.xml
[2025-07-27 01:42:31] -rw------- 1 boincer umatlas      7843 Jul 27 01:41 heartbeat.json
[2025-07-27 01:42:31] -rw-r--r-- 1 boincer umatlas        27 Jul 27 01:42 wrapper_checkpoint.txt
[2025-07-27 01:42:31] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 01:42 boinc_mmap_file
[2025-07-27 01:42:31] -rw------- 1 boincer umatlas       744 Jul 27 01:42 pilotlog.txt
[2025-07-27 01:42:31] -rw------- 1 boincer umatlas    499436 Jul 27 01:42 log.45759596._000104.job.log.1
[2025-07-27 01:42:31] -rw------- 1 boincer umatlas       357 Jul 27 01:42 output.list
[2025-07-27 01:42:31] -rw-r--r-- 1 boincer umatlas       620 Jul 27 01:42 runtime_log
[2025-07-27 01:42:31] -rw------- 1 boincer umatlas    880640 Jul 27 01:42 result.tar.gz
[2025-07-27 01:42:31] -rw------- 1 boincer umatlas       658 Jul 27 01:42 swlLDmuy2z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0PTLDmKMQgdm.diag
[2025-07-27 01:42:31] -rw-r--r-- 1 boincer umatlas      8657 Jul 27 01:42 runtime_log.err
[2025-07-27 01:42:31] -rw-r--r-- 1 boincer umatlas     21740 Jul 27 01:42 stderr.txt
[2025-07-27 01:42:31] HITS file was successfully produced:
[2025-07-27 01:42:31] -rw------- 1 boincer umatlas 172536862 Jul 27 01:41 shared/HITS.pool.root.1
[2025-07-27 01:42:31]  *** Contents of shared directory: ***
[2025-07-27 01:42:31] total 407740
[2025-07-27 01:42:31] -rw-r--r-- 2 boincer umatlas 243534319 Jul 27 00:13 ATLAS.root_0
[2025-07-27 01:42:31] -rw-r--r-- 2 boincer umatlas     15095 Jul 27 00:13 start_atlas.sh
[2025-07-27 01:42:31] -rw-r--r-- 2 boincer umatlas    542880 Jul 27 00:13 input.tar.gz
[2025-07-27 01:42:31] -rw------- 1 boincer umatlas 172536862 Jul 27 01:41 HITS.pool.root.1
[2025-07-27 01:42:31] -rw------- 1 boincer umatlas    880640 Jul 27 01:42 result.tar.gz
01:42:33 (699): run_atlas exited; CPU time 57963.902927
01:42:33 (699): called boinc_finish(0)

</stderr_txt>
]]>

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