Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:49 (1289968): wrapper (7.7.26015): starting
00:00:49 (1289968): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 00:00:49] Arguments: --nthreads 8
[2025-07-27 00:00:49] Threads: 8
[2025-07-27 00:00:49] Checking for CVMFS
[2025-07-27 00:00:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 00:00:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 00:00:50] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 00:00:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 00:00:50] 2.12.6.0 557484 17873 264684 148799 0 512 19049873 32935937 11495 16776704 1 82588648 99.590 125757269 19076 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 00:00:50] CVMFS is ok
[2025-07-27 00:00:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 00:00:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 00:00:50] Further information can be found at the LHC@home message board.
[2025-07-27 00:00:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 00:00:50] Checking for apptainer binary...
[2025-07-27 00:00:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 00:00:50] Running /usr/bin/apptainer --version
[2025-07-27 00:00:50] apptainer version 1.4.1-1.el9
[2025-07-27 00:00:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 00:00:50] c7-3-34.aglt2.org
[2025-07-27 00:00:50] apptainer works
[2025-07-27 00:00:50] Set ATHENA_PROC_NUMBER=8
[2025-07-27 00:00:50] Set ATHENA_CORE_NUMBER=8
[2025-07-27 00:00:50] Starting ATLAS job with PandaID=6745851263
[2025-07-27 00:00:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 01:25:36]  *** The last 200 lines of the pilot log: ***
[2025-07-27 01:25:36]  protocol_id=None
[2025-07-27 01:25:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 01:25:36]  replicas=None
[2025-07-27 01:25:36]  scope=mc23_13p6TeV
[2025-07-27 01:25:36]  status=None
[2025-07-27 01:25:36]  status_code=0
[2025-07-27 01:25:36]  storage_token=
[2025-07-27 01:25:36]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745851263/log.45759596._000056.job.log.tgz.1
[2025-07-27 01:25:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/7a/log.45759596._000056.job.log.tgz.1
[2025-07-27 01:25:36]  workdir=None
[2025-07-27 01:25:36] ]
[2025-07-27 01:25:36] 2025-07-27 05:24:58,503 | INFO     | transferring file log.45759596._000056.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745851263/log.45759596._000056.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 01:25:36] 2025-07-27 05:24:58,503 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745851263/log.45759596._000056.job.log.tgz.1 /tmp/boinchome/slots/0/log.45759596._000056.job
[2025-07-27 01:25:36] 2025-07-27 05:24:58,524 | INFO     | adding to output.list: log.45759596._000056.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/7a/log.45759596._000056.job.log.tg
[2025-07-27 01:25:36] 2025-07-27 05:24:58,525 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 01:25:36] 2025-07-27 05:24:58,525 | INFO     | summary of transferred files:
[2025-07-27 01:25:36] 2025-07-27 05:24:58,525 | INFO     |  -- lfn=log.45759596._000056.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 01:25:36] 2025-07-27 05:24:58,525 | INFO     | stage-out finished correctly
[2025-07-27 01:25:36] 2025-07-27 05:24:58,585 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 01:25:36] 2025-07-27 05:24:58,622 | INFO     | monitor loop #366: job 0:6745851263 is in state 'finished'
[2025-07-27 01:25:36] 2025-07-27 05:24:58,628 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 01:25:36] 2025-07-27 05:24:58,854 | INFO     | job 6745851263 has state=finished
[2025-07-27 01:25:36] 2025-07-27 05:24:58,854 | INFO     | preparing for final server update for job 6745851263 in state='finished'
[2025-07-27 01:25:36] 2025-07-27 05:24:58,855 | INFO     | this job has now completed (state=finished)
[2025-07-27 01:25:36] 2025-07-27 05:24:58,855 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 01:25:36] 2025-07-27 05:24:58,855 | INFO     | log transfer has been attempted: DONE
[2025-07-27 01:25:36] 2025-07-27 05:24:58,855 | INFO     | job 6745851263 has finished - writing final server update
[2025-07-27 01:25:36] 2025-07-27 05:24:58,855 | INFO     | total number of processed events: 400 (read)
[2025-07-27 01:25:36] 2025-07-27 05:24:58,856 | INFO     | executing command: lscpu
[2025-07-27 01:25:36] 2025-07-27 05:24:58,935 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 01:25:36] 2025-07-27 05:25:01,140 | INFO     | monitor loop #367: job 0:6745851263 is in state 'finished'
[2025-07-27 01:25:36] 2025-07-27 05:25:01,141 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 01:25:36] 2025-07-27 05:25:03,644 | INFO     | monitor loop #368: job 0:6745851263 is in state 'finished'
[2025-07-27 01:25:36] 2025-07-27 05:25:03,644 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 01:25:36] 2025-07-27 05:25:03,715 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 01:25:36] 2025-07-27 05:25:03,720 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3001.575708333334
[2025-07-27 01:25:36] 2025-07-27 05:25:03,731 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745851263/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 01:25:36] 2025-07-27 05:25:03,732 | INFO     | extracted standard info from prmon json
[2025-07-27 01:25:36] 2025-07-27 05:25:03,732 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 01:25:36] 2025-07-27 05:25:03,732 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 01:25:36] 2025-07-27 05:25:03,732 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 01:25:36] 2025-07-27 05:25:03,732 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 01:25:36] 2025-07-27 05:25:03,734 | INFO     | fitting pss+swap vs Time
[2025-07-27 01:25:36] 2025-07-27 05:25:03,734 | INFO     | sum of square deviations: 130793150.0
[2025-07-27 01:25:36] 2025-07-27 05:25:03,734 | INFO     | sum of deviations: 102761271.00000001
[2025-07-27 01:25:36] 2025-07-27 05:25:03,734 | INFO     | mean x: 1753591458.0
[2025-07-27 01:25:36] 2025-07-27 05:25:03,734 | INFO     | mean y: 2201151.7333333334
[2025-07-27 01:25:36] 2025-07-27 05:25:03,734 | INFO     | -- intersect: -1375556682.2115111
[2025-07-27 01:25:36] 2025-07-27 05:25:03,734 | INFO     | intersect: -1375556682.2115111
[2025-07-27 01:25:36] 2025-07-27 05:25:03,734 | INFO     | chi2: 0.021556472644974886
[2025-07-27 01:25:36] 2025-07-27 05:25:03,734 | INFO     | -- intersect: -1375556682.2115111
[2025-07-27 01:25:36] 2025-07-27 05:25:03,734 | INFO     | current memory leak: 0.79 B/s (using 75 data points, chi2=0.02)
[2025-07-27 01:25:36] 2025-07-27 05:25:03,735 | INFO     | could have reported an average CPU frequency of 3056 MHz (6 samples)
[2025-07-27 01:25:36] 2025-07-27 05:25:03,735 | INFO     | ..............................
[2025-07-27 01:25:36] 2025-07-27 05:25:03,735 | INFO     | . Timing measurements:
[2025-07-27 01:25:36] 2025-07-27 05:25:03,735 | INFO     | . get job = 0 s
[2025-07-27 01:25:36] 2025-07-27 05:25:03,735 | INFO     | . initial setup = 2 s
[2025-07-27 01:25:36] 2025-07-27 05:25:03,735 | INFO     | . payload setup = 8 s
[2025-07-27 01:25:36] 2025-07-27 05:25:03,735 | INFO     | . stage-in = 0 s
[2025-07-27 01:25:36] 2025-07-27 05:25:03,735 | INFO     | . payload execution = 5004 s
[2025-07-27 01:25:36] 2025-07-27 05:25:03,735 | INFO     | . stage-out = 0 s
[2025-07-27 01:25:36] 2025-07-27 05:25:03,735 | INFO     | . log creation = 0 s
[2025-07-27 01:25:36] 2025-07-27 05:25:03,735 | INFO     | ..............................
[2025-07-27 01:25:36] 2025-07-27 05:25:03,799 | INFO     | 
[2025-07-27 01:25:36] 2025-07-27 05:25:03,799 | INFO     | job summary report
[2025-07-27 01:25:36] 2025-07-27 05:25:03,799 | INFO     | --------------------------------------------------
[2025-07-27 01:25:36] 2025-07-27 05:25:03,799 | INFO     | PanDA job id: 6745851263
[2025-07-27 01:25:36] 2025-07-27 05:25:03,799 | INFO     | task id: 45759596
[2025-07-27 01:25:36] 2025-07-27 05:25:03,800 | INFO     | errors: (none)
[2025-07-27 01:25:36] 2025-07-27 05:25:03,800 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 01:25:36] 2025-07-27 05:25:03,800 | INFO     | pilot state: finished 
[2025-07-27 01:25:36] 2025-07-27 05:25:03,800 | INFO     | transexitcode: 0
[2025-07-27 01:25:36] 2025-07-27 05:25:03,800 | INFO     | exeerrorcode: 0
[2025-07-27 01:25:36] 2025-07-27 05:25:03,800 | INFO     | exeerrordiag: 
[2025-07-27 01:25:36] 2025-07-27 05:25:03,800 | INFO     | exitcode: 0
[2025-07-27 01:25:36] 2025-07-27 05:25:03,800 | INFO     | exitmsg: OK
[2025-07-27 01:25:36] 2025-07-27 05:25:03,800 | INFO     | cpuconsumptiontime: 37456 s
[2025-07-27 01:25:36] 2025-07-27 05:25:03,800 | INFO     | nevents: 400
[2025-07-27 01:25:36] 2025-07-27 05:25:03,800 | INFO     | neventsw: 0
[2025-07-27 01:25:36] 2025-07-27 05:25:03,800 | INFO     | pid: 1304605
[2025-07-27 01:25:36] 2025-07-27 05:25:03,800 | INFO     | pgrp: 1304605
[2025-07-27 01:25:36] 2025-07-27 05:25:03,800 | INFO     | corecount: 8
[2025-07-27 01:25:36] 2025-07-27 05:25:03,800 | INFO     | event service: False
[2025-07-27 01:25:36] 2025-07-27 05:25:03,800 | INFO     | sizes: {0: 2397298, 1: 2397497, 7: 2397759, 11: 2397787, 5017: 2423948, 5018: 2433130, 5023: 2433268}
[2025-07-27 01:25:36] 2025-07-27 05:25:03,800 | INFO     | --------------------------------------------------
[2025-07-27 01:25:36] 2025-07-27 05:25:03,800 | INFO     | 
[2025-07-27 01:25:36] 2025-07-27 05:25:03,800 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 01:25:36] 2025-07-27 05:25:03,819 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 01:25:36] 2025-07-27 05:25:03,819 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 01:25:36] 2025-07-27 05:25:03,819 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 01:25:36] 2025-07-27 05:25:03,819 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 01:25:36] 2025-07-27 05:25:03,819 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 01:25:36] 2025-07-27 05:25:03,819 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 01:25:36] 2025-07-27 05:25:03,819 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 01:25:36] 2025-07-27 05:25:03,820 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 01:25:36] 2025-07-27 05:25:03,820 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 01:25:36] 2025-07-27 05:25:03,820 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 01:25:36] 2025-07-27 05:25:03,820 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 01:25:36] 2025-07-27 05:25:03,820 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 01:25:36] 2025-07-27 05:25:03,820 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 01:25:36] 2025-07-27 05:25:03,820 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 01:25:36] 2025-07-27 05:25:03,820 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 01:25:36] 2025-07-27 05:25:03,820 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 01:25:36] 2025-07-27 05:25:03,820 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 01:25:36] 2025-07-27 05:25:03,820 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 01:25:36] 2025-07-27 05:25:03,820 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 01:25:36] 2025-07-27 05:25:03,820 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 01:25:36] 2025-07-27 05:25:03,821 | INFO     | job 6745851263 has completed (purged errors)
[2025-07-27 01:25:36] 2025-07-27 05:25:03,821 | INFO     | overall cleanup function is called
[2025-07-27 01:25:36] 2025-07-27 05:25:04,829 | INFO     | --- collectZombieJob: --- 10, [1304605]
[2025-07-27 01:25:36] 2025-07-27 05:25:04,829 | INFO     | zombie collector waiting for pid 1304605
[2025-07-27 01:25:36] 2025-07-27 05:25:04,829 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 01:25:36] 2025-07-27 05:25:04,829 | INFO     | collected zombie processes
[2025-07-27 01:25:36] 2025-07-27 05:25:04,829 | INFO     | will attempt to kill all subprocesses of pid=1304605
[2025-07-27 01:25:36] 2025-07-27 05:25:05,270 | INFO     | process IDs to be killed: [1304605] (in reverse order)
[2025-07-27 01:25:36] 2025-07-27 05:25:05,399 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 01:25:36] 2025-07-27 05:25:05,399 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 01:25:36] 2025-07-27 05:25:05,417 | INFO     | did not find any defunct processes belonging to 1304605
[2025-07-27 01:25:36] 2025-07-27 05:25:05,433 | INFO     | did not find any defunct processes belonging to 1304605
[2025-07-27 01:25:36] 2025-07-27 05:25:05,433 | INFO     | ready for new job
[2025-07-27 01:25:36] 2025-07-27 05:25:05,433 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 01:25:36] 2025-07-27 05:25:05,434 | INFO     | ***************************************
[2025-07-27 01:25:36] 2025-07-27 05:25:05,437 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 01:25:36] 2025-07-27 05:25:05,437 | INFO     | ***************************************
[2025-07-27 01:25:36] 2025-07-27 05:25:05,437 | INFO     | 
[2025-07-27 01:25:36] 2025-07-27 05:25:05,455 | INFO     | architecture information:
[2025-07-27 01:25:36] 2025-07-27 05:25:05,456 | INFO     | executing command: cat /etc/os-release
[2025-07-27 01:25:36] 2025-07-27 05:25:05,468 | INFO     | cat /etc/os-release:
[2025-07-27 01:25:36] NAME="CentOS Linux"
[2025-07-27 01:25:36] VERSION="7 (Core)"
[2025-07-27 01:25:36] ID="centos"
[2025-07-27 01:25:36] ID_LIKE="rhel fedora"
[2025-07-27 01:25:36] VERSION_ID="7"
[2025-07-27 01:25:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 01:25:36] ANSI_COLOR="0;31"
[2025-07-27 01:25:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 01:25:36] HOME_URL="https://www.centos.org/"
[2025-07-27 01:25:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 01:25:36] 
[2025-07-27 01:25:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 01:25:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 01:25:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 01:25:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 01:25:36] 
[2025-07-27 01:25:36] 2025-07-27 05:25:05,468 | INFO     | ***************************************
[2025-07-27 01:25:36] 2025-07-27 05:25:05,971 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 01:25:36] 2025-07-27 05:25:05,987 | INFO     | sufficient remaining disk space (75298242560 B)
[2025-07-27 01:25:36] 2025-07-27 05:25:05,987 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 01:25:36] 2025-07-27 05:25:05,987 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 01:25:36] 2025-07-27 05:25:05,987 | INFO     | update_server=False
[2025-07-27 01:25:36] 2025-07-27 05:25:05,987 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 01:25:36] 2025-07-27 05:25:06,095 | INFO     | all data control threads have been joined
[2025-07-27 01:25:36] 2025-07-27 05:25:06,146 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 01:25:36] 2025-07-27 05:25:06,147 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 01:25:36] 2025-07-27 05:25:06,147 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 01:25:36] 2025-07-27 05:25:06,147 | INFO     | will abort loop
[2025-07-27 01:25:36] 2025-07-27 05:25:06,596 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 01:25:36] 2025-07-27 05:25:06,993 | INFO     | [job] retrieve thread has finished
[2025-07-27 01:25:36] 2025-07-27 05:25:07,020 | INFO     | [data] copytool_in thread has finished
[2025-07-27 01:25:36] 2025-07-27 05:25:07,100 | INFO     | [data] control thread has finished
[2025-07-27 01:25:36] 2025-07-27 05:25:07,102 | INFO     | all payload control threads have been joined
[2025-07-27 01:25:36] 2025-07-27 05:25:07,152 | INFO     | [job] job monitor thread has finished
[2025-07-27 01:25:36] 2025-07-27 05:25:07,195 | INFO     | all job control threads have been joined
[2025-07-27 01:25:36] 2025-07-27 05:25:07,974 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 01:25:36] 2025-07-27 05:25:07,990 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 01:25:36] 2025-07-27 05:25:08,054 | INFO     | [job] validate thread has finished
[2025-07-27 01:25:36] 2025-07-27 05:25:08,107 | INFO     | [payload] control thread has finished
[2025-07-27 01:25:36] 2025-07-27 05:25:08,201 | INFO     | [job] control thread has finished
[2025-07-27 01:25:36] 2025-07-27 05:25:08,291 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 01:25:36] 2025-07-27 05:25:08,584 | INFO     | [payload] failed_post thread has finished
[2025-07-27 01:25:36] 2025-07-27 05:25:08,590 | INFO     | [payload] validate_post thread has finished
[2025-07-27 01:25:36] 2025-07-27 05:25:08,602 | INFO     | [data] copytool_out thread has finished
[2025-07-27 01:25:36] 2025-07-27 05:25:08,811 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 01:25:36] 2025-07-27 05:25:09,176 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 01:25:36] 2025-07-27 05:25:09,816 | INFO     | [job] queue monitor thread has finished
[2025-07-27 01:25:36] 2025-07-27 05:25:13,182 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 01:25:36] 2025-07-27 05:25:16,101 | INFO     | job.realtimelogging is not enabled
[2025-07-27 01:25:36] 2025-07-27 05:25:17,106 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 01:25:36] 2025-07-27 05:25:19,142 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139945140680512)>', '<ExcThread(monitor, started 139944639055616)>']
[2025-07-27 01:25:36] 2025-07-27 05:25:24,149 | INFO     | all workflow threads have been joined
[2025-07-27 01:25:36] 2025-07-27 05:25:24,150 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 01:25:36] 2025-07-27 05:25:24,150 | INFO     | traces error code: 0
[2025-07-27 01:25:36] 2025-07-27 05:25:24,150 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 01:25:36] 2025-07-27 05:25:36,412 | INFO     | PID=1294481 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 01:25:36] 2025-07-27 05:25:36,413 | INFO     | .. there are 16 such processes running
[2025-07-27 01:25:36] 2025-07-27 05:25:36,414 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 01:25:36] 2025-07-27 05:25:36,414 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 01:25:36] 2025-07-27 05:25:36,414 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 01:25:36] 2025-07-27 05:25:36,414 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 01:25:36] 2025-07-27 05:25:36,414 | INFO     | [monitor] control thread has ended
[2025-07-27 01:25:36] 2025-07-27 05:25:36,551 [wrapper] ==== pilot stdout END ====
[2025-07-27 01:25:36] 2025-07-27 05:25:36,557 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 01:25:36] 2025-07-27 05:25:36,561 [wrapper] pilotpid: 1294481
[2025-07-27 01:25:36] 2025-07-27 05:25:36,564 [wrapper] Pilot exit status: 0
[2025-07-27 01:25:36] 2025-07-27 05:25:36,580 [wrapper] pandaids: 6745851263
[2025-07-27 01:25:36] 2025-07-27 05:25:36,672 [wrapper] cleanup supervisor_pilot 1511632 1294482
[2025-07-27 01:25:36] 2025-07-27 05:25:36,676 [wrapper] Test setup, not cleaning
[2025-07-27 01:25:36] 2025-07-27 05:25:36,681 [wrapper] apfmon messages muted
[2025-07-27 01:25:36] 2025-07-27 05:25:36,684 [wrapper] ==== wrapper stdout END ====
[2025-07-27 01:25:36] 2025-07-27 05:25:36,687 [wrapper] ==== wrapper stderr END ====
[2025-07-27 01:25:36]  *** Error codes and diagnostics ***
[2025-07-27 01:25:36]     "exeErrorCode": 0,
[2025-07-27 01:25:36]     "exeErrorDiag": "",
[2025-07-27 01:25:36]     "pilotErrorCode": 0,
[2025-07-27 01:25:36]     "pilotErrorDiag": "",
[2025-07-27 01:25:36]  *** Listing of results directory ***
[2025-07-27 01:25:36] total 410272
[2025-07-27 01:25:36] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 18:38 pilot3.tar.gz
[2025-07-27 01:25:36] -rwx------. 1 boincer umatlas     36292 Jul 26 18:50 runpilot2-wrapper.sh
[2025-07-27 01:25:36] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 18:50 queuedata.json
[2025-07-27 01:25:36] -rw-r--r--. 1 boincer umatlas       100 Jul 27 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 01:25:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 00:00 run_atlas
[2025-07-27 01:25:36] -rw-r--r--. 1 boincer umatlas       105 Jul 27 00:00 job.xml
[2025-07-27 01:25:36] -rw-r--r--. 2 boincer umatlas 241814321 Jul 27 00:00 EVNT.45759593._000003.pool.root.1
[2025-07-27 01:25:36] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 00:00 start_atlas.sh
[2025-07-27 01:25:36] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 00:00 shared
[2025-07-27 01:25:36] -rw-r--r--. 2 boincer umatlas    542878 Jul 27 00:00 input.tar.gz
[2025-07-27 01:25:36] -rw-r--r--. 1 boincer umatlas         0 Jul 27 00:00 boinc_lockfile
[2025-07-27 01:25:36] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 00:00 pandaJob.out
[2025-07-27 01:25:36] -rw-------. 1 boincer umatlas    980125 Jul 27 00:01 agis_schedconf.cvmfs.json
[2025-07-27 01:25:36] -rw-------. 1 boincer umatlas   1593052 Jul 27 00:01 agis_ddmendpoints.agis.ALL.json
[2025-07-27 01:25:36] drwx------. 4 boincer umatlas      4096 Jul 27 00:01 pilot3
[2025-07-27 01:25:36] -rw-r--r--. 1 boincer umatlas      6933 Jul 27 01:22 init_data.xml
[2025-07-27 01:25:36] -rw-r--r--. 1 boincer umatlas       529 Jul 27 01:24 boinc_task_state.xml
[2025-07-27 01:25:36] -rw-------. 1 boincer umatlas 172842890 Jul 27 01:24 HITS.45759596._000056.pool.root.1
[2025-07-27 01:25:36] -rw-------. 1 boincer umatlas        95 Jul 27 01:24 pilot_heartbeat.json
[2025-07-27 01:25:36] -rw-------. 1 boincer umatlas      1027 Jul 27 01:24 memory_monitor_summary.json
[2025-07-27 01:25:36] -rw-------. 1 boincer umatlas    301075 Jul 27 01:24 log.45759596._000056.job.log.tgz.1
[2025-07-27 01:25:36] -rw-------. 1 boincer umatlas      7753 Jul 27 01:25 heartbeat.json
[2025-07-27 01:25:36] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 01:25 boinc_mmap_file
[2025-07-27 01:25:36] -rw-r--r--. 1 boincer umatlas        27 Jul 27 01:25 wrapper_checkpoint.txt
[2025-07-27 01:25:36] -rw-------. 1 boincer umatlas       823 Jul 27 01:25 pilotlog.txt
[2025-07-27 01:25:36] -rw-------. 1 boincer umatlas    493472 Jul 27 01:25 log.45759596._000056.job.log.1
[2025-07-27 01:25:36] -rw-------. 1 boincer umatlas       357 Jul 27 01:25 output.list
[2025-07-27 01:25:36] -rw-r--r--. 1 boincer umatlas       620 Jul 27 01:25 runtime_log
[2025-07-27 01:25:36] -rw-------. 1 boincer umatlas    808960 Jul 27 01:25 result.tar.gz
[2025-07-27 01:25:36] -rw-------. 1 boincer umatlas       652 Jul 27 01:25 BeXKDmst2z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEPTLDmvIm9Km.diag
[2025-07-27 01:25:36] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 01:25 runtime_log.err
[2025-07-27 01:25:36] -rw-r--r--. 1 boincer umatlas     21797 Jul 27 01:25 stderr.txt
[2025-07-27 01:25:36] HITS file was successfully produced:
[2025-07-27 01:25:36] -rw-------. 1 boincer umatlas 172842890 Jul 27 01:24 shared/HITS.pool.root.1
[2025-07-27 01:25:36]  *** Contents of shared directory: ***
[2025-07-27 01:25:36] total 406288
[2025-07-27 01:25:36] -rw-r--r--. 2 boincer umatlas 241814321 Jul 27 00:00 ATLAS.root_0
[2025-07-27 01:25:36] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 00:00 start_atlas.sh
[2025-07-27 01:25:36] -rw-r--r--. 2 boincer umatlas    542878 Jul 27 00:00 input.tar.gz
[2025-07-27 01:25:36] -rw-------. 1 boincer umatlas 172842890 Jul 27 01:24 HITS.pool.root.1
[2025-07-27 01:25:36] -rw-------. 1 boincer umatlas    808960 Jul 27 01:25 result.tar.gz
01:25:37 (1289968): run_atlas exited; CPU time 37631.141794
01:25:37 (1289968): called boinc_finish(0)

</stderr_txt>
]]>

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