Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:17 (95654): wrapper (7.7.26015): starting
00:01:17 (95654): wrapper: running run_atlas (--nthreads 10)
[2025-07-27 00:01:18] Arguments: --nthreads 10
[2025-07-27 00:01:18] Threads: 10
[2025-07-27 00:01:18] Checking for CVMFS
[2025-07-27 00:01:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 00:01:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 00:01:18] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 00:01:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 00:01:19] 2.12.6.0 3753 26779 503204 148799 2 334 13258107 21042176 13258 16776704 0 67756861 99.318 131989739 7324 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-27 00:01:19] CVMFS is ok
[2025-07-27 00:01:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 00:01:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 00:01:19] Further information can be found at the LHC@home message board.
[2025-07-27 00:01:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 00:01:19] Checking for apptainer binary...
[2025-07-27 00:01:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 00:01:19] Running /usr/bin/apptainer --version
[2025-07-27 00:01:20] apptainer version 1.4.1-1.el9
[2025-07-27 00:01:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 00:01:21] c-16-10.aglt2.org
[2025-07-27 00:01:21] apptainer works
[2025-07-27 00:01:21] Set ATHENA_PROC_NUMBER=10
[2025-07-27 00:01:21] Set ATHENA_CORE_NUMBER=10
[2025-07-27 00:01:21] Starting ATLAS job with PandaID=6745851265
[2025-07-27 00:01:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 09:29:33]  *** The last 200 lines of the pilot log: ***
[2025-07-27 09:29:33] 2025-07-27 13:28:56,526 | INFO     | PID=99792 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 09:29:33] 2025-07-27 13:28:56,527 | INFO     | .. there are 15 such processes running
[2025-07-27 09:29:33] 2025-07-27 13:28:56,605 | INFO     | monitor loop #1775: job 0:6745851265 is in state 'finished'
[2025-07-27 09:29:33] 2025-07-27 13:28:56,605 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 09:29:33] 2025-07-27 13:28:58,810 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 09:29:33] 2025-07-27 13:28:58,841 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2700.075300000002
[2025-07-27 09:29:33] 2025-07-27 13:28:58,851 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745851265/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 09:29:33] 2025-07-27 13:28:58,853 | INFO     | extracted standard info from prmon json
[2025-07-27 09:29:33] 2025-07-27 13:28:58,853 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 09:29:33] 2025-07-27 13:28:58,854 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 09:29:33] 2025-07-27 13:28:58,855 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 09:29:33] 2025-07-27 13:28:58,855 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 09:29:33] 2025-07-27 13:28:58,873 | INFO     | fitting pss+swap vs Time
[2025-07-27 09:29:33] 2025-07-27 13:28:58,874 | INFO     | sum of square deviations: 53010979640.1549
[2025-07-27 09:29:33] 2025-07-27 13:28:58,889 | INFO     | sum of deviations: 220751603975.46472
[2025-07-27 09:29:33] 2025-07-27 13:28:58,889 | INFO     | mean x: 1753605979.2576578
[2025-07-27 09:29:33] 2025-07-27 13:28:58,890 | INFO     | mean y: 2225786.772972973
[2025-07-27 09:29:33] 2025-07-27 13:28:58,890 | INFO     | -- intersect: -7300248819.239841
[2025-07-27 09:29:33] 2025-07-27 13:28:58,890 | INFO     | intersect: -7300248819.239841
[2025-07-27 09:29:33] 2025-07-27 13:28:58,891 | INFO     | chi2: 3.6207183084399808
[2025-07-27 09:29:33] 2025-07-27 13:28:58,893 | INFO     | sum of square deviations: 51591361249.67467
[2025-07-27 09:29:33] 2025-07-27 13:28:58,904 | INFO     | sum of deviations: 263948678483.9604
[2025-07-27 09:29:33] 2025-07-27 13:28:58,904 | INFO     | mean x: 1753605826.769091
[2025-07-27 09:29:33] 2025-07-27 13:28:58,904 | INFO     | mean y: 2230406.48
[2025-07-27 09:29:33] 2025-07-27 13:28:58,904 | INFO     | -- intersect: -8969464259.948154
[2025-07-27 09:29:33] 2025-07-27 13:28:58,905 | INFO     | intersect: -8969464259.948154
[2025-07-27 09:29:33] 2025-07-27 13:28:58,906 | INFO     | chi2: 2.896072862471995
[2025-07-27 09:29:33] 2025-07-27 13:28:58,906 | INFO     | current chi2=2.896072862471995 (change=20.01385869424915 %)
[2025-07-27 09:29:33] 2025-07-27 13:28:58,906 | INFO     | right removable region: 549
[2025-07-27 09:29:33] 2025-07-27 13:28:58,907 | INFO     | sum of square deviations: 51590935469.67463
[2025-07-27 09:29:33] 2025-07-27 13:28:58,918 | INFO     | sum of deviations: 104247277957.87817
[2025-07-27 09:29:33] 2025-07-27 13:28:58,918 | INFO     | mean x: 1753606131.769091
[2025-07-27 09:29:33] 2025-07-27 13:28:58,918 | INFO     | mean y: 2238274.4163636365
[2025-07-27 09:29:33] 2025-07-27 13:28:58,918 | INFO     | -- intersect: -3541187798.0693283
[2025-07-27 09:29:33] 2025-07-27 13:28:58,919 | INFO     | intersect: -3541187798.0693283
[2025-07-27 09:29:33] 2025-07-27 13:28:58,920 | INFO     | chi2: 1.4069670930834228
[2025-07-27 09:29:33] 2025-07-27 13:28:58,920 | INFO     | current chi2=1.4069670930834228 (change=61.14121637676841 %)
[2025-07-27 09:29:33] 2025-07-27 13:28:58,921 | INFO     | sum of square deviations: 50196473174.0473
[2025-07-27 09:29:33] 2025-07-27 13:28:58,934 | INFO     | sum of deviations: 73367717984.246
[2025-07-27 09:29:33] 2025-07-27 13:28:58,935 | INFO     | mean x: 1753606284.280734
[2025-07-27 09:29:33] 2025-07-27 13:28:58,935 | INFO     | mean y: 2241644.985321101
[2025-07-27 09:29:33] 2025-07-27 13:28:58,935 | INFO     | -- intersect: -2560848611.8622365
[2025-07-27 09:29:33] 2025-07-27 13:28:58,935 | INFO     | intersect: -2560848611.8622365
[2025-07-27 09:29:33] 2025-07-27 13:28:58,937 | INFO     | chi2: 1.2620518144207107
[2025-07-27 09:29:33] 2025-07-27 13:28:58,937 | INFO     | current chi2=1.2620518144207107 (change=10.299834258747637 %)
[2025-07-27 09:29:33] 2025-07-27 13:28:58,937 | INFO     | left removable region: 20
[2025-07-27 09:29:33] 2025-07-27 13:28:58,939 | INFO     | sum of square deviations: 45904037353.53512
[2025-07-27 09:29:33] 2025-07-27 13:28:58,948 | INFO     | sum of deviations: 63532499050.99443
[2025-07-27 09:29:33] 2025-07-27 13:28:58,948 | INFO     | mean x: 1753606406.3119092
[2025-07-27 09:29:33] 2025-07-27 13:28:58,948 | INFO     | mean y: 2252701.381852552
[2025-07-27 09:29:33] 2025-07-27 13:28:58,948 | INFO     | -- intersect: -2424788660.727209
[2025-07-27 09:29:33] 2025-07-27 13:28:58,949 | INFO     | intersect: -2424788660.727209
[2025-07-27 09:29:33] 2025-07-27 13:28:58,950 | INFO     | chi2: 0.2515532311497511
[2025-07-27 09:29:33] 2025-07-27 13:28:58,950 | INFO     | -- intersect: -2424788660.727209
[2025-07-27 09:29:33] 2025-07-27 13:28:58,950 | INFO     | current memory leak: 1.38 B/s (using 529 data points, chi2=0.25)
[2025-07-27 09:29:33] 2025-07-27 13:28:58,952 | INFO     | could have reported an average CPU frequency of 2890 MHz (22 samples)
[2025-07-27 09:29:33] 2025-07-27 13:28:58,952 | INFO     | ..............................
[2025-07-27 09:29:33] 2025-07-27 13:28:58,952 | INFO     | . Timing measurements:
[2025-07-27 09:29:33] 2025-07-27 13:28:58,952 | INFO     | . get job = 0 s
[2025-07-27 09:29:33] 2025-07-27 13:28:58,953 | INFO     | . initial setup = 7 s
[2025-07-27 09:29:33] 2025-07-27 13:28:58,953 | INFO     | . payload setup = 53 s
[2025-07-27 09:29:33] 2025-07-27 13:28:58,953 | INFO     | . stage-in = 0 s
[2025-07-27 09:29:33] 2025-07-27 13:28:58,953 | INFO     | . payload execution = 33837 s
[2025-07-27 09:29:33] 2025-07-27 13:28:58,953 | INFO     | . stage-out = 16 s
[2025-07-27 09:29:33] 2025-07-27 13:28:58,954 | INFO     | . log creation = 0 s
[2025-07-27 09:29:33] 2025-07-27 13:28:58,954 | INFO     | ..............................
[2025-07-27 09:29:33] 2025-07-27 13:28:59,333 | INFO     | 
[2025-07-27 09:29:33] 2025-07-27 13:28:59,338 | INFO     | job summary report
[2025-07-27 09:29:33] 2025-07-27 13:28:59,338 | INFO     | --------------------------------------------------
[2025-07-27 09:29:33] 2025-07-27 13:28:59,338 | INFO     | PanDA job id: 6745851265
[2025-07-27 09:29:33] 2025-07-27 13:28:59,339 | INFO     | task id: 45759596
[2025-07-27 09:29:33] 2025-07-27 13:28:59,339 | INFO     | errors: (none)
[2025-07-27 09:29:33] 2025-07-27 13:28:59,339 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 09:29:33] 2025-07-27 13:28:59,339 | INFO     | pilot state: finished 
[2025-07-27 09:29:33] 2025-07-27 13:28:59,339 | INFO     | transexitcode: 0
[2025-07-27 09:29:33] 2025-07-27 13:28:59,339 | INFO     | exeerrorcode: 0
[2025-07-27 09:29:33] 2025-07-27 13:28:59,339 | INFO     | exeerrordiag: 
[2025-07-27 09:29:33] 2025-07-27 13:28:59,340 | INFO     | exitcode: 0
[2025-07-27 09:29:33] 2025-07-27 13:28:59,340 | INFO     | exitmsg: OK
[2025-07-27 09:29:33] 2025-07-27 13:28:59,340 | INFO     | cpuconsumptiontime: 107695 s
[2025-07-27 09:29:33] 2025-07-27 13:28:59,340 | INFO     | nevents: 400
[2025-07-27 09:29:33] 2025-07-27 13:28:59,340 | INFO     | neventsw: 0
[2025-07-27 09:29:33] 2025-07-27 13:28:59,340 | INFO     | pid: 108617
[2025-07-27 09:29:33] 2025-07-27 13:28:59,340 | INFO     | pgrp: 108617
[2025-07-27 09:29:33] 2025-07-27 13:28:59,341 | INFO     | corecount: 10
[2025-07-27 09:29:33] 2025-07-27 13:28:59,341 | INFO     | event service: False
[2025-07-27 09:29:33] 2025-07-27 13:28:59,341 | INFO     | sizes: {0: 2396641, 1: 2397242, 2: 2397411, 3: 2397553, 4: 2397553, 15: 2397581, 25: 2397737, 36: 2398027, 37: 2398055, 33895: 2436761, 33912: 2445759, 33913: 2446
[2025-07-27 09:29:33] 2025-07-27 13:28:59,341 | INFO     | --------------------------------------------------
[2025-07-27 09:29:33] 2025-07-27 13:28:59,341 | INFO     | 
[2025-07-27 09:29:33] 2025-07-27 13:28:59,346 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 09:29:33] 2025-07-27 13:28:59,560 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 09:29:33] 2025-07-27 13:28:59,560 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 09:29:33] 2025-07-27 13:28:59,560 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 09:29:33] 2025-07-27 13:28:59,560 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 09:29:33] 2025-07-27 13:28:59,561 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 09:29:33] 2025-07-27 13:28:59,561 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 09:29:33] 2025-07-27 13:28:59,561 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 09:29:33] 2025-07-27 13:28:59,561 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 09:29:33] 2025-07-27 13:28:59,561 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 09:29:33] 2025-07-27 13:28:59,562 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 09:29:33] 2025-07-27 13:28:59,562 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 09:29:33] 2025-07-27 13:28:59,562 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 09:29:33] 2025-07-27 13:28:59,562 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 09:29:33] 2025-07-27 13:28:59,562 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 09:29:33] 2025-07-27 13:28:59,562 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 09:29:33] 2025-07-27 13:28:59,577 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 09:29:33] 2025-07-27 13:28:59,577 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 09:29:33] 2025-07-27 13:28:59,577 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 09:29:33] 2025-07-27 13:28:59,577 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 09:29:33] 2025-07-27 13:28:59,578 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 09:29:33] 2025-07-27 13:28:59,578 | INFO     | job 6745851265 has completed (purged errors)
[2025-07-27 09:29:33] 2025-07-27 13:28:59,578 | INFO     | overall cleanup function is called
[2025-07-27 09:29:33] 2025-07-27 13:29:00,593 | INFO     | --- collectZombieJob: --- 10, [108617]
[2025-07-27 09:29:33] 2025-07-27 13:29:00,593 | INFO     | zombie collector waiting for pid 108617
[2025-07-27 09:29:33] 2025-07-27 13:29:00,593 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 09:29:33] 2025-07-27 13:29:00,594 | INFO     | collected zombie processes
[2025-07-27 09:29:33] 2025-07-27 13:29:00,594 | INFO     | will attempt to kill all subprocesses of pid=108617
[2025-07-27 09:29:33] 2025-07-27 13:29:01,357 | INFO     | process IDs to be killed: [108617] (in reverse order)
[2025-07-27 09:29:33] 2025-07-27 13:29:01,932 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 09:29:33] 2025-07-27 13:29:01,932 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 09:29:33] 2025-07-27 13:29:01,998 | INFO     | did not find any defunct processes belonging to 108617
[2025-07-27 09:29:33] 2025-07-27 13:29:02,046 | INFO     | did not find any defunct processes belonging to 108617
[2025-07-27 09:29:33] 2025-07-27 13:29:02,047 | INFO     | ready for new job
[2025-07-27 09:29:33] 2025-07-27 13:29:02,047 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 09:29:33] 2025-07-27 13:29:02,057 | INFO     | ***************************************
[2025-07-27 09:29:33] 2025-07-27 13:29:02,057 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 09:29:33] 2025-07-27 13:29:02,057 | INFO     | ***************************************
[2025-07-27 09:29:33] 2025-07-27 13:29:02,058 | INFO     | 
[2025-07-27 09:29:33] 2025-07-27 13:29:02,073 | INFO     | architecture information:
[2025-07-27 09:29:33] 2025-07-27 13:29:02,080 | INFO     | executing command: cat /etc/os-release
[2025-07-27 09:29:33] 2025-07-27 13:29:02,204 | INFO     | cat /etc/os-release:
[2025-07-27 09:29:33] NAME="CentOS Linux"
[2025-07-27 09:29:33] VERSION="7 (Core)"
[2025-07-27 09:29:33] ID="centos"
[2025-07-27 09:29:33] ID_LIKE="rhel fedora"
[2025-07-27 09:29:33] VERSION_ID="7"
[2025-07-27 09:29:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 09:29:33] ANSI_COLOR="0;31"
[2025-07-27 09:29:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 09:29:33] HOME_URL="https://www.centos.org/"
[2025-07-27 09:29:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 09:29:33] 
[2025-07-27 09:29:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 09:29:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 09:29:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 09:29:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 09:29:33] 
[2025-07-27 09:29:33] 2025-07-27 13:29:02,205 | INFO     | ***************************************
[2025-07-27 09:29:33] 2025-07-27 13:29:02,708 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 09:29:33] 2025-07-27 13:29:02,849 | INFO     | sufficient remaining disk space (53810823168 B)
[2025-07-27 09:29:33] 2025-07-27 13:29:02,850 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 09:29:33] 2025-07-27 13:29:02,850 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 09:29:33] 2025-07-27 13:29:02,850 | INFO     | update_server=False
[2025-07-27 09:29:33] 2025-07-27 13:29:02,851 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 09:29:33] 2025-07-27 13:29:02,851 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 09:29:33] 2025-07-27 13:29:02,851 | INFO     | aborting loop
[2025-07-27 09:29:33] 2025-07-27 13:29:02,851 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 09:29:33] 2025-07-27 13:29:02,969 | INFO     | all job control threads have been joined
[2025-07-27 09:29:33] 2025-07-27 13:29:03,542 | INFO     | all data control threads have been joined
[2025-07-27 09:29:33] 2025-07-27 13:29:03,861 | INFO     | [job] retrieve thread has finished
[2025-07-27 09:29:33] 2025-07-27 13:29:03,862 | INFO     | [job] job monitor thread has finished
[2025-07-27 09:29:33] 2025-07-27 13:29:03,866 | INFO     | all payload control threads have been joined
[2025-07-27 09:29:33] 2025-07-27 13:29:03,897 | INFO     | [data] copytool_in thread has finished
[2025-07-27 09:29:33] 2025-07-27 13:29:03,940 | INFO     | [payload] validate_post thread has finished
[2025-07-27 09:29:33] 2025-07-27 13:29:03,975 | INFO     | [job] control thread has finished
[2025-07-27 09:29:33] 2025-07-27 13:29:04,231 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 09:29:33] 2025-07-27 13:29:04,352 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 09:29:33] 2025-07-27 13:29:04,548 | INFO     | [data] control thread has finished
[2025-07-27 09:29:33] 2025-07-27 13:29:04,737 | INFO     | [payload] failed_post thread has finished
[2025-07-27 09:29:33] 2025-07-27 13:29:04,747 | INFO     | [job] validate thread has finished
[2025-07-27 09:29:33] 2025-07-27 13:29:04,748 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 09:29:33] 2025-07-27 13:29:04,748 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 09:29:33] 2025-07-27 13:29:04,761 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 09:29:33] 2025-07-27 13:29:04,872 | INFO     | [payload] control thread has finished
[2025-07-27 09:29:33] 2025-07-27 13:29:05,250 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 09:29:33] 2025-07-27 13:29:05,358 | INFO     | [job] queue monitor thread has finished
[2025-07-27 09:29:33] 2025-07-27 13:29:06,238 | INFO     | [data] copytool_out thread has finished
[2025-07-27 09:29:33] 2025-07-27 13:29:06,861 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 09:29:33] 2025-07-27 13:29:08,857 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140527898982208)>', '<ExcThread(monitor, started 140527395645184)>']
[2025-07-27 09:29:33] 2025-07-27 13:29:13,883 | INFO     | all workflow threads have been joined
[2025-07-27 09:29:33] 2025-07-27 13:29:13,883 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 09:29:33] 2025-07-27 13:29:13,886 | INFO     | traces error code: 0
[2025-07-27 09:29:33] 2025-07-27 13:29:13,907 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 09:29:33] 2025-07-27 13:29:31,828 | INFO     | PID=99792 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 09:29:33] 2025-07-27 13:29:31,829 | INFO     | .. there are 15 such processes running
[2025-07-27 09:29:33] 2025-07-27 13:29:31,830 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 09:29:33] 2025-07-27 13:29:31,830 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 09:29:33] 2025-07-27 13:29:31,831 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 09:29:33] 2025-07-27 13:29:31,831 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 09:29:33] 2025-07-27 13:29:31,831 | INFO     | [monitor] control thread has ended
[2025-07-27 09:29:33] 2025-07-27 13:29:32,098 [wrapper] ==== pilot stdout END ====
[2025-07-27 09:29:33] 2025-07-27 13:29:32,131 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 09:29:33] 2025-07-27 13:29:32,158 [wrapper] pilotpid: 99792
[2025-07-27 09:29:33] 2025-07-27 13:29:32,182 [wrapper] Pilot exit status: 0
[2025-07-27 09:29:33] 2025-07-27 13:29:32,346 [wrapper] pandaids: 6745851265
[2025-07-27 09:29:33] 2025-07-27 13:29:32,718 [wrapper] cleanup supervisor_pilot 2093923 99793
[2025-07-27 09:29:33] 2025-07-27 13:29:32,762 [wrapper] Test setup, not cleaning
[2025-07-27 09:29:33] 2025-07-27 13:29:32,809 [wrapper] apfmon messages muted
[2025-07-27 09:29:33] 2025-07-27 13:29:32,872 [wrapper] ==== wrapper stdout END ====
[2025-07-27 09:29:33] 2025-07-27 13:29:32,918 [wrapper] ==== wrapper stderr END ====
[2025-07-27 09:29:33]  *** Error codes and diagnostics ***
[2025-07-27 09:29:33]     "exeErrorCode": 0,
[2025-07-27 09:29:33]     "exeErrorDiag": "",
[2025-07-27 09:29:33]     "pilotErrorCode": 0,
[2025-07-27 09:29:33]     "pilotErrorDiag": "",
[2025-07-27 09:29:33]  *** Listing of results directory ***
[2025-07-27 09:29:33] total 420252
[2025-07-27 09:29:33] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 18:38 pilot3.tar.gz
[2025-07-27 09:29:33] -rwx------. 1 boincer umatlas     36292 Jul 26 18:50 runpilot2-wrapper.sh
[2025-07-27 09:29:33] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 18:50 queuedata.json
[2025-07-27 09:29:33] -rw-r--r--. 1 boincer umatlas       100 Jul 27 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 09:29:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 27 00:01 run_atlas
[2025-07-27 09:29:33] -rw-r--r--. 1 boincer umatlas       105 Jul 27 00:01 job.xml
[2025-07-27 09:29:33] -rw-r--r--. 2 boincer umatlas 241814321 Jul 27 00:01 EVNT.45759593._000003.pool.root.1
[2025-07-27 09:29:33] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 00:01 start_atlas.sh
[2025-07-27 09:29:33] drwxrwx--x. 2 boincer umatlas      4096 Jul 27 00:01 shared
[2025-07-27 09:29:33] -rw-r--r--. 2 boincer umatlas    542875 Jul 27 00:01 input.tar.gz
[2025-07-27 09:29:33] -rw-r--r--. 1 boincer umatlas         0 Jul 27 00:01 boinc_lockfile
[2025-07-27 09:29:33] -rw-r--r--. 1 boincer umatlas      2562 Jul 27 00:01 pandaJob.out
[2025-07-27 09:29:33] -rw-------. 1 boincer umatlas    980125 Jul 27 00:02 agis_schedconf.cvmfs.json
[2025-07-27 09:29:33] drwx------. 4 boincer umatlas      4096 Jul 27 00:02 pilot3
[2025-07-27 09:29:33] -rw-r--r--. 1 boincer umatlas      6521 Jul 27 09:19 init_data.xml
[2025-07-27 09:29:33] -rw-------. 1 boincer umatlas 178639080 Jul 27 09:27 HITS.45759596._000058.pool.root.1
[2025-07-27 09:29:33] -rw-r--r--. 1 boincer umatlas       532 Jul 27 09:27 boinc_task_state.xml
[2025-07-27 09:29:33] -rw-------. 1 boincer umatlas      1037 Jul 27 09:28 memory_monitor_summary.json
[2025-07-27 09:29:33] -rw-------. 1 boincer umatlas   1593052 Jul 27 09:28 agis_ddmendpoints.agis.ALL.json
[2025-07-27 09:29:33] -rw-------. 1 boincer umatlas    569779 Jul 27 09:28 log.45759596._000058.job.log.tgz.1
[2025-07-27 09:29:33] -rw-------. 1 boincer umatlas      7811 Jul 27 09:28 heartbeat.json
[2025-07-27 09:29:33] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 09:29 boinc_mmap_file
[2025-07-27 09:29:33] -rw-r--r--. 1 boincer umatlas        29 Jul 27 09:29 wrapper_checkpoint.txt
[2025-07-27 09:29:33] -rw-------. 1 boincer umatlas        95 Jul 27 09:29 pilot_heartbeat.json
[2025-07-27 09:29:33] -rw-------. 1 boincer umatlas       821 Jul 27 09:29 pilotlog.txt
[2025-07-27 09:29:33] -rw-------. 1 boincer umatlas   2435878 Jul 27 09:29 log.45759596._000058.job.log.1
[2025-07-27 09:29:33] -rw-------. 1 boincer umatlas       357 Jul 27 09:29 output.list
[2025-07-27 09:29:33] -rw-r--r--. 1 boincer umatlas       620 Jul 27 09:29 runtime_log
[2025-07-27 09:29:33] -rw-------. 1 boincer umatlas   3020800 Jul 27 09:29 result.tar.gz
[2025-07-27 09:29:33] -rw-------. 1 boincer umatlas       660 Jul 27 09:29 wJbKDmst2z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGPTLDmqr8e5m.diag
[2025-07-27 09:29:33] -rw-r--r--. 1 boincer umatlas      8658 Jul 27 09:29 runtime_log.err
[2025-07-27 09:29:33] -rw-r--r--. 1 boincer umatlas     21332 Jul 27 09:29 stderr.txt
[2025-07-27 09:29:33] HITS file was successfully produced:
[2025-07-27 09:29:33] -rw-------. 1 boincer umatlas 178639080 Jul 27 09:27 shared/HITS.pool.root.1
[2025-07-27 09:29:33]  *** Contents of shared directory: ***
[2025-07-27 09:29:33] total 414108
[2025-07-27 09:29:33] -rw-r--r--. 2 boincer umatlas 241814321 Jul 27 00:01 ATLAS.root_0
[2025-07-27 09:29:33] -rw-r--r--. 2 boincer umatlas     15095 Jul 27 00:01 start_atlas.sh
[2025-07-27 09:29:33] -rw-r--r--. 2 boincer umatlas    542875 Jul 27 00:01 input.tar.gz
[2025-07-27 09:29:33] -rw-------. 1 boincer umatlas 178639080 Jul 27 09:27 HITS.pool.root.1
[2025-07-27 09:29:33] -rw-------. 1 boincer umatlas   3020800 Jul 27 09:29 result.tar.gz
09:29:34 (95654): run_atlas exited; CPU time 108898.594422
09:29:34 (95654): called boinc_finish(0)

</stderr_txt>
]]>

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