Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:00:21 (3580411): wrapper (7.7.26015): starting
21:00:21 (3580411): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 21:00:21] Arguments: --nthreads 8
[2025-07-26 21:00:21] Threads: 8
[2025-07-26 21:00:21] Checking for CVMFS
[2025-07-26 21:00:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 21:00:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 21:00:21] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 21:00:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 21:00:22] 2.11.3.0 3635679 298012 254300 148799 3 515 33482366 45568000 10544 130560 0 1803461334 99.749 1572134576 18602 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-07-26 21:00:22] CVMFS is ok
[2025-07-26 21:00:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 21:00:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 21:00:22] Further information can be found at the LHC@home message board.
[2025-07-26 21:00:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 21:00:22] Checking for apptainer binary...
[2025-07-26 21:00:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 21:00:22] Running /usr/bin/apptainer --version
[2025-07-26 21:00:22] apptainer version 1.3.3-1.el9
[2025-07-26 21:00:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 21:00:22] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0008.triumf.lcg
[2025-07-26 21:00:22] apptainer works
[2025-07-26 21:00:22] Set ATHENA_PROC_NUMBER=8
[2025-07-26 21:00:22] Set ATHENA_CORE_NUMBER=8
[2025-07-26 21:00:22] Starting ATLAS job with PandaID=6745940022
[2025-07-26 21:00:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 21:03:46]  *** The last 200 lines of the pilot log: ***
[2025-07-26 21:03:46] 2025-07-27 04:03:14,064 | WARNING  | found no stored workdir sizes
[2025-07-26 21:03:46] 2025-07-27 04:03:14,064 | INFO     | will not add max space = 0 B to job metrics
[2025-07-26 21:03:46] 2025-07-27 04:03:14,064 | WARNING  | wrong length of table data, x=[1753588856.0], y=[1125.0] (must be same and length>=4)
[2025-07-26 21:03:46] 2025-07-27 04:03:14,064 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | ..............................
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | . Timing measurements:
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | . get job = 0 s
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | . initial setup = 2 s
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | . payload setup = 4 s
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | . stage-in = 0 s
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | . payload execution = 15 s
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | . stage-out = 0 s
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | . log creation = 0 s
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | ..............................
[2025-07-26 21:03:46] 2025-07-27 04:03:14,066 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 21:03:46] 2025-07-27 04:03:14,066 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745940022/pilotlog.txt
[2025-07-26 21:03:46] 2025-07-27 04:03:14,077 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-26 21:03:46] - Log from pilotlog.txt -
[2025-07-26 21:03:46] 2025-07-27 04:03:14,063 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 21:03:46] 2025-07-27 04:03:14,063 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 21:03:46] 2025-07-27 04:03:14,063 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 21:03:46] 2025-07-27 04:03:14,063 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 21:03:46] 2025-07-27 04:03:14,064 | WARNING  | found no stored workdir sizes
[2025-07-26 21:03:46] 2025-07-27 04:03:14,064 | INFO     | will not add max space = 0 B to job metrics
[2025-07-26 21:03:46] 2025-07-27 04:03:14,064 | WARNING  | wrong length of table data, x=[1753588856.0], y=[1125.0] (must be same and length>=4)
[2025-07-26 21:03:46] 2025-07-27 04:03:14,064 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | ..............................
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | . Timing measurements:
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | . get job = 0 s
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | . initial setup = 2 s
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | . payload setup = 4 s
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | . stage-in = 0 s
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | . payload execution = 15 s
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | . stage-out = 0 s
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | . log creation = 0 s
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | ..............................
[2025-07-26 21:03:46] 2025-07-27 04:03:14,066 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 21:03:46] 2025-07-27 04:03:14,066 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745940022/pilotlog.txt
[2025-07-26 21:03:46] 2025-07-27 04:03:14,077 | WARNING  | 
[2025-07-26 21:03:46] [begin log extracts]
[2025-07-26 21:03:46] - Log from pilotlog.txt -
[2025-07-26 21:03:46] 2025-07-27 04:03:14,063 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 21:03:46] 2025-07-27 04:03:14,063 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 21:03:46] 2025-07-27 04:03:14,063 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 21:03:46] 2025-07-27 04:03:14,063 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 21:03:46] 2025-07-27 04:03:14,064 | WARNING  | found no stored workdir sizes
[2025-07-26 21:03:46] 2025-07-27 04:03:14,064 | INFO     | will not add max space = 0 B to job metrics
[2025-07-26 21:03:46] 2025-07-27 04:03:14,064 | WARNING  | wrong length of table data, x=[1753588856.0], y=[1125.0] (must be same and length>=4)
[2025-07-26 21:03:46] 2025-07-27 04:03:14,064 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | ..............................
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | . Timing measurements:
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | . get job = 0 s
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | . initial setup = 2 s
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | . payload setup = 4 s
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | . stage-in = 0 s
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | . payload execution = 15 s
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | . stage-out = 0 s
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | . log creation = 0 s
[2025-07-26 21:03:46] 2025-07-27 04:03:14,065 | INFO     | ..............................
[2025-07-26 21:03:46] 2025-07-27 04:03:14,066 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 21:03:46] 2025-07-27 04:03:14,066 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745940022/pilotlog.txt
[2025-07-26 21:03:46] [end log extracts]
[2025-07-26 21:03:46] 2025-07-27 04:03:14,077 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-26 21:03:46] 2025-07-27 04:03:14,078 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-26 21:03:46] 2025-07-27 04:03:14,211 | INFO     | 
[2025-07-26 21:03:46] 2025-07-27 04:03:14,212 | INFO     | job summary report
[2025-07-26 21:03:46] 2025-07-27 04:03:14,212 | INFO     | --------------------------------------------------
[2025-07-26 21:03:46] 2025-07-27 04:03:14,212 | INFO     | PanDA job id: 6745940022
[2025-07-26 21:03:46] 2025-07-27 04:03:14,212 | INFO     | task id: 45759799
[2025-07-26 21:03:46] 2025-07-27 04:03:14,212 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-26 21:01:03,927 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-26 21:03:46] 2025-07-27 04:03:14,212 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 21:03:46] 2025-07-27 04:03:14,212 | INFO     | pilot state: failed 
[2025-07-26 21:03:46] 2025-07-27 04:03:14,212 | INFO     | transexitcode: 65
[2025-07-26 21:03:46] 2025-07-27 04:03:14,212 | INFO     | exeerrorcode: 65
[2025-07-26 21:03:46] 2025-07-27 04:03:14,212 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-26 21:03:46] 2025-07-27 04:03:14,212 | INFO     | exitcode: 65
[2025-07-26 21:03:46] 2025-07-27 04:03:14,212 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-26 21:03:46] 2025-07-27 04:03:14,213 | INFO     | cpuconsumptiontime: 16 s
[2025-07-26 21:03:46] 2025-07-27 04:03:14,213 | INFO     | nevents: 0
[2025-07-26 21:03:46] 2025-07-27 04:03:14,213 | INFO     | neventsw: 0
[2025-07-26 21:03:46] 2025-07-27 04:03:14,213 | INFO     | pid: 3597537
[2025-07-26 21:03:46] 2025-07-27 04:03:14,213 | INFO     | pgrp: 3597537
[2025-07-26 21:03:46] 2025-07-27 04:03:14,213 | INFO     | corecount: 8
[2025-07-26 21:03:46] 2025-07-27 04:03:14,213 | INFO     | event service: False
[2025-07-26 21:03:46] 2025-07-27 04:03:14,213 | INFO     | sizes: {0: 2397458, 4: 2397720, 11: 2397748, 24: 2425284, 27: 2425284, 147: 2425450}
[2025-07-26 21:03:46] 2025-07-27 04:03:14,213 | INFO     | --------------------------------------------------
[2025-07-26 21:03:46] 2025-07-27 04:03:14,213 | INFO     | 
[2025-07-26 21:03:46] 2025-07-27 04:03:14,213 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-26 21:03:46] 2025-07-27 04:03:14,230 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 21:03:46] 2025-07-27 04:03:14,230 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 21:03:46] 2025-07-27 04:03:14,230 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 21:03:46] 2025-07-27 04:03:14,230 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 21:03:46] 2025-07-27 04:03:14,230 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 21:03:46] 2025-07-27 04:03:14,230 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 21:03:46] 2025-07-27 04:03:14,231 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 21:03:46] 2025-07-27 04:03:14,231 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 21:03:46] 2025-07-27 04:03:14,231 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 21:03:46] 2025-07-27 04:03:14,231 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 21:03:46] 2025-07-27 04:03:14,231 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 21:03:46] 2025-07-27 04:03:14,231 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 21:03:46] 2025-07-27 04:03:14,231 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 21:03:46] 2025-07-27 04:03:14,231 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 21:03:46] 2025-07-27 04:03:14,231 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 21:03:46] 2025-07-27 04:03:14,231 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 21:03:46] 2025-07-27 04:03:14,231 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 21:03:46] 2025-07-27 04:03:14,231 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 21:03:46] 2025-07-27 04:03:14,231 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 21:03:46] 2025-07-27 04:03:14,232 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 21:03:46] 2025-07-27 04:03:14,232 | INFO     | job 6745940022 has completed (purged errors)
[2025-07-26 21:03:46] 2025-07-27 04:03:14,232 | INFO     | overall cleanup function is called
[2025-07-26 21:03:46] 2025-07-27 04:03:15,237 | INFO     | --- collectZombieJob: --- 10, [3597537]
[2025-07-26 21:03:46] 2025-07-27 04:03:15,237 | INFO     | zombie collector waiting for pid 3597537
[2025-07-26 21:03:46] 2025-07-27 04:03:15,238 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 21:03:46] 2025-07-27 04:03:15,238 | INFO     | collected zombie processes
[2025-07-26 21:03:46] 2025-07-27 04:03:15,238 | INFO     | will attempt to kill all subprocesses of pid=3597537
[2025-07-26 21:03:46] 2025-07-27 04:03:15,414 | INFO     | process IDs to be killed: [3597537] (in reverse order)
[2025-07-26 21:03:46] 2025-07-27 04:03:15,471 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 21:03:46] 2025-07-27 04:03:15,472 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 21:03:46] 2025-07-27 04:03:15,478 | INFO     | did not find any defunct processes belonging to 3597537
[2025-07-26 21:03:46] 2025-07-27 04:03:15,483 | INFO     | did not find any defunct processes belonging to 3597537
[2025-07-26 21:03:46] 2025-07-27 04:03:15,483 | INFO     | ready for new job
[2025-07-26 21:03:46] 2025-07-27 04:03:15,483 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 21:03:46] 2025-07-27 04:03:15,485 | INFO     | ***************************************
[2025-07-26 21:03:46] 2025-07-27 04:03:15,485 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 21:03:46] 2025-07-27 04:03:15,485 | INFO     | ***************************************
[2025-07-26 21:03:46] 2025-07-27 04:03:15,485 | INFO     | 
[2025-07-26 21:03:46] 2025-07-27 04:03:15,499 | INFO     | architecture information:
[2025-07-26 21:03:46] 2025-07-27 04:03:15,499 | INFO     | executing command: cat /etc/os-release
[2025-07-26 21:03:46] 2025-07-27 04:03:15,510 | INFO     | cat /etc/os-release:
[2025-07-26 21:03:46] NAME="CentOS Linux"
[2025-07-26 21:03:46] VERSION="7 (Core)"
[2025-07-26 21:03:46] ID="centos"
[2025-07-26 21:03:46] ID_LIKE="rhel fedora"
[2025-07-26 21:03:46] VERSION_ID="7"
[2025-07-26 21:03:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 21:03:46] ANSI_COLOR="0;31"
[2025-07-26 21:03:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 21:03:46] HOME_URL="https://www.centos.org/"
[2025-07-26 21:03:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 21:03:46] 
[2025-07-26 21:03:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 21:03:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 21:03:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 21:03:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 21:03:46] 
[2025-07-26 21:03:46] 2025-07-27 04:03:15,511 | INFO     | ***************************************
[2025-07-26 21:03:46] 2025-07-27 04:03:16,014 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-26 21:03:46] 2025-07-27 04:03:16,027 | INFO     | sufficient remaining disk space (1390769340416 B)
[2025-07-26 21:03:46] 2025-07-27 04:03:16,027 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 21:03:46] 2025-07-27 04:03:16,028 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 21:03:46] 2025-07-27 04:03:16,028 | INFO     | update_server=False
[2025-07-26 21:03:46] 2025-07-27 04:03:16,028 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 21:03:46] 2025-07-27 04:03:16,028 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 21:03:46] 2025-07-27 04:03:16,421 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 21:03:46] 2025-07-27 04:03:16,421 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 21:03:46] 2025-07-27 04:03:16,422 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 21:03:46] 2025-07-27 04:03:16,422 | INFO     | will abort loop
[2025-07-26 21:03:46] 2025-07-27 04:03:16,738 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 21:03:46] 2025-07-27 04:03:16,889 | INFO     | all job control threads have been joined
[2025-07-26 21:03:46] 2025-07-27 04:03:16,936 | INFO     | all data control threads have been joined
[2025-07-26 21:03:46] 2025-07-27 04:03:16,971 | INFO     | all payload control threads have been joined
[2025-07-26 21:03:46] 2025-07-27 04:03:17,032 | INFO     | [job] retrieve thread has finished
[2025-07-26 21:03:46] 2025-07-27 04:03:17,033 | INFO     | [job] queue monitor thread has finished
[2025-07-26 21:03:46] 2025-07-27 04:03:17,161 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 21:03:46] 2025-07-27 04:03:17,378 | INFO     | [payload] validate_post thread has finished
[2025-07-26 21:03:46] 2025-07-27 04:03:17,426 | INFO     | [job] job monitor thread has finished
[2025-07-26 21:03:46] 2025-07-27 04:03:17,465 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 21:03:46] 2025-07-27 04:03:17,698 | INFO     | [data] copytool_in thread has finished
[2025-07-26 21:03:46] 2025-07-27 04:03:17,894 | INFO     | [job] control thread has finished
[2025-07-26 21:03:46] 2025-07-27 04:03:17,909 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 21:03:46] 2025-07-27 04:03:17,941 | INFO     | [data] control thread has finished
[2025-07-26 21:03:46] 2025-07-27 04:03:17,976 | INFO     | [payload] control thread has finished
[2025-07-26 21:03:46] 2025-07-27 04:03:18,216 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 21:03:46] 2025-07-27 04:03:18,306 | INFO     | [job] validate thread has finished
[2025-07-26 21:03:46] 2025-07-27 04:03:18,397 | INFO     | [payload] failed_post thread has finished
[2025-07-26 21:03:46] 2025-07-27 04:03:18,509 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 21:03:46] 2025-07-27 04:03:18,744 | INFO     | [data] copytool_out thread has finished
[2025-07-26 21:03:46] 2025-07-27 04:03:21,471 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 21:03:46] 2025-07-27 04:03:23,200 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139721564780352)>', '<ExcThread(monitor, started 139721149753088)>']
[2025-07-26 21:03:46] 2025-07-27 04:03:28,225 | INFO     | all workflow threads have been joined
[2025-07-26 21:03:46] 2025-07-27 04:03:28,226 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 21:03:46] 2025-07-27 04:03:28,226 | INFO     | traces error code: 0
[2025-07-26 21:03:46] 2025-07-27 04:03:28,226 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 21:03:46] 2025-07-27 04:03:46,688 | INFO     | PID=3584006 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 21:03:46] 2025-07-27 04:03:46,688 | INFO     | .. there are 19 such processes running
[2025-07-26 21:03:46] 2025-07-27 04:03:46,689 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 21:03:46] 2025-07-27 04:03:46,689 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 21:03:46] 2025-07-27 04:03:46,689 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 21:03:46] 2025-07-27 04:03:46,689 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 21:03:46] 2025-07-27 04:03:46,689 | INFO     | [monitor] control thread has ended
[2025-07-26 21:03:46] 2025-07-27 04:03:46,807 [wrapper] ==== pilot stdout END ====
[2025-07-26 21:03:46] 2025-07-27 04:03:46,810 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 21:03:46] 2025-07-27 04:03:46,812 [wrapper] pilotpid: 3584006
[2025-07-26 21:03:46] 2025-07-27 04:03:46,815 [wrapper] Pilot exit status: 0
[2025-07-26 21:03:46] 2025-07-27 04:03:46,824 [wrapper] pandaids: 6745940022
[2025-07-26 21:03:46] 2025-07-27 04:03:46,859 [wrapper] cleanup supervisor_pilot 3584012 3584007
[2025-07-26 21:03:46] 2025-07-27 04:03:46,861 [wrapper] Test setup, not cleaning
[2025-07-26 21:03:46] 2025-07-27 04:03:46,864 [wrapper] apfmon messages muted
[2025-07-26 21:03:46] 2025-07-27 04:03:46,866 [wrapper] ==== wrapper stdout END ====
[2025-07-26 21:03:46] 2025-07-27 04:03:46,867 [wrapper] ==== wrapper stderr END ====
[2025-07-26 21:03:46]  *** Error codes and diagnostics ***
[2025-07-26 21:03:46]     "exeErrorCode": 65,
[2025-07-26 21:03:46]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-26 21:03:46]     "pilotErrorCode": 1305,
[2025-07-26 21:03:46]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-26 21:03:46]  *** Listing of results directory ***
[2025-07-26 21:03:46] total 235008
[2025-07-26 21:03:46] -rw-r--r--. 1 boinc boinc    530466 Jul 26 18:23 pilot3.tar.gz
[2025-07-26 21:03:46] -rwx------. 1 boinc boinc     36292 Jul 26 18:25 runpilot2-wrapper.sh
[2025-07-26 21:03:46] -rw-r--r--. 1 boinc boinc      5112 Jul 26 18:25 queuedata.json
[2025-07-26 21:03:46] -rw-r--r--. 1 boinc boinc       100 Jul 26 21:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 21:03:46] -rwxr-xr-x. 1 boinc boinc      7986 Jul 26 21:00 run_atlas
[2025-07-26 21:03:46] -rw-r--r--. 1 boinc boinc       105 Jul 26 21:00 job.xml
[2025-07-26 21:03:46] -rw-r--r--. 2 boinc boinc 236581898 Jul 26 21:00 EVNT.45759797._000002.pool.root.1
[2025-07-26 21:03:46] -rw-r--r--. 1 boinc boinc      6447 Jul 26 21:00 init_data.xml
[2025-07-26 21:03:46] -rw-r--r--. 2 boinc boinc     15095 Jul 26 21:00 start_atlas.sh
[2025-07-26 21:03:46] drwxrwx--x. 2 boinc boinc      4096 Jul 26 21:00 shared
[2025-07-26 21:03:46] -rw-r--r--. 2 boinc boinc    542877 Jul 26 21:00 input.tar.gz
[2025-07-26 21:03:46] -rw-r--r--. 1 boinc boinc         0 Jul 26 21:00 boinc_lockfile
[2025-07-26 21:03:46] -rw-r--r--. 1 boinc boinc      2554 Jul 26 21:00 pandaJob.out
[2025-07-26 21:03:46] -rw-------. 1 boinc boinc    980125 Jul 26 21:00 agis_schedconf.cvmfs.json
[2025-07-26 21:03:46] -rw-------. 1 boinc boinc   1593052 Jul 26 21:00 agis_ddmendpoints.agis.ALL.json
[2025-07-26 21:03:46] drwx------. 4 boinc boinc      4096 Jul 26 21:00 pilot3
[2025-07-26 21:03:46] -rw-r--r--. 1 boinc boinc       522 Jul 26 21:01 boinc_task_state.xml
[2025-07-26 21:03:46] -rw-------. 1 boinc boinc       950 Jul 26 21:01 memory_monitor_summary.json
[2025-07-26 21:03:46] -rw-------. 1 boinc boinc     20679 Jul 26 21:01 log.45759799._000035.job.log.tgz.1
[2025-07-26 21:03:46] -rw-------. 1 boinc boinc      8388 Jul 26 21:03 heartbeat.json
[2025-07-26 21:03:46] -rw-r--r--. 1 boinc boinc      8192 Jul 26 21:03 boinc_mmap_file
[2025-07-26 21:03:46] -rw-r--r--. 1 boinc boinc        22 Jul 26 21:03 wrapper_checkpoint.txt
[2025-07-26 21:03:46] -rw-------. 1 boinc boinc        95 Jul 26 21:03 pilot_heartbeat.json
[2025-07-26 21:03:46] -rw-------. 1 boinc boinc       823 Jul 26 21:03 pilotlog.txt
[2025-07-26 21:03:46] -rw-------. 1 boinc boinc     74781 Jul 26 21:03 log.45759799._000035.job.log.1
[2025-07-26 21:03:46] -rw-------. 1 boinc boinc       188 Jul 26 21:03 output.list
[2025-07-26 21:03:46] -rw-r--r--. 1 boinc boinc       620 Jul 26 21:03 runtime_log
[2025-07-26 21:03:46] -rw-------. 1 boinc boinc    112640 Jul 26 21:03 result.tar.gz
[2025-07-26 21:03:46] -rw-r--r--. 1 boinc boinc      8648 Jul 26 21:03 runtime_log.err
[2025-07-26 21:03:46] -rw-------. 1 boinc boinc       644 Jul 26 21:03 qbqMDmrJ5z7n9Rq4apOajLDm4fhM0noT9bVof3QYDmej1KDmF5bNin.diag
[2025-07-26 21:03:46] -rw-r--r--. 1 boinc boinc     21821 Jul 26 21:03 stderr.txt
[2025-07-26 21:03:46] No HITS result produced
[2025-07-26 21:03:46]  *** Contents of shared directory: ***
[2025-07-26 21:03:46] total 231700
[2025-07-26 21:03:46] -rw-r--r--. 2 boinc boinc 236581898 Jul 26 21:00 ATLAS.root_0
[2025-07-26 21:03:46] -rw-r--r--. 2 boinc boinc     15095 Jul 26 21:00 start_atlas.sh
[2025-07-26 21:03:46] -rw-r--r--. 2 boinc boinc    542877 Jul 26 21:00 input.tar.gz
[2025-07-26 21:03:46] -rw-------. 1 boinc boinc    112640 Jul 26 21:03 result.tar.gz
21:03:48 (3580411): run_atlas exited; CPU time 21.112201
21:03:48 (3580411): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN