Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:56:28 (1479679): wrapper (7.7.26015): starting
23:56:28 (1479679): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 23:56:28] Arguments: --nthreads 8
[2025-07-26 23:56:28] Threads: 8
[2025-07-26 23:56:28] Checking for CVMFS
[2025-07-26 23:56:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 23:56:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 23:56:29] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 23:56:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 23:56:29] 2.12.6.0 83837 26755 311560 148799 1 788 30366043 32935936 18858 16776704 1 227434052 99.536 293579537 19479 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 23:56:29] CVMFS is ok
[2025-07-26 23:56:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 23:56:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 23:56:29] Further information can be found at the LHC@home message board.
[2025-07-26 23:56:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 23:56:29] Checking for apptainer binary...
[2025-07-26 23:56:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 23:56:29] Running /usr/bin/apptainer --version
[2025-07-26 23:56:29] apptainer version 1.4.1-1.el9
[2025-07-26 23:56:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 23:56:29] c7-2-10.aglt2.org
[2025-07-26 23:56:29] apptainer works
[2025-07-26 23:56:29] Set ATHENA_PROC_NUMBER=8
[2025-07-26 23:56:29] Set ATHENA_CORE_NUMBER=8
[2025-07-26 23:56:29] Starting ATLAS job with PandaID=6745835659
[2025-07-26 23:56:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 01:26:33]  *** The last 200 lines of the pilot log: ***
[2025-07-27 01:26:33]  is_tar=False
[2025-07-27 01:26:33]  lfn=log.45758324._000108.job.log.tgz.1
[2025-07-27 01:26:33]  mtime=0
[2025-07-27 01:26:33]  protocol_id=None
[2025-07-27 01:26:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 01:26:33]  replicas=None
[2025-07-27 01:26:33]  scope=mc23_13p6TeV
[2025-07-27 01:26:33]  status=None
[2025-07-27 01:26:33]  status_code=0
[2025-07-27 01:26:33]  storage_token=
[2025-07-27 01:26:33]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6745835659/log.45758324._000108.job.log.tgz.1
[2025-07-27 01:26:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/07/log.45758324._000108.job.log.tgz.1
[2025-07-27 01:26:33]  workdir=None
[2025-07-27 01:26:33] ]
[2025-07-27 01:26:33] 2025-07-27 05:25:50,542 | INFO     | transferring file log.45758324._000108.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6745835659/log.45758324._000108.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 01:26:33] 2025-07-27 05:25:50,542 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6745835659/log.45758324._000108.job.log.tgz.1 /tmp/boinchome/slots/1/log.45758324._000108.job
[2025-07-27 01:26:33] 2025-07-27 05:25:50,567 | INFO     | adding to output.list: log.45758324._000108.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/07/log.45758324._000108.job.log.tg
[2025-07-27 01:26:33] 2025-07-27 05:25:50,568 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 01:26:33] 2025-07-27 05:25:50,568 | INFO     | summary of transferred files:
[2025-07-27 01:26:33] 2025-07-27 05:25:50,568 | INFO     |  -- lfn=log.45758324._000108.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 01:26:33] 2025-07-27 05:25:50,568 | INFO     | stage-out finished correctly
[2025-07-27 01:26:33] 2025-07-27 05:25:51,222 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 01:26:33] 2025-07-27 05:25:53,484 | INFO     | job 6745835659 has state=finished
[2025-07-27 01:26:33] 2025-07-27 05:25:53,485 | INFO     | preparing for final server update for job 6745835659 in state='finished'
[2025-07-27 01:26:33] 2025-07-27 05:25:53,485 | INFO     | this job has now completed (state=finished)
[2025-07-27 01:26:33] 2025-07-27 05:25:53,485 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 01:26:33] 2025-07-27 05:25:53,485 | INFO     | log transfer has been attempted: DONE
[2025-07-27 01:26:33] 2025-07-27 05:25:53,485 | INFO     | job 6745835659 has finished - writing final server update
[2025-07-27 01:26:33] 2025-07-27 05:25:53,486 | INFO     | total number of processed events: 400 (read)
[2025-07-27 01:26:33] 2025-07-27 05:25:53,497 | INFO     | executing command: lscpu
[2025-07-27 01:26:33] 2025-07-27 05:25:53,577 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 01:26:33] 2025-07-27 05:25:55,129 | WARNING  | process 1515405 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 01:26:33] 2025-07-27 05:25:55,130 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745835659/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 01:26:33] 2025-07-27 05:25:55,629 | INFO     | number of running child processes to parent process 1515405: 1
[2025-07-27 01:26:33] 2025-07-27 05:25:55,629 | INFO     | maximum number of monitored processes: 6
[2025-07-27 01:26:33] 2025-07-27 05:25:58,131 | INFO     | monitor loop #378: job 0:6745835659 is in state 'finished'
[2025-07-27 01:26:33] 2025-07-27 05:25:58,131 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 01:26:33] 2025-07-27 05:25:59,657 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 01:26:33] 2025-07-27 05:25:59,683 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3124.2408645833334
[2025-07-27 01:26:33] 2025-07-27 05:25:59,709 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745835659/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 01:26:33] 2025-07-27 05:25:59,709 | INFO     | extracted standard info from prmon json
[2025-07-27 01:26:33] 2025-07-27 05:25:59,709 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 01:26:33] 2025-07-27 05:25:59,709 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 01:26:33] 2025-07-27 05:25:59,710 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 01:26:33] 2025-07-27 05:25:59,710 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 01:26:33] 2025-07-27 05:25:59,711 | INFO     | fitting pss+swap vs Time
[2025-07-27 01:26:33] 2025-07-27 05:25:59,712 | INFO     | sum of square deviations: 158737860.0
[2025-07-27 01:26:33] 2025-07-27 05:25:59,712 | INFO     | sum of deviations: -4024302370.0
[2025-07-27 01:26:33] 2025-07-27 05:25:59,712 | INFO     | mean x: 1753591359.5
[2025-07-27 01:26:33] 2025-07-27 05:25:59,712 | INFO     | mean y: 2239037.875
[2025-07-27 01:26:33] 2025-07-27 05:25:59,712 | INFO     | -- intersect: 44459067824.95435
[2025-07-27 01:26:33] 2025-07-27 05:25:59,712 | INFO     | intersect: 44459067824.95435
[2025-07-27 01:26:33] 2025-07-27 05:25:59,713 | INFO     | chi2: 0.03928027845344764
[2025-07-27 01:26:33] 2025-07-27 05:25:59,713 | INFO     | -- intersect: 44459067824.95435
[2025-07-27 01:26:33] 2025-07-27 05:25:59,713 | INFO     | current memory leak: -25.35 B/s (using 80 data points, chi2=0.04)
[2025-07-27 01:26:33] 2025-07-27 05:25:59,713 | INFO     | could have reported an average CPU frequency of 3130 MHz (6 samples)
[2025-07-27 01:26:33] 2025-07-27 05:25:59,713 | INFO     | ..............................
[2025-07-27 01:26:33] 2025-07-27 05:25:59,713 | INFO     | . Timing measurements:
[2025-07-27 01:26:33] 2025-07-27 05:25:59,713 | INFO     | . get job = 0 s
[2025-07-27 01:26:33] 2025-07-27 05:25:59,713 | INFO     | . initial setup = 2 s
[2025-07-27 01:26:33] 2025-07-27 05:25:59,713 | INFO     | . payload setup = 12 s
[2025-07-27 01:26:33] 2025-07-27 05:25:59,714 | INFO     | . stage-in = 0 s
[2025-07-27 01:26:33] 2025-07-27 05:25:59,714 | INFO     | . payload execution = 5307 s
[2025-07-27 01:26:33] 2025-07-27 05:25:59,714 | INFO     | . stage-out = 0 s
[2025-07-27 01:26:33] 2025-07-27 05:25:59,714 | INFO     | . log creation = 0 s
[2025-07-27 01:26:33] 2025-07-27 05:25:59,714 | INFO     | ..............................
[2025-07-27 01:26:33] 2025-07-27 05:26:00,017 | INFO     | 
[2025-07-27 01:26:33] 2025-07-27 05:26:00,018 | INFO     | job summary report
[2025-07-27 01:26:33] 2025-07-27 05:26:00,018 | INFO     | --------------------------------------------------
[2025-07-27 01:26:33] 2025-07-27 05:26:00,018 | INFO     | PanDA job id: 6745835659
[2025-07-27 01:26:33] 2025-07-27 05:26:00,018 | INFO     | task id: 45758324
[2025-07-27 01:26:33] 2025-07-27 05:26:00,018 | INFO     | errors: (none)
[2025-07-27 01:26:33] 2025-07-27 05:26:00,018 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 01:26:33] 2025-07-27 05:26:00,018 | INFO     | pilot state: finished 
[2025-07-27 01:26:33] 2025-07-27 05:26:00,018 | INFO     | transexitcode: 0
[2025-07-27 01:26:33] 2025-07-27 05:26:00,018 | INFO     | exeerrorcode: 0
[2025-07-27 01:26:33] 2025-07-27 05:26:00,018 | INFO     | exeerrordiag: 
[2025-07-27 01:26:33] 2025-07-27 05:26:00,018 | INFO     | exitcode: 0
[2025-07-27 01:26:33] 2025-07-27 05:26:00,018 | INFO     | exitmsg: OK
[2025-07-27 01:26:33] 2025-07-27 05:26:00,018 | INFO     | cpuconsumptiontime: 37173 s
[2025-07-27 01:26:33] 2025-07-27 05:26:00,018 | INFO     | nevents: 400
[2025-07-27 01:26:33] 2025-07-27 05:26:00,018 | INFO     | neventsw: 0
[2025-07-27 01:26:33] 2025-07-27 05:26:00,018 | INFO     | pid: 1515405
[2025-07-27 01:26:33] 2025-07-27 05:26:00,018 | INFO     | pgrp: 1515405
[2025-07-27 01:26:33] 2025-07-27 05:26:00,018 | INFO     | corecount: 8
[2025-07-27 01:26:33] 2025-07-27 05:26:00,019 | INFO     | event service: False
[2025-07-27 01:26:33] 2025-07-27 05:26:00,019 | INFO     | sizes: {0: 2397471, 6: 2397733, 11: 2397761, 5324: 2424188, 5327: 2433242, 5336: 2433380}
[2025-07-27 01:26:33] 2025-07-27 05:26:00,019 | INFO     | --------------------------------------------------
[2025-07-27 01:26:33] 2025-07-27 05:26:00,019 | INFO     | 
[2025-07-27 01:26:33] 2025-07-27 05:26:00,019 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-27 01:26:33] 2025-07-27 05:26:00,045 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 01:26:33] 2025-07-27 05:26:00,046 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 01:26:33] 2025-07-27 05:26:00,046 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 01:26:33] 2025-07-27 05:26:00,046 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 01:26:33] 2025-07-27 05:26:00,046 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 01:26:33] 2025-07-27 05:26:00,046 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 01:26:33] 2025-07-27 05:26:00,046 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 01:26:33] 2025-07-27 05:26:00,046 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 01:26:33] 2025-07-27 05:26:00,046 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 01:26:33] 2025-07-27 05:26:00,046 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 01:26:33] 2025-07-27 05:26:00,046 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 01:26:33] 2025-07-27 05:26:00,046 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 01:26:33] 2025-07-27 05:26:00,046 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 01:26:33] 2025-07-27 05:26:00,046 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 01:26:33] 2025-07-27 05:26:00,047 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 01:26:33] 2025-07-27 05:26:00,047 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 01:26:33] 2025-07-27 05:26:00,047 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 01:26:33] 2025-07-27 05:26:00,047 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 01:26:33] 2025-07-27 05:26:00,047 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 01:26:33] 2025-07-27 05:26:00,047 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 01:26:33] 2025-07-27 05:26:00,047 | INFO     | job 6745835659 has completed (purged errors)
[2025-07-27 01:26:33] 2025-07-27 05:26:00,047 | INFO     | overall cleanup function is called
[2025-07-27 01:26:33] 2025-07-27 05:26:01,055 | INFO     | --- collectZombieJob: --- 10, [1515405]
[2025-07-27 01:26:33] 2025-07-27 05:26:01,056 | INFO     | zombie collector waiting for pid 1515405
[2025-07-27 01:26:33] 2025-07-27 05:26:01,056 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 01:26:33] 2025-07-27 05:26:01,056 | INFO     | collected zombie processes
[2025-07-27 01:26:33] 2025-07-27 05:26:01,056 | INFO     | will attempt to kill all subprocesses of pid=1515405
[2025-07-27 01:26:33] 2025-07-27 05:26:01,541 | INFO     | process IDs to be killed: [1515405] (in reverse order)
[2025-07-27 01:26:33] 2025-07-27 05:26:01,765 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 01:26:33] 2025-07-27 05:26:01,766 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 01:26:33] 2025-07-27 05:26:01,792 | INFO     | did not find any defunct processes belonging to 1515405
[2025-07-27 01:26:33] 2025-07-27 05:26:01,834 | INFO     | did not find any defunct processes belonging to 1515405
[2025-07-27 01:26:33] 2025-07-27 05:26:01,835 | INFO     | ready for new job
[2025-07-27 01:26:33] 2025-07-27 05:26:01,835 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 01:26:33] 2025-07-27 05:26:01,837 | INFO     | ***************************************
[2025-07-27 01:26:33] 2025-07-27 05:26:01,837 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 01:26:33] 2025-07-27 05:26:01,838 | INFO     | ***************************************
[2025-07-27 01:26:33] 2025-07-27 05:26:01,838 | INFO     | 
[2025-07-27 01:26:33] 2025-07-27 05:26:01,856 | INFO     | architecture information:
[2025-07-27 01:26:33] 2025-07-27 05:26:01,859 | INFO     | executing command: cat /etc/os-release
[2025-07-27 01:26:33] 2025-07-27 05:26:01,880 | INFO     | cat /etc/os-release:
[2025-07-27 01:26:33] NAME="CentOS Linux"
[2025-07-27 01:26:33] VERSION="7 (Core)"
[2025-07-27 01:26:33] ID="centos"
[2025-07-27 01:26:33] ID_LIKE="rhel fedora"
[2025-07-27 01:26:33] VERSION_ID="7"
[2025-07-27 01:26:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 01:26:33] ANSI_COLOR="0;31"
[2025-07-27 01:26:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 01:26:33] HOME_URL="https://www.centos.org/"
[2025-07-27 01:26:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 01:26:33] 
[2025-07-27 01:26:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 01:26:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 01:26:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 01:26:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 01:26:33] 
[2025-07-27 01:26:33] 2025-07-27 05:26:01,880 | INFO     | ***************************************
[2025-07-27 01:26:33] 2025-07-27 05:26:02,384 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-27 01:26:33] 2025-07-27 05:26:02,411 | INFO     | sufficient remaining disk space (75788976128 B)
[2025-07-27 01:26:33] 2025-07-27 05:26:02,412 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 01:26:33] 2025-07-27 05:26:02,412 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 01:26:33] 2025-07-27 05:26:02,412 | INFO     | update_server=False
[2025-07-27 01:26:33] 2025-07-27 05:26:02,412 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 01:26:33] 2025-07-27 05:26:02,412 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 01:26:33] 2025-07-27 05:26:02,413 | INFO     | aborting loop
[2025-07-27 01:26:33] 2025-07-27 05:26:02,413 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 01:26:33] 2025-07-27 05:26:02,582 | INFO     | all data control threads have been joined
[2025-07-27 01:26:33] 2025-07-27 05:26:03,418 | INFO     | [job] retrieve thread has finished
[2025-07-27 01:26:33] 2025-07-27 05:26:03,420 | INFO     | [job] job monitor thread has finished
[2025-07-27 01:26:33] 2025-07-27 05:26:03,461 | INFO     | all payload control threads have been joined
[2025-07-27 01:26:33] 2025-07-27 05:26:03,482 | INFO     | all job control threads have been joined
[2025-07-27 01:26:33] 2025-07-27 05:26:03,587 | INFO     | [data] control thread has finished
[2025-07-27 01:26:33] 2025-07-27 05:26:03,589 | INFO     | [job] validate thread has finished
[2025-07-27 01:26:33] 2025-07-27 05:26:03,654 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 01:26:33] 2025-07-27 05:26:03,680 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 01:26:33] 2025-07-27 05:26:03,855 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 01:26:33] 2025-07-27 05:26:03,996 | INFO     | [payload] validate_post thread has finished
[2025-07-27 01:26:33] 2025-07-27 05:26:04,071 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 01:26:33] 2025-07-27 05:26:04,467 | INFO     | [payload] control thread has finished
[2025-07-27 01:26:33] 2025-07-27 05:26:04,488 | INFO     | [job] control thread has finished
[2025-07-27 01:26:33] 2025-07-27 05:26:04,692 | INFO     | [data] copytool_in thread has finished
[2025-07-27 01:26:33] 2025-07-27 05:26:04,752 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 01:26:33] 2025-07-27 05:26:04,809 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 01:26:33] 2025-07-27 05:26:04,960 | INFO     | [payload] failed_post thread has finished
[2025-07-27 01:26:33] 2025-07-27 05:26:05,687 | INFO     | [data] copytool_out thread has finished
[2025-07-27 01:26:33] 2025-07-27 05:26:05,815 | INFO     | [job] queue monitor thread has finished
[2025-07-27 01:26:33] 2025-07-27 05:26:06,419 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 01:26:33] 2025-07-27 05:26:07,159 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139749904574272)>', '<ExcThread(monitor, started 139749410977536)>']
[2025-07-27 01:26:33] 2025-07-27 05:26:12,186 | INFO     | all workflow threads have been joined
[2025-07-27 01:26:33] 2025-07-27 05:26:12,188 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 01:26:33] 2025-07-27 05:26:12,188 | INFO     | traces error code: 0
[2025-07-27 01:26:33] 2025-07-27 05:26:12,189 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 01:26:33] 2025-07-27 05:26:32,582 | INFO     | PID=1487149 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 01:26:33] 2025-07-27 05:26:32,582 | INFO     | .. there are 25 such processes running
[2025-07-27 01:26:33] 2025-07-27 05:26:32,583 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 01:26:33] 2025-07-27 05:26:32,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 01:26:33] 2025-07-27 05:26:32,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 01:26:33] 2025-07-27 05:26:32,584 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 01:26:33] 2025-07-27 05:26:32,584 | INFO     | [monitor] control thread has ended
[2025-07-27 01:26:33] 2025-07-27 05:26:32,852 [wrapper] ==== pilot stdout END ====
[2025-07-27 01:26:33] 2025-07-27 05:26:32,857 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 01:26:33] 2025-07-27 05:26:32,860 [wrapper] pilotpid: 1487149
[2025-07-27 01:26:33] 2025-07-27 05:26:32,865 [wrapper] Pilot exit status: 0
[2025-07-27 01:26:33] 2025-07-27 05:26:32,882 [wrapper] pandaids: 6745835659
[2025-07-27 01:26:33] 2025-07-27 05:26:33,070 [wrapper] cleanup supervisor_pilot 3585609 1487150
[2025-07-27 01:26:33] 2025-07-27 05:26:33,077 [wrapper] Test setup, not cleaning
[2025-07-27 01:26:33] 2025-07-27 05:26:33,082 [wrapper] apfmon messages muted
[2025-07-27 01:26:33] 2025-07-27 05:26:33,087 [wrapper] ==== wrapper stdout END ====
[2025-07-27 01:26:33] 2025-07-27 05:26:33,094 [wrapper] ==== wrapper stderr END ====
[2025-07-27 01:26:33]  *** Error codes and diagnostics ***
[2025-07-27 01:26:33]     "exeErrorCode": 0,
[2025-07-27 01:26:33]     "exeErrorDiag": "",
[2025-07-27 01:26:33]     "pilotErrorCode": 0,
[2025-07-27 01:26:33]     "pilotErrorDiag": "",
[2025-07-27 01:26:33]  *** Listing of results directory ***
[2025-07-27 01:26:33] total 413300
[2025-07-27 01:26:33] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 18:38 pilot3.tar.gz
[2025-07-27 01:26:33] -rwx------. 1 boincer umatlas     36292 Jul 26 18:44 runpilot2-wrapper.sh
[2025-07-27 01:26:33] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 18:44 queuedata.json
[2025-07-27 01:26:33] -rw-r--r--. 1 boincer umatlas       100 Jul 26 23:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 01:26:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 23:56 run_atlas
[2025-07-27 01:26:33] -rw-r--r--. 1 boincer umatlas       105 Jul 26 23:56 job.xml
[2025-07-27 01:26:33] -rw-r--r--. 2 boincer umatlas 242150015 Jul 26 23:56 EVNT.45758322._000005.pool.root.1
[2025-07-27 01:26:33] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 23:56 start_atlas.sh
[2025-07-27 01:26:33] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 23:56 shared
[2025-07-27 01:26:33] -rw-r--r--. 2 boincer umatlas    542876 Jul 26 23:56 input.tar.gz
[2025-07-27 01:26:33] -rw-r--r--. 1 boincer umatlas         0 Jul 26 23:56 boinc_lockfile
[2025-07-27 01:26:33] -rw-r--r--. 1 boincer umatlas      2562 Jul 26 23:56 pandaJob.out
[2025-07-27 01:26:33] -rw-------. 1 boincer umatlas    980125 Jul 26 23:56 agis_schedconf.cvmfs.json
[2025-07-27 01:26:33] -rw-------. 1 boincer umatlas   1593052 Jul 26 23:56 agis_ddmendpoints.agis.ALL.json
[2025-07-27 01:26:33] drwx------. 4 boincer umatlas      4096 Jul 26 23:56 pilot3
[2025-07-27 01:26:33] -rw-r--r--. 1 boincer umatlas      6931 Jul 27 01:18 init_data.xml
[2025-07-27 01:26:33] -rw-------. 1 boincer umatlas 175552853 Jul 27 01:25 HITS.45758324._000108.pool.root.1
[2025-07-27 01:26:33] -rw-r--r--. 1 boincer umatlas       529 Jul 27 01:25 boinc_task_state.xml
[2025-07-27 01:26:33] -rw-------. 1 boincer umatlas      1045 Jul 27 01:25 memory_monitor_summary.json
[2025-07-27 01:26:33] -rw-------. 1 boincer umatlas    306000 Jul 27 01:25 log.45758324._000108.job.log.tgz.1
[2025-07-27 01:26:33] -rw-------. 1 boincer umatlas      7763 Jul 27 01:25 heartbeat.json
[2025-07-27 01:26:33] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 01:26 boinc_mmap_file
[2025-07-27 01:26:33] -rw-r--r--. 1 boincer umatlas        27 Jul 27 01:26 wrapper_checkpoint.txt
[2025-07-27 01:26:33] -rw-------. 1 boincer umatlas       823 Jul 27 01:26 pilotlog.txt
[2025-07-27 01:26:33] -rw-------. 1 boincer umatlas        95 Jul 27 01:26 pilot_heartbeat.json
[2025-07-27 01:26:33] -rw-------. 1 boincer umatlas    512096 Jul 27 01:26 log.45758324._000108.job.log.1
[2025-07-27 01:26:33] -rw-------. 1 boincer umatlas       357 Jul 27 01:26 output.list
[2025-07-27 01:26:33] -rw-r--r--. 1 boincer umatlas       620 Jul 27 01:26 runtime_log
[2025-07-27 01:26:33] -rw-------. 1 boincer umatlas    839680 Jul 27 01:26 result.tar.gz
[2025-07-27 01:26:33] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 01:26 runtime_log.err
[2025-07-27 01:26:33] -rw-------. 1 boincer umatlas       652 Jul 27 01:26 HM3MDmqn2z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyNTLDmZl1plm.diag
[2025-07-27 01:26:33] -rw-r--r--. 1 boincer umatlas     21581 Jul 27 01:26 stderr.txt
[2025-07-27 01:26:33] HITS file was successfully produced:
[2025-07-27 01:26:33] -rw-------. 1 boincer umatlas 175552853 Jul 27 01:25 shared/HITS.pool.root.1
[2025-07-27 01:26:33]  *** Contents of shared directory: ***
[2025-07-27 01:26:33] total 409292
[2025-07-27 01:26:33] -rw-r--r--. 2 boincer umatlas 242150015 Jul 26 23:56 ATLAS.root_0
[2025-07-27 01:26:33] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 23:56 start_atlas.sh
[2025-07-27 01:26:33] -rw-r--r--. 2 boincer umatlas    542876 Jul 26 23:56 input.tar.gz
[2025-07-27 01:26:33] -rw-------. 1 boincer umatlas 175552853 Jul 27 01:25 HITS.pool.root.1
[2025-07-27 01:26:33] -rw-------. 1 boincer umatlas    839680 Jul 27 01:26 result.tar.gz
01:26:34 (1479679): run_atlas exited; CPU time 37424.379715
01:26:34 (1479679): called boinc_finish(0)

</stderr_txt>
]]>

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