Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:46:49 (2631683): wrapper (7.7.26015): starting
23:46:49 (2631683): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 23:46:49] Arguments: --nthreads 8
[2025-07-26 23:46:49] Threads: 8
[2025-07-26 23:46:49] Checking for CVMFS
[2025-07-26 23:46:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 23:46:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 23:46:50] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 23:46:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 23:46:50] 2.13.0.0 1923533 19143 304908 148799 0 367 21361524 32935937 15557 16776704 0 89806994 99.552 142652408 19368 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 23:46:50] CVMFS is ok
[2025-07-26 23:46:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 23:46:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 23:46:50] Further information can be found at the LHC@home message board.
[2025-07-26 23:46:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 23:46:50] Checking for apptainer binary...
[2025-07-26 23:46:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 23:46:50] Running /usr/bin/apptainer --version
[2025-07-26 23:46:50] apptainer version 1.4.1-1.el9
[2025-07-26 23:46:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 23:46:50] c7-3-17.aglt2.org
[2025-07-26 23:46:50] apptainer works
[2025-07-26 23:46:50] Set ATHENA_PROC_NUMBER=8
[2025-07-26 23:46:50] Set ATHENA_CORE_NUMBER=8
[2025-07-26 23:46:50] Starting ATLAS job with PandaID=6745835210
[2025-07-26 23:46:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 01:39:25]  *** The last 200 lines of the pilot log: ***
[2025-07-27 01:39:25] 2025-07-27 05:38:53,096 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 01:39:25] 2025-07-27 05:38:53,096 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 01:39:25] 2025-07-27 05:38:53,099 | INFO     | fitting pss+swap vs Time
[2025-07-27 01:39:25] 2025-07-27 05:38:53,100 | INFO     | sufficient remaining disk space (75559337984 B)
[2025-07-27 01:39:25] 2025-07-27 05:38:53,101 | INFO     | sum of square deviations: 401533110.0
[2025-07-27 01:39:25] 2025-07-27 05:38:53,101 | INFO     | sum of deviations: 9329908764.0
[2025-07-27 01:39:25] 2025-07-27 05:38:53,102 | INFO     | mean x: 1753591364.0
[2025-07-27 01:39:25] 2025-07-27 05:38:53,102 | INFO     | mean y: 2152515.8073394494
[2025-07-27 01:39:25] 2025-07-27 05:38:53,102 | INFO     | -- intersect: -40743796019.93935
[2025-07-27 01:39:25] 2025-07-27 05:38:53,102 | INFO     | intersect: -40743796019.93935
[2025-07-27 01:39:25] 2025-07-27 05:38:53,102 | INFO     | chi2: 1.5798161077219393
[2025-07-27 01:39:25] 2025-07-27 05:38:53,102 | INFO     | sum of square deviations: 348769330.0
[2025-07-27 01:39:25] 2025-07-27 05:38:53,102 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-27 01:39:25] 2025-07-27 05:38:53,103 | INFO     | sum of deviations: 9261217457.000002
[2025-07-27 01:39:25] 2025-07-27 05:38:53,104 | INFO     | mean x: 1753591211.5
[2025-07-27 01:39:25] 2025-07-27 05:38:53,104 | INFO     | mean y: 2152256.8076923075
[2025-07-27 01:39:25] 2025-07-27 05:38:53,104 | INFO     | -- intersect: -46562692021.17278
[2025-07-27 01:39:25] 2025-07-27 05:38:53,104 | INFO     | intersect: -46562692021.17278
[2025-07-27 01:39:25] 2025-07-27 05:38:53,105 | INFO     | chi2: 1.5804487402408949
[2025-07-27 01:39:25] 2025-07-27 05:38:53,105 | INFO     | current chi2=1.5804487402408949 (change=-0.040044693547774055 %)
[2025-07-27 01:39:25] 2025-07-27 05:38:53,105 | INFO     | right removable region: 103
[2025-07-27 01:39:25] 2025-07-27 05:38:53,105 | INFO     | sum of square deviations: 348769330.0
[2025-07-27 01:39:25] 2025-07-27 05:38:53,106 | INFO     | sum of deviations: -5522044428.500001
[2025-07-27 01:39:25] 2025-07-27 05:38:53,106 | INFO     | mean x: 1753591516.5
[2025-07-27 01:39:25] 2025-07-27 05:38:53,106 | INFO     | mean y: 2194638.7596153845
[2025-07-27 01:39:25] 2025-07-27 05:38:53,106 | INFO     | -- intersect: 27766706683.30692
[2025-07-27 01:39:25] 2025-07-27 05:38:53,106 | INFO     | intersect: 27766706683.30692
[2025-07-27 01:39:25] 2025-07-27 05:38:53,106 | INFO     | chi2: 0.087128284188767
[2025-07-27 01:39:25] 2025-07-27 05:38:53,106 | INFO     | current chi2=0.087128284188767 (change=94.48490974595745 %)
[2025-07-27 01:39:25] 2025-07-27 05:38:53,106 | INFO     | sum of square deviations: 300842850.0
[2025-07-27 01:39:25] 2025-07-27 05:38:53,107 | INFO     | sum of deviations: -4119167191.000001
[2025-07-27 01:39:25] 2025-07-27 05:38:53,107 | INFO     | mean x: 1753591669.0
[2025-07-27 01:39:25] 2025-07-27 05:38:53,107 | INFO     | mean y: 2190132.737373737
[2025-07-27 01:39:25] 2025-07-27 05:38:53,107 | INFO     | -- intersect: 24012523997.596497
[2025-07-27 01:39:25] 2025-07-27 05:38:53,107 | INFO     | intersect: 24012523997.596497
[2025-07-27 01:39:25] 2025-07-27 05:38:53,107 | INFO     | chi2: 0.08311362161469742
[2025-07-27 01:39:25] 2025-07-27 05:38:53,107 | INFO     | current chi2=0.08311362161469742 (change=4.607760397727625 %)
[2025-07-27 01:39:25] 2025-07-27 05:38:53,107 | INFO     | left removable region: 20
[2025-07-27 01:39:25] 2025-07-27 05:38:53,108 | INFO     | sum of square deviations: 177275882.0
[2025-07-27 01:39:25] 2025-07-27 05:38:53,108 | INFO     | sum of deviations: -351672502.9999998
[2025-07-27 01:39:25] 2025-07-27 05:38:53,108 | INFO     | mean x: 1753591791.0
[2025-07-27 01:39:25] 2025-07-27 05:38:53,108 | INFO     | mean y: 2177485.6506024096
[2025-07-27 01:39:25] 2025-07-27 05:38:53,108 | INFO     | -- intersect: 3480879762.7106175
[2025-07-27 01:39:25] 2025-07-27 05:38:53,108 | INFO     | intersect: 3480879762.7106175
[2025-07-27 01:39:25] 2025-07-27 05:38:53,108 | INFO     | chi2: 0.057115295992645004
[2025-07-27 01:39:25] 2025-07-27 05:38:53,109 | INFO     | -- intersect: 3480879762.7106175
[2025-07-27 01:39:25] 2025-07-27 05:38:53,109 | INFO     | current memory leak: -1.98 B/s (using 83 data points, chi2=0.06)
[2025-07-27 01:39:25] 2025-07-27 05:38:53,109 | INFO     | could have reported an average CPU frequency of 2988 MHz (7 samples)
[2025-07-27 01:39:25] 2025-07-27 05:38:53,110 | INFO     | ..............................
[2025-07-27 01:39:25] 2025-07-27 05:38:53,110 | INFO     | . Timing measurements:
[2025-07-27 01:39:25] 2025-07-27 05:38:53,110 | INFO     | . get job = 0 s
[2025-07-27 01:39:25] 2025-07-27 05:38:53,110 | INFO     | . initial setup = 3 s
[2025-07-27 01:39:25] 2025-07-27 05:38:53,110 | INFO     | . payload setup = 12 s
[2025-07-27 01:39:25] 2025-07-27 05:38:53,110 | INFO     | . stage-in = 0 s
[2025-07-27 01:39:25] 2025-07-27 05:38:53,110 | INFO     | . payload execution = 6654 s
[2025-07-27 01:39:25] 2025-07-27 05:38:53,110 | INFO     | . stage-out = 1 s
[2025-07-27 01:39:25] 2025-07-27 05:38:53,110 | INFO     | . log creation = 0 s
[2025-07-27 01:39:25] 2025-07-27 05:38:53,110 | INFO     | ..............................
[2025-07-27 01:39:25] 2025-07-27 05:38:53,113 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6745835210: 3169844 B (within 2537553920 B limit)
[2025-07-27 01:39:25] 2025-07-27 05:38:53,115 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6745835210/HITS.45743349._045418.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-27 01:39:25] 2025-07-27 05:38:53,121 | INFO     | total size of present files: 0 B (workdir size: 3169844 B)
[2025-07-27 01:39:25] 2025-07-27 05:38:53,138 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6745835210/HITS.45743349._045418.pool.root.1 since it does not exist
[2025-07-27 01:39:25] 2025-07-27 05:38:53,241 | INFO     | 
[2025-07-27 01:39:25] 2025-07-27 05:38:53,241 | INFO     | job summary report
[2025-07-27 01:39:25] 2025-07-27 05:38:53,241 | INFO     | --------------------------------------------------
[2025-07-27 01:39:25] 2025-07-27 05:38:53,241 | INFO     | PanDA job id: 6745835210
[2025-07-27 01:39:25] 2025-07-27 05:38:53,241 | INFO     | task id: 45743349
[2025-07-27 01:39:25] 2025-07-27 05:38:53,241 | INFO     | errors: (none)
[2025-07-27 01:39:25] 2025-07-27 05:38:53,242 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 01:39:25] 2025-07-27 05:38:53,242 | INFO     | pilot state: finished 
[2025-07-27 01:39:25] 2025-07-27 05:38:53,242 | INFO     | transexitcode: 0
[2025-07-27 01:39:25] 2025-07-27 05:38:53,242 | INFO     | exeerrorcode: 0
[2025-07-27 01:39:25] 2025-07-27 05:38:53,242 | INFO     | exeerrordiag: 
[2025-07-27 01:39:25] 2025-07-27 05:38:53,242 | INFO     | exitcode: 0
[2025-07-27 01:39:25] 2025-07-27 05:38:53,242 | INFO     | exitmsg: OK
[2025-07-27 01:39:25] 2025-07-27 05:38:53,242 | INFO     | cpuconsumptiontime: 40498 s
[2025-07-27 01:39:25] 2025-07-27 05:38:53,242 | INFO     | nevents: 400
[2025-07-27 01:39:25] 2025-07-27 05:38:53,242 | INFO     | neventsw: 0
[2025-07-27 01:39:25] 2025-07-27 05:38:53,242 | INFO     | pid: 2644081
[2025-07-27 01:39:25] 2025-07-27 05:38:53,242 | INFO     | pgrp: 2644081
[2025-07-27 01:39:25] 2025-07-27 05:38:53,242 | INFO     | corecount: 8
[2025-07-27 01:39:25] 2025-07-27 05:38:53,242 | INFO     | event service: False
[2025-07-27 01:39:25] 2025-07-27 05:38:53,243 | INFO     | sizes: {0: 2397473, 8: 2397735, 11: 2397763, 6671: 2424738, 6672: 2433792, 6684: 2433958}
[2025-07-27 01:39:25] 2025-07-27 05:38:53,243 | INFO     | --------------------------------------------------
[2025-07-27 01:39:25] 2025-07-27 05:38:53,243 | INFO     | 
[2025-07-27 01:39:25] 2025-07-27 05:38:53,243 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 01:39:25] 2025-07-27 05:38:53,316 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 01:39:25] 2025-07-27 05:38:53,316 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 01:39:25] 2025-07-27 05:38:53,316 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 01:39:25] 2025-07-27 05:38:53,316 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 01:39:25] 2025-07-27 05:38:53,316 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 01:39:25] 2025-07-27 05:38:53,316 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 01:39:25] 2025-07-27 05:38:53,316 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 01:39:25] 2025-07-27 05:38:53,316 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 01:39:25] 2025-07-27 05:38:53,317 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 01:39:25] 2025-07-27 05:38:53,317 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 01:39:25] 2025-07-27 05:38:53,317 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 01:39:25] 2025-07-27 05:38:53,317 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 01:39:25] 2025-07-27 05:38:53,317 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 01:39:25] 2025-07-27 05:38:53,317 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 01:39:25] 2025-07-27 05:38:53,317 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 01:39:25] 2025-07-27 05:38:53,317 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 01:39:25] 2025-07-27 05:38:53,317 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 01:39:25] 2025-07-27 05:38:53,317 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 01:39:25] 2025-07-27 05:38:53,317 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 01:39:25] 2025-07-27 05:38:53,317 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 01:39:25] 2025-07-27 05:38:53,318 | INFO     | job 6745835210 has completed (purged errors)
[2025-07-27 01:39:25] 2025-07-27 05:38:53,318 | INFO     | overall cleanup function is called
[2025-07-27 01:39:25] 2025-07-27 05:38:53,685 | INFO     | number of running child processes to parent process 2644081: 1
[2025-07-27 01:39:25] 2025-07-27 05:38:53,686 | INFO     | maximum number of monitored processes: 6
[2025-07-27 01:39:25] 2025-07-27 05:38:53,686 | INFO     | aborting job monitoring since job object (job id=6745835210) has expired
[2025-07-27 01:39:25] 2025-07-27 05:38:54,330 | INFO     | --- collectZombieJob: --- 10, [2644081]
[2025-07-27 01:39:25] 2025-07-27 05:38:54,330 | INFO     | zombie collector waiting for pid 2644081
[2025-07-27 01:39:25] 2025-07-27 05:38:54,331 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 01:39:25] 2025-07-27 05:38:54,331 | INFO     | collected zombie processes
[2025-07-27 01:39:25] 2025-07-27 05:38:54,331 | INFO     | will attempt to kill all subprocesses of pid=2644081
[2025-07-27 01:39:25] 2025-07-27 05:38:54,883 | INFO     | process IDs to be killed: [2644081] (in reverse order)
[2025-07-27 01:39:25] 2025-07-27 05:38:55,042 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 01:39:25] 2025-07-27 05:38:55,042 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 01:39:25] 2025-07-27 05:38:55,061 | INFO     | did not find any defunct processes belonging to 2644081
[2025-07-27 01:39:25] 2025-07-27 05:38:55,081 | INFO     | did not find any defunct processes belonging to 2644081
[2025-07-27 01:39:25] 2025-07-27 05:38:55,081 | INFO     | ready for new job
[2025-07-27 01:39:25] 2025-07-27 05:38:55,081 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 01:39:25] 2025-07-27 05:38:55,083 | INFO     | ***************************************
[2025-07-27 01:39:25] 2025-07-27 05:38:55,083 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 01:39:25] 2025-07-27 05:38:55,083 | INFO     | ***************************************
[2025-07-27 01:39:25] 2025-07-27 05:38:55,083 | INFO     | 
[2025-07-27 01:39:25] 2025-07-27 05:38:55,104 | INFO     | architecture information:
[2025-07-27 01:39:25] 2025-07-27 05:38:55,105 | INFO     | executing command: cat /etc/os-release
[2025-07-27 01:39:25] 2025-07-27 05:38:55,139 | INFO     | cat /etc/os-release:
[2025-07-27 01:39:25] NAME="CentOS Linux"
[2025-07-27 01:39:25] VERSION="7 (Core)"
[2025-07-27 01:39:25] ID="centos"
[2025-07-27 01:39:25] ID_LIKE="rhel fedora"
[2025-07-27 01:39:25] VERSION_ID="7"
[2025-07-27 01:39:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 01:39:25] ANSI_COLOR="0;31"
[2025-07-27 01:39:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 01:39:25] HOME_URL="https://www.centos.org/"
[2025-07-27 01:39:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 01:39:25] 
[2025-07-27 01:39:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 01:39:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 01:39:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 01:39:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 01:39:25] 
[2025-07-27 01:39:25] 2025-07-27 05:38:55,140 | INFO     | ***************************************
[2025-07-27 01:39:25] 2025-07-27 05:38:55,647 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 01:39:25] 2025-07-27 05:38:55,681 | INFO     | sufficient remaining disk space (75563532288 B)
[2025-07-27 01:39:25] 2025-07-27 05:38:55,682 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 01:39:25] 2025-07-27 05:38:55,682 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 01:39:25] 2025-07-27 05:38:55,682 | INFO     | update_server=False
[2025-07-27 01:39:25] 2025-07-27 05:38:55,682 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 01:39:25] 2025-07-27 05:38:55,683 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 01:39:25] 2025-07-27 05:38:55,683 | INFO     | aborting loop
[2025-07-27 01:39:25] 2025-07-27 05:38:55,886 | INFO     | all data control threads have been joined
[2025-07-27 01:39:25] 2025-07-27 05:38:56,201 | INFO     | all job control threads have been joined
[2025-07-27 01:39:25] 2025-07-27 05:38:56,402 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 01:39:25] 2025-07-27 05:38:56,431 | INFO     | all payload control threads have been joined
[2025-07-27 01:39:25] 2025-07-27 05:38:56,688 | INFO     | [job] retrieve thread has finished
[2025-07-27 01:39:25] 2025-07-27 05:38:56,689 | INFO     | [job] job monitor thread has finished
[2025-07-27 01:39:25] 2025-07-27 05:38:56,713 | INFO     | [data] copytool_in thread has finished
[2025-07-27 01:39:25] 2025-07-27 05:38:56,833 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 01:39:25] 2025-07-27 05:38:56,892 | INFO     | [data] control thread has finished
[2025-07-27 01:39:25] 2025-07-27 05:38:57,206 | INFO     | [job] control thread has finished
[2025-07-27 01:39:25] 2025-07-27 05:38:57,229 | INFO     | [payload] validate_post thread has finished
[2025-07-27 01:39:25] 2025-07-27 05:38:57,248 | INFO     | [payload] failed_post thread has finished
[2025-07-27 01:39:25] 2025-07-27 05:38:57,436 | INFO     | [payload] control thread has finished
[2025-07-27 01:39:25] 2025-07-27 05:38:57,573 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 01:39:25] 2025-07-27 05:38:57,714 | INFO     | [job] validate thread has finished
[2025-07-27 01:39:25] 2025-07-27 05:38:58,043 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 01:39:25] 2025-07-27 05:38:58,063 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 01:39:25] 2025-07-27 05:38:58,221 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 01:39:25] 2025-07-27 05:38:58,840 | INFO     | [data] copytool_out thread has finished
[2025-07-27 01:39:25] 2025-07-27 05:38:59,229 | INFO     | [job] queue monitor thread has finished
[2025-07-27 01:39:25] 2025-07-27 05:39:00,409 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 01:39:25] 2025-07-27 05:39:06,117 | INFO     | job.realtimelogging is not enabled
[2025-07-27 01:39:25] 2025-07-27 05:39:07,123 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 01:39:25] 2025-07-27 05:39:07,393 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139734037059392)>', '<ExcThread(monitor, started 139733397137152)>']
[2025-07-27 01:39:25] 2025-07-27 05:39:12,419 | INFO     | all workflow threads have been joined
[2025-07-27 01:39:25] 2025-07-27 05:39:12,419 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 01:39:25] 2025-07-27 05:39:12,420 | INFO     | traces error code: 0
[2025-07-27 01:39:25] 2025-07-27 05:39:12,421 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 01:39:25] 2025-07-27 05:39:25,149 | INFO     | PID=2635931 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 01:39:25] 2025-07-27 05:39:25,149 | INFO     | .. there are 18 such processes running
[2025-07-27 01:39:25] 2025-07-27 05:39:25,150 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 01:39:25] 2025-07-27 05:39:25,150 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 01:39:25] 2025-07-27 05:39:25,151 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 01:39:25] 2025-07-27 05:39:25,151 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 01:39:25] 2025-07-27 05:39:25,151 | INFO     | [monitor] control thread has ended
[2025-07-27 01:39:25] 2025-07-27 05:39:25,367 [wrapper] ==== pilot stdout END ====
[2025-07-27 01:39:25] 2025-07-27 05:39:25,373 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 01:39:25] 2025-07-27 05:39:25,381 [wrapper] pilotpid: 2635931
[2025-07-27 01:39:25] 2025-07-27 05:39:25,391 [wrapper] Pilot exit status: 0
[2025-07-27 01:39:25] 2025-07-27 05:39:25,419 [wrapper] pandaids: 6745835210
[2025-07-27 01:39:25] 2025-07-27 05:39:25,544 [wrapper] cleanup supervisor_pilot 3157922 2635932
[2025-07-27 01:39:25] 2025-07-27 05:39:25,549 [wrapper] Test setup, not cleaning
[2025-07-27 01:39:25] 2025-07-27 05:39:25,561 [wrapper] apfmon messages muted
[2025-07-27 01:39:25] 2025-07-27 05:39:25,566 [wrapper] ==== wrapper stdout END ====
[2025-07-27 01:39:25] 2025-07-27 05:39:25,570 [wrapper] ==== wrapper stderr END ====
[2025-07-27 01:39:25]  *** Error codes and diagnostics ***
[2025-07-27 01:39:25]     "exeErrorCode": 0,
[2025-07-27 01:39:25]     "exeErrorDiag": "",
[2025-07-27 01:39:25]     "pilotErrorCode": 0,
[2025-07-27 01:39:25]     "pilotErrorDiag": "",
[2025-07-27 01:39:25]  *** Listing of results directory ***
[2025-07-27 01:39:25] total 353908
[2025-07-27 01:39:25] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 18:18 pilot3.tar.gz
[2025-07-27 01:39:25] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 18:30 queuedata.json
[2025-07-27 01:39:25] -rwx------. 1 boincer umatlas     36292 Jul 26 18:31 runpilot2-wrapper.sh
[2025-07-27 01:39:25] -rw-r--r--. 1 boincer umatlas       100 Jul 26 23:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 01:39:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 23:46 run_atlas
[2025-07-27 01:39:25] -rw-r--r--. 1 boincer umatlas       105 Jul 26 23:46 job.xml
[2025-07-27 01:39:25] -rw-r--r--. 2 boincer umatlas 147358165 Jul 26 23:46 EVNT.45743347._002536.pool.root.1
[2025-07-27 01:39:25] -rw-r--r--. 2 boincer umatlas    542888 Jul 26 23:46 input.tar.gz
[2025-07-27 01:39:25] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 23:46 start_atlas.sh
[2025-07-27 01:39:25] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 23:46 shared
[2025-07-27 01:39:25] -rw-r--r--. 1 boincer umatlas         0 Jul 26 23:46 boinc_lockfile
[2025-07-27 01:39:25] -rw-r--r--. 1 boincer umatlas      2562 Jul 26 23:46 pandaJob.out
[2025-07-27 01:39:25] -rw-------. 1 boincer umatlas    980125 Jul 26 23:47 agis_schedconf.cvmfs.json
[2025-07-27 01:39:25] -rw-------. 1 boincer umatlas   1593052 Jul 26 23:47 agis_ddmendpoints.agis.ALL.json
[2025-07-27 01:39:25] drwx------. 4 boincer umatlas      4096 Jul 26 23:47 pilot3
[2025-07-27 01:39:25] -rw-r--r--. 1 boincer umatlas      6931 Jul 27 01:27 init_data.xml
[2025-07-27 01:39:25] -rw-------. 1 boincer umatlas 209283536 Jul 27 01:38 HITS.45743349._045418.pool.root.1
[2025-07-27 01:39:25] -rw-r--r--. 1 boincer umatlas       529 Jul 27 01:38 boinc_task_state.xml
[2025-07-27 01:39:25] -rw-------. 1 boincer umatlas      1030 Jul 27 01:38 memory_monitor_summary.json
[2025-07-27 01:39:25] -rw-------. 1 boincer umatlas    310795 Jul 27 01:38 log.45743349._045418.job.log.tgz.1
[2025-07-27 01:39:25] -rw-------. 1 boincer umatlas      7767 Jul 27 01:38 heartbeat.json
[2025-07-27 01:39:25] -rw-r--r--. 1 boincer umatlas      8192 Jul 27 01:39 boinc_mmap_file
[2025-07-27 01:39:25] -rw-r--r--. 1 boincer umatlas        27 Jul 27 01:39 wrapper_checkpoint.txt
[2025-07-27 01:39:25] -rw-------. 1 boincer umatlas        95 Jul 27 01:39 pilot_heartbeat.json
[2025-07-27 01:39:25] -rw-------. 1 boincer umatlas       823 Jul 27 01:39 pilotlog.txt
[2025-07-27 01:39:25] -rw-------. 1 boincer umatlas    632412 Jul 27 01:39 log.45743349._045418.job.log.1
[2025-07-27 01:39:25] -rw-------. 1 boincer umatlas       357 Jul 27 01:39 output.list
[2025-07-27 01:39:25] -rw-r--r--. 1 boincer umatlas       620 Jul 27 01:39 runtime_log
[2025-07-27 01:39:25] -rw-------. 1 boincer umatlas    962560 Jul 27 01:39 result.tar.gz
[2025-07-27 01:39:25] -rw-r--r--. 1 boincer umatlas      8655 Jul 27 01:39 runtime_log.err
[2025-07-27 01:39:25] -rw-------. 1 boincer umatlas       654 Jul 27 01:39 3ZZMDmob2z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJLTLDm7wQxhm.diag
[2025-07-27 01:39:25] -rw-r--r--. 1 boincer umatlas     21336 Jul 27 01:39 stderr.txt
[2025-07-27 01:39:25] HITS file was successfully produced:
[2025-07-27 01:39:25] -rw-------. 1 boincer umatlas 209283536 Jul 27 01:38 shared/HITS.pool.root.1
[2025-07-27 01:39:25]  *** Contents of shared directory: ***
[2025-07-27 01:39:25] total 349780
[2025-07-27 01:39:25] -rw-r--r--. 2 boincer umatlas 147358165 Jul 26 23:46 ATLAS.root_0
[2025-07-27 01:39:25] -rw-r--r--. 2 boincer umatlas    542888 Jul 26 23:46 input.tar.gz
[2025-07-27 01:39:25] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 23:46 start_atlas.sh
[2025-07-27 01:39:25] -rw-------. 1 boincer umatlas 209283536 Jul 27 01:38 HITS.pool.root.1
[2025-07-27 01:39:25] -rw-------. 1 boincer umatlas    962560 Jul 27 01:39 result.tar.gz
01:39:27 (2631683): run_atlas exited; CPU time 40684.539046
01:39:27 (2631683): called boinc_finish(0)

</stderr_txt>
]]>

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