Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:46:18 (1704629): wrapper (7.7.26015): starting
17:46:18 (1704629): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 17:46:18] Arguments: --nthreads 4
[2025-07-27 17:46:18] Threads: 4
[2025-07-27 17:46:18] Checking for CVMFS
[2025-07-27 17:46:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 17:46:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 17:46:18] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 17:46:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 17:46:18] 2.9.2.0 243636 4183 94620 148817 2 57 35088149 36864000 0 130560 0 3875964 99.992 151685 1633 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-27 17:46:18] CVMFS is ok
[2025-07-27 17:46:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 17:46:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 17:46:18] Further information can be found at the LHC@home message board.
[2025-07-27 17:46:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 17:46:18] Checking for apptainer binary...
[2025-07-27 17:46:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 17:46:18] Running /usr/bin/apptainer --version
[2025-07-27 17:46:18] apptainer version 1.4.1-1.1
[2025-07-27 17:46:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 17:46:18] magicA244a
[2025-07-27 17:46:18] apptainer works
[2025-07-27 17:46:18] Set ATHENA_PROC_NUMBER=4
[2025-07-27 17:46:18] Set ATHENA_CORE_NUMBER=4
[2025-07-27 17:46:18] Starting ATLAS job with PandaID=6745263869
[2025-07-27 17:46:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 18:58:23]  *** The last 200 lines of the pilot log: ***
[2025-07-27 18:58:23]  is_altstaged=None
[2025-07-27 18:58:23]  is_tar=False
[2025-07-27 18:58:23]  lfn=log.45743349._041314.job.log.tgz.1
[2025-07-27 18:58:23]  mtime=0
[2025-07-27 18:58:23]  protocol_id=None
[2025-07-27 18:58:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 18:58:23]  replicas=None
[2025-07-27 18:58:23]  scope=mc23_13p6TeV
[2025-07-27 18:58:23]  status=None
[2025-07-27 18:58:23]  status_code=0
[2025-07-27 18:58:23]  storage_token=
[2025-07-27 18:58:23]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6745263869/log.45743349._041314.job.log.tgz.1
[2025-07-27 18:58:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d9/1e/log.45743349._041314.job.log.tgz.1
[2025-07-27 18:58:23]  workdir=None
[2025-07-27 18:58:23] ]
[2025-07-27 18:58:23] 2025-07-27 16:57:48,289 | INFO     | transferring file log.45743349._041314.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6745263869/log.45743349._041314.job.log.tgz.1 to /local/data/boinc/
[2025-07-27 18:58:23] 2025-07-27 16:57:48,289 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6745263869/log.45743349._041314.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0413
[2025-07-27 18:58:23] 2025-07-27 16:57:48,302 | INFO     | adding to output.list: log.45743349._041314.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d9/1e/log.45743349._041314.job.log.tg
[2025-07-27 18:58:23] 2025-07-27 16:57:48,303 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 18:58:23] 2025-07-27 16:57:48,303 | INFO     | summary of transferred files:
[2025-07-27 18:58:23] 2025-07-27 16:57:48,303 | INFO     |  -- lfn=log.45743349._041314.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 18:58:23] 2025-07-27 16:57:48,303 | INFO     | stage-out finished correctly
[2025-07-27 18:58:23] 2025-07-27 16:57:48,468 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 18:58:23] 2025-07-27 16:57:48,500 | INFO     | job 6745263869 has state=finished
[2025-07-27 18:58:23] 2025-07-27 16:57:48,500 | INFO     | preparing for final server update for job 6745263869 in state='finished'
[2025-07-27 18:58:23] 2025-07-27 16:57:48,501 | INFO     | this job has now completed (state=finished)
[2025-07-27 18:58:23] 2025-07-27 16:57:48,501 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 18:58:23] 2025-07-27 16:57:48,501 | INFO     | log transfer has been attempted: DONE
[2025-07-27 18:58:23] 2025-07-27 16:57:48,501 | INFO     | job 6745263869 has finished - writing final server update
[2025-07-27 18:58:23] 2025-07-27 16:57:48,501 | INFO     | total number of processed events: 400 (read)
[2025-07-27 18:58:23] 2025-07-27 16:57:48,501 | INFO     | executing command: lscpu
[2025-07-27 18:58:23] 2025-07-27 16:57:48,516 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 18:58:23] 2025-07-27 16:57:50,948 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 18:58:23] 2025-07-27 16:57:50,950 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3460.0858124999995
[2025-07-27 18:58:23] 2025-07-27 16:57:50,951 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745263869/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 18:58:23] 2025-07-27 16:57:50,951 | INFO     | extracted standard info from prmon json
[2025-07-27 18:58:23] 2025-07-27 16:57:50,951 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 18:58:23] 2025-07-27 16:57:50,951 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 18:58:23] 2025-07-27 16:57:50,952 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 18:58:23] 2025-07-27 16:57:50,952 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 18:58:23] 2025-07-27 16:57:50,952 | INFO     | fitting pss+swap vs Time
[2025-07-27 18:58:23] 2025-07-27 16:57:50,952 | INFO     | sum of square deviations: 77515872.0
[2025-07-27 18:58:23] 2025-07-27 16:57:50,952 | INFO     | sum of deviations: -8129594135.000001
[2025-07-27 18:58:23] 2025-07-27 16:57:50,952 | INFO     | mean x: 1753633400.0
[2025-07-27 18:58:23] 2025-07-27 16:57:50,953 | INFO     | mean y: 2526302.8253968256
[2025-07-27 18:58:23] 2025-07-27 16:57:50,953 | INFO     | -- intersect: 183917477341.24124
[2025-07-27 18:58:23] 2025-07-27 16:57:50,953 | INFO     | intersect: 183917477341.24124
[2025-07-27 18:58:23] 2025-07-27 16:57:50,953 | INFO     | chi2: 0.07780587631153013
[2025-07-27 18:58:23] 2025-07-27 16:57:50,953 | INFO     | -- intersect: 183917477341.24124
[2025-07-27 18:58:23] 2025-07-27 16:57:50,953 | INFO     | current memory leak: -104.88 B/s (using 63 data points, chi2=0.08)
[2025-07-27 18:58:23] 2025-07-27 16:57:50,953 | INFO     | could have reported an average CPU frequency of 3795 MHz (6 samples)
[2025-07-27 18:58:23] 2025-07-27 16:57:50,953 | INFO     | ..............................
[2025-07-27 18:58:23] 2025-07-27 16:57:50,953 | INFO     | . Timing measurements:
[2025-07-27 18:58:23] 2025-07-27 16:57:50,953 | INFO     | . get job = 0 s
[2025-07-27 18:58:23] 2025-07-27 16:57:50,953 | INFO     | . initial setup = 1 s
[2025-07-27 18:58:23] 2025-07-27 16:57:50,953 | INFO     | . payload setup = 3 s
[2025-07-27 18:58:23] 2025-07-27 16:57:50,953 | INFO     | . stage-in = 0 s
[2025-07-27 18:58:23] 2025-07-27 16:57:50,953 | INFO     | . payload execution = 4266 s
[2025-07-27 18:58:23] 2025-07-27 16:57:50,953 | INFO     | . stage-out = 0 s
[2025-07-27 18:58:23] 2025-07-27 16:57:50,953 | INFO     | . log creation = 0 s
[2025-07-27 18:58:23] 2025-07-27 16:57:50,953 | INFO     | ..............................
[2025-07-27 18:58:23] 2025-07-27 16:57:51,207 | INFO     | 
[2025-07-27 18:58:23] 2025-07-27 16:57:51,207 | INFO     | job summary report
[2025-07-27 18:58:23] 2025-07-27 16:57:51,207 | INFO     | --------------------------------------------------
[2025-07-27 18:58:23] 2025-07-27 16:57:51,207 | INFO     | PanDA job id: 6745263869
[2025-07-27 18:58:23] 2025-07-27 16:57:51,207 | INFO     | task id: 45743349
[2025-07-27 18:58:23] 2025-07-27 16:57:51,207 | INFO     | errors: (none)
[2025-07-27 18:58:23] 2025-07-27 16:57:51,207 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 18:58:23] 2025-07-27 16:57:51,207 | INFO     | pilot state: finished 
[2025-07-27 18:58:23] 2025-07-27 16:57:51,207 | INFO     | transexitcode: 0
[2025-07-27 18:58:23] 2025-07-27 16:57:51,207 | INFO     | exeerrorcode: 0
[2025-07-27 18:58:23] 2025-07-27 16:57:51,207 | INFO     | exeerrordiag: 
[2025-07-27 18:58:23] 2025-07-27 16:57:51,207 | INFO     | exitcode: 0
[2025-07-27 18:58:23] 2025-07-27 16:57:51,207 | INFO     | exitmsg: OK
[2025-07-27 18:58:23] 2025-07-27 16:57:51,207 | INFO     | cpuconsumptiontime: 16048 s
[2025-07-27 18:58:23] 2025-07-27 16:57:51,208 | INFO     | nevents: 400
[2025-07-27 18:58:23] 2025-07-27 16:57:51,208 | INFO     | neventsw: 0
[2025-07-27 18:58:23] 2025-07-27 16:57:51,208 | INFO     | pid: 1714931
[2025-07-27 18:58:23] 2025-07-27 16:57:51,208 | INFO     | pgrp: 1714931
[2025-07-27 18:58:23] 2025-07-27 16:57:51,208 | INFO     | corecount: 4
[2025-07-27 18:58:23] 2025-07-27 16:57:51,208 | INFO     | event service: False
[2025-07-27 18:58:23] 2025-07-27 16:57:51,208 | INFO     | sizes: {0: 2397478, 2: 2397740, 10: 2397768, 4271: 2432985, 4274: 2433123}
[2025-07-27 18:58:23] 2025-07-27 16:57:51,208 | INFO     | --------------------------------------------------
[2025-07-27 18:58:23] 2025-07-27 16:57:51,208 | INFO     | 
[2025-07-27 18:58:23] 2025-07-27 16:57:51,208 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-27 18:58:23] 2025-07-27 16:57:51,223 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 18:58:23] 2025-07-27 16:57:51,224 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 18:58:23] 2025-07-27 16:57:51,224 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 18:58:23] 2025-07-27 16:57:51,224 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 18:58:23] 2025-07-27 16:57:51,224 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 18:58:23] 2025-07-27 16:57:51,224 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 18:58:23] 2025-07-27 16:57:51,224 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 18:58:23] 2025-07-27 16:57:51,224 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 18:58:23] 2025-07-27 16:57:51,224 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 18:58:23] 2025-07-27 16:57:51,224 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 18:58:23] 2025-07-27 16:57:51,224 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 18:58:23] 2025-07-27 16:57:51,224 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 18:58:23] 2025-07-27 16:57:51,224 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 18:58:23] 2025-07-27 16:57:51,224 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 18:58:23] 2025-07-27 16:57:51,224 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 18:58:23] 2025-07-27 16:57:51,224 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 18:58:23] 2025-07-27 16:57:51,224 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 18:58:23] 2025-07-27 16:57:51,224 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 18:58:23] 2025-07-27 16:57:51,224 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 18:58:23] 2025-07-27 16:57:51,224 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 18:58:23] 2025-07-27 16:57:51,224 | INFO     | job 6745263869 has completed (purged errors)
[2025-07-27 18:58:23] 2025-07-27 16:57:51,225 | INFO     | overall cleanup function is called
[2025-07-27 18:58:23] 2025-07-27 16:57:52,231 | INFO     | --- collectZombieJob: --- 10, [1714931]
[2025-07-27 18:58:23] 2025-07-27 16:57:52,231 | INFO     | zombie collector waiting for pid 1714931
[2025-07-27 18:58:23] 2025-07-27 16:57:52,232 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 18:58:23] 2025-07-27 16:57:52,232 | INFO     | collected zombie processes
[2025-07-27 18:58:23] 2025-07-27 16:57:52,232 | INFO     | will attempt to kill all subprocesses of pid=1714931
[2025-07-27 18:58:23] 2025-07-27 16:57:52,274 | INFO     | process IDs to be killed: [1714931] (in reverse order)
[2025-07-27 18:58:23] 2025-07-27 16:57:52,298 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 18:58:23] 2025-07-27 16:57:52,299 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 18:58:23] 2025-07-27 16:57:52,300 | INFO     | did not find any defunct processes belonging to 1714931
[2025-07-27 18:58:23] 2025-07-27 16:57:52,301 | INFO     | did not find any defunct processes belonging to 1714931
[2025-07-27 18:58:23] 2025-07-27 16:57:52,301 | INFO     | ready for new job
[2025-07-27 18:58:23] 2025-07-27 16:57:52,301 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 18:58:23] 2025-07-27 16:57:52,302 | INFO     | ***************************************
[2025-07-27 18:58:23] 2025-07-27 16:57:52,302 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 18:58:23] 2025-07-27 16:57:52,302 | INFO     | ***************************************
[2025-07-27 18:58:23] 2025-07-27 16:57:52,302 | INFO     | 
[2025-07-27 18:58:23] 2025-07-27 16:57:52,302 | INFO     | architecture information:
[2025-07-27 18:58:23] 2025-07-27 16:57:52,302 | INFO     | executing command: cat /etc/os-release
[2025-07-27 18:58:23] 2025-07-27 16:57:52,311 | INFO     | cat /etc/os-release:
[2025-07-27 18:58:23] NAME="CentOS Linux"
[2025-07-27 18:58:23] VERSION="7 (Core)"
[2025-07-27 18:58:23] ID="centos"
[2025-07-27 18:58:23] ID_LIKE="rhel fedora"
[2025-07-27 18:58:23] VERSION_ID="7"
[2025-07-27 18:58:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 18:58:23] ANSI_COLOR="0;31"
[2025-07-27 18:58:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 18:58:23] HOME_URL="https://www.centos.org/"
[2025-07-27 18:58:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 18:58:23] 
[2025-07-27 18:58:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 18:58:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 18:58:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 18:58:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 18:58:23] 
[2025-07-27 18:58:23] 2025-07-27 16:57:52,311 | INFO     | ***************************************
[2025-07-27 18:58:23] 2025-07-27 16:57:52,379 | WARNING  | process 1714931 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 18:58:23] 2025-07-27 16:57:52,408 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 18:58:23] 2025-07-27 16:57:52,445 | INFO     | number of running child processes to parent process 1714931: 1
[2025-07-27 18:58:23] 2025-07-27 16:57:52,445 | INFO     | maximum number of monitored processes: 6
[2025-07-27 18:58:23] 2025-07-27 16:57:52,445 | INFO     | aborting job monitoring since job object (job id=6745263869) has expired
[2025-07-27 18:58:23] 2025-07-27 16:57:52,814 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-27 18:58:23] 2025-07-27 16:57:52,827 | INFO     | sufficient remaining disk space (319603867648 B)
[2025-07-27 18:58:23] 2025-07-27 16:57:52,828 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 18:58:23] 2025-07-27 16:57:52,828 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 18:58:23] 2025-07-27 16:57:52,828 | INFO     | update_server=False
[2025-07-27 18:58:23] 2025-07-27 16:57:52,828 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 18:58:23] 2025-07-27 16:57:52,828 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:58:23] 2025-07-27 16:57:52,828 | INFO     | will abort loop
[2025-07-27 18:58:23] 2025-07-27 16:57:52,828 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 18:58:23] 2025-07-27 16:57:53,225 | INFO     | all job control threads have been joined
[2025-07-27 18:58:23] 2025-07-27 16:57:53,523 | INFO     | all data control threads have been joined
[2025-07-27 18:58:23] 2025-07-27 16:57:53,807 | INFO     | all payload control threads have been joined
[2025-07-27 18:58:23] 2025-07-27 16:57:53,833 | INFO     | [job] queue monitor thread has finished
[2025-07-27 18:58:23] 2025-07-27 16:57:53,834 | INFO     | [job] retrieve thread has finished
[2025-07-27 18:58:23] 2025-07-27 16:57:53,834 | INFO     | [job] job monitor thread has finished
[2025-07-27 18:58:23] 2025-07-27 16:57:53,840 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 18:58:23] 2025-07-27 16:57:54,231 | INFO     | [job] control thread has finished
[2025-07-27 18:58:23] 2025-07-27 16:57:54,508 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 18:58:23] 2025-07-27 16:57:54,528 | INFO     | [data] control thread has finished
[2025-07-27 18:58:23] 2025-07-27 16:57:54,656 | INFO     | [payload] failed_post thread has finished
[2025-07-27 18:58:23] 2025-07-27 16:57:54,813 | INFO     | [payload] control thread has finished
[2025-07-27 18:58:23] 2025-07-27 16:57:54,905 | INFO     | [data] copytool_in thread has finished
[2025-07-27 18:58:23] 2025-07-27 16:57:54,997 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 18:58:23] 2025-07-27 16:57:55,143 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 18:58:23] 2025-07-27 16:57:55,220 | INFO     | [job] validate thread has finished
[2025-07-27 18:58:23] 2025-07-27 16:57:55,319 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 18:58:23] 2025-07-27 16:57:55,327 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 18:58:23] 2025-07-27 16:57:55,428 | INFO     | [payload] validate_post thread has finished
[2025-07-27 18:58:23] 2025-07-27 16:57:55,846 | INFO     | [data] copytool_out thread has finished
[2025-07-27 18:58:23] 2025-07-27 16:57:58,515 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 18:58:23] 2025-07-27 16:57:59,759 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139945459480384)>', '<ExcThread(monitor, started 139944957814528)>']
[2025-07-27 18:58:23] 2025-07-27 16:58:04,783 | INFO     | all workflow threads have been joined
[2025-07-27 18:58:23] 2025-07-27 16:58:04,783 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 18:58:23] 2025-07-27 16:58:04,783 | INFO     | traces error code: 0
[2025-07-27 18:58:23] 2025-07-27 16:58:04,783 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 18:58:23] 2025-07-27 16:58:23,738 | INFO     | PID=1708325 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 18:58:23] 2025-07-27 16:58:23,738 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 18:58:23] 2025-07-27 16:58:23,738 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 18:58:23] 2025-07-27 16:58:23,738 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 18:58:23] 2025-07-27 16:58:23,738 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 18:58:23] 2025-07-27 16:58:23,738 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 18:58:23] 2025-07-27 16:58:23,738 | INFO     | [monitor] control thread has ended
[2025-07-27 18:58:23] 2025-07-27 16:58:23,791 [wrapper] ==== pilot stdout END ====
[2025-07-27 18:58:23] 2025-07-27 16:58:23,793 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 18:58:23] 2025-07-27 16:58:23,796 [wrapper] pilotpid: 1708325
[2025-07-27 18:58:23] 2025-07-27 16:58:23,798 [wrapper] Pilot exit status: 0
[2025-07-27 18:58:23] 2025-07-27 16:58:23,806 [wrapper] pandaids: 6745263869
[2025-07-27 18:58:23] 2025-07-27 16:58:23,824 [wrapper] cleanup supervisor_pilot 1724998 1708326
[2025-07-27 18:58:23] 2025-07-27 16:58:23,826 [wrapper] Test setup, not cleaning
[2025-07-27 18:58:23] 2025-07-27 16:58:23,829 [wrapper] apfmon messages muted
[2025-07-27 18:58:23] 2025-07-27 16:58:23,831 [wrapper] ==== wrapper stdout END ====
[2025-07-27 18:58:23] 2025-07-27 16:58:23,834 [wrapper] ==== wrapper stderr END ====
[2025-07-27 18:58:23]  *** Error codes and diagnostics ***
[2025-07-27 18:58:23]     "exeErrorCode": 0,
[2025-07-27 18:58:23]     "exeErrorDiag": "",
[2025-07-27 18:58:23]     "pilotErrorCode": 0,
[2025-07-27 18:58:23]     "pilotErrorDiag": "",
[2025-07-27 18:58:23]  *** Listing of results directory ***
[2025-07-27 18:58:23] total 351948
[2025-07-27 18:58:23] -rw-r--r-- 1 boinc boinc    530466 Jul 26 18:45 pilot3.tar.gz
[2025-07-27 18:58:23] -rw-r--r-- 1 boinc boinc      5112 Jul 26 18:56 queuedata.json
[2025-07-27 18:58:23] -rwx------ 1 boinc boinc     36292 Jul 26 18:59 runpilot2-wrapper.sh
[2025-07-27 18:58:23] -rw-r--r-- 1 boinc boinc       100 Jul 27 17:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 18:58:23] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 17:46 run_atlas
[2025-07-27 18:58:23] -rw-r--r-- 1 boinc boinc       105 Jul 27 17:46 job.xml
[2025-07-27 18:58:23] -rw-r--r-- 2 boinc boinc 144545751 Jul 27 17:46 EVNT.45743347._002452.pool.root.1
[2025-07-27 18:58:23] -rw-r--r-- 2 boinc boinc    542893 Jul 27 17:46 input.tar.gz
[2025-07-27 18:58:23] -rw-r--r-- 2 boinc boinc     15095 Jul 27 17:46 start_atlas.sh
[2025-07-27 18:58:23] drwxrwx--x 2 boinc boinc      4096 Jul 27 17:46 shared
[2025-07-27 18:58:23] -rw-r--r-- 1 boinc boinc         0 Jul 27 17:46 boinc_setup_complete
[2025-07-27 18:58:23] -rw-r--r-- 1 boinc boinc      6515 Jul 27 17:46 init_data.xml
[2025-07-27 18:58:23] -rw-r--r-- 1 boinc boinc         0 Jul 27 17:46 boinc_lockfile
[2025-07-27 18:58:23] -rw-r--r-- 1 boinc boinc      2563 Jul 27 17:46 pandaJob.out
[2025-07-27 18:58:23] -rw------- 1 boinc boinc    980101 Jul 27 17:46 agis_schedconf.cvmfs.json
[2025-07-27 18:58:23] -rw------- 1 boinc boinc   1593052 Jul 27 17:46 agis_ddmendpoints.agis.ALL.json
[2025-07-27 18:58:23] drwx------ 4 boinc boinc      4096 Jul 27 17:46 pilot3
[2025-07-27 18:58:23] -rw------- 1 boinc boinc 210659039 Jul 27 18:57 HITS.45743349._041314.pool.root.1
[2025-07-27 18:58:23] -rw-r--r-- 1 boinc boinc       529 Jul 27 18:57 boinc_task_state.xml
[2025-07-27 18:58:23] -rw------- 1 boinc boinc        95 Jul 27 18:57 pilot_heartbeat.json
[2025-07-27 18:58:23] -rw------- 1 boinc boinc      1018 Jul 27 18:57 memory_monitor_summary.json
[2025-07-27 18:58:23] -rw------- 1 boinc boinc    235940 Jul 27 18:57 log.45743349._041314.job.log.tgz.1
[2025-07-27 18:58:23] -rw------- 1 boinc boinc      7761 Jul 27 18:57 heartbeat.json
[2025-07-27 18:58:23] -rw-r--r-- 1 boinc boinc      8192 Jul 27 18:58 boinc_mmap_file
[2025-07-27 18:58:23] -rw-r--r-- 1 boinc boinc        27 Jul 27 18:58 wrapper_checkpoint.txt
[2025-07-27 18:58:23] -rw------- 1 boinc boinc       817 Jul 27 18:58 pilotlog.txt
[2025-07-27 18:58:23] -rw------- 1 boinc boinc    425775 Jul 27 18:58 log.45743349._041314.job.log.1
[2025-07-27 18:58:23] -rw------- 1 boinc boinc       357 Jul 27 18:58 output.list
[2025-07-27 18:58:23] -rw-r--r-- 1 boinc boinc       620 Jul 27 18:58 runtime_log
[2025-07-27 18:58:23] -rw------- 1 boinc boinc    675840 Jul 27 18:58 result.tar.gz
[2025-07-27 18:58:23] -rw-r--r-- 1 boinc boinc      8754 Jul 27 18:58 runtime_log.err
[2025-07-27 18:58:23] -rw------- 1 boinc boinc       662 Jul 27 18:58 SapLDmnPxz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtfSLDm3lzbXn.diag
[2025-07-27 18:58:23] -rw-r--r-- 1 boinc boinc     21453 Jul 27 18:58 stderr.txt
[2025-07-27 18:58:23] HITS file was successfully produced:
[2025-07-27 18:58:23] -rw------- 1 boinc boinc 210659039 Jul 27 18:57 shared/HITS.pool.root.1
[2025-07-27 18:58:23]  *** Contents of shared directory: ***
[2025-07-27 18:58:23] total 348096
[2025-07-27 18:58:23] -rw-r--r-- 2 boinc boinc 144545751 Jul 27 17:46 ATLAS.root_0
[2025-07-27 18:58:23] -rw-r--r-- 2 boinc boinc    542893 Jul 27 17:46 input.tar.gz
[2025-07-27 18:58:23] -rw-r--r-- 2 boinc boinc     15095 Jul 27 17:46 start_atlas.sh
[2025-07-27 18:58:23] -rw------- 1 boinc boinc 210659039 Jul 27 18:57 HITS.pool.root.1
[2025-07-27 18:58:23] -rw------- 1 boinc boinc    675840 Jul 27 18:58 result.tar.gz
18:58:25 (1704629): run_atlas exited; CPU time 16061.167343
18:58:25 (1704629): called boinc_finish(0)

</stderr_txt>
]]>

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