Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:46:51 (13977): wrapper (7.7.26015): starting
23:46:51 (13977): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 23:46:51] Arguments: --nthreads 12
[2025-07-26 23:46:51] Threads: 12
[2025-07-26 23:46:51] Checking for CVMFS
[2025-07-26 23:46:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 23:46:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 23:46:51] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 23:46:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 23:46:51] 2.11.2.0 2924 111434 96436 148799 1 57 14945488 20275201 1 130560 0 39390952 99.972 10244779 11255 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 23:46:51] CVMFS is ok
[2025-07-26 23:46:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 23:46:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 23:46:51] Further information can be found at the LHC@home message board.
[2025-07-26 23:46:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 23:46:51] Checking for apptainer binary...
[2025-07-26 23:46:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 23:46:51] Running /usr/bin/apptainer --version
[2025-07-26 23:46:51] apptainer version 1.3.2-1.el7
[2025-07-26 23:46:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 23:46:53] c-205-28.aglt2.org
[2025-07-26 23:46:53] apptainer works
[2025-07-26 23:46:53] Set ATHENA_PROC_NUMBER=12
[2025-07-26 23:46:53] Set ATHENA_CORE_NUMBER=12
[2025-07-26 23:46:53] Starting ATLAS job with PandaID=6745835359
[2025-07-26 23:46:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 01:10:47]  *** The last 200 lines of the pilot log: ***
[2025-07-27 01:10:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 01:10:47]  replicas=None
[2025-07-27 01:10:47]  scope=mc23_13p6TeV
[2025-07-27 01:10:47]  status=None
[2025-07-27 01:10:47]  status_code=0
[2025-07-27 01:10:47]  storage_token=
[2025-07-27 01:10:47]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745835359/log.45743349._045465.job.log.tgz.1
[2025-07-27 01:10:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bf/c0/log.45743349._045465.job.log.tgz.1
[2025-07-27 01:10:47]  workdir=None
[2025-07-27 01:10:47] ]
[2025-07-27 01:10:47] 2025-07-27 05:10:07,336 | INFO     | transferring file log.45743349._045465.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745835359/log.45743349._045465.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 01:10:47] 2025-07-27 05:10:07,336 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745835359/log.45743349._045465.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._045465.job
[2025-07-27 01:10:47] 2025-07-27 05:10:07,360 | INFO     | adding to output.list: log.45743349._045465.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bf/c0/log.45743349._045465.job.log.tg
[2025-07-27 01:10:47] 2025-07-27 05:10:07,361 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 01:10:47] 2025-07-27 05:10:07,361 | INFO     | summary of transferred files:
[2025-07-27 01:10:47] 2025-07-27 05:10:07,361 | INFO     |  -- lfn=log.45743349._045465.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 01:10:47] 2025-07-27 05:10:07,362 | INFO     | stage-out finished correctly
[2025-07-27 01:10:47] 2025-07-27 05:10:07,469 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 01:10:47] 2025-07-27 05:10:07,641 | INFO     | monitor loop #371: job 0:6745835359 is in state 'finished'
[2025-07-27 01:10:47] 2025-07-27 05:10:07,642 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 01:10:47] 2025-07-27 05:10:10,145 | INFO     | monitor loop #372: job 0:6745835359 is in state 'finished'
[2025-07-27 01:10:47] 2025-07-27 05:10:10,145 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 01:10:47] 2025-07-27 05:10:10,386 | INFO     | job 6745835359 has state=finished
[2025-07-27 01:10:47] 2025-07-27 05:10:10,386 | INFO     | preparing for final server update for job 6745835359 in state='finished'
[2025-07-27 01:10:47] 2025-07-27 05:10:10,387 | INFO     | this job has now completed (state=finished)
[2025-07-27 01:10:47] 2025-07-27 05:10:10,387 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 01:10:47] 2025-07-27 05:10:10,387 | INFO     | log transfer has been attempted: DONE
[2025-07-27 01:10:47] 2025-07-27 05:10:10,387 | INFO     | job 6745835359 has finished - writing final server update
[2025-07-27 01:10:47] 2025-07-27 05:10:10,388 | INFO     | total number of processed events: 400 (read)
[2025-07-27 01:10:47] 2025-07-27 05:10:10,389 | INFO     | executing command: lscpu
[2025-07-27 01:10:47] 2025-07-27 05:10:10,414 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 01:10:47] 2025-07-27 05:10:12,646 | INFO     | monitor loop #373: job 0:6745835359 is in state 'finished'
[2025-07-27 01:10:47] 2025-07-27 05:10:12,646 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 01:10:47] 2025-07-27 05:10:14,308 | INFO     | 4990s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-27 01:10:47] 2025-07-27 05:10:15,149 | INFO     | monitor loop #374: job 0:6745835359 is in state 'finished'
[2025-07-27 01:10:47] 2025-07-27 05:10:15,149 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 01:10:47] 2025-07-27 05:10:15,538 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 01:10:47] 2025-07-27 05:10:15,542 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-07-27 01:10:47] 2025-07-27 05:10:15,544 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745835359/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 01:10:47] 2025-07-27 05:10:15,545 | INFO     | extracted standard info from prmon json
[2025-07-27 01:10:47] 2025-07-27 05:10:15,545 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 01:10:47] 2025-07-27 05:10:15,545 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 01:10:47] 2025-07-27 05:10:15,545 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 01:10:47] 2025-07-27 05:10:15,546 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 01:10:47] 2025-07-27 05:10:15,547 | INFO     | fitting pss+swap vs Time
[2025-07-27 01:10:47] 2025-07-27 05:10:15,547 | INFO     | sum of square deviations: 130793150.0
[2025-07-27 01:10:47] 2025-07-27 05:10:15,548 | INFO     | sum of deviations: -9170337522.0
[2025-07-27 01:10:47] 2025-07-27 05:10:15,548 | INFO     | mean x: 1753590619.0
[2025-07-27 01:10:47] 2025-07-27 05:10:15,548 | INFO     | mean y: 2774045.7066666665
[2025-07-27 01:10:47] 2025-07-27 05:10:15,548 | INFO     | -- intersect: 122952774497.89323
[2025-07-27 01:10:47] 2025-07-27 05:10:15,548 | INFO     | intersect: 122952774497.89323
[2025-07-27 01:10:47] 2025-07-27 05:10:15,548 | INFO     | chi2: 0.057185498888094335
[2025-07-27 01:10:47] 2025-07-27 05:10:15,549 | INFO     | -- intersect: 122952774497.89323
[2025-07-27 01:10:47] 2025-07-27 05:10:15,549 | INFO     | current memory leak: -70.11 B/s (using 75 data points, chi2=0.06)
[2025-07-27 01:10:47] 2025-07-27 05:10:15,549 | INFO     | could have reported an average CPU frequency of 2060 MHz (6 samples)
[2025-07-27 01:10:47] 2025-07-27 05:10:15,549 | INFO     | ..............................
[2025-07-27 01:10:47] 2025-07-27 05:10:15,549 | INFO     | . Timing measurements:
[2025-07-27 01:10:47] 2025-07-27 05:10:15,549 | INFO     | . get job = 0 s
[2025-07-27 01:10:47] 2025-07-27 05:10:15,549 | INFO     | . initial setup = 2 s
[2025-07-27 01:10:47] 2025-07-27 05:10:15,549 | INFO     | . payload setup = 9 s
[2025-07-27 01:10:47] 2025-07-27 05:10:15,550 | INFO     | . stage-in = 0 s
[2025-07-27 01:10:47] 2025-07-27 05:10:15,550 | INFO     | . payload execution = 4951 s
[2025-07-27 01:10:47] 2025-07-27 05:10:15,550 | INFO     | . stage-out = 0 s
[2025-07-27 01:10:47] 2025-07-27 05:10:15,550 | INFO     | . log creation = 0 s
[2025-07-27 01:10:47] 2025-07-27 05:10:15,550 | INFO     | ..............................
[2025-07-27 01:10:47] 2025-07-27 05:10:15,807 | INFO     | 
[2025-07-27 01:10:47] 2025-07-27 05:10:15,807 | INFO     | job summary report
[2025-07-27 01:10:47] 2025-07-27 05:10:15,807 | INFO     | --------------------------------------------------
[2025-07-27 01:10:47] 2025-07-27 05:10:15,807 | INFO     | PanDA job id: 6745835359
[2025-07-27 01:10:47] 2025-07-27 05:10:15,807 | INFO     | task id: 45743349
[2025-07-27 01:10:47] 2025-07-27 05:10:15,808 | INFO     | errors: (none)
[2025-07-27 01:10:47] 2025-07-27 05:10:15,808 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 01:10:47] 2025-07-27 05:10:15,808 | INFO     | pilot state: finished 
[2025-07-27 01:10:47] 2025-07-27 05:10:15,808 | INFO     | transexitcode: 0
[2025-07-27 01:10:47] 2025-07-27 05:10:15,808 | INFO     | exeerrorcode: 0
[2025-07-27 01:10:47] 2025-07-27 05:10:15,808 | INFO     | exeerrordiag: 
[2025-07-27 01:10:47] 2025-07-27 05:10:15,808 | INFO     | exitcode: 0
[2025-07-27 01:10:47] 2025-07-27 05:10:15,809 | INFO     | exitmsg: OK
[2025-07-27 01:10:47] 2025-07-27 05:10:15,809 | INFO     | cpuconsumptiontime: 54286 s
[2025-07-27 01:10:47] 2025-07-27 05:10:15,809 | INFO     | nevents: 400
[2025-07-27 01:10:47] 2025-07-27 05:10:15,809 | INFO     | neventsw: 0
[2025-07-27 01:10:47] 2025-07-27 05:10:15,809 | INFO     | pid: 24161
[2025-07-27 01:10:47] 2025-07-27 05:10:15,809 | INFO     | pgrp: 24161
[2025-07-27 01:10:47] 2025-07-27 05:10:15,809 | INFO     | corecount: 12
[2025-07-27 01:10:47] 2025-07-27 05:10:15,810 | INFO     | event service: False
[2025-07-27 01:10:47] 2025-07-27 05:10:15,810 | INFO     | sizes: {0: 2397246, 1: 2397501, 6: 2397763, 12: 2397791, 4965: 2424036, 4966: 2433218, 4974: 2433356}
[2025-07-27 01:10:47] 2025-07-27 05:10:15,810 | INFO     | --------------------------------------------------
[2025-07-27 01:10:47] 2025-07-27 05:10:15,810 | INFO     | 
[2025-07-27 01:10:47] 2025-07-27 05:10:15,810 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 01:10:47] 2025-07-27 05:10:15,835 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 01:10:47] 2025-07-27 05:10:15,835 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 01:10:47] 2025-07-27 05:10:15,836 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 01:10:47] 2025-07-27 05:10:15,836 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 01:10:47] 2025-07-27 05:10:15,836 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 01:10:47] 2025-07-27 05:10:15,836 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 01:10:47] 2025-07-27 05:10:15,836 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 01:10:47] 2025-07-27 05:10:15,836 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 01:10:47] 2025-07-27 05:10:15,837 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 01:10:47] 2025-07-27 05:10:15,837 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 01:10:47] 2025-07-27 05:10:15,837 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 01:10:47] 2025-07-27 05:10:15,837 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 01:10:47] 2025-07-27 05:10:15,837 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 01:10:47] 2025-07-27 05:10:15,837 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 01:10:47] 2025-07-27 05:10:15,838 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 01:10:47] 2025-07-27 05:10:15,838 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 01:10:47] 2025-07-27 05:10:15,838 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 01:10:47] 2025-07-27 05:10:15,838 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 01:10:47] 2025-07-27 05:10:15,838 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 01:10:47] 2025-07-27 05:10:15,839 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 01:10:47] 2025-07-27 05:10:15,839 | INFO     | job 6745835359 has completed (purged errors)
[2025-07-27 01:10:47] 2025-07-27 05:10:15,839 | INFO     | overall cleanup function is called
[2025-07-27 01:10:47] 2025-07-27 05:10:16,847 | INFO     | --- collectZombieJob: --- 10, [24161]
[2025-07-27 01:10:47] 2025-07-27 05:10:16,847 | INFO     | zombie collector waiting for pid 24161
[2025-07-27 01:10:47] 2025-07-27 05:10:16,848 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 01:10:47] 2025-07-27 05:10:16,848 | INFO     | collected zombie processes
[2025-07-27 01:10:47] 2025-07-27 05:10:16,848 | INFO     | will attempt to kill all subprocesses of pid=24161
[2025-07-27 01:10:47] 2025-07-27 05:10:16,938 | INFO     | process IDs to be killed: [24161] (in reverse order)
[2025-07-27 01:10:47] 2025-07-27 05:10:16,989 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 01:10:47] 2025-07-27 05:10:16,989 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 01:10:47] 2025-07-27 05:10:16,993 | INFO     | did not find any defunct processes belonging to 24161
[2025-07-27 01:10:47] 2025-07-27 05:10:16,995 | INFO     | did not find any defunct processes belonging to 24161
[2025-07-27 01:10:47] 2025-07-27 05:10:16,995 | INFO     | ready for new job
[2025-07-27 01:10:47] 2025-07-27 05:10:16,996 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 01:10:47] 2025-07-27 05:10:16,997 | INFO     | ***************************************
[2025-07-27 01:10:47] 2025-07-27 05:10:16,997 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 01:10:47] 2025-07-27 05:10:16,997 | INFO     | ***************************************
[2025-07-27 01:10:47] 2025-07-27 05:10:16,997 | INFO     | 
[2025-07-27 01:10:47] 2025-07-27 05:10:16,997 | INFO     | architecture information:
[2025-07-27 01:10:47] 2025-07-27 05:10:16,998 | INFO     | executing command: cat /etc/os-release
[2025-07-27 01:10:47] 2025-07-27 05:10:17,013 | INFO     | cat /etc/os-release:
[2025-07-27 01:10:47] NAME="CentOS Linux"
[2025-07-27 01:10:47] VERSION="7 (Core)"
[2025-07-27 01:10:47] ID="centos"
[2025-07-27 01:10:47] ID_LIKE="rhel fedora"
[2025-07-27 01:10:47] VERSION_ID="7"
[2025-07-27 01:10:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 01:10:47] ANSI_COLOR="0;31"
[2025-07-27 01:10:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 01:10:47] HOME_URL="https://www.centos.org/"
[2025-07-27 01:10:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 01:10:47] 
[2025-07-27 01:10:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 01:10:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 01:10:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 01:10:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 01:10:47] 
[2025-07-27 01:10:47] 2025-07-27 05:10:17,013 | INFO     | ***************************************
[2025-07-27 01:10:47] 2025-07-27 05:10:17,516 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 01:10:47] 2025-07-27 05:10:17,532 | INFO     | sufficient remaining disk space (29518462976 B)
[2025-07-27 01:10:47] 2025-07-27 05:10:17,532 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 01:10:47] 2025-07-27 05:10:17,532 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 01:10:47] 2025-07-27 05:10:17,533 | INFO     | update_server=False
[2025-07-27 01:10:47] 2025-07-27 05:10:17,533 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 01:10:47] 2025-07-27 05:10:17,533 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 01:10:47] 2025-07-27 05:10:17,658 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 01:10:47] 2025-07-27 05:10:17,658 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 01:10:47] 2025-07-27 05:10:17,658 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 01:10:47] 2025-07-27 05:10:17,658 | INFO     | will abort loop
[2025-07-27 01:10:47] 2025-07-27 05:10:17,960 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 01:10:47] 2025-07-27 05:10:18,064 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 01:10:47] 2025-07-27 05:10:18,232 | INFO     | all payload control threads have been joined
[2025-07-27 01:10:47] 2025-07-27 05:10:18,249 | INFO     | all job control threads have been joined
[2025-07-27 01:10:47] 2025-07-27 05:10:18,484 | INFO     | all data control threads have been joined
[2025-07-27 01:10:47] 2025-07-27 05:10:18,538 | INFO     | [job] retrieve thread has finished
[2025-07-27 01:10:47] 2025-07-27 05:10:18,539 | INFO     | [job] queue monitor thread has finished
[2025-07-27 01:10:47] 2025-07-27 05:10:18,562 | INFO     | [job] validate thread has finished
[2025-07-27 01:10:47] 2025-07-27 05:10:18,659 | INFO     | [job] job monitor thread has finished
[2025-07-27 01:10:47] 2025-07-27 05:10:18,788 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 01:10:47] 2025-07-27 05:10:18,809 | INFO     | [payload] validate_post thread has finished
[2025-07-27 01:10:47] 2025-07-27 05:10:18,835 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 01:10:47] 2025-07-27 05:10:19,082 | INFO     | [payload] failed_post thread has finished
[2025-07-27 01:10:47] 2025-07-27 05:10:19,150 | INFO     | [data] copytool_in thread has finished
[2025-07-27 01:10:47] 2025-07-27 05:10:19,237 | INFO     | [payload] control thread has finished
[2025-07-27 01:10:47] 2025-07-27 05:10:19,255 | INFO     | [job] control thread has finished
[2025-07-27 01:10:47] 2025-07-27 05:10:19,486 | INFO     | [data] control thread has finished
[2025-07-27 01:10:47] 2025-07-27 05:10:19,525 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 01:10:47] 2025-07-27 05:10:19,892 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 01:10:47] 2025-07-27 05:10:19,966 | INFO     | [data] copytool_out thread has finished
[2025-07-27 01:10:47] 2025-07-27 05:10:22,070 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 01:10:47] 2025-07-27 05:10:22,441 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139959165937472)>', '<ExcThread(monitor, started 139958312478464)>']
[2025-07-27 01:10:47] 2025-07-27 05:10:27,467 | INFO     | all workflow threads have been joined
[2025-07-27 01:10:47] 2025-07-27 05:10:27,467 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 01:10:47] 2025-07-27 05:10:27,467 | INFO     | traces error code: 0
[2025-07-27 01:10:47] 2025-07-27 05:10:27,469 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 01:10:47] 2025-07-27 05:10:47,501 | INFO     | PID=17624 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 01:10:47] 2025-07-27 05:10:47,501 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 01:10:47] 2025-07-27 05:10:47,502 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 01:10:47] 2025-07-27 05:10:47,502 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 01:10:47] 2025-07-27 05:10:47,502 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 01:10:47] 2025-07-27 05:10:47,502 | INFO     | [monitor] control thread has ended
[2025-07-27 01:10:47] 2025-07-27 05:10:47,597 [wrapper] ==== pilot stdout END ====
[2025-07-27 01:10:47] 2025-07-27 05:10:47,601 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 01:10:47] 2025-07-27 05:10:47,604 [wrapper] pilotpid: 17624
[2025-07-27 01:10:47] 2025-07-27 05:10:47,608 [wrapper] Pilot exit status: 0
[2025-07-27 01:10:47] 2025-07-27 05:10:47,623 [wrapper] pandaids: 6745835359
[2025-07-27 01:10:47] 2025-07-27 05:10:47,663 [wrapper] cleanup supervisor_pilot  4173 17625
[2025-07-27 01:10:47] 2025-07-27 05:10:47,667 [wrapper] Test setup, not cleaning
[2025-07-27 01:10:47] 2025-07-27 05:10:47,671 [wrapper] apfmon messages muted
[2025-07-27 01:10:47] 2025-07-27 05:10:47,675 [wrapper] ==== wrapper stdout END ====
[2025-07-27 01:10:47] 2025-07-27 05:10:47,679 [wrapper] ==== wrapper stderr END ====
[2025-07-27 01:10:47]  *** Error codes and diagnostics ***
[2025-07-27 01:10:47]     "exeErrorCode": 0,
[2025-07-27 01:10:47]     "exeErrorDiag": "",
[2025-07-27 01:10:47]     "pilotErrorCode": 0,
[2025-07-27 01:10:47]     "pilotErrorDiag": "",
[2025-07-27 01:10:47]  *** Listing of results directory ***
[2025-07-27 01:10:47] total 350852
[2025-07-27 01:10:47] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 18:18 pilot3.tar.gz
[2025-07-27 01:10:47] -rwx------ 1 boincer umatlas     36292 Jul 26 18:33 runpilot2-wrapper.sh
[2025-07-27 01:10:47] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 18:33 queuedata.json
[2025-07-27 01:10:47] -rw-r--r-- 1 boincer umatlas       100 Jul 26 23:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 01:10:47] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 23:46 run_atlas
[2025-07-27 01:10:47] -rw-r--r-- 1 boincer umatlas       105 Jul 26 23:46 job.xml
[2025-07-27 01:10:47] -rw-r--r-- 2 boincer umatlas 145699419 Jul 26 23:46 EVNT.45743347._002539.pool.root.1
[2025-07-27 01:10:47] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 23:46 start_atlas.sh
[2025-07-27 01:10:47] drwxrwx--x 2 boincer umatlas      4096 Jul 26 23:46 shared
[2025-07-27 01:10:47] -rw-r--r-- 2 boincer umatlas    542885 Jul 26 23:46 input.tar.gz
[2025-07-27 01:10:47] -rw-r--r-- 1 boincer umatlas         0 Jul 26 23:46 boinc_lockfile
[2025-07-27 01:10:47] -rw-r--r-- 1 boincer umatlas      2562 Jul 26 23:46 pandaJob.out
[2025-07-27 01:10:47] -rw------- 1 boincer umatlas    980125 Jul 26 23:47 agis_schedconf.cvmfs.json
[2025-07-27 01:10:47] -rw------- 1 boincer umatlas   1593052 Jul 26 23:47 agis_ddmendpoints.agis.ALL.json
[2025-07-27 01:10:47] drwx------ 4 boincer umatlas      4096 Jul 26 23:47 pilot3
[2025-07-27 01:10:47] -rw-r--r-- 1 boincer umatlas      5868 Jul 27 01:02 init_data.xml
[2025-07-27 01:10:47] -rw------- 1 boincer umatlas 208042109 Jul 27 01:09 HITS.45743349._045465.pool.root.1
[2025-07-27 01:10:47] -rw-r--r-- 1 boincer umatlas       530 Jul 27 01:09 boinc_task_state.xml
[2025-07-27 01:10:47] -rw------- 1 boincer umatlas      1051 Jul 27 01:10 memory_monitor_summary.json
[2025-07-27 01:10:47] -rw------- 1 boincer umatlas    353605 Jul 27 01:10 log.45743349._045465.job.log.tgz.1
[2025-07-27 01:10:47] -rw------- 1 boincer umatlas        95 Jul 27 01:10 pilot_heartbeat.json
[2025-07-27 01:10:47] -rw------- 1 boincer umatlas      7858 Jul 27 01:10 heartbeat.json
[2025-07-27 01:10:47] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 01:10 boinc_mmap_file
[2025-07-27 01:10:47] -rw-r--r-- 1 boincer umatlas        27 Jul 27 01:10 wrapper_checkpoint.txt
[2025-07-27 01:10:47] -rw------- 1 boincer umatlas       745 Jul 27 01:10 pilotlog.txt
[2025-07-27 01:10:47] -rw------- 1 boincer umatlas    473492 Jul 27 01:10 log.45743349._045465.job.log.1
[2025-07-27 01:10:47] -rw------- 1 boincer umatlas       357 Jul 27 01:10 output.list
[2025-07-27 01:10:47] -rw-r--r-- 1 boincer umatlas       620 Jul 27 01:10 runtime_log
[2025-07-27 01:10:47] -rw------- 1 boincer umatlas    849920 Jul 27 01:10 result.tar.gz
[2025-07-27 01:10:47] -rw-r--r-- 1 boincer umatlas      8662 Jul 27 01:10 runtime_log.err
[2025-07-27 01:10:47] -rw------- 1 boincer umatlas       659 Jul 27 01:10 E7WLDmld2z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrLTLDmOqZ0Tm.diag
[2025-07-27 01:10:47] -rw-r--r-- 1 boincer umatlas     21922 Jul 27 01:10 stderr.txt
[2025-07-27 01:10:47] HITS file was successfully produced:
[2025-07-27 01:10:47] -rw------- 1 boincer umatlas 208042109 Jul 27 01:09 shared/HITS.pool.root.1
[2025-07-27 01:10:47]  *** Contents of shared directory: ***
[2025-07-27 01:10:47] total 346836
[2025-07-27 01:10:47] -rw-r--r-- 2 boincer umatlas 145699419 Jul 26 23:46 ATLAS.root_0
[2025-07-27 01:10:47] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 23:46 start_atlas.sh
[2025-07-27 01:10:47] -rw-r--r-- 2 boincer umatlas    542885 Jul 26 23:46 input.tar.gz
[2025-07-27 01:10:47] -rw------- 1 boincer umatlas 208042109 Jul 27 01:09 HITS.pool.root.1
[2025-07-27 01:10:47] -rw------- 1 boincer umatlas    849920 Jul 27 01:10 result.tar.gz
01:10:49 (13977): run_atlas exited; CPU time 54248.602819
01:10:49 (13977): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN