Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:36:09 (18815): wrapper (7.7.26015): starting
23:36:09 (18815): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 23:36:09] Arguments: --nthreads 12
[2025-07-26 23:36:09] Threads: 12
[2025-07-26 23:36:09] Checking for CVMFS
[2025-07-26 23:36:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 23:36:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 23:36:09] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 23:36:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 23:36:09] 2.11.2.0 2925 111470 94680 148799 2 57 12184055 20275200 1 130560 0 37776631 99.972 9360586 10330 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 23:36:09] CVMFS is ok
[2025-07-26 23:36:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 23:36:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 23:36:09] Further information can be found at the LHC@home message board.
[2025-07-26 23:36:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 23:36:09] Checking for apptainer binary...
[2025-07-26 23:36:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 23:36:09] Running /usr/bin/apptainer --version
[2025-07-26 23:36:09] apptainer version 1.3.2-1.el7
[2025-07-26 23:36:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 23:36:10] c-205-10.aglt2.org
[2025-07-26 23:36:10] apptainer works
[2025-07-26 23:36:10] Set ATHENA_PROC_NUMBER=12
[2025-07-26 23:36:10] Set ATHENA_CORE_NUMBER=12
[2025-07-26 23:36:10] Starting ATLAS job with PandaID=6745821877
[2025-07-26 23:36:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 01:01:21]  *** The last 200 lines of the pilot log: ***
[2025-07-27 01:01:21]  replicas=None
[2025-07-27 01:01:21]  scope=mc23_13p6TeV
[2025-07-27 01:01:21]  status=None
[2025-07-27 01:01:21]  status_code=0
[2025-07-27 01:01:21]  storage_token=
[2025-07-27 01:01:21]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745821877/log.45758316._000071.job.log.tgz.1
[2025-07-27 01:01:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/b7/log.45758316._000071.job.log.tgz.1
[2025-07-27 01:01:21]  workdir=None
[2025-07-27 01:01:21] ]
[2025-07-27 01:01:21] 2025-07-27 05:00:39,190 | INFO     | transferring file log.45758316._000071.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745821877/log.45758316._000071.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-27 01:01:21] 2025-07-27 05:00:39,190 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745821877/log.45758316._000071.job.log.tgz.1 /tmp/boinchome/slots/0/log.45758316._000071.job
[2025-07-27 01:01:21] 2025-07-27 05:00:39,213 | INFO     | adding to output.list: log.45758316._000071.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/b7/log.45758316._000071.job.log.tg
[2025-07-27 01:01:21] 2025-07-27 05:00:39,214 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 01:01:21] 2025-07-27 05:00:39,214 | INFO     | summary of transferred files:
[2025-07-27 01:01:21] 2025-07-27 05:00:39,214 | INFO     |  -- lfn=log.45758316._000071.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 01:01:21] 2025-07-27 05:00:39,215 | INFO     | stage-out finished correctly
[2025-07-27 01:01:21] 2025-07-27 05:00:41,038 | INFO     | monitor loop #379: job 0:6745821877 is in state 'finished'
[2025-07-27 01:01:21] 2025-07-27 05:00:41,038 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 01:01:21] 2025-07-27 05:00:41,537 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 01:01:21] 2025-07-27 05:00:43,345 | INFO     | PID=22404 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 01:01:21] 2025-07-27 05:00:43,541 | INFO     | monitor loop #380: job 0:6745821877 is in state 'finished'
[2025-07-27 01:01:21] 2025-07-27 05:00:43,541 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 01:01:21] 2025-07-27 05:00:44,133 | INFO     | job 6745821877 has state=finished
[2025-07-27 01:01:21] 2025-07-27 05:00:44,133 | INFO     | preparing for final server update for job 6745821877 in state='finished'
[2025-07-27 01:01:21] 2025-07-27 05:00:44,134 | INFO     | this job has now completed (state=finished)
[2025-07-27 01:01:21] 2025-07-27 05:00:44,134 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 01:01:21] 2025-07-27 05:00:44,134 | INFO     | log transfer has been attempted: DONE
[2025-07-27 01:01:21] 2025-07-27 05:00:44,134 | INFO     | job 6745821877 has finished - writing final server update
[2025-07-27 01:01:21] 2025-07-27 05:00:44,135 | INFO     | total number of processed events: 400 (read)
[2025-07-27 01:01:21] 2025-07-27 05:00:44,135 | INFO     | executing command: lscpu
[2025-07-27 01:01:21] 2025-07-27 05:00:44,161 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 01:01:21] 2025-07-27 05:00:46,045 | INFO     | monitor loop #381: job 0:6745821877 is in state 'finished'
[2025-07-27 01:01:21] 2025-07-27 05:00:46,045 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 01:01:21] 2025-07-27 05:00:48,548 | INFO     | monitor loop #382: job 0:6745821877 is in state 'finished'
[2025-07-27 01:01:21] 2025-07-27 05:00:48,548 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 01:01:21] 2025-07-27 05:00:48,885 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-27 01:01:21] 2025-07-27 05:00:48,887 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1773.4166666666667
[2025-07-27 01:01:21] 2025-07-27 05:00:48,889 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745821877/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 01:01:21] 2025-07-27 05:00:48,890 | INFO     | extracted standard info from prmon json
[2025-07-27 01:01:21] 2025-07-27 05:00:48,890 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 01:01:21] 2025-07-27 05:00:48,890 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 01:01:21] 2025-07-27 05:00:48,890 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 01:01:21] 2025-07-27 05:00:48,890 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 01:01:21] 2025-07-27 05:00:48,892 | INFO     | fitting pss+swap vs Time
[2025-07-27 01:01:21] 2025-07-27 05:00:48,892 | INFO     | sum of square deviations: 136095575.0
[2025-07-27 01:01:21] 2025-07-27 05:00:48,893 | INFO     | sum of deviations: -9469465235.0
[2025-07-27 01:01:21] 2025-07-27 05:00:48,893 | INFO     | mean x: 1753590007.5
[2025-07-27 01:01:21] 2025-07-27 05:00:48,893 | INFO     | mean y: 2801246.3947368423
[2025-07-27 01:01:21] 2025-07-27 05:00:48,893 | INFO     | -- intersect: 122016758073.90099
[2025-07-27 01:01:21] 2025-07-27 05:00:48,893 | INFO     | intersect: 122016758073.90099
[2025-07-27 01:01:21] 2025-07-27 05:00:48,893 | INFO     | chi2: 0.08938451819140449
[2025-07-27 01:01:21] 2025-07-27 05:00:48,893 | INFO     | -- intersect: 122016758073.90099
[2025-07-27 01:01:21] 2025-07-27 05:00:48,894 | INFO     | current memory leak: -69.58 B/s (using 76 data points, chi2=0.09)
[2025-07-27 01:01:21] 2025-07-27 05:00:48,894 | INFO     | could have reported an average CPU frequency of 2058 MHz (6 samples)
[2025-07-27 01:01:21] 2025-07-27 05:00:48,894 | INFO     | ..............................
[2025-07-27 01:01:21] 2025-07-27 05:00:48,894 | INFO     | . Timing measurements:
[2025-07-27 01:01:21] 2025-07-27 05:00:48,894 | INFO     | . get job = 0 s
[2025-07-27 01:01:21] 2025-07-27 05:00:48,894 | INFO     | . initial setup = 2 s
[2025-07-27 01:01:21] 2025-07-27 05:00:48,894 | INFO     | . payload setup = 9 s
[2025-07-27 01:01:21] 2025-07-27 05:00:48,894 | INFO     | . stage-in = 0 s
[2025-07-27 01:01:21] 2025-07-27 05:00:48,895 | INFO     | . payload execution = 5025 s
[2025-07-27 01:01:21] 2025-07-27 05:00:48,895 | INFO     | . stage-out = 0 s
[2025-07-27 01:01:21] 2025-07-27 05:00:48,895 | INFO     | . log creation = 0 s
[2025-07-27 01:01:21] 2025-07-27 05:00:48,895 | INFO     | ..............................
[2025-07-27 01:01:21] 2025-07-27 05:00:48,979 | INFO     | 
[2025-07-27 01:01:21] 2025-07-27 05:00:48,979 | INFO     | job summary report
[2025-07-27 01:01:21] 2025-07-27 05:00:48,979 | INFO     | --------------------------------------------------
[2025-07-27 01:01:21] 2025-07-27 05:00:48,980 | INFO     | PanDA job id: 6745821877
[2025-07-27 01:01:21] 2025-07-27 05:00:48,980 | INFO     | task id: 45758316
[2025-07-27 01:01:21] 2025-07-27 05:00:48,980 | INFO     | errors: (none)
[2025-07-27 01:01:21] 2025-07-27 05:00:48,980 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 01:01:21] 2025-07-27 05:00:48,980 | INFO     | pilot state: finished 
[2025-07-27 01:01:21] 2025-07-27 05:00:48,980 | INFO     | transexitcode: 0
[2025-07-27 01:01:21] 2025-07-27 05:00:48,981 | INFO     | exeerrorcode: 0
[2025-07-27 01:01:21] 2025-07-27 05:00:48,981 | INFO     | exeerrordiag: 
[2025-07-27 01:01:21] 2025-07-27 05:00:48,981 | INFO     | exitcode: 0
[2025-07-27 01:01:21] 2025-07-27 05:00:48,981 | INFO     | exitmsg: OK
[2025-07-27 01:01:21] 2025-07-27 05:00:48,981 | INFO     | cpuconsumptiontime: 54475 s
[2025-07-27 01:01:21] 2025-07-27 05:00:48,981 | INFO     | nevents: 400
[2025-07-27 01:01:21] 2025-07-27 05:00:48,982 | INFO     | neventsw: 0
[2025-07-27 01:01:21] 2025-07-27 05:00:48,982 | INFO     | pid: 28822
[2025-07-27 01:01:21] 2025-07-27 05:00:48,982 | INFO     | pgrp: 28822
[2025-07-27 01:01:21] 2025-07-27 05:00:48,982 | INFO     | corecount: 12
[2025-07-27 01:01:21] 2025-07-27 05:00:48,982 | INFO     | event service: False
[2025-07-27 01:01:21] 2025-07-27 05:00:48,982 | INFO     | sizes: {0: 2397305, 1: 2397504, 6: 2397766, 11: 2397794, 5038: 2424061, 5039: 2433059, 5042: 2433243, 5049: 2433437}
[2025-07-27 01:01:21] 2025-07-27 05:00:48,982 | INFO     | --------------------------------------------------
[2025-07-27 01:01:21] 2025-07-27 05:00:48,983 | INFO     | 
[2025-07-27 01:01:21] 2025-07-27 05:00:48,983 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-27 01:01:21] 2025-07-27 05:00:49,009 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 01:01:21] 2025-07-27 05:00:49,009 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 01:01:21] 2025-07-27 05:00:49,009 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 01:01:21] 2025-07-27 05:00:49,010 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 01:01:21] 2025-07-27 05:00:49,010 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 01:01:21] 2025-07-27 05:00:49,010 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 01:01:21] 2025-07-27 05:00:49,010 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 01:01:21] 2025-07-27 05:00:49,010 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 01:01:21] 2025-07-27 05:00:49,010 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 01:01:21] 2025-07-27 05:00:49,011 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 01:01:21] 2025-07-27 05:00:49,011 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 01:01:21] 2025-07-27 05:00:49,011 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 01:01:21] 2025-07-27 05:00:49,011 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 01:01:21] 2025-07-27 05:00:49,011 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 01:01:21] 2025-07-27 05:00:49,011 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 01:01:21] 2025-07-27 05:00:49,012 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 01:01:21] 2025-07-27 05:00:49,012 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 01:01:21] 2025-07-27 05:00:49,012 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 01:01:21] 2025-07-27 05:00:49,012 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 01:01:21] 2025-07-27 05:00:49,012 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 01:01:21] 2025-07-27 05:00:49,013 | INFO     | job 6745821877 has completed (purged errors)
[2025-07-27 01:01:21] 2025-07-27 05:00:49,013 | INFO     | overall cleanup function is called
[2025-07-27 01:01:21] 2025-07-27 05:00:50,021 | INFO     | --- collectZombieJob: --- 10, [28822]
[2025-07-27 01:01:21] 2025-07-27 05:00:50,021 | INFO     | zombie collector waiting for pid 28822
[2025-07-27 01:01:21] 2025-07-27 05:00:50,021 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 01:01:21] 2025-07-27 05:00:50,021 | INFO     | collected zombie processes
[2025-07-27 01:01:21] 2025-07-27 05:00:50,021 | INFO     | will attempt to kill all subprocesses of pid=28822
[2025-07-27 01:01:21] 2025-07-27 05:00:50,119 | INFO     | process IDs to be killed: [28822] (in reverse order)
[2025-07-27 01:01:21] 2025-07-27 05:00:50,171 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 01:01:21] 2025-07-27 05:00:50,178 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 01:01:21] 2025-07-27 05:00:50,181 | INFO     | did not find any defunct processes belonging to 28822
[2025-07-27 01:01:21] 2025-07-27 05:00:50,184 | INFO     | did not find any defunct processes belonging to 28822
[2025-07-27 01:01:21] 2025-07-27 05:00:50,184 | INFO     | ready for new job
[2025-07-27 01:01:21] 2025-07-27 05:00:50,184 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 01:01:21] 2025-07-27 05:00:50,186 | INFO     | ***************************************
[2025-07-27 01:01:21] 2025-07-27 05:00:50,186 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 01:01:21] 2025-07-27 05:00:50,186 | INFO     | ***************************************
[2025-07-27 01:01:21] 2025-07-27 05:00:50,186 | INFO     | 
[2025-07-27 01:01:21] 2025-07-27 05:00:50,186 | INFO     | architecture information:
[2025-07-27 01:01:21] 2025-07-27 05:00:50,187 | INFO     | executing command: cat /etc/os-release
[2025-07-27 01:01:21] 2025-07-27 05:00:50,202 | INFO     | cat /etc/os-release:
[2025-07-27 01:01:21] NAME="CentOS Linux"
[2025-07-27 01:01:21] VERSION="7 (Core)"
[2025-07-27 01:01:21] ID="centos"
[2025-07-27 01:01:21] ID_LIKE="rhel fedora"
[2025-07-27 01:01:21] VERSION_ID="7"
[2025-07-27 01:01:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 01:01:21] ANSI_COLOR="0;31"
[2025-07-27 01:01:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 01:01:21] HOME_URL="https://www.centos.org/"
[2025-07-27 01:01:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 01:01:21] 
[2025-07-27 01:01:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 01:01:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 01:01:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 01:01:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 01:01:21] 
[2025-07-27 01:01:21] 2025-07-27 05:00:50,202 | INFO     | ***************************************
[2025-07-27 01:01:21] 2025-07-27 05:00:50,705 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-27 01:01:21] 2025-07-27 05:00:50,722 | INFO     | sufficient remaining disk space (29365370880 B)
[2025-07-27 01:01:21] 2025-07-27 05:00:50,722 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 01:01:21] 2025-07-27 05:00:50,723 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 01:01:21] 2025-07-27 05:00:50,723 | INFO     | update_server=False
[2025-07-27 01:01:21] 2025-07-27 05:00:50,723 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 01:01:21] 2025-07-27 05:00:50,723 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 01:01:21] 2025-07-27 05:00:50,724 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 01:01:21] 2025-07-27 05:00:50,730 | INFO     | all payload control threads have been joined
[2025-07-27 01:01:21] 2025-07-27 05:00:50,855 | INFO     | all job control threads have been joined
[2025-07-27 01:01:21] 2025-07-27 05:00:51,051 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 01:01:21] 2025-07-27 05:00:51,051 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 01:01:21] 2025-07-27 05:00:51,051 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 01:01:21] 2025-07-27 05:00:51,052 | INFO     | will abort loop
[2025-07-27 01:01:21] 2025-07-27 05:00:51,579 | INFO     | all data control threads have been joined
[2025-07-27 01:01:21] 2025-07-27 05:00:51,724 | INFO     | [job] retrieve thread has finished
[2025-07-27 01:01:21] 2025-07-27 05:00:51,729 | INFO     | [job] queue monitor thread has finished
[2025-07-27 01:01:21] 2025-07-27 05:00:51,735 | INFO     | [payload] control thread has finished
[2025-07-27 01:01:21] 2025-07-27 05:00:51,823 | INFO     | [payload] validate_post thread has finished
[2025-07-27 01:01:21] 2025-07-27 05:00:51,846 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 01:01:21] 2025-07-27 05:00:51,850 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 01:01:21] 2025-07-27 05:00:51,860 | INFO     | [job] control thread has finished
[2025-07-27 01:01:21] 2025-07-27 05:00:52,057 | INFO     | [job] job monitor thread has finished
[2025-07-27 01:01:21] 2025-07-27 05:00:52,109 | INFO     | [data] copytool_in thread has finished
[2025-07-27 01:01:21] 2025-07-27 05:00:52,127 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 01:01:21] 2025-07-27 05:00:52,227 | INFO     | [payload] failed_post thread has finished
[2025-07-27 01:01:21] 2025-07-27 05:00:52,445 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 01:01:21] 2025-07-27 05:00:52,584 | INFO     | [data] control thread has finished
[2025-07-27 01:01:21] 2025-07-27 05:00:52,729 | INFO     | [data] copytool_out thread has finished
[2025-07-27 01:01:21] 2025-07-27 05:00:52,970 | INFO     | [job] validate thread has finished
[2025-07-27 01:01:21] 2025-07-27 05:00:56,133 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 01:01:21] 2025-07-27 05:01:00,863 | INFO     | job.realtimelogging is not enabled
[2025-07-27 01:01:21] 2025-07-27 05:01:01,865 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 01:01:21] 2025-07-27 05:01:02,939 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140076033607488)>', '<ExcThread(monitor, started 140075417446144)>']
[2025-07-27 01:01:21] 2025-07-27 05:01:07,964 | INFO     | all workflow threads have been joined
[2025-07-27 01:01:21] 2025-07-27 05:01:07,964 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 01:01:21] 2025-07-27 05:01:07,965 | INFO     | traces error code: 0
[2025-07-27 01:01:21] 2025-07-27 05:01:07,965 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 01:01:21] 2025-07-27 05:01:21,570 | INFO     | PID=22404 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 01:01:21] 2025-07-27 05:01:21,570 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 01:01:21] 2025-07-27 05:01:21,570 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 01:01:21] 2025-07-27 05:01:21,570 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 01:01:21] 2025-07-27 05:01:21,570 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 01:01:21] 2025-07-27 05:01:21,570 | INFO     | [monitor] control thread has ended
[2025-07-27 01:01:21] 2025-07-27 05:01:21,663 [wrapper] ==== pilot stdout END ====
[2025-07-27 01:01:21] 2025-07-27 05:01:21,667 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 01:01:21] 2025-07-27 05:01:21,671 [wrapper] pilotpid: 22404
[2025-07-27 01:01:21] 2025-07-27 05:01:21,675 [wrapper] Pilot exit status: 0
[2025-07-27 01:01:21] 2025-07-27 05:01:21,689 [wrapper] pandaids: 6745821877
[2025-07-27 01:01:21] 2025-07-27 05:01:21,730 [wrapper] cleanup supervisor_pilot 18747 22405
[2025-07-27 01:01:21] 2025-07-27 05:01:21,734 [wrapper] Test setup, not cleaning
[2025-07-27 01:01:21] 2025-07-27 05:01:21,738 [wrapper] apfmon messages muted
[2025-07-27 01:01:21] 2025-07-27 05:01:21,742 [wrapper] ==== wrapper stdout END ====
[2025-07-27 01:01:21] 2025-07-27 05:01:21,745 [wrapper] ==== wrapper stderr END ====
[2025-07-27 01:01:21]  *** Error codes and diagnostics ***
[2025-07-27 01:01:21]     "exeErrorCode": 0,
[2025-07-27 01:01:21]     "exeErrorDiag": "",
[2025-07-27 01:01:21]     "pilotErrorCode": 0,
[2025-07-27 01:01:21]     "pilotErrorDiag": "",
[2025-07-27 01:01:21]  *** Listing of results directory ***
[2025-07-27 01:01:21] total 408888
[2025-07-27 01:01:21] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 17:42 pilot3.tar.gz
[2025-07-27 01:01:21] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 18:00 queuedata.json
[2025-07-27 01:01:21] -rwx------ 1 boincer umatlas     36292 Jul 26 18:00 runpilot2-wrapper.sh
[2025-07-27 01:01:21] -rw-r--r-- 1 boincer umatlas       100 Jul 26 23:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 01:01:21] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 23:36 run_atlas
[2025-07-27 01:01:21] -rw-r--r-- 1 boincer umatlas       105 Jul 26 23:36 job.xml
[2025-07-27 01:01:21] -rw-r--r-- 2 boincer umatlas 240642478 Jul 26 23:36 EVNT.45758314._000003.pool.root.1
[2025-07-27 01:01:21] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 23:36 start_atlas.sh
[2025-07-27 01:01:21] drwxrwx--x 2 boincer umatlas      4096 Jul 26 23:36 shared
[2025-07-27 01:01:21] -rw-r--r-- 2 boincer umatlas    542889 Jul 26 23:36 input.tar.gz
[2025-07-27 01:01:21] -rw-r--r-- 1 boincer umatlas         0 Jul 26 23:36 boinc_lockfile
[2025-07-27 01:01:21] -rw-r--r-- 1 boincer umatlas      2569 Jul 26 23:36 pandaJob.out
[2025-07-27 01:01:21] -rw------- 1 boincer umatlas    980125 Jul 26 23:36 agis_schedconf.cvmfs.json
[2025-07-27 01:01:21] -rw------- 1 boincer umatlas   1593052 Jul 26 23:36 agis_ddmendpoints.agis.ALL.json
[2025-07-27 01:01:21] drwx------ 4 boincer umatlas      4096 Jul 26 23:36 pilot3
[2025-07-27 01:01:21] -rw-r--r-- 1 boincer umatlas      5868 Jul 27 00:54 init_data.xml
[2025-07-27 01:01:21] -rw------- 1 boincer umatlas 172464147 Jul 27 01:00 HITS.45758316._000071.pool.root.1
[2025-07-27 01:01:21] -rw-r--r-- 1 boincer umatlas       529 Jul 27 01:00 boinc_task_state.xml
[2025-07-27 01:01:21] -rw------- 1 boincer umatlas        95 Jul 27 01:00 pilot_heartbeat.json
[2025-07-27 01:01:21] -rw------- 1 boincer umatlas      1051 Jul 27 01:00 memory_monitor_summary.json
[2025-07-27 01:01:21] -rw------- 1 boincer umatlas    377733 Jul 27 01:00 log.45758316._000071.job.log.tgz.1
[2025-07-27 01:01:21] -rw------- 1 boincer umatlas      7844 Jul 27 01:00 heartbeat.json
[2025-07-27 01:01:21] -rw-r--r-- 1 boincer umatlas      8192 Jul 27 01:01 boinc_mmap_file
[2025-07-27 01:01:21] -rw-r--r-- 1 boincer umatlas        27 Jul 27 01:01 wrapper_checkpoint.txt
[2025-07-27 01:01:21] -rw------- 1 boincer umatlas       745 Jul 27 01:01 pilotlog.txt
[2025-07-27 01:01:21] -rw------- 1 boincer umatlas    481285 Jul 27 01:01 log.45758316._000071.job.log.1
[2025-07-27 01:01:21] -rw------- 1 boincer umatlas       357 Jul 27 01:01 output.list
[2025-07-27 01:01:21] -rw-r--r-- 1 boincer umatlas       620 Jul 27 01:01 runtime_log
[2025-07-27 01:01:21] -rw------- 1 boincer umatlas    880640 Jul 27 01:01 result.tar.gz
[2025-07-27 01:01:21] -rw------- 1 boincer umatlas       659 Jul 27 01:01 YOgNDmQ71z7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyHTLDmbDR62m.diag
[2025-07-27 01:01:21] -rw-r--r-- 1 boincer umatlas      8662 Jul 27 01:01 runtime_log.err
[2025-07-27 01:01:21] -rw-r--r-- 1 boincer umatlas     21964 Jul 27 01:01 stderr.txt
[2025-07-27 01:01:21] HITS file was successfully produced:
[2025-07-27 01:01:21] -rw------- 1 boincer umatlas 172464147 Jul 27 01:00 shared/HITS.pool.root.1
[2025-07-27 01:01:21]  *** Contents of shared directory: ***
[2025-07-27 01:01:21] total 404840
[2025-07-27 01:01:21] -rw-r--r-- 2 boincer umatlas 240642478 Jul 26 23:36 ATLAS.root_0
[2025-07-27 01:01:21] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 23:36 start_atlas.sh
[2025-07-27 01:01:21] -rw-r--r-- 2 boincer umatlas    542889 Jul 26 23:36 input.tar.gz
[2025-07-27 01:01:21] -rw------- 1 boincer umatlas 172464147 Jul 27 01:00 HITS.pool.root.1
[2025-07-27 01:01:21] -rw------- 1 boincer umatlas    880640 Jul 27 01:01 result.tar.gz
01:01:23 (18815): run_atlas exited; CPU time 54373.133201
01:01:23 (18815): called boinc_finish(0)

</stderr_txt>
]]>

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